Author: Duncan Temple Lang
Diff between rggobi versions 2.1.10 dated 2008-08-14 and 2.1.13 dated 2009-05-05
Title: Interface between R and GGobi
Description: The rggobi package provides a command-line interface to
GGobi, an interactive and dynamic graphics package. Rggobi
complements GGobi's graphical user interface, providing a way
to fluidly transition between analysis and exploration, as well
as automating common tasks.
DESCRIPTION | 26 ++++++++++++++++----------
NAMESPACE | 1 +
R/call.r | 2 +-
R/data.r | 4 ++++
R/display.r | 4 +---
R/ggobi.r | 6 +++---
R/gtk.r | 1 -
aclocal.m4 | 4 ++--
demo/ball.R | 4 ++--
load.r | 2 +-
man/GGobiCall-n1.rd | 2 +-
man/check-versions-qe.rd |only
man/displays-GGobi-4v.rd | 2 +-
man/ggobi-version-ao.rd | 6 +++---
man/stormtracks.rd | 5 ++---
src/Makevars | 4 ++--
src/brush.c | 2 +-
src/dataset.c | 2 +-
src/ggobi.c | 5 -----
19 files changed, 42 insertions(+), 40 deletions(-)
Author: Ji-Hyung Shin
Diff between luca versions 1.0-4 dated 2009-04-19 and 1.0-5 dated 2009-05-05
Title: Likelihood inference from case-control data Under Covariate
Assumptions (LUCA)
Description: Likelihood inference in case-control studies of a rare
disease under independence or simple dependence of genetic and
non-genetic covariates
DESCRIPTION | 6 +++---
inst/CITATION | 6 +++---
inst/ChangeLog | 4 ++++
3 files changed, 10 insertions(+), 6 deletions(-)
Author: Thomas Lumley
Diff between leaps versions 2.8 dated 2009-02-25 and 2.9 dated 2009-05-05
Title: regression subset selection
Description: Regression subset selection including exhaustive search
DESCRIPTION | 12 +++++++-----
NAMESPACE | 3 +++
NEWS | 4 ++++
R/leaps.R | 44 ++++++++++++++++++++++++++++++++++++++++++++
man/leaps.Rd | 9 ++++++++-
man/regsubsets.Rd | 44 +++++++++++++++++++++++++++++++++++++++-----
6 files changed, 105 insertions(+), 11 deletions(-)
Author: Marco Scutari
Title: Bayesian network structure learning
Description: Bayesian network structure learning via constraint-based
(also known as 'conditional independence') and score-based
algorithms. This package implements the Grow-Shrink (GS)
algorithm, the Incremental Association (IAMB) algorithm, the
Interleaved-IAMB (Inter-IAMB) algorithm, the Fast-IAMB
(Fast-IAMB) algorithm, the Max-Min Parents and Children (MMPC)
algorithm and the Hill-Climbing (HC) greedy search algorithm
for both discrete and Gaussian networks, along with many score
functions and conditional independence tests. Some utility
functions (model comparison and manipulation, random data
generation, arc orientation testing, simple and advanced plots)
are also included.
Diff between bnlearn versions 1.3 dated 2009-03-29 and 1.4 dated 2009-05-05
bnlearn-1.3/bnlearn/data/learning.test.txt |only bnlearn-1.4/bnlearn/Changelog | 17 +++ bnlearn-1.4/bnlearn/DESCRIPTION | 10 - bnlearn-1.4/bnlearn/NAMESPACE | 1 bnlearn-1.4/bnlearn/R/arc.strength.R | 4 bnlearn-1.4/bnlearn/R/backend-indep.R | 30 ++--- bnlearn-1.4/bnlearn/R/choose.direction.R | 6 - bnlearn-1.4/bnlearn/R/ci.test.R | 22 ++-- bnlearn-1.4/bnlearn/R/fast-iamb.R | 24 ++-- bnlearn-1.4/bnlearn/R/formula.R | 7 + bnlearn-1.4/bnlearn/R/frontend-bn.R | 11 -- bnlearn-1.4/bnlearn/R/frontend-formula.R | 13 ++ bnlearn-1.4/bnlearn/R/frontend-learning.R | 37 +++---- bnlearn-1.4/bnlearn/R/frontend-print.R | 12 +- bnlearn-1.4/bnlearn/R/frontend-score.R | 29 ++--- bnlearn-1.4/bnlearn/R/frontend-simulation.R | 8 - bnlearn-1.4/bnlearn/R/globals.R | 11 +- bnlearn-1.4/bnlearn/R/graphviz.R | 8 + bnlearn-1.4/bnlearn/R/grow-shrink.R | 24 ++-- bnlearn-1.4/bnlearn/R/incremental-association.R | 24 ++-- bnlearn-1.4/bnlearn/R/inter-iamb.R | 31 ++---- bnlearn-1.4/bnlearn/R/learning-algorithms.R | 61 ++++++------ bnlearn-1.4/bnlearn/R/maxmin-pc.R | 35 +++--- bnlearn-1.4/bnlearn/R/scores.R | 6 - bnlearn-1.4/bnlearn/R/simulation.R | 83 ++++++++++++++-- bnlearn-1.4/bnlearn/R/test.R | 18 --- bnlearn-1.4/bnlearn/R/utils-graph.R | 48 ++++----- bnlearn-1.4/bnlearn/R/utils-sanitization.R | 68 +++++++++++-- bnlearn-1.4/bnlearn/data/alarm.rda |only bnlearn-1.4/bnlearn/data/learning.test.rda |only bnlearn-1.4/bnlearn/data/marks.rda |only bnlearn-1.4/bnlearn/inst |only bnlearn-1.4/bnlearn/man/00.bnlearn-package.Rd | 121 ++++++++++++------------ bnlearn-1.4/bnlearn/man/10.gs.Rd | 31 ++---- bnlearn-1.4/bnlearn/man/11.iamb.Rd | 25 ++-- bnlearn-1.4/bnlearn/man/12.fast.iamb.Rd | 24 ++-- bnlearn-1.4/bnlearn/man/13.inter.iamb.Rd | 24 ++-- bnlearn-1.4/bnlearn/man/14.mmpc.Rd | 26 ++--- bnlearn-1.4/bnlearn/man/15.hc.Rd | 16 +-- bnlearn-1.4/bnlearn/man/20.mb.Rd | 19 +-- bnlearn-1.4/bnlearn/man/22.modelstring.Rd | 6 - bnlearn-1.4/bnlearn/man/24.graphgen.Rd | 7 - bnlearn-1.4/bnlearn/man/30.score.Rd | 21 ++-- bnlearn-1.4/bnlearn/man/31.ci.test.Rd | 25 ++++ bnlearn-1.4/bnlearn/man/40.rbn.Rd | 13 -- bnlearn-1.4/bnlearn/man/A0.learning-test.Rd | 63 +----------- bnlearn-1.4/bnlearn/man/A1.gaussian-test.Rd | 25 +--- bnlearn-1.4/bnlearn/man/A2.asia.Rd | 68 ++----------- bnlearn-1.4/bnlearn/man/A3.lizards.Rd | 13 +- bnlearn-1.4/bnlearn/man/A4.alarm.Rd |only bnlearn-1.4/bnlearn/man/A5.marks.Rd |only bnlearn-1.4/bnlearn/src/bayesian.network.c | 24 ++++ bnlearn-1.4/bnlearn/src/monte.carlo.c | 2 53 files changed, 648 insertions(+), 553 deletions(-)
Author: Matthieu Lesnoff
Diff between aod versions 1.1-29 dated 2008-10-10 and 1.1-30 dated 2009-05-05
Title: Analysis of Overdispersed Data
Description: This package provides a set of functions to analyse
overdispersed counts or proportions. Most of the methods are
already available elsewhere but are scattered in different
packages. The proposed functions should be considered as
complements to more sophisticated methods such as generalized
estimating equations (GEE) or generalized linear mixed effect
models (GLMM).
DESCRIPTION | 37 +++++++++++++++++++++++--------------
inst/CITATION | 7 ++++---
man/aod-pkg.Rd | 6 +++---
man/logLik.Rd | 2 +-
4 files changed, 31 insertions(+), 21 deletions(-)
More information about ClinicalRobustPriors at CRAN
Permanent link
Author: Yves Croissant
Diff between plm versions 1.1-1 dated 2009-03-08 and 1.1-2 dated 2009-05-05
Title: Linear models for panel data
Description: A set of estimators and tests for panel data
plm-1.1-1/plm/R/plm.formula.R |only
plm-1.1-1/plm/R/plm.model.R |only
plm-1.1-1/plm/inst |only
plm-1.1-2/plm/DESCRIPTION | 15
plm-1.1-2/plm/R/divers.R | 64 ++-
plm-1.1-2/plm/R/dynformula.R |only
plm-1.1-2/plm/R/fixef.R | 9
plm-1.1-2/plm/R/pFormula.R | 10
plm-1.1-2/plm/R/pfunctions.R | 22 -
plm-1.1-2/plm/R/pgmm.R | 791 +++++++++--------------------------------
plm-1.1-2/plm/R/pgmm.methods.R |only
plm-1.1-2/plm/R/plm.R |only
plm-1.1-2/plm/R/plm.methods.R | 37 +
plm-1.1-2/plm/R/pserial.R | 1
plm-1.1-2/plm/R/pvcovHC.R | 6
plm-1.1-2/plm/changelog | 18
plm-1.1-2/plm/man/fixef.plm.Rd | 5
plm-1.1-2/plm/man/pgmm.Rd | 9
18 files changed, 335 insertions(+), 652 deletions(-)
Author: Robin K. S. Hankin
Title: Additive partitions of integers
Description: Additive partitions of integers. Enumerates the
partitions, unequal partitions, and restricted partitions of an
integer; the three corresponding partition functions are also
given. Set partitions are now included.
Diff between partitions versions 1.9-3 dated 2009-02-15 and 1.9-6 dated 2009-05-05
DESCRIPTION | 16 inst/doc/answers.Rdata |only inst/doc/partitionspaper.Rnw | 8 inst/doc/partitionspaper.pdf |binary inst/doc/scrabble.Rnw | 82 inst/doc/scrabble.pdf |binary inst/doc/setpartitions.Rnw | 7 inst/doc/setpartitions.pdf | 8057 +++++++++++++++++++++++++++++++------------ man/parts.Rd | 7 src/partitions.h | 18 10 files changed, 5943 insertions(+), 2252 deletions(-)
Author: Arne Henningsen
Title: Microeconomic Analysis and Modelling
Description: Tools for microeconomic analysis and microeconomic
modelling
Diff between micEcon versions 0.5-14 dated 2009-03-09 and 0.5-18 dated 2009-05-05
DESCRIPTION | 11 - INDEX | 1 R/cobbDouglasCalc.R | 26 ++ R/cobbDouglasDeriv.R |only R/quadFuncDeriv.R | 9 R/quadFuncEla.R | 2 R/translogCheckMono.R | 2 R/translogDeriv.R | 2 R/translogEla.R | 3 data/germanFarms.txt | 42 ++-- man/USMeatConsump.Rd | 2 man/aidsBestA0.Rd | 2 man/aidsCalc.Rd | 2 man/aidsConcav.Rd | 2 man/aidsConsist.Rd | 2 man/aidsElas.Rd | 2 man/aidsEst.Rd | 2 man/aidsMono.Rd | 2 man/aidsUtility.Rd | 2 man/cobbDouglasCalc.Rd | 19 +- man/cobbDouglasDeriv.Rd |only man/fitted.aidsEst.Rd | 2 man/germanFarms.Rd | 4 man/logLik.aidsEst.Rd | 2 man/lrtest.aidsEst.Rd | 2 man/predict.snqProfitEst.Rd | 2 man/print.snqProfitEst.Rd | 4 man/quadFuncDeriv.Rd | 17 + man/quadFuncEla.Rd | 2 man/residuals.snqProfitEst.Rd | 2 man/snqProfitCalc.Rd | 2 man/snqProfitEla.Rd | 2 man/snqProfitEst.Rd | 2 man/snqProfitFixEla.Rd | 2 man/snqProfitHessian.Rd | 2 man/snqProfitHessianDeriv.Rd | 2 man/snqProfitImposeConvexity.Rd | 2 man/snqProfitShadowPrices.Rd | 2 man/summary.aidsElas.Rd | 2 man/summary.aidsEst.Rd | 2 man/translogCheckMono.Rd | 2 man/translogDeriv.Rd | 2 man/translogEla.Rd | 16 - tests/aids.R | 52 ++--- tests/aids.Rout.save | 77 +++----- tests/cobbDouglasTest.R | 51 ++++- tests/cobbDouglasTest.Rout.save | 216 +++++++++++++++++++++-- tests/colMediansTest.Rout.save | 32 +-- tests/indices.Rout.save | 12 - tests/insertColRow.Rout.save | 12 - tests/npregHomTest.Rout.save | 12 - tests/quadFunc.R | 68 ++++--- tests/quadFunc.Rout.save | 120 ++++--------- tests/snqProfit.R | 8 tests/snqProfit.Rout.save | 369 +++++++++++++++++++--------------------- tests/translog.R | 10 - tests/translog.Rout.save | 54 +---- tests/translogCost.Rout.save | 12 - 58 files changed, 772 insertions(+), 545 deletions(-)
Author: Michal Czajkowski, Ryan Gill, Greg Rempala
Title: Logistic Joinpoint Regression
Description: Fits and tests logistic joinpoint models.
Diff between ljr versions 1.2-0 dated 2008-05-08 and 1.2-2 dated 2009-05-05
DESCRIPTION | 10 ++++++---- R/firstlib.R | 2 +- man/ljr0.rd | 2 +- man/ljr01.rd | 2 +- man/ljr1.rd | 2 +- man/ljr11.rd | 2 +- man/ljrb.rd | 2 +- man/ljrf.rd | 2 +- man/ljrjk.rd | 2 +- man/ljrk.rd | 2 +- man/ljrkk.rd | 2 +- src/Makevars | 2 +- 12 files changed, 17 insertions(+), 15 deletions(-)
Author: Nathan Stephens
Diff between hacks versions 0.1-5 dated 2009-01-23 and 0.1-8 dated 2009-05-05
Title: Convenient R Functions
Description: This package contains useful functions.
DESCRIPTION | 14 ++++++++------
R/difference.sign.test.r |only
R/rank.test.r |only
R/scale2.r |only
R/turning.point.test.r |only
R/wiki.table.r |only
man/difference.sign.test.rd |only
man/rank.test.rd |only
man/scale2.rd |only
man/turning.point.test.rd |only
man/wa.rd | 3 +--
man/wiki.table.rd |only
12 files changed, 9 insertions(+), 8 deletions(-)
Author: Robin K. S. Hankin; qrng functions by Duncan Murdoch and
multimin by Andrew Clausen
Title: wrapper for the Gnu Scientific Library
Description: An R wrapper for the special functions and quasi random
number generators of the Gnu Scientific Library
(http://www.gnu.org/software/gsl/). See gsl-package.Rd for
details of overall package organization, and Misc.Rd for some
functions that are widely used in the package.
Diff between gsl versions 1.8-13 dated 2009-03-30 and 1.8-14 dated 2009-05-05
DESCRIPTION | 6 +++--- inst/doc |only man/Airy.Rd | 10 +++++----- man/Bessel.Rd | 2 +- man/Coupling.Rd | 2 +- man/Dilog.Rd | 4 ++-- man/Elljac.Rd | 2 +- man/Expint.Rd | 2 +- man/Gamma.Rd | 4 ++-- man/Lambert.Rd | 4 ++-- man/Legendre.Rd | 2 +- man/Log.Rd | 8 ++++---- man/Misc.Rd | 4 ++-- man/Multimin.Rd | 6 +++--- man/Poly.Rd | 4 ++-- man/Qrng.Rd | 4 ++-- man/Rng.Rd | 6 +++--- man/Trig.Rd | 6 +++--- man/gsl-package.Rd | 18 +++++++++--------- 19 files changed, 47 insertions(+), 47 deletions(-)
Author: Tim Coelli, Arne Henningsen
Title: Stochastic Frontier Analysis
Description: Maximum Likelihood Estimation of Stochastic Frontier
Production and Cost Functions. Two specifications are
available: the error components specification with time-varying
efficiencies (Battese and Coelli, 1992) and a model
specification in which the firm effects are directly influenced
by a number of variables (Battese and Coelli, 1995).
Diff between frontier versions 0.9-8 dated 2009-01-14 and 0.99-2 dated 2009-05-05
DESCRIPTION | 27 INDEX |only NAMESPACE | 7 NEWS |only R/efficiencies.R |only R/efficiencies.frontier.R |only R/elas.frontierQuad.R |only R/frontier.R | 254 R/frontierQuad.R |only R/frontierTranslogRay.R |only R/logLik.frontier.R |only R/print.frontier.R | 14 R/print.summary.frontier.R | 14 man/coef.frontier.Rd | 4 man/coef.summary.frontier.Rd | 4 man/efficiencies.Rd |only man/efficiencies.frontier.Rd |only man/elas.frontierQuad.Rd |only man/frontier.Rd | 185 man/frontierQuad.Rd |only man/frontierTranslogRay.Rd |only man/logLik.frontier.Rd |only man/riceProdPhil.Rd | 2 man/summary.frontier.Rd | 17 man/vcov.frontier.Rd | 4 tests/frontier41.Rout.save | 70 tests/frontierTest.R | 171 tests/frontierTest.Rout.save |11017 +++++++++++++++++++++++++++---------------- tests/translogRay.R |only tests/translogRay.Rout.save |only 30 files changed, 7612 insertions(+), 4178 deletions(-)
Author: R-core members, Saikat DebRoy
Diff between foreign versions 0.8-34 dated 2009-03-12 and 0.8-35 dated 2009-05-05
Title: Read Data Stored by Minitab, S, SAS, SPSS, Stata, Systat, dBase,
...
Description: Functions for reading and writing data stored by
statistical packages such as Minitab, S, SAS, SPSS, Stata,
Systat, ..., and for reading and writing .dbf (dBase) files.
ChangeLog | 9 +++++++++
DESCRIPTION | 8 ++++----
src/Rdbfread.c | 18 ++++++++++--------
src/dbfopen.c | 14 ++++++++++++--
4 files changed, 35 insertions(+), 14 deletions(-)
Author: Thomas Lumley
Title: bounded memory linear and generalized linear models
Description: Regression for data too large to fit in memory
Diff between biglm versions 0.6 dated 2009-02-24 and 0.7 dated 2009-05-05
DESCRIPTION | 8 ++++-- NAMESPACE | 4 ++- NEWS | 11 +++++++++ R/bigglm.R | 21 ++++++++++++++--- R/biglm.R | 7 ++++- R/coef.bigqr.R | 1 R/extractors.R | 2 - R/predict.R | 2 - R/sqlite.R | 69 +++++++++++++++++++++++++++++---------------------------- R/vcov.biglm.R | 2 - man/bigglm.Rd | 8 ++++-- 11 files changed, 86 insertions(+), 49 deletions(-)
Author: Francois Husson, Sebastien Le
Title: Sensory data analysis with R
Description: an R package for analysing sensory data
Diff between SensoMineR versions 1.08 dated 2008-09-16 and 1.09 dated 2009-05-05
DESCRIPTION | 27 NAMESPACE | 2 R/averagetable.R | 3 R/coltable.R | 8 R/coltable2.R |only R/cpa.R | 49 - R/fast.R |only R/indscal.R | 2 R/optimaldesign.R | 1575 ++++++++++++++++++----------------------------- R/panellipse.R | 4 R/plot.fast.R |only R/plotellipseinter.R | 4 R/plotellipseinterhmfa.R | 4 R/print.fast.R |only data/perfume.rda |only man/chocolates.Rd | 12 man/cocktail.Rd | 10 man/fast.Rd |only man/napping.Rd | 8 man/panelmatch.Rd | 10 man/perfume.Rd |only man/plot.fast.Rd |only man/print.fast.Rd |only man/simulation.Rd | 3 24 files changed, 697 insertions(+), 1024 deletions(-)
Author: Renan Cortes
Diff between RcmdrPlugin.qcc versions 1.0-2 dated 2009-05-04 and 1.0-3 dated 2009-05-05
More information about RcmdrPlugin.qcc at CRAN
Title: Rcmdr qcc Plug-In
Description: This package provides an Rcmdr "plug-in" based on the qcc
package, and it provides an integration between the user and
the tools of SPC.
DESCRIPTION | 6 +++---
inst/etc/menus.txt | 2 +-
man/RcmdrPlugin.qcc-package.Rd | 2 +-
3 files changed, 5 insertions(+), 5 deletions(-)
Permanent link
Author: S original by Matt Wand. R port by Brian Ripley
Diff between KernSmooth versions 2.22-22 dated 2008-01-27 and 2.23-1 dated 2009-05-05
Title: Functions for kernel smoothing for Wand & Jones (1995)
Description: functions for kernel smoothing (and density estimation)
corresponding to the book: Wand, M.P. and Jones, M.C. (1995)
"Kernel Smoothing".
DESCRIPTION | 16
PORTING | 8
R/all.R | 1827 +++++++++++++++++++++++-----------------------------
inst/po |only
man/bkde.Rd | 8
man/bkde2D.Rd | 4
man/bkfe.Rd | 4
man/dpih.Rd | 4
man/dpik.Rd | 9
man/dpill.Rd | 2
man/locpoly.Rd | 11
po/R-KernSmooth.pot | 29
po/R-en@quot.po |only
src/linbin.f | 17
src/rlbin.f | 15
15 files changed, 895 insertions(+), 1059 deletions(-)
Author: Robin K. S. Hankin
Title: Bayesian Analysis of Computer Code Output
Permanent link