Author: Ramon Diaz-Uriarte
Diff between varSelRF versions 0.6-5 dated 2008-04-17 and 0.7-1 dated 2009-03-03
Title: Variable selection using random forests
Description: Variable selection from random forests
using both backwards variable elimination (for the selection of
small sets of non-redundant variables) and selection based on the
importance spectrum (somewhat similar to scree plots; for the
selection of large, potentially highly-correlated variables).
Main applications in high-dimensional data
(e.g., microarray data, and other genomics and proteomics
applications). You can use rpvm instead of Rmpi if you want
but I've only tested with Rmpi.
Changes | 6 +++
DESCRIPTION | 10 ++---
R/varSelRF.R | 76 ++++++++++++++++++++++++++------------------
TO-DO |only
man/basicClusterInit.Rd | 2 -
man/plot.varSelRF.Rd | 11 +++---
man/plot.varSelRFBoot.Rd | 6 +--
man/randomVarImpsRF.Rd | 2 -
man/randomVarImpsRFplot.Rd | 11 ++----
man/selProbPlot.Rd | 2 -
man/summary.varSelRFBoot.Rd | 5 +-
man/varSelImpSpecRF.Rd | 2 -
man/varSelRF.Rd | 4 +-
man/varSelRFBoot.Rd | 8 ++--
14 files changed, 82 insertions(+), 63 deletions(-)
Author: Hans Bruun Nielsen and Stig Bousgaard Mortensen
Title: General-purpose unconstrained non-linear optimization
Description: An algorithm for general-purpose unconstrained non-linear optimization.
The algorithm is of quasi-Newton type with BFGS updating of the inverse
Hessian and soft line search with a trust region type monitoring of the
input to the line search algorithm. The interface of 'ucminf' is
designed for easy interchange with 'optim'.
Diff between ucminf versions 1.0-3 dated 2009-02-24 and 1.0-4 dated 2009-03-03
DESCRIPTION | 6 +++--- R/ucminf.R | 11 ++++++----- man/ucminf.Rd | 4 ---- 3 files changed, 9 insertions(+), 12 deletions(-)
Author: Daniel P Gaile
Diff between sendplot versions 2.1.2 dated 2009-01-26 and 3.0.0 dated 2009-03-03
Title: Tool for sending interactive plots with tool-tip content.
Description: A tool for visualizing data
sendplot-2.1.2/sendplot/R/getPlotsBounds.R |only
sendplot-2.1.2/sendplot/inst/doc/FirstLookEx.png |only
sendplot-2.1.2/sendplot/inst/doc/Oldsendplot.tex |only
sendplot-2.1.2/sendplot/inst/doc/exHeat.html |only
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sendplot-2.1.2/sendplot/inst/doc/exHeat.tif |only
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sendplot-2.1.2/sendplot/inst/doc/exHeatDot.tif |only
sendplot-2.1.2/sendplot/inst/doc/exPlotImage.html |only
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sendplot-2.1.2/sendplot/inst/doc/exPlotImage.tif |only
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sendplot-2.1.2/sendplot/inst/doc/exPlotXY.tif |only
sendplot-2.1.2/sendplot/inst/doc/exPlotXYDot.png |only
sendplot-2.1.2/sendplot/inst/doc/exPlotXYDot.tif |only
sendplot-2.1.2/sendplot/inst/doc/heatmapSendPlot.html |only
sendplot-2.1.2/sendplot/inst/doc/heatmapSendPlot.png |only
sendplot-2.1.2/sendplot/inst/doc/heatmapSendPlot.ps |only
sendplot-2.1.2/sendplot/inst/doc/image.png |only
sendplot-2.1.2/sendplot/inst/doc/image.ps |only
sendplot-2.1.2/sendplot/inst/doc/sendPlotEx.html |only
sendplot-2.1.2/sendplot/inst/doc/sendPlotEx.png |only
sendplot-2.1.2/sendplot/inst/doc/sendPlotEx.tif |only
sendplot-2.1.2/sendplot/inst/doc/sendPlotExDot.png |only
sendplot-2.1.2/sendplot/inst/doc/sendPlotExDot.tif |only
sendplot-2.1.2/sendplot/inst/doc/sendplot.aux |only
sendplot-2.1.2/sendplot/inst/doc/sendplot.log |only
sendplot-2.1.2/sendplot/inst/doc/sendplot.tex |only
sendplot-2.1.2/sendplot/inst/doc/sendplot.toc |only
sendplot-2.1.2/sendplot/inst/doc/test.html |only
sendplot-2.1.2/sendplot/inst/doc/test.png |only
sendplot-2.1.2/sendplot/inst/doc/test.ps |only
sendplot-2.1.2/sendplot/inst/doc/testImg.html |only
sendplot-2.1.2/sendplot/inst/doc/testImg.png |only
sendplot-2.1.2/sendplot/inst/doc/testImg.ps |only
sendplot-2.1.2/sendplot/inst/doc/testXY.html |only
sendplot-2.1.2/sendplot/inst/doc/testXY.png |only
sendplot-2.1.2/sendplot/inst/doc/testXY.ps |only
sendplot-2.1.2/sendplot/man/getPlotsBounds.Rd |only
sendplot-3.0.0/sendplot/DESCRIPTION | 7 +-
sendplot-3.0.0/sendplot/R/addBounding.R | 2
sendplot-3.0.0/sendplot/R/automapPts.R | 13 +++-
sendplot-3.0.0/sendplot/R/heatmap.send.R | 2
sendplot-3.0.0/sendplot/R/initSplot.R | 2
sendplot-3.0.0/sendplot/R/makeImageDF.R | 2
sendplot-3.0.0/sendplot/R/makeSplot.R | 48 +++++++++++++++---
sendplot-3.0.0/sendplot/R/mapMethod.R | 2
sendplot-3.0.0/sendplot/R/sendplot.R | 5 +
sendplot-3.0.0/sendplot/R/writeDefault.R | 12 ++--
sendplot-3.0.0/sendplot/inst/doc/Oldsendplot.pdf |binary
sendplot-3.0.0/sendplot/inst/doc/sendplot.R | 2
sendplot-3.0.0/sendplot/inst/doc/sendplot.Rnw | 5 +
sendplot-3.0.0/sendplot/inst/doc/sendplot.dvi |binary
sendplot-3.0.0/sendplot/inst/doc/sendplot.pdf |binary
sendplot-3.0.0/sendplot/man/HeatmapWrapper.Rd | 6 +-
sendplot-3.0.0/sendplot/man/aCGHex.Rd | 4 -
sendplot-3.0.0/sendplot/man/addDefault.Rd | 4 -
sendplot-3.0.0/sendplot/man/heatmap.send.Rd | 6 +-
sendplot-3.0.0/sendplot/man/imagesend.Rd | 6 +-
sendplot-3.0.0/sendplot/man/initSplot.Rd | 6 +-
sendplot-3.0.0/sendplot/man/makeImageDF.Rd | 6 +-
sendplot-3.0.0/sendplot/man/makePolyDF.Rd | 6 +-
sendplot-3.0.0/sendplot/man/makeRectDF.Rd | 6 +-
sendplot-3.0.0/sendplot/man/makeScatterDF.Rd | 6 +-
sendplot-3.0.0/sendplot/man/makeSplot.Rd | 6 +-
sendplot-3.0.0/sendplot/man/sendimage.Rd | 4 -
sendplot-3.0.0/sendplot/man/sendplot-package.Rd | 6 +-
sendplot-3.0.0/sendplot/man/sendplot.Rd | 6 +-
sendplot-3.0.0/sendplot/man/sendxy.Rd | 4 -
sendplot-3.0.0/sendplot/man/sp.header.Rd | 4 -
sendplot-3.0.0/sendplot/man/writeArea.Rd | 4 -
sendplot-3.0.0/sendplot/man/writeDefault.Rd | 4 -
sendplot-3.0.0/sendplot/man/writeToHTML.Rd | 4 -
sendplot-3.0.0/sendplot/man/xy.send.Rd | 4 -
77 files changed, 124 insertions(+), 80 deletions(-)
Author: Graham Williams
Diff between rattle versions 2.4.0 dated 2009-01-04 and 2.4.40 dated 2009-03-03
Title: A graphical user interface for data mining in R using GTK
Description: Rattle (the R Analytic Tool To Learn Easily) provides a
Gnome (RGtk2) based interface to R functionality for data mining.
The aim is to provide a simple and intuitive interface
that allows a user to quickly load data from a CSV file
(or via ODBC), transform and explore the data,
build and evaluate models, and export models as PMML (predictive
modelling markup language) or as scores. All of this with knowing little
about R. All R commands are logged and commented through the log tab
and so available to the user as a script file or as an aide to the user to
interact directly with R itself. Rattle also exports a number of utility
functions and the graphical user interface, invoked as rattle(), does
not need to be run to deploy these.
rattle-2.4.0/rattle/man/RStat.Rd |only
rattle-2.4.0/rattle/man/write.rstat.Rd |only
rattle-2.4.40/rattle/DESCRIPTION | 6
rattle-2.4.40/rattle/NAMESPACE | 5
rattle-2.4.40/rattle/R/ada.R | 6
rattle-2.4.40/rattle/R/associate.R | 7
rattle-2.4.40/rattle/R/cluster.R | 4
rattle-2.4.40/rattle/R/ctree.R | 2
rattle-2.4.40/rattle/R/data.R | 155 -
rattle-2.4.40/rattle/R/evaluate.R | 398 ---
rattle-2.4.40/rattle/R/export.R | 149 +
rattle-2.4.40/rattle/R/hclust.R | 60
rattle-2.4.40/rattle/R/help.R | 409 ++-
rattle-2.4.40/rattle/R/kmeans.R | 41
rattle-2.4.40/rattle/R/log.R | 15
rattle-2.4.40/rattle/R/model.R | 217 -
rattle-2.4.40/rattle/R/nnet.R | 7
rattle-2.4.40/rattle/R/projects.R | 94
rattle-2.4.40/rattle/R/random_forest.R | 32
rattle-2.4.40/rattle/R/rattle.R | 2076 +++----------------
rattle-2.4.40/rattle/R/rpart.R | 74
rattle-2.4.40/rattle/R/test.R | 183 +
rattle-2.4.40/rattle/R/textminer.R | 4
rattle-2.4.40/rattle/R/textview.R | 67
rattle-2.4.40/rattle/R/tooltips.R |only
rattle-2.4.40/rattle/R/transform.R |only
rattle-2.4.40/rattle/R/zzz.R | 68
rattle-2.4.40/rattle/data/weather.RData |binary
rattle-2.4.40/rattle/inst/arff/weather.arff | 16
rattle-2.4.40/rattle/inst/csv/weather.csv | 16
rattle-2.4.40/rattle/inst/etc/rattle.glade | 1587 +++++++-------
rattle-2.4.40/rattle/inst/etc/textviews.xml |only
rattle-2.4.40/rattle/inst/etc/tooltips.xml |only
rattle-2.4.40/rattle/man/internal.Rd | 18
rattle-2.4.40/rattle/man/overwritePackageFunction.Rd |only
rattle-2.4.40/rattle/man/rattle.Rd | 5
rattle-2.4.40/rattle/man/weather.Rd | 89
37 files changed, 2377 insertions(+), 3433 deletions(-)
Author: Graham Williams, Michael Hahsler (arules), Zementis Inc,
Hemant Ishwaran, Udaya B. Kogalur, Rajarshi Guha
Title: Generate PMML for various models
Description: The Predictive Modelling Markup Language (PMML) is a language
for representing models, in an application independent way. Such models
can then be loaded into other applications supporting PMML, including
ADAPA from Zementis, Teradata Warehouse Miner and IBM's DB2.
The package provides a generic pmml function to generate pmml for an
object. Using a S3 generic function the approriate method for the
class of the supplied object is dispatched.
The package currently supports the export of PMML for linear
regression, SVMs, rpart classification trees,
randomSurvivalForest forest models, and kmeans clusters.
This package is part of the Rattle toolkit.
Diff between pmml versions 1.2.0 dated 2009-01-05 and 1.2.8 dated 2009-03-03
DESCRIPTION | 6 +- NAMESPACE | 2 R/pmml.R | 155 ++++++++++++++++++++++++++++++++++++++++++++++++++++-- R/pmml.hclust.R | 14 ++-- R/pmml.kmeans.R | 13 ++-- R/pmml.lm.R | 52 ++++++++++-------- R/pmml.multinom.R | 39 +++++++++---- R/pmml.rpart.R | 63 ++++++++++++++++----- R/pmmltoc.R |only man/pmmltoc.Rd |only 10 files changed, 273 insertions(+), 71 deletions(-)
Author: Simon Wood
Diff between mgcv versions 1.4-2 dated 2009-02-13 and 1.5-0 dated 2009-03-03
Title: GAMs with GCV/AIC/REML smoothness estimation and GAMMs by PQL
Description: Routines for GAMs and other generalized ridge regression
with multiple smoothing parameter selection by GCV, REML
or UBRE/AIC. Also GAMMs by REML or PQL. Includes a gam()
function.
mgcv-1.4-2/mgcv/man/gam.method.Rd |only
mgcv-1.5-0/mgcv/DESCRIPTION | 10
mgcv-1.5-0/mgcv/NAMESPACE | 11
mgcv-1.5-0/mgcv/R/gam.fit3.r | 1307 +++++-
mgcv-1.5-0/mgcv/R/gam.sim.r | 7
mgcv-1.5-0/mgcv/R/gamm.r | 4
mgcv-1.5-0/mgcv/R/mgcv.r | 830 ++--
mgcv-1.5-0/mgcv/R/smooth.r | 328 +
mgcv-1.5-0/mgcv/changeLog | 103
mgcv-1.5-0/mgcv/inst/CITATION | 2
mgcv-1.5-0/mgcv/man/Tweedie.Rd |only
mgcv-1.5-0/mgcv/man/anova.gam.Rd | 13
mgcv-1.5-0/mgcv/man/choose.k.Rd | 8
mgcv-1.5-0/mgcv/man/fix.family.link.Rd | 31
mgcv-1.5-0/mgcv/man/formula.gam.Rd | 2
mgcv-1.5-0/mgcv/man/full.score.Rd | 2
mgcv-1.5-0/mgcv/man/gam.Rd | 96
mgcv-1.5-0/mgcv/man/gam.control.Rd | 9
mgcv-1.5-0/mgcv/man/gam.convergence.Rd | 23
mgcv-1.5-0/mgcv/man/gam.fit3.Rd | 39
mgcv-1.5-0/mgcv/man/gam.models.Rd | 27
mgcv-1.5-0/mgcv/man/gam.outer.Rd | 19
mgcv-1.5-0/mgcv/man/gam.selection.Rd | 136
mgcv-1.5-0/mgcv/man/gam.side.Rd | 8
mgcv-1.5-0/mgcv/man/gamObject.Rd | 20
mgcv-1.5-0/mgcv/man/gamSim.Rd | 3
mgcv-1.5-0/mgcv/man/ldTweedie.Rd |only
mgcv-1.5-0/mgcv/man/linear.functional.terms.Rd | 14
mgcv-1.5-0/mgcv/man/magic.Rd | 15
mgcv-1.5-0/mgcv/man/magic.post.proc.Rd | 10
mgcv-1.5-0/mgcv/man/mgcv-package.Rd | 8
mgcv-1.5-0/mgcv/man/mgcv.Rd | 2
mgcv-1.5-0/mgcv/man/negbin.Rd | 27
mgcv-1.5-0/mgcv/man/pcls.Rd | 62
mgcv-1.5-0/mgcv/man/plot.gam.Rd | 5
mgcv-1.5-0/mgcv/man/residuals.gam.Rd | 3
mgcv-1.5-0/mgcv/man/smooth.construct.Rd | 13
mgcv-1.5-0/mgcv/man/smooth.construct.ad.smooth.spec.Rd | 37
mgcv-1.5-0/mgcv/man/smooth.construct.cr.smooth.spec.Rd | 24
mgcv-1.5-0/mgcv/man/smooth.construct.ps.smooth.spec.Rd | 17
mgcv-1.5-0/mgcv/man/smooth.construct.tp.smooth.spec.Rd | 18
mgcv-1.5-0/mgcv/man/smoothCon.Rd | 6
mgcv-1.5-0/mgcv/man/sp.vcov.Rd |only
mgcv-1.5-0/mgcv/man/step.gam.Rd | 61
mgcv-1.5-0/mgcv/man/summary.gam.Rd | 40
mgcv-1.5-0/mgcv/man/te.Rd | 2
mgcv-1.5-0/mgcv/man/vcov.gam.Rd | 2
mgcv-1.5-0/mgcv/src/gdi.c | 3333 ++++++++++++-----
mgcv-1.5-0/mgcv/src/init.c | 9
mgcv-1.5-0/mgcv/src/magic.c | 277 -
mgcv-1.5-0/mgcv/src/mat.c | 140
mgcv-1.5-0/mgcv/src/mgcv.h | 36
mgcv-1.5-0/mgcv/src/misc.c |only
53 files changed, 5158 insertions(+), 2041 deletions(-)
Author: Guido Schwarzer
Diff between meta versions 0.9-17 dated 2009-01-29 and 0.9-18 dated 2009-03-03
Title: Meta-Analysis
Description: Fixed and random effects meta-analysis. Functions for tests of bias, forest and funnel plot.
DESCRIPTION | 6 +++---
R/print.meta.R | 1 -
2 files changed, 3 insertions(+), 4 deletions(-)
Author: Gregoire Pau
Diff between hwriter versions 1.0 dated 2009-02-08 and 1.1 dated 2009-03-03
Title: HTML Writer - Outputs R objects in HTML format
Description: Easy-to-use and versatile functions to output R objects in HTML format
DESCRIPTION | 4 ++--
DONE | 3 +++
R/example.R | 22 +++++++++-------------
build.sh | 7 +++----
inst/doc/hwriter.pdf |binary
man/hwriter-package.Rd | 5 +++--
6 files changed, 20 insertions(+), 21 deletions(-)
Author: Michael Lawrence, John Verzani
Title: Toolkit implementation of gWidgets for RGtk2
Description: Port of gWidgets API to RGtk2
Diff between gWidgetsRGtk2 versions 0.0-50 dated 2009-02-13 and 0.0-51 dated 2009-03-03
ChangeLog | 5 +++++ DESCRIPTION | 4 ++-- NEWS | 5 +++++ R/gvarbrowser.R | 11 ++++++----- 4 files changed, 18 insertions(+), 7 deletions(-)
Author: Jarrod Hadfield
Title: MCMC Generalised Linear Mixed Models
Description: MCMC Generalised Linear Mixed Models
Diff between MCMCglmm versions 1.03 dated 2009-02-24 and 1.04 dated 2009-03-03
DESCRIPTION | 6 - R/MCMCglmm.R | 217 +++++++++++++++++++++++++++++++++++--------------- R/rbv.R | 8 - inst/doc/Tutorial.pdf |binary src/MCMCglmm.cc | 122 ++++++++++++++++++---------- src/rbv.cc | 4 6 files changed, 243 insertions(+), 114 deletions(-)
Author: Andrew O. Finley
Diff between spBayes versions 0.1-0 dated 2008-06-09 and 0.1-1 dated 2009-03-03
Title: Univariate and Multivariate Spatial Modeling
Description: spBayes fits univariate and multivariate models with Markov chain Monte Carlo (MCMC).
spBayes-0.1-0/spBayes/R/BayesianRegression.R |only
spBayes-0.1-0/spBayes/R/BayesianUtilities.R |only
spBayes-0.1-0/spBayes/R/ggtsp.R |only
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spBayes-0.1-0/spBayes/src/splmPredict.cpp |only
spBayes-0.1-1/spBayes/DESCRIPTION | 10
spBayes-0.1-1/spBayes/NAMESPACE | 27 -
spBayes-0.1-1/spBayes/R/adaptMetropGibbs.R |only
spBayes-0.1-1/spBayes/R/bayesRegression.R |only
spBayes-0.1-1/spBayes/R/bayesUtilities.R |only
spBayes-0.1-1/spBayes/R/covGivens.R |only
spBayes-0.1-1/spBayes/R/covInvLogDet.R |only
spBayes-0.1-1/spBayes/R/dic.R | 457 +++++++++++++++++++-
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spBayes-0.1-1/spBayes/R/pointsInPoly.R |only
spBayes-0.1-1/spBayes/R/priors.R | 2
spBayes-0.1-1/spBayes/R/spGGT.R |only
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spBayes-0.1-1/spBayes/src/mPPCovInvDet_wrap.cpp |only
spBayes-0.1-1/spBayes/src/mvCov.cpp |only
spBayes-0.1-1/spBayes/src/mvCovInvDet.cpp |only
spBayes-0.1-1/spBayes/src/mvCovInvDet_wrap.cpp |only
spBayes-0.1-1/spBayes/src/mvMPPCov.cpp |only
spBayes-0.1-1/spBayes/src/mvMPPCovInvDet.cpp |only
spBayes-0.1-1/spBayes/src/mvMPPCovInvDet_wrap.cpp |only
spBayes-0.1-1/spBayes/src/mvPPCov.cpp |only
spBayes-0.1-1/spBayes/src/mvPPCovInvDet.cpp |only
spBayes-0.1-1/spBayes/src/mvPPCovInvDet_wrap.cpp |only
spBayes-0.1-1/spBayes/src/pPCov.cpp |only
spBayes-0.1-1/spBayes/src/pPCovInvDet.cpp |only
spBayes-0.1-1/spBayes/src/pPCovInvDet_wrap.cpp |only
spBayes-0.1-1/spBayes/src/ptsInPoly.cpp |only
spBayes-0.1-1/spBayes/src/spGLM.cpp |only
spBayes-0.1-1/spBayes/src/spGLMPredict.cpp |only
spBayes-0.1-1/spBayes/src/spLM.cpp |only
spBayes-0.1-1/spBayes/src/spLMPredict.cpp |only
spBayes-0.1-1/spBayes/src/spMPPMvDIC.cpp |only
spBayes-0.1-1/spBayes/src/spMvDIC.cpp |only
spBayes-0.1-1/spBayes/src/spMvGLM.cpp |only
spBayes-0.1-1/spBayes/src/spMvGLMPredict.cpp |only
spBayes-0.1-1/spBayes/src/spMvLM.cpp |only
spBayes-0.1-1/spBayes/src/spMvLMPredict.cpp |only
spBayes-0.1-1/spBayes/src/spPPGLM.cpp |only
spBayes-0.1-1/spBayes/src/spPPLM.cpp |only
spBayes-0.1-1/spBayes/src/spPPMvGLM.cpp |only
spBayes-0.1-1/spBayes/src/spPPMvLM.cpp |only
spBayes-0.1-1/spBayes/src/splmDIC.cpp | 182 ++++---
spBayes-0.1-1/spBayes/src/util.cpp | 233 ++++++++++
spBayes-0.1-1/spBayes/src/util.h | 31 +
110 files changed, 855 insertions(+), 148 deletions(-)
Author: Dan Kelley
Diff between oce versions 0.1-75 dated 2009-01-07 and 0.1-76 dated 2009-03-03
Title: Analysis of Oceanographic data
Description: Supports the analysis of Oceanographic data,
including CTD measurements, sea-level timeseries, coastline
files, etc. Also includes functions for calculating
seawater properties such as density, and derived properties
such as buoyancy frequency.
oce-0.1-75/oce/svn-commit.2.tmp |only
oce-0.1-75/oce/svn-commit.3.tmp |only
oce-0.1-75/oce/svn-commit.4.tmp |only
oce-0.1-76/oce/DESCRIPTION | 6
oce-0.1-76/oce/NAMESPACE | 23
oce-0.1-76/oce/NEWS | 15
oce-0.1-76/oce/R/ctd.trim.R | 37
oce-0.1-76/oce/R/decimate.R |only
oce-0.1-76/oce/R/fill.gap.R |only
oce-0.1-76/oce/R/make.filter.R |only
oce-0.1-76/oce/R/oce.edit.R | 19
oce-0.1-76/oce/R/oce.write.table.R |only
oce-0.1-76/oce/R/plot.TS.R | 8
oce-0.1-76/oce/R/plot.coastline.R | 25
oce-0.1-76/oce/R/plot.ctd.R | 123
oce-0.1-76/oce/R/plot.ctd.scan.R | 9
oce-0.1-76/oce/R/plot.profile.R | 72
oce-0.1-76/oce/R/plot.section.R | 12
oce-0.1-76/oce/R/plot.tdr.R | 8
oce-0.1-76/oce/R/plot.topo.R | 8
oce-0.1-76/oce/R/read.ctd.R | 123
oce-0.1-76/oce/R/read.sealevel.R | 14
oce-0.1-76/oce/R/read.tdr.R | 24
oce-0.1-76/oce/R/read.topo.R | 8
oce-0.1-76/oce/R/summary.ctd.R | 2
oce-0.1-76/oce/R/summary.lobo.R | 4
oce-0.1-76/oce/R/summary.tdr.R | 4
oce-0.1-76/oce/R/summary.tide.R | 14
oce-0.1-76/oce/R/summary.topo.R | 6
oce-0.1-76/oce/R/sw.N2.R | 9
oce-0.1-76/oce/R/tidem.R | 29
oce-0.1-76/oce/R/zzz.R | 8
oce-0.1-76/oce/data/coastline.sle.rda |only
oce-0.1-76/oce/data/section.rda |binary
oce-0.1-76/oce/inst/doc/Rplots.ps |only
oce-0.1-76/oce/inst/doc/oce-coastlinefig.eps |only
oce-0.1-76/oce/inst/doc/oce-coastlinefig.pdf |only
oce-0.1-76/oce/inst/doc/oce-sectionfig.eps |only
oce-0.1-76/oce/inst/doc/oce-sectionfig.pdf |only
oce-0.1-76/oce/inst/doc/oce-tidefig.eps |only
oce-0.1-76/oce/inst/doc/oce-tidefig.pdf |only
oce-0.1-76/oce/inst/doc/oce.R |only
oce-0.1-76/oce/inst/doc/oce.Rnw | 34
oce-0.1-76/oce/inst/doc/oce.pdf | 5376 +++++++++++++--------------
oce-0.1-76/oce/man/a03.Rd | 31
oce-0.1-76/oce/man/coastline.hal.Rd | 2
oce-0.1-76/oce/man/coastline.sle.Rd |only
oce-0.1-76/oce/man/ctd.Rd | 31
oce-0.1-76/oce/man/ctd.add.column.Rd | 5
oce-0.1-76/oce/man/ctd.raw.Rd | 2
oce-0.1-76/oce/man/ctd.trim.Rd | 27
oce-0.1-76/oce/man/decimate.Rd |only
oce-0.1-76/oce/man/fill.gap.Rd |only
oce-0.1-76/oce/man/make.filter.Rd |only
oce-0.1-76/oce/man/oce.edit.Rd | 36
oce-0.1-76/oce/man/oce.write.table.Rd |only
oce-0.1-76/oce/man/parse.latlon.Rd |only
oce-0.1-76/oce/man/plot.TS.Rd | 6
oce-0.1-76/oce/man/plot.coastline.Rd | 28
oce-0.1-76/oce/man/plot.ctd.Rd | 86
oce-0.1-76/oce/man/plot.ctd.scan.Rd | 5
oce-0.1-76/oce/man/plot.profile.Rd | 19
oce-0.1-76/oce/man/plot.tdr.Rd | 13
oce-0.1-76/oce/man/plot.topo.Rd | 2
oce-0.1-76/oce/man/read.ctd.Rd | 4
oce-0.1-76/oce/man/read.sealevel.Rd | 7
oce-0.1-76/oce/man/read.tdr.Rd | 26
oce-0.1-76/oce/man/read.topo.Rd | 6
oce-0.1-76/oce/man/section.Rd | 6
oce-0.1-76/oce/man/summary.tdr.Rd | 4
oce-0.1-76/oce/man/summary.tide.Rd | 6
oce-0.1-76/oce/man/summary.topo.Rd | 2
oce-0.1-76/oce/man/sw.N2.Rd | 22
oce-0.1-76/oce/man/tdr.Rd | 8
oce-0.1-76/oce/man/tdr.patm.Rd | 4
oce-0.1-76/oce/man/tdr.trim.Rd | 9
oce-0.1-76/oce/man/tidem.Rd | 44
oce-0.1-76/oce/src/sw_spice.c | 2
oce-0.1-76/oce/src/sw_svel.c | 1
oce-0.1-76/oce/tests/ctd.cnv |only
80 files changed, 3395 insertions(+), 3069 deletions(-)
Author: John Verzani
Title: Toolkit implementation of gWidgets for www
Description: Port of gWidgets API to www using Rpad to link R with a web page and Ext to create widgets.
Processing code from http://ejohn.org/blog/processingjs
Diff between gWidgetsWWW versions 0.0-5 dated 2009-02-10 and 0.0-6 dated 2009-03-03
DESCRIPTION | 5 - NAMESPACE | 6 - NEWS | 16 +++ R/aaa.R | 155 +++++++++++++++++++++++----------- R/common.R | 2 R/dialogs.R | 36 ++++---- R/gcheckboxgroup.R | 4 R/gcombobox.R | 29 +++--- R/gedit.R | 4 R/ggroup.R | 33 +++++-- R/ghtml.R | 3 R/glayout.R | 2 R/gnotebook.R | 1 R/gprocessingjs.R |only R/gradio.R | 2 R/gstatusbar.R | 4 R/gtable.R | 2 R/gtext.R | 14 ++- R/gwindow.R | 12 +- R/icons.R | 2 TODO.txt | 11 +- inst/Examples/ex-actions.R | 2 inst/Examples/ex-actions.html | 56 ++++++++---- inst/Examples/ex-buttons.R | 2 inst/Examples/ex-buttons.html | 44 +++++++-- inst/Examples/ex-editdata.R |only inst/Examples/ex-editdata.html |only inst/Examples/ex-form.R | 4 inst/Examples/ex-form.html | 48 +++++++--- inst/Examples/ex-gcombobox.R | 14 +-- inst/Examples/ex-gcombobox.html | 44 +++++++-- inst/Examples/ex-ggooglemaps.html | 84 +++++++----------- inst/Examples/ex-ghtml.R | 2 inst/Examples/ex-ghtml.html | 49 +++++++--- inst/Examples/ex-gprocessingjs.R |only inst/Examples/ex-gprocessingjs.html |only inst/Examples/ex-gui-plots.R | 10 +- inst/Examples/ex-gui.R | 23 ++--- inst/Examples/ex-gui.html | 42 +++++++-- inst/Examples/ex-index.R | 34 +++++-- inst/Examples/ex-index.html | 41 +++++++-- inst/Examples/ex-layouts.R | 36 ++++---- inst/Examples/ex-layouts.html | 42 +++++++-- inst/Examples/ex-t-test.R | 20 ++-- inst/Examples/ex-t-test.html | 55 ++++++++---- inst/Examples/ex-widgets.R | 3 inst/Examples/ex-widgets.html | 161 ++++++++---------------------------- inst/Examples/ex-windows.R | 2 inst/Examples/ex-windows.html | 42 +++++++-- inst/doc |only inst/javascript |only man/gWidgetsWWW-undocumented.Rd | 1 man/ggooglemaps.Rd | 6 - man/gprocessingjs.Rd |only 54 files changed, 722 insertions(+), 488 deletions(-)
Author: Rob Goedman
Diff between Ryacas versions 0.2-7 dated 2007-09-09 and 0.2-9 dated 2009-03-03
Title: R interface to the yacas computer algebra system
Description: An interface to the yacas computer algebra system.
Ryacas-0.2-7/Ryacas/inst/doc/Ryacas.toc |only
Ryacas-0.2-9/Ryacas/DESCRIPTION | 14
Ryacas-0.2-9/Ryacas/inst/NEWS | 10
Ryacas-0.2-9/Ryacas/inst/THANKS | 1
Ryacas-0.2-9/Ryacas/inst/doc/Ryacas-raw | 10
Ryacas-0.2-9/Ryacas/inst/doc/Ryacas.pdf | 611 ++++++++++++++----------------
Ryacas-0.2-9/Ryacas/man/Ryacas-package.Rd | 6
Ryacas-0.2-9/Ryacas/man/yacas.Rd | 6
Ryacas-0.2-9/Ryacas/man/yacasInstall.Rd | 2
9 files changed, 337 insertions(+), 323 deletions(-)
Author: Matthew K. Lau
Title: Dunnett-Tukey-Kramer Pairwise Multiple Comparison Test Adjusted for Unequal Variances and Unequal Sample Sizes
Description: Functions for conducting and plotting Dunnett's modified Tukey-Kramer pairwise multiple comparison test accounting for unequal variance and unequal sample sizes.
Diff between DTK versions 1.0 dated 2009-02-27 and 1.1 dated 2009-03-03
DESCRIPTION | 8 ++++---- man/DTK-package.Rd | 4 ++-- 2 files changed, 6 insertions(+), 6 deletions(-)