Author: Holger Schwender, Arno Fritsch
Title: Analysis of High-Dimensional Categorical Data such as SNP Data
Description: Tools for the analysis of high-dimensional data
developed/implemented at the group "Statistical Complexity
Reduction In Molecular Epidemiology" (SCRIME). Main focus is on
SNP data. But most of the functions can also be applied to
other types of categorical data.
Diff between scrime versions 1.1.4 dated 2009-05-11 and 1.1.6 dated 2009-05-19
DESCRIPTION | 8 ++++---- R/simulateSNPs.R | 39 ++++++++++++++++++++++++++++++--------- inst/CHANGES | 14 ++++++++++++++ man/simulateSNPs.Rd | 24 ++++++++++++++++++------ 4 files changed, 66 insertions(+), 19 deletions(-)
Author: Ben B. Hansen
Diff between optmatch versions 0.4-1 dated 2008-07-05 and 0.5-0 dated 2009-05-19
Title: Functions for optimal matching
Description: Functions for optimal matching, including full matching
ChangeLog | 8 +++
DESCRIPTION | 21 ++++----
R/fullmatch.R | 2
R/matched.distances.R | 3 +
R/pscore.dist.R | 12 +++-
R/stratumStructure.R | 46 +++++++++++++++---
R/summary.optmatch.R | 44 ++++++++++++++++-
ToDo | 2
inst/doc/optmatch.pdf |binary
man/fullmatch.Rd | 2
man/makedist.Rd | 2
man/pscore.dist.Rd | 16 ++++--
man/stratumStructure.Rd | 12 +++-
tests/moremethods.optmatch-tests.Rout.save | 32 ++++++++++++-
tests/pscore-dist.R | 6 +-
tests/pscore-dist.Rout.save | 17 ++++--
tests/stratumStructure-tests.R | 13 ++++-
tests/stratumStructure-tests.Rout.save | 71 ++++++++++++++++++++---------
tests/summary.optmatch-tests.R |only
tests/summary.optmatch-tests.Rout.save |only
20 files changed, 240 insertions(+), 69 deletions(-)
Author: Chris Fraley, Adrian E. Raftery, J. McLean Sloughter, Tilmann
Gneiting, University of Washington With contributions from
Bobby Yuen and Michael Polokowski
Title: Probabilistic Forecasting using Ensembles and Bayesian Model
Averaging
Description: Bayesian Model Averaging to create probabilistic forecasts
from ensemble forecasts and weather observations.
Diff between ensembleBMA versions 4.2.1 dated 2009-05-10 and 4.2.2 dated 2009-05-19
CHANGELOG | 3 ++- DESCRIPTION | 8 ++++---- R/crps.ensembleBMAgamma.R | 3 ++- R/crps.ensembleBMAgamma0.R | 3 ++- R/crps.ensembleBMAnormal.R | 3 ++- 5 files changed, 12 insertions(+), 8 deletions(-)
Author: Michele De Meo
Title: Bethel's algorithm.
Description: The sample size according to the Bethel's procedure.
Diff between bethel versions 0.1 dated 2009-03-27 and 0.2 dated 2009-05-19
bethel-0.1/bethel/doc |only bethel-0.2/bethel/DESCRIPTION | 8 ++++---- bethel-0.2/bethel/inst |only bethel-0.2/bethel/man/bth.Rd | 2 +- 4 files changed, 5 insertions(+), 5 deletions(-)
Author: David Kraus
Title: Tests of the Proportional Hazards Assumption
Description: Tests of the proportional hazards assumption in the Cox
model: data-driven Neyman type smooth tests and score process
based tests for identifying nonproportional covariates and for
global checks.
Diff between proptest versions 0.1-3 dated 2008-02-28 and 0.1-4 dated 2009-05-19
DESCRIPTION | 16 +++++++++------- R/mini.coxph.detail.R | 8 +++++--- R/mini.survfit.coxph.R | 5 +++-- 3 files changed, 17 insertions(+), 12 deletions(-)
Author: Gaston Sanchez
Diff between plspm versions 0.1-2 dated 2009-05-10 and 0.1-3 dated 2009-05-19
Title: Partial Least Squares data analysis methods
Description: Partial Least Squares (PLS) methods with emphasis on
structural equation models with latent variables.
DESCRIPTION | 8 -
R/plot.plsca.R | 3
R/plot.plspm.groups.R | 3
R/pls.efects.R |only
R/pls.loads.R |only
R/pls.paths.R |only
R/pls.weights.R |only
R/plspm.R | 236 +++-----------------------------------------------
R/plspm.groups.R | 157 ---------------------------------
R/plsr1.R |only
man/plspm-internal.Rd |only
man/plspm-package.Rd | 4
man/plspm.Rd | 6 -
13 files changed, 29 insertions(+), 388 deletions(-)
Author: Antoine Lucas
Title: Another Multidimensional Analysis Package
Description: Tools for Clustering and Principal Component Analysis
(With robusts methods, and parallelized functions).
Diff between amap versions 0.8-2 dated 2007-10-03 and 0.8-3 dated 2009-05-19
DESCRIPTION | 17 +++-- R/burt.R | 2 R/dist.R | 2 inst/doc/amap.pdf |binary inst/doc/amap_sdd.tex |only inst/doc/amap_srs.tex |only man/dist.Rd | 4 + man/hcluster.Rd | 6 +- src/Makevars.in | 2 src/burt.c | 10 ++- src/distance_T.cpp | 146 +++++++++++++++++++++++++++++++++++--------------- src/distance_T.h | 16 +++++ src/hclust.cpp | 29 --------- src/hclust.h | 18 +++++- src/hclust_T.cpp | 2 src/hclust_T.h | 13 ++++ 16 files changed, 178 insertions(+), 89 deletions(-)