Author: Arne Henningsen
Title: Microeconomic Analysis and Modelling
Description: Tools for microeconomic analysis and microeconomic modelling
Diff between micEcon versions 0.5-12 dated 2009-02-26 and 0.5-14 dated 2009-03-09
DESCRIPTION | 6 +++--- R/compPlot.R | 2 +- R/quadFuncCalc.R | 12 +++--------- R/quadFuncCheckCoefNames.R |only R/quadFuncDeriv.R | 10 ++++------ R/quadFuncEla.R | 10 +++------- tests/quadFunc.R | 10 +++++----- tests/quadFunc.Rout.save | 20 ++++++++++---------- tests/translog.R | 10 +++++----- tests/translog.Rout.save | 18 +++++++++--------- 10 files changed, 43 insertions(+), 55 deletions(-)
Author: Vinzenz Erhardt
Title: Zero Inflated Generalized Poisson (ZIGP) regression models
Description: Fit and analyze and compare GP, ZIP and ZIGP regression models
Diff between ZIGP versions 3.2 dated 2009-01-05 and 3.3 dated 2009-03-09
DESCRIPTION | 6 +- R/clarke.r | 103 +++++++++++++++++++++++++++++++++++++++----------- R/vuong.r | 88 +++++++++++++++++++++++++++++++++++------- inst |only man/ZIGP-package.rd | 10 ++-- man/clarke.rd | 74 ++++++++++++++++++----------------- man/vuong.rd | 107 ++++++++++++++++++++++++++-------------------------- 7 files changed, 257 insertions(+), 131 deletions(-)
Author: Hector Corrada Bravo (CSDP by Brian Borchers)
Title: R interface to the CSDP semidefinite programming library
Description: R interface to the CSDP semidefinite programming library. Installs version 6.0.1 of CSDP from the COIN-OR website if required. An existing intallation of CSDP may be used by passing the proper configure arguments to the installation command. See the INSTALL file for further details.
Diff between Rcsdp versions 0.1-2 dated 2009-03-08 and 0.1-3 dated 2009-03-09
DESCRIPTION | 6 +++--- src/Makevars.in | 6 +----- src/Makevars.win | 2 +- 3 files changed, 5 insertions(+), 9 deletions(-)
Author: David Meyer, Achim Zeileis, Kurt Hornik
Title: Visualizing Categorical Data
Description: Visualization techniques, data sets, summary and inference
procedures aimed particularly at categorical data. Special
emphasis is given to highly extensible grid graphics. The
package was inspired by the book "Visualizing Categorical Data"
by Michael Friendly.
Diff between vcd versions 1.2-2 dated 2009-02-05 and 1.2-3 dated 2009-03-09
vcd-1.2-2/vcd/inst/doc/hcl-colors.pdf |only vcd-1.2-3/vcd/DESCRIPTION | 6 +++--- vcd-1.2-3/vcd/NEWS | 4 ++++ vcd-1.2-3/vcd/inst/NEWS | 4 ++++ vcd-1.2-3/vcd/inst/doc/residual-shadings.pdf | 26 +++++++++++++------------- vcd-1.2-3/vcd/inst/doc/strucplot.pdf |binary 6 files changed, 24 insertions(+), 16 deletions(-)
Author: Hsin-ya Lee
Diff between bear versions 2.2.0 dated 2009-02-12 and 2.3.0 dated 2009-03-09
Title: Average bioequivalence and bioavailability data analysis tool
Description: An average bioequivalence (ABE) and bioavailability data analysis tool including sample size estimation,
noncompartmental analysis (NCA), ANOVA (lm) for a standard RT/TR 2x2x2 crossover design and linear mixed
effect model (lme of nlme) for a 2-treatment, 2-sequence, with 2 periods or more (i.e. 2x2x3/2x2x4)
replicate design or 2-treatment, 2-sequence, 1-period parallel ABE study (2x2x1).
DESCRIPTION | 10
R/ARS.r | 247 +++++-------
R/BANOVA.r | 744 +++++++++++++++----------------------
R/BANOVAanalyze.r | 30 +
R/BANOVAcsv.r | 118 +++++
R/BANOVAdata.r | 82 +++-
R/BANOVAoutput.r | 62 ++-
R/BANOVAplot.r | 104 +++--
R/Multiplemenu.r | 9
R/Multiplestatmenu.r | 11
R/NCA.BANOVAanalyze.r | 6
R/NCA.BANOVAcsv.r | 219 +++++++---
R/NCA.BANOVAdata.r | 52 +-
R/NCA.r | 208 ++++------
R/NCAanalyze.r | 111 ++++-
R/NCAcsv.r | 160 ++++++-
R/NCAdata.r | 37 +
R/NCAmenu.r | 40 +
R/NCAoutput.r | 87 +++-
R/NCAplot.r | 170 ++++++--
R/NCAsave.r | 17
R/NCAselect.r | 85 ++--
R/NCAselectsave.r | 24 +
R/ParaAIC.MIX.r |only
R/ParaAIC.r |only
R/ParaAICdemo.r |only
R/ParaAICoutput.r |only
R/ParaARS.MIX.r |only
R/ParaARS.r |only
R/ParaARSdemo.r |only
R/ParaARSoutput.r |only
R/ParaMIX.r |only
R/ParaMIXanalyze.r |only
R/ParaMIXcsv.r |only
R/ParaMIXdata.r |only
R/ParaMIXmenu.r |only
R/ParaMIXoutput.r |only
R/ParaNCA.MIX.r |only
R/ParaNCA.MIXanalyze.r |only
R/ParaNCA.MIXcsv.r |only
R/ParaNCA.MIXdata.r |only
R/ParaNCA.MIXmenu.r |only
R/ParaNCA.r |only
R/ParaNCAanalyze.r |only
R/ParaNCAcsv.r |only
R/ParaNCAdata.r |only
R/ParaNCAdemo.MIX.r |only
R/ParaNCAdemo.r |only
R/ParaNCAoutput.r |only
R/ParaNCAplot.r |only
R/ParaNCAsave.r |only
R/ParaNCAselect.MIX.r |only
R/ParaNCAselect.r |only
R/ParaNCAselectdemo.MIX.r |only
R/ParaNCAselectdemo.r |only
R/ParaNCAselectsave.MIX.r |only
R/ParaNCAselectsave.r |only
R/ParaTTT.MIX.r |only
R/ParaTTT.r |only
R/ParaTTTAIC.MIX.r |only
R/ParaTTTAIC.r |only
R/ParaTTTAICdemo.r |only
R/ParaTTTAICoutput.r |only
R/ParaTTTARS.MIX.r |only
R/ParaTTTARS.r |only
R/ParaTTTARSdemo.r |only
R/ParaTTTARSoutput.r |only
R/ParaTTTdemo.r |only
R/ParaTTToutput.r |only
R/ParademoMIX.r |only
R/Parademomenu.r |only
R/Parademomenu1.r |only
R/Paramenu.r |only
R/RepAICoutput.r | 4
R/RepARS.r | 3
R/RepARSoutput.r | 4
R/RepMIX.r | 291 ++++++++++++--
R/RepMIXanalyze.r | 60 ++
R/RepMIXcsv.r | 2
R/RepMIXdata.r | 2
R/RepMIXmenu.r | 14
R/RepMIXoutput.r | 102 ++++-
R/RepNCA.MIX.r | 3
R/RepNCA.MIXanalyze.r | 1
R/RepNCA.MIXcsv.r | 3
R/RepNCA.MIXdata.r | 4
R/RepNCA.MIXmenu.r | 21 -
R/RepNCAanalyze.r | 13
R/RepNCAdata.r | 2
R/RepNCAoutput.r | 3
R/RepNCAplot.r | 2
R/RepNCAsave.r | 2
R/RepNCAselect.MIX.r | 3
R/RepNCAselect.r | 2
R/RepNCAselectdemo.MIX.r | 1
R/RepNCAselectsave.r | 2
R/RepTTT.r | 2
R/RepTTTAIC.r | 2
R/RepTTTAICoutput.r | 2
R/RepTTTARS.r | 3
R/RepTTTARSoutput.r | 2
R/RepTTToutput.r | 2
R/Repaic.r | 2
R/RepdemoMIX.r | 3
R/Repdemomenu1.r | 3
R/Repmenu.r | 31 -
R/TTT.r | 240 +++++------
R/TTTAIC.r | 231 +++++------
R/TTTARS.r | 235 +++++------
R/aic.r | 254 +++++-------
R/demoBANOVA.r | 59 ++
R/demomenu.r | 130 +++++-
R/demomenu1.r | 149 ++++++-
R/description_NCAcsv.r | 43 +-
R/description_NCAinput.r | 15
R/description_ParaMIX.r |only
R/description_ParaNCAcsv.r |only
R/description_ParaNCAinput.r |only
R/description_RepMIX.r | 2
R/description_RepNCAcsv.r | 2
R/description_RepNCAinput.r | 2
R/description_TOST1_lnAUC0INF.r |only
R/description_TOST1_lnAUC0t.r |only
R/description_TOST1_lnCmax.r |only
R/description_TOST_lnAUC0INF.r |only
R/description_TOST_lnAUC0t.r |only
R/description_TOST_lnCmax.r |only
R/description_plot.r | 7
R/description_size.r | 13
R/description_version.r | 4
R/logdata.r | 116 +++--
R/plotsingle.Rep.r |only
R/plotsingle.para.r |only
R/plotsingle.r |only
R/prdcount.r | 79 +++
R/sizemenu.r | 10
R/statmenu.r | 9
R/zzz.R | 8
data/Paralleldata.r |only
data/TotalSingledata.r | 2
man/BANOVA.rd | 19
man/ParaAIC.MIX.rd |only
man/ParaAIC.rd |only
man/ParaAICdemo.rd |only
man/ParaAICoutput.rd |only
man/ParaARS.MIX.rd |only
man/ParaARS.rd |only
man/ParaARSdemo.rd |only
man/ParaARSoutput.rd |only
man/ParaMIX.rd |only
man/ParaMIXanalyze.rd |only
man/ParaMIXcsv.rd |only
man/ParaMIXdata.rd |only
man/ParaMIXmenu.rd |only
man/ParaMIXoutput.rd |only
man/ParaNCA.MIX.rd |only
man/ParaNCA.MIXanalyze.rd |only
man/ParaNCA.MIXcsv.rd |only
man/ParaNCA.MIXdata.rd |only
man/ParaNCA.MIXmenu.rd |only
man/ParaNCA.rd |only
man/ParaNCAanalyze.rd |only
man/ParaNCAcsv.rd |only
man/ParaNCAdata.rd |only
man/ParaNCAdemo.MIX.rd |only
man/ParaNCAdemo.rd |only
man/ParaNCAoutput.rd |only
man/ParaNCAplot.rd |only
man/ParaNCAsave.rd |only
man/ParaNCAselect.MIX.rd |only
man/ParaNCAselect.rd |only
man/ParaNCAselectdemo.MIX.rd |only
man/ParaNCAselectdemo.rd |only
man/ParaNCAselectsave.MIX.rd |only
man/ParaNCAselectsave.rd |only
man/ParaTTT.MIX.rd |only
man/ParaTTT.rd |only
man/ParaTTTAIC.MIX.rd |only
man/ParaTTTAIC.rd |only
man/ParaTTTAICdemo.rd |only
man/ParaTTTAICoutput.rd |only
man/ParaTTTARS.MIX.rd |only
man/ParaTTTARS.rd |only
man/ParaTTTARSdemo.rd |only
man/ParaTTTARSoutput.rd |only
man/ParaTTTdemo.rd |only
man/ParaTTToutput.rd |only
man/ParademoMIX.rd |only
man/Parademomenu.rd |only
man/Parademomenu1.rd |only
man/Paralleldata.rd |only
man/Paramenu.rd |only
man/RepAICdemo.rd | 2
man/RepARS.MIX.rd | 2
man/RepMIX.rd | 2
man/RepMIXanalyze.rd | 4
man/RepMIXdata.rd | 2
man/RepNCA.MIX.rd | 2
man/RepNCA.MIXdata.rd | 2
man/RepNCAselectdemo.MIX.rd | 2
man/RepNCAselectsave.rd | 2
man/demosize.rd | 2
man/description_ParaMIX.rd |only
man/description_ParaNCAcsv.rd |only
man/description_ParaNCAinput.rd |only
man/description_RepMIX.rd | 2
man/description_TOST1_lnAUC0INF.rd |only
man/description_TOST1_lnAUC0t.rd |only
man/description_TOST1_lnCmax.rd |only
man/description_TOST_lnAUC0INF.rd |only
man/description_TOST_lnAUC0t.rd |only
man/description_TOST_lnCmax.rd |only
man/description_size.rd | 2
man/logdata.rd | 2
man/plotsingle.para.rd |only
man/plotsingle.rd |only
man/plotsingle.rep.rd |only
217 files changed, 3150 insertions(+), 1736 deletions(-)
Author: Juan R González, Lluís Armengol, Elisabet Guinó, Xavier Solé, and Víctor Moreno
Title: SNPs-based whole genome association studies
Description: This package carries out most common analysis when performing whole genome association studies. These analyses include descriptive statistics and exploratory analysis of missing values, calculation of Hardy-Weinberg equilibrium, analysis of association based on generalized linear models (either for quantitative or binary traits), and analysis of multiple SNPs (haplotype and epistasis analysis). Permutation test and related tests (sum statistic and truncated product) are also implemented.
Diff between SNPassoc versions 1.5-7 dated 2009-03-04 and 1.5-8 dated 2009-03-09
DESCRIPTION | 6 +++--- NAMESPACE | 5 +++++ R/plot.permTest.R | 6 ++---- inst/docs/changelog.txt | 4 ++++ 4 files changed, 14 insertions(+), 7 deletions(-)
Author: S-PLUS original by Phil Everson; R port by Roger D. Peng
Diff between tlnise versions 0.2-7 dated 2008-03-26 and 1.0 dated 2009-03-09
Title: Two-level normal independent sampling estimation
Description: Functions for two level normal models as described in Everson and Morris (2000). J. R. Statist. Soc. B, 62 prt 2, pp.399--412.
DESCRIPTION | 10 +++++-----
inst/LICENSE |only
man/tlnise.Rd | 10 ++++++----
tests/reg-tests.Rout.save | 14 +++++++-------
4 files changed, 18 insertions(+), 16 deletions(-)
Author: Matthias Templ, Berhard Meindl
Title: Statistical Disclosure Control methods for the generation of public- and scientific-use files.
Description: Data from statistical agencies and other institutions are mostly confidential. This package can be used for the generation of save (micro)data, i.e. for the generation of public- and scientific-use files.
Diff between sdcMicro versions 2.5.7 dated 2009-02-10 and 2.5.8 dated 2009-03-09
DESCRIPTION | 10 +- R/addNoise.r | 2 R/microaggregation.R | 10 +- R/plot.indivRisk.r | 9 + R/summary.micro.R | 8 - R/valTable.R | 8 - R/zzz.R | 4 inst/doc/Rplots.pdf | 218 +++++++++++++++++++++++++++++++++------------ inst/doc/sdcMicroPaper.pdf |binary man/addNoise.Rd | 2 10 files changed, 187 insertions(+), 84 deletions(-)
Author: Graham Williams, Michael Hahsler (arules), Zementis Inc,
Hemant Ishwaran, Udaya B. Kogalur, Rajarshi Guha
Title: Generate PMML for various models
Description: The Predictive Modelling Markup Language (PMML) is a language
for representing models, in an application independent way. Such models
can then be loaded into other applications supporting PMML, including
ADAPA from Zementis, Teradata Warehouse Miner and IBM's DB2.
The package provides a generic pmml function to generate pmml for an
object. Using a S3 generic function the approriate method for the
class of the supplied object is dispatched.
The package currently supports the export of PMML for linear
regression, SVMs, rpart classification trees,
randomSurvivalForest forest models, and kmeans clusters.
This package is part of the Rattle toolkit.
Diff between pmml versions 1.2.9 dated 2009-03-06 and 1.2.10 dated 2009-03-09
DESCRIPTION | 6 ++--- R/pmml.R | 63 +++++++++++++++++++++++++++--------------------------- R/pmml.lm.R | 4 +-- man/pmml.Rd | 7 ++++++ man/pmml.lm.Rd | 7 ++++++ man/pmml.rpart.Rd | 4 +-- tests |only 7 files changed, 53 insertions(+), 38 deletions(-)
Author: Bernhard Pfaff
Title: Generalized Orthogonal GARCH (GO-GARCH) models
Description: Implementation of the GO-GARCH model class
Diff between gogarch versions 0.6-7 dated 2009-02-24 and 0.6-8 dated 2009-03-09
DESCRIPTION | 8 ++++---- R/Functions.R | 7 ++++--- inst/ChangeLog | 4 ++++ 3 files changed, 12 insertions(+), 7 deletions(-)
Author: Pierre Chausse
Diff between gmm versions 1.0-2 dated 2009-03-05 and 1.0-3 dated 2009-03-09
Title: Generalized Method of Moments and Generalized Empirical Likelihood
Description: It is a complete suite to estimate models based on moment conditions. It includes the two step Generalized method of moments (GMM) of Hansen(1982), the iterated GMM and continuous updated estimator (CUE) of Hansen-Eaton-Yaron(1996) and several methods that belong to the Generalized Empirical Likelihood (GEL) family of estimators, as presented by Smith(1997), Kitamura(1997), Newey-Smith(2004) and Anatolyev(2005).
DESCRIPTION | 6 +++---
R/gel.R | 4 ++--
2 files changed, 5 insertions(+), 5 deletions(-)