Author: Philippe Grosjean
Diff between tcltk2 versions 1.0-8 dated 2009-04-24 and 1.0-9 dated 2009-06-28
Title: Tcl/Tk Additions
Description: A series of additional Tk widgets with style and various
functions (under Windows: DDE exchange, access to the registry
and icon manipulation) to supplement the tcltk package.
tcltk2-1.0-8/tcltk2/BinaryFiles |only
tcltk2-1.0-8/tcltk2/R/winSystemFonts.R |only
tcltk2-1.0-8/tcltk2/cleanup |only
tcltk2-1.0-8/tcltk2/inst/doc |only
tcltk2-1.0-8/tcltk2/man/unix/winSystemFonts.Rd |only
tcltk2-1.0-8/tcltk2/man/windows/winSystemFonts.Rd |only
tcltk2-1.0-8/tcltk2/win/bin |only
tcltk2-1.0-8/tcltk2/win/src/winSystemFonts.c |only
tcltk2-1.0-8/tcltk2/win/tklibs/Tktable2.9 |only
tcltk2-1.0-8/tcltk2/win/tklibs/tile0.7.2 |only
tcltk2-1.0-8/tcltk2/win/tklibs/winico0.6/Winico06.dll |only
tcltk2-1.0-9/tcltk2/DESCRIPTION | 8
tcltk2-1.0-9/tcltk2/LICENSE | 1873 +++++++++---------
tcltk2-1.0-9/tcltk2/NAMESPACE | 177 -
tcltk2-1.0-9/tcltk2/NEWS | 49
tcltk2-1.0-9/tcltk2/R/tk2commands.R | 28
tcltk2-1.0-9/tcltk2/R/tk2fonts.R | 21
tcltk2-1.0-9/tcltk2/R/zzz.R | 42
tcltk2-1.0-9/tcltk2/TODO | 109 -
tcltk2-1.0-9/tcltk2/cleanup.win |only
tcltk2-1.0-9/tcltk2/configure.win | 11
tcltk2-1.0-9/tcltk2/inst/CITATION | 6
tcltk2-1.0-9/tcltk2/inst/tklibs/bwidget1.7/ChangeLog | 136 -
tcltk2-1.0-9/tcltk2/inst/tklibs/fonts.tcl | 127 -
tcltk2-1.0-9/tcltk2/man/tcltk2-package.Rd | 12
tcltk2-1.0-9/tcltk2/man/tk2fonts.Rd | 8
tcltk2-1.0-9/tcltk2/man/windows/tk2dde.Rd | 7
tcltk2-1.0-9/tcltk2/win/src/Makevars |only
tcltk2-1.0-9/tcltk2/win/src/Winico06.c |only
29 files changed, 1338 insertions(+), 1276 deletions(-)
Author: Philippe Grosjean, Romain Francois & Kamil Barton
Title: SciViews GUI API - Miscellaneous functions
Description: Supporting functions for the GUI API (various utilitary
functions)
Diff between svMisc versions 0.9-46 dated 2009-01-23 and 0.9-48 dated 2009-06-28
DESCRIPTION | 29 +- NEWS | 10 R/Args.R | 3 R/CallTip.R | 3 R/Complete.R | 3 R/CompletePlus.R | 120 ++++------ R/Parse.R | 17 + R/Sys.tempdir.R | 3 R/Sys.userdir.R | 3 R/TempEnv.R | 3 R/addItems.R | 26 +- R/addTemp.R | 5 R/assignTemp.R | 2 R/captureAll.R | 36 +-- R/changeTemp.R | 3 R/clipsource.R | 7 R/compareRVersion.R | 3 R/def.R | 13 - R/descFun.R | 63 ++--- R/existsTemp.R | 2 R/getEnvironment.R | 3 R/getTemp.R | 5 R/guiCmd.R | 17 - R/helpSearchWeb.R | 4 R/isAqua.R | 3 R/isHelp.R | 5 R/isMac.R | 3 R/isRgui.R | 3 R/isSDI.R | 5 R/isWin.R | 3 R/listMethods.R | 19 - R/listTypes.R | 10 R/objBrowse.R | 9 R/objClear.R | 6 R/objDir.R | 3 R/objInfo.R | 11 R/objList.R | 585 ++++++++++++++++++++++++++-------------------------- R/objMenu.R | 43 +-- R/objSearch.R | 10 R/progress.R | 15 - R/r.R | 8 R/rmTemp.R | 3 R/svMisc-internal.R | 78 ++++-- R/tempvar.R | 4 man/captureAll.Rd | 4 man/objBrowse.Rd | 21 + 46 files changed, 653 insertions(+), 581 deletions(-)
Author: Heloise Lavigne and Aurelien Proye and Jean-Pierre Gattuso.
Portions of code and/or corrections were contributed by
Jean-Marie Epitalon, Andreas Hofmann, Bernard Gentili, Jim Orr
and Karline Soetaert
Title: Calculates parameters of the seawater carbonate system
Description: Calculates parameters of the seawater carbonate system
Diff between seacarb versions 2.1.2 dated 2009-05-25 and 2.1.3 dated 2009-06-28
seacarb-2.1.2/seacarb/R/pHinsi.R |only seacarb-2.1.2/seacarb/data/seacarb_test.txt |only seacarb-2.1.3/seacarb/ChangeLog | 14 ++++++++++++++ seacarb-2.1.3/seacarb/DESCRIPTION | 10 ++++------ seacarb-2.1.3/seacarb/R/carb.R | 10 +++++----- seacarb-2.1.3/seacarb/R/pHinsi.r |only seacarb-2.1.3/seacarb/README |only seacarb-2.1.3/seacarb/data/seacarb_test_P0.txt |only seacarb-2.1.3/seacarb/data/seacarb_test_P300.txt |only seacarb-2.1.3/seacarb/man/carb.Rd | 17 +++++++++-------- seacarb-2.1.3/seacarb/man/pCa.Rd | 3 +++ seacarb-2.1.3/seacarb/man/pTA.Rd | 3 +-- seacarb-2.1.3/seacarb/man/pgas.Rd | 3 +-- seacarb-2.1.3/seacarb/man/pmix.Rd | 3 +-- seacarb-2.1.3/seacarb/man/ppH.Rd | 3 +-- seacarb-2.1.3/seacarb/man/seacarb_test_P0.Rd |only seacarb-2.1.3/seacarb/man/seacarb_test_P300.Rd |only 17 files changed, 39 insertions(+), 27 deletions(-)
Author: Richard Bourgon
Diff between intervals versions 0.12.1 dated 2009-06-14 and 0.12.2 dated 2009-06-28
Title: Tools for working with points and intervals
Description: Tools for working with and comparing sets of points and
intervals.
DESCRIPTION | 10 +++++-----
NAMESPACE | 7 ++++++-
man/Intervals_virtual_or_numeric-class.Rd |only
3 files changed, 11 insertions(+), 6 deletions(-)
Author: Patrick E. Meyer
Title: Information-Theoretic Measures
Description: This package implements various measures of information
theory based on several implemented entropy estimators.
Diff between infotheo versions 1.0.1 dated 2009-06-26 and 1.0.2 dated 2009-06-28
CHANGES | 3 ++- DESCRIPTION | 6 +++--- src/entropy.cpp | 4 ++-- 3 files changed, 7 insertions(+), 6 deletions(-)
Author: Søren Højsgaard
Diff between gRbase versions 1.1.0 dated 2009-04-26 and 1.1.2 dated 2009-06-28
Title: A package for graphical modelling in R
Description: The gRbase package provides certain general constructs
which are used by other graphical modelling packages. This
includes 1) the concept of gmData (graphical meta data), 2)
several graph algorithms 3) facilities for table operations, 4)
functions for testing for conditional independence. gRbase also
illustrates how hierarchical log-linear models (hllm) may be
implemented.
gRbase-1.1.0/gRbase/src/triangmcwh.c |only
gRbase-1.1.2/gRbase/ChangeLog | 11 ++
gRbase-1.1.2/gRbase/DESCRIPTION | 6 -
gRbase-1.1.2/gRbase/R/GraphAlgo-mcs.R | 2
gRbase-1.1.2/gRbase/R/GraphAlgo-rip.R | 130 +++++++++++++++-----------------
gRbase-1.1.2/gRbase/inst/doc/gRbase.pdf |binary
gRbase-1.1.2/gRbase/src/triangmcwh2.c |only
7 files changed, 74 insertions(+), 75 deletions(-)
Author: Reinhard Harter, Kurt Hornik and Stefan Theussl
Title: Symphony in R
Description: An R interface to the SYMPHONY MILP solver (version
5.1.10).
Diff between Rsymphony versions 0.1-8 dated 2009-03-19 and 0.1-9 dated 2009-06-28
DESCRIPTION | 9 src/R_symphony.cc | 3 src/SYMPHONY/BuildTools/coin.m4 | 105 + src/SYMPHONY/BuildTools/commit_new_release | 51 src/SYMPHONY/BuildTools/prepare_new_release | 648 ++++++-- src/SYMPHONY/Cgl/MSVisualStudio/v8/libCgl/libCgl.vcproj | 1 src/SYMPHONY/Cgl/configure | 20 src/SYMPHONY/Cgl/configure.ac | 4 src/SYMPHONY/Cgl/src/CglPreProcess/CglPreProcess.cpp | 39 src/SYMPHONY/Cgl/src/CglProbing/CglProbing.cpp | 21 src/SYMPHONY/Clp/MSVisualStudio/v8/clp/clp.vcproj | 1 src/SYMPHONY/Clp/MSVisualStudio/v8/libClp/libClp.vcproj | 1 src/SYMPHONY/Clp/MSVisualStudio/v9 |only src/SYMPHONY/Clp/configure | 20 src/SYMPHONY/Clp/configure.ac | 4 src/SYMPHONY/Clp/src/ClpPackedMatrix.cpp | 2 src/SYMPHONY/Clp/src/ClpPresolve.cpp | 30 src/SYMPHONY/Clp/src/ClpSimplex.cpp | 12 src/SYMPHONY/Clp/src/ClpSimplexDual.cpp | 164 +- src/SYMPHONY/Clp/src/ClpSimplexPrimal.cpp | 5 src/SYMPHONY/CoinUtils/AUTHORS | 5 src/SYMPHONY/CoinUtils/MSVisualStudio/v8/libCoinUtils/libCoinUtils.vcproj | 1 src/SYMPHONY/CoinUtils/MSVisualStudio/v9 |only src/SYMPHONY/CoinUtils/configure | 20 src/SYMPHONY/CoinUtils/configure.ac | 4 src/SYMPHONY/CoinUtils/src/CoinHelperFunctions.hpp | 2 src/SYMPHONY/CoinUtils/src/CoinLpIO.cpp | 6 src/SYMPHONY/CoinUtils/src/CoinPackedMatrix.cpp | 2 src/SYMPHONY/CoinUtils/src/CoinPresolveDoubleton.cpp | 2 src/SYMPHONY/CoinUtils/src/CoinPresolveDual.cpp | 3 src/SYMPHONY/CoinUtils/src/CoinPresolveTripleton.cpp | 3 src/SYMPHONY/Data/Sample/configure | 20 src/SYMPHONY/Data/Sample/configure.ac | 4 src/SYMPHONY/Externals | 20 src/SYMPHONY/FlopC++/configure | 137 + src/SYMPHONY/FlopC++/configure.ac | 2 src/SYMPHONY/Osi/MSVisualStudio/v8/libOsi/libOsi.vcproj | 1 src/SYMPHONY/Osi/MSVisualStudio/v8/libOsiCbc/libOsiCbc.vcproj | 1 src/SYMPHONY/Osi/MSVisualStudio/v8/libOsiClp/libOsiClp.vcproj | 1 src/SYMPHONY/Osi/MSVisualStudio/v8/libOsiSym/libOsiSym.vcproj | 4 src/SYMPHONY/Osi/MSVisualStudio/v8/libOsiVol/libOsiVol.vcproj | 1 src/SYMPHONY/Osi/src/OsiClp/OsiClpSolverInterface.cpp | 6 src/SYMPHONY/Osi/src/OsiCuts.hpp | 9 src/SYMPHONY/Osi/src/OsiPresolve.cpp | 4 src/SYMPHONY/SYMPHONY/MSVisualStudio/sym.mak | 764 ++++------ src/SYMPHONY/SYMPHONY/configure | 20 src/SYMPHONY/SYMPHONY/configure.ac | 2 src/SYMPHONY/ThirdParty/Blas/configure | 20 src/SYMPHONY/ThirdParty/Blas/configure.ac | 4 src/SYMPHONY/ThirdParty/Glpk/INSTALL.Glpk | 8 src/SYMPHONY/ThirdParty/Glpk/Makefile.am | 10 src/SYMPHONY/ThirdParty/Glpk/Makefile.in | 80 - src/SYMPHONY/ThirdParty/Glpk/configure | 9 src/SYMPHONY/ThirdParty/Glpk/configure.ac | 9 src/SYMPHONY/ThirdParty/Glpk/get.Glpk | 2 src/SYMPHONY/ThirdParty/Glpk/glpk.patch | 8 src/SYMPHONY/ThirdParty/Lapack/Makefile.am | 2 src/SYMPHONY/ThirdParty/Lapack/configure | 117 - src/SYMPHONY/ThirdParty/Lapack/configure.ac | 39 src/SYMPHONY/configure | 20 src/SYMPHONY/configure.ac | 4 61 files changed, 1612 insertions(+), 904 deletions(-)
Author: Ulrike Groemping
Title: Fractional Factorial designs with 2-level factors
Description: This package creates regular and non-regular Fractional
Factorial designs. Furthermore, analysis tools for Fractional
Factorial designs with 2-level factors are offered (main
effects and interaction plots for all factors simultaneously,
cube plot for looking at the simultaneous effects of three
factors, full or half normal plot, alias structure in a more
readable format than with the built-in function alias). The
package is currently subject to intensive development. While
much of the intended functionality is already available, some
changes and improvements are still to be expected. Suggestions
are welcome.
Diff between FrF2 versions 0.93 dated 2009-05-25 and 0.94 dated 2009-06-28
DESCRIPTION | 8 - R/DanielPlot.R | 2 R/FrF2.R | 30 +++- R/MEPlot.R | 14 +- R/blockpick.R | 12 + R/leftadjust.R | 12 + R/pb.R | 3 R/remodel.R | 28 ++-- R/splitpick.R | 10 + R/utilcat.R | 75 +++++++++-- inst/NEWS | 23 +++ man/FrF2.Rd | 304 +++++++++++------------------------------------ man/IAPlot.Rd | 23 ++- man/block.Rd |only man/estimable.2fis.Rd |only man/pb.Rd | 22 +++ man/splitplot.Rd |only tests/FrF2test.R | 4 tests/FrF2test.Rout.save | 66 ++++++++-- 19 files changed, 328 insertions(+), 308 deletions(-)
Author: Ulrike Groemping
Title: Full factorials, orthogonal arrays and base utilities for DoE
packages
Description: This package creates full factorial experimental designs
and designs based on orthogonal arrays for (industrial)
experiments. Additionally, it provides some utility functions
used also by other DoE packages.
Diff between DoE.base versions 0.2 dated 2009-05-27 and 0.3 dated 2009-06-28
DESCRIPTION | 12 +++--- R/fac.design.R | 3 + R/oa.design.R | 3 + inst/NEWS | 7 +++ man/DoE.base-package.Rd | 1 man/class-design.Rd | 46 +++++++++++++++---------- man/export.design.Rd | 11 ++---- man/oa.design.Rd | 85 +++++++++++++++++++++++++++++++++++++----------- 8 files changed, 117 insertions(+), 51 deletions(-)