Fri, 20 Mar 2009

Package survival updated to version 2.35-3 with previous version 2.35-2 dated 2009-03-20

Author: Terry Therneau, original R port by Thomas Lumley
Title: Survival analysis, including penalised likelihood.
Description: survival analysis: descriptive statistics, two-sample tests, parametric accelerated failure models, Cox model. Delayed entry (truncation) allowed for all models; interval censoring for parametric models. Case-cohort designs.

Diff between survival versions 2.35-2 dated 2009-03-20 and 2.35-3 dated 2009-03-20

 DESCRIPTION     |    6 +++---
 NAMESPACE       |    1 +
 R/format.Surv.S |    8 +++++---
 3 files changed, 9 insertions(+), 6 deletions(-)

More information about survival at CRAN
Permanent link

Package survival updated to version 2.35-2 with previous version 2.34-1 dated 2008-04-02

Author: Terry Therneau, original R port by Thomas Lumley
Title: Survival analysis, including penalised likelihood.
Description: survival analysis: descriptive statistics, two-sample tests, parametric accelerated failure models, Cox model. Delayed entry (truncation) allowed for all models; interval censoring for parametric models. Case-cohort designs.

Diff between survival versions 2.34-1 dated 2008-04-02 and 2.35-2 dated 2009-03-20

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 survival-2.35-2/survival/man/clogit.Rd                |    2 
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 survival-2.35-2/survival/man/colon.Rd                 |    4 
 survival-2.35-2/survival/man/cox.zph.Rd               |   97 ++-
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 survival-2.35-2/survival/man/plot.survfit.Rd          |  264 +++++-----
 survival-2.35-2/survival/man/predict.coxph.Rd         |   65 +-
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 survival-2.35-2/survival/man/rats.Rd                  |    2 
 survival-2.35-2/survival/man/ridge.Rd                 |    1 
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 survival-2.35-2/survival/man/survexp.us.Rd            |    1 
 survival-2.35-2/survival/man/survfit.Rd               |  438 ++++++++++--------
 survival-2.35-2/survival/man/survfit.coxph.Rd         |only
 survival-2.35-2/survival/man/survfit.object.Rd        |  106 ++--
 survival-2.35-2/survival/man/survival-internal.Rd     |    7 
 survival-2.35-2/survival/man/survobrien.Rd            |   62 +-
 survival-2.35-2/survival/man/survreg.Rd               |  103 ++--
 survival-2.35-2/survival/man/survreg.control.Rd       |   16 
 survival-2.35-2/survival/man/survreg.distributions.Rd |  102 ++--
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 survival-2.35-2/survival/src/agexact.c                |   18 
 survival-2.35-2/survival/src/agfit3.c                 |   48 +
 survival-2.35-2/survival/src/agfit5.c                 |   99 ++--
 survival-2.35-2/survival/src/agmart.c                 |    6 
 survival-2.35-2/survival/src/agmart2.c                |    8 
 survival-2.35-2/survival/src/agscore.c                |   10 
 survival-2.35-2/survival/src/agsurv1.c                |   12 
 survival-2.35-2/survival/src/agsurv2.c                |   52 +-
 survival-2.35-2/survival/src/agsurv3.c                |   36 -
 survival-2.35-2/survival/src/chinv2.c                 |    3 
 survival-2.35-2/survival/src/chinv3.c                 |    2 
 survival-2.35-2/survival/src/cholesky2.c              |    3 
 survival-2.35-2/survival/src/cholesky3.c              |    2 
 survival-2.35-2/survival/src/chsolve2.c               |    3 
 survival-2.35-2/survival/src/chsolve3.c               |    2 
 survival-2.35-2/survival/src/cox_Rcallback.c          |    2 
 survival-2.35-2/survival/src/coxdetail.c              |   40 +
 survival-2.35-2/survival/src/coxfit2.c                |   26 -
 survival-2.35-2/survival/src/coxfit5.c                |   73 +--
 survival-2.35-2/survival/src/coxmart.c                |    9 
 survival-2.35-2/survival/src/coxph_wtest.c            |    4 
 survival-2.35-2/survival/src/coxscho.c                |    9 
 survival-2.35-2/survival/src/coxscore.c               |   11 
 survival-2.35-2/survival/src/dmatrix.c                |    4 
 survival-2.35-2/survival/src/doloop.c                 |    3 
 survival-2.35-2/survival/src/pyears1.c                |   50 +-
 survival-2.35-2/survival/src/pyears2.c                |   44 +
 survival-2.35-2/survival/src/pyears3.c                |   33 -
 survival-2.35-2/survival/src/pystep.c                 |   11 
 survival-2.35-2/survival/src/survConcordance.c        |only
 survival-2.35-2/survival/src/survS.h                  |   78 ++-
 survival-2.35-2/survival/src/survdiff2.c              |    8 
 survival-2.35-2/survival/src/survfit4.c               |only
 survival-2.35-2/survival/src/survpenal.c              |only
 survival-2.35-2/survival/src/survproto.h              |  359 ++++++--------
 survival-2.35-2/survival/src/survreg6.c               |only
 survival-2.35-2/survival/src/survreg7.c               |only
 survival-2.35-2/survival/src/survregc1.c              |only
 survival-2.35-2/survival/src/survregc2.c              |only
 survival-2.35-2/survival/tests                        |only
 352 files changed, 2688 insertions(+), 2112 deletions(-)

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Package vowels updated to version 1.0-1 with previous version 1.0 dated 2009-02-16

Author: Tyler Kendall and Erik R. Thomas
Title: Vowel Manipulation, Normalization, and Plotting
Description: vowels is an R package for the manipulation, normalization, and plotting of phonetic and sociophonetic vowel formant data. vowels is the backend for the NORM website.

Diff between vowels versions 1.0 dated 2009-02-16 and 1.0-1 dated 2009-03-20

 DESCRIPTION           |   12 ++++++++----
 R/vowels.R            |    2 +-
 man/vowels-package.Rd |    4 ++--
 3 files changed, 11 insertions(+), 7 deletions(-)

More information about vowels at CRAN
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Package stinepack updated to version 1.3 with previous version 1.2 dated 2008-08-21

Author: Tomas Johannesson & Halldor Bjornsson, Icelandic Met. Office; Gabor Grothendieck
Title: Stineman, a consistently well behaved method of interpolation
Description: A consistently well behaved method of interpolation based on piecewise rational functions using Stineman's algorithm

Diff between stinepack versions 1.2 dated 2008-08-21 and 1.3 dated 2009-03-20

 DESCRIPTION        |   12 ++++++++----
 R/parabolaSlopes.R |    4 +++-
 2 files changed, 11 insertions(+), 5 deletions(-)

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Package rscproxy updated to version 1.2-0 with previous version 1.0-12 dated 2008-10-30

Author: Thomas Baier
Title: statconn: provides portable C-style interface to R (StatConnector)
Description: rscproxy library provides an interface to R used by third party applications, most notable, but not limited to, statconnDCOM, ROOo and other systems.

Diff between rscproxy versions 1.0-12 dated 2008-10-30 and 1.2-0 dated 2009-03-20

 rscproxy-1.0-12/rscproxy/inst/include/bdx_com.h       |only
 rscproxy-1.0-12/rscproxy/src/bdx_com.c                |only
 rscproxy-1.2-0/rscproxy/DESCRIPTION                   |   25 +++---
 rscproxy-1.2-0/rscproxy/NAMESPACE                     |    2 
 rscproxy-1.2-0/rscproxy/R/convert.R                   |   26 +++++-
 rscproxy-1.2-0/rscproxy/R/rscproxy-internal.R         |    3 
 rscproxy-1.2-0/rscproxy/inst/include/SC_proxy.h       |   23 ++---
 rscproxy-1.2-0/rscproxy/inst/include/SC_system.h      |   23 ++---
 rscproxy-1.2-0/rscproxy/inst/include/bdx.h            |   39 +++++----
 rscproxy-1.2-0/rscproxy/inst/include/bdx_SEXP.h       |   26 ++----
 rscproxy-1.2-0/rscproxy/inst/include/bdx_util.h       |   26 ++----
 rscproxy-1.2-0/rscproxy/inst/include/com_util.h       |   25 ++----
 rscproxy-1.2-0/rscproxy/inst/include/rproxy.h         |   23 ++---
 rscproxy-1.2-0/rscproxy/man/as.data.frame.rcomdata.Rd |only
 rscproxy-1.2-0/rscproxy/src/Makevars                  |    6 -
 rscproxy-1.2-0/rscproxy/src/Makevars.win              |    6 -
 rscproxy-1.2-0/rscproxy/src/bdx_SEXP.c                |   74 +++++++++++-------
 rscproxy-1.2-0/rscproxy/src/bdx_util.c                |   28 +++---
 rscproxy-1.2-0/rscproxy/src/com_util.c                |   25 ++----
 rscproxy-1.2-0/rscproxy/src/rproxy.c                  |   36 +++-----
 rscproxy-1.2-0/rscproxy/src/rproxy_dev.c              |   23 ++---
 rscproxy-1.2-0/rscproxy/src/rproxy_impl.c             |   34 +++++---
 rscproxy-1.2-0/rscproxy/src/rproxy_impl.h             |   23 ++---
 23 files changed, 260 insertions(+), 236 deletions(-)

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New package rbenchmark with initial version 0.1
Package: rbenchmark
Type: Package
Title: Benchmarking routine for R
Version: 0.1
Date: 2009-03-19
Author: Wacek Kusnierczyk
Maintainer: Wacek Kusnierczyk
Description: rbenchmark is inspired by the Perl module Benchmark, and is intended to facilitate benchmarking of arbitrary R code. The library consists of just one function, benchmark, which is a simple wrapper around system.time. Given a specification of the benchmarking process (counts of replications, evaluation environment) and an arbitrary number of expressions, benchmark evaluates each of the expressions in the specified environment, replicating the evaluation as many times as specified, and returning the results conveniently wrapped into a data frame.
License: GPL (>= 2)
LazyLoad: yes
URL: http://rbenchmark.googlecode.com
Packaged: Thu Mar 19 14:43:44 2009; waku
Repository: CRAN
Date/Publication: 2009-03-20 07:48:45

More information about rbenchmark at CRAN
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