Fri, 23 Nov 2007

Package spam updated to version 0.13 with previous version 0.12 dated 2007-09-30
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New package SoDA with initial version 0.96
Package: SoDA
Type: Package
Title: Software for Data Analysis
Version: 0.96
Date: 2007-09-20
Depends:R(>= 2.4),methods,graphics
Author:  John M Chambers
Maintainer:  
Description: Utilities and examples from the book 
	     "Software for Data Analysis: Programming with R".
License: GPL version 2 or later.
LazyLoad: yes
LazyData: yes
Packaged: Thu Nov 22 11:10:44 2007; jmc

More information about SoDA at CRAN
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Package rrcov updated to version 0.4-03 with previous version 0.4-01 dated 2007-09-30
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Package RHmm updated to version 1.0.1 with previous version 1.0.0 dated 2007-11-20
Diff between RHmm versions 1.0.0 dated 2007-11-20 and 1.0.1 dated 2007-11-23
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Package relaimpo updated to version 2.0 with previous version 1.2-2 dated 2007-10-01
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Package party updated to version 0.9-92 with previous version 0.9-91 dated 2007-09-27
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New package ltsa with initial version 1.0
Package: ltsa
Version: 1.0
Date: 2007-09-01
Title: Linear time series analysis
Author: A.I. McLeod, Hao Yu, Zinovi Krougly
Maintainer: A.I. McLeod 
Depends: R (>= 2.1.0)
Suggests: FGN
Description: Methods of developing linear time series modelling.  Methods are given for loglikelihood computation, forecasting and simulation.
License: GPL (version 2 or later)
URL: http://www.stats.uwo.ca/faculty/aim
Packaged: Tue Oct 30 12:55:48 2007; aim

More information about ltsa at CRAN
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Package geoR updated to version 1.6-19 with previous version 1.6-17 dated 2007-10-04
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Package fmri updated to version 1.2-3 with previous version 1.2-2 dated 2007-09-10
Diff between fmri versions 1.2-2 dated 2007-09-10 and 1.2-3 dated 2007-11-23
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New package FGN with initial version 1.0
Package: FGN
Version: 1.0
Date: 2007-09-17
Title:  Fractional Gaussian Noise Model Fitting
Author: A.I. McLeod 
Maintainer: A.I. McLeod 
Depends: R (>= 2.1.0), ltsa
Description: MLE for H parameter in FGN; MLE for regression with FGN error; simulation of FGN
License: GPL (version 2 or later)
URL: http://www.stats.uwo.ca/faculty/aim
Packaged: Thu Oct 18 17:04:07 2007; aim

More information about FGN at CRAN
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Package ArDec updated to version 1.1-3 with previous version 1.1-1 dated 2007-07-13
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Package adimpro updated to version 0.4.4 with previous version 0.4.3 dated 2007-04-17
Diff between adimpro versions 0.4.3 dated 2007-04-17 and 0.4.4 dated 2007-11-23
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