Author: Roeland Kindt
Title: GUI for biodiversity and community ecology analysis
Description: This package provides a GUI (Graphical User Interface, via
the R-Commander) and some utility functions (often based on the
vegan package) for statistical analysis of biodiversity and
ecological communities, including species accumulation curves,
diversity indices, Renyi profiles, GLMs for analysis of species
abundance and presence-absence, distance matrices, Mantel
tests, and cluster, constrained and unconstrained ordination
analysis. A book on biodiversity and community ecology analysis
is available for free download from the website.
Diff between BiodiversityR versions 1.2 dated 2008-05-13 and 1.3 dated 2009-07-03
DESCRIPTION | 40 ++++++++++----- R/caprescale.R | 109 ++++++++++++++++++++++--------------------- R/diversityresult.R | 1 inst/etc/BiodiversityGUI.R | 80 +++++++++++++++---------------- man/BiodiversityR-package.Rd | 8 +-- man/BiodiversityRGUI.Rd | 2 man/caprescale.Rd | 11 ++-- man/diversityresult.Rd | 2 man/rankabundance.Rd | 2 9 files changed, 138 insertions(+), 117 deletions(-)
Author: Philippe Grosjean
Diff between tcltk2 versions 1.0-9 dated 2009-06-28 and 1.1-0 dated 2009-07-03
Title: Tcl/Tk Additions
Description: A series of additional Tcl commands and Tk widgets with
style and various functions (under Windows: DDE exchange,
access to the registry and icon manipulation) to supplement the
tcltk package.
tcltk2-1.0-9/tcltk2/R/zzz.R |only
tcltk2-1.0-9/tcltk2/inst/tklibs/balloon1.2 |only
tcltk2-1.0-9/tcltk2/inst/tklibs/bwidget1.7 |only
tcltk2-1.0-9/tcltk2/inst/tklibs/ctext3.1 |only
tcltk2-1.0-9/tcltk2/inst/tklibs/cursor0.1 |only
tcltk2-1.0-9/tcltk2/inst/tklibs/toolbar1.0 |only
tcltk2-1.1-0/tcltk2/DESCRIPTION | 16
tcltk2-1.1-0/tcltk2/NAMESPACE | 16
tcltk2-1.1-0/tcltk2/NEWS | 23 +
tcltk2-1.1-0/tcltk2/R/tclTask.R |only
tcltk2-1.1-0/tcltk2/R/tcltk2-Internal.R |only
tcltk2-1.1-0/tcltk2/R/tk2commands.R | 141 +------
tcltk2-1.1-0/tcltk2/R/tk2ico.R | 95 ++---
tcltk2-1.1-0/tcltk2/R/tk2tip.R | 9
tcltk2-1.1-0/tcltk2/R/tk2widgets.R | 329 ++++++------------
tcltk2-1.1-0/tcltk2/cleanup.win | 11
tcltk2-1.1-0/tcltk2/inst/tklibs/Diagrams0.2 |only
tcltk2-1.1-0/tcltk2/inst/tklibs/autoscroll1.1 |only
tcltk2-1.1-0/tcltk2/inst/tklibs/ctext3.2 |only
tcltk2-1.1-0/tcltk2/inst/tklibs/cursor0.2 |only
tcltk2-1.1-0/tcltk2/inst/tklibs/datefield0.2 |only
tcltk2-1.1-0/tcltk2/inst/tklibs/getstring0.1 |only
tcltk2-1.1-0/tcltk2/inst/tklibs/history0.1 |only
tcltk2-1.1-0/tcltk2/inst/tklibs/ico1.0 |only
tcltk2-1.1-0/tcltk2/inst/tklibs/ipentry0.3 |only
tcltk2-1.1-0/tcltk2/inst/tklibs/khim1.0 |only
tcltk2-1.1-0/tcltk2/inst/tklibs/ntext0.81 |only
tcltk2-1.1-0/tcltk2/inst/tklibs/snit1.0 |only
tcltk2-1.1-0/tcltk2/inst/tklibs/swaplist0.2 |only
tcltk2-1.1-0/tcltk2/inst/tklibs/tablelist4.10 |only
tcltk2-1.1-0/tcltk2/inst/tklibs/tooltip1.4 |only
tcltk2-1.1-0/tcltk2/inst/tklibs/widget3.0 |only
tcltk2-1.1-0/tcltk2/man/setLanguage.Rd | 6
tcltk2-1.1-0/tcltk2/man/tclTask.Rd |only
tcltk2-1.1-0/tcltk2/man/tk2commands.Rd | 46 --
tcltk2-1.1-0/tcltk2/man/tk2widgets.Rd | 68 +--
tcltk2-1.1-0/tcltk2/test.R |only
tcltk2-1.1-0/tcltk2/win/tklibs/winico0.6/pkgIndex.tcl | 3
38 files changed, 292 insertions(+), 471 deletions(-)
Author: S original by James J. Majure
Diff between sgeostat versions 1.0-21 dated 2007-04-11 and 1.0-22 dated 2009-07-03
Title: An Object-oriented Framework for Geostatistical Modeling in S+
Description: An Object-oriented Framework for Geostatistical Modeling
in S+
ChangeLog | 25 +++++++++++++++++--------
DESCRIPTION | 16 ++++++++++------
LICENSE |only
man/identify.point.Rd | 2 +-
man/plot.point.Rd | 3 ++-
man/plot.variogram.Rd | 2 +-
man/print.pair.Rd | 2 +-
man/print.point.Rd | 2 +-
8 files changed, 33 insertions(+), 19 deletions(-)
Author: Steven Kembel
Diff between picante versions 0.7-0 dated 2009-05-24 and 0.7-1 dated 2009-07-03
Title: R tools for integrating phylogenies and ecology
Description: Phylocom integration, community analyses, null-models,
traits and evolution in R
DESCRIPTION | 8 ++++----
R/phylodiversity.R | 34 ++++++++++++++++++++++++++++++++--
man/pd.Rd | 8 +++++---
man/picante-package.Rd | 4 ++--
man/ses.pd.Rd |only
man/utility.Rd | 5 ++++-
6 files changed, 47 insertions(+), 12 deletions(-)
Author: Florian Camphausen, Matthias Kohl, Peter Ruckdeschel, Thomas
Stabla
Title: Documentation for packages distr, distrEx, distrSim, distrTEst
Description: provides documentation in form of a common vignette to
packages distr, distrEx, distrMod, distrSim, distrTEst
Diff between distrDoc versions 2.1 dated 2009-04-15 and 2.1.1 dated 2009-07-03
DESCRIPTION | 8 inst/doc/Rplots.pdf | 3924 ++++----- inst/doc/distr.Rnw | 6 inst/doc/distr.pdf |21622 ++++++++++++++++++++++++++++++++++------------------ 4 files changed, 16438 insertions(+), 9122 deletions(-)
Author: Florian Camphausen, Matthias Kohl, Peter Ruckdeschel, Thomas
Stabla
Title: Object orientated implementation of distributions
Description: Object orientated implementation of distributions
Diff between distr versions 2.1.1 dated 2009-06-17 and 2.1.3 dated 2009-07-03
distr-2.1.1/distr/inst/doc/.build.timestamp |only distr-2.1.1/distr/inst/doc/newDistributions-AbscDist.eps |only distr-2.1.1/distr/inst/doc/newDistributions-AbscDist.pdf |only distr-2.1.1/distr/inst/doc/newDistributions-DiscrDist.eps |only distr-2.1.1/distr/inst/doc/newDistributions-DiscrDist.pdf |only distr-2.1.1/distr/inst/doc/newDistributions-exam1.eps |only distr-2.1.1/distr/inst/doc/newDistributions-exam1.pdf |only distr-2.1.1/distr/inst/doc/newDistributions.tex |only distr-2.1.3/distr/DESCRIPTION | 14 +- distr-2.1.3/distr/inst/doc/Rplots.pdf | 72 +++++++------- distr-2.1.3/distr/inst/doc/newDistributions.Rnw | 10 + distr-2.1.3/distr/inst/doc/newDistributions.pdf |binary 12 files changed, 51 insertions(+), 45 deletions(-)
Author: Valerie Obenchain
Title: Data retrieval from a Labkey database
Description: This package imports data from a labkey database into an R
data frame
Diff between Rlabkey versions 0.0.7 dated 2009-04-01 and 0.0.8 dated 2009-07-03
Rlabkey-0.0.7/Rlabkey/license |only Rlabkey-0.0.8/Rlabkey/DESCRIPTION | 10 - Rlabkey-0.0.8/Rlabkey/LICENSE |only Rlabkey-0.0.8/Rlabkey/NEWS | 5 Rlabkey-0.0.8/Rlabkey/R/labkey.executeSql.R | 120 +++++++++---------- Rlabkey-0.0.8/Rlabkey/R/labkey.selectRows.R | 156 ++++++++++++------------- Rlabkey-0.0.8/Rlabkey/R/makeFilter.R | 97 +++++++-------- Rlabkey-0.0.8/Rlabkey/man/Rlabkey-package.Rd | 4 Rlabkey-0.0.8/Rlabkey/man/labkey.executeSql.Rd | 16 +- Rlabkey-0.0.8/Rlabkey/man/makeFilter.Rd | 4 10 files changed, 209 insertions(+), 203 deletions(-)