Mon, 27 Jul 2009

Package spatstat updated to version 1.16-1 with previous version 1.16-0 dated 2009-07-02

Author: Adrian Baddeley and Rolf Turner , with substantial contributions of code by Marie-Colette van Lieshout, Rasmus Waagepetersen, Kasper Klitgaard Berthelsen and Dominic Schuhmacher. Additional contributions by Ang Qi Wei, C. Beale, B. Biggerstaff, R. Bivand, F. Bonneu, J. Burgos, J.B. Chen, Y.C. Chin, M. de la Cruz, P.J. Diggle, S. Eglen, A. Gault, M. Genton, P. Grabarnik, C. Graf, J. Franklin, U. Hahn, M. Hering, M.B. Hansen, M. Hazelton, J. Heikkinen, K. Hornik, R. Ihaka, R. John-Chandran, D. Johnson, J. Laake, J. Mateu, P. McCullagh, X.C. Mi, J. Moller, L.S. Nielsen, E. Parilov, J. Picka, M. Reiter, B.D. Ripley, B. Rowlingson, J. Rudge, A. Sarkka, K. Schladitz, B.T. Scott, I.-M. Sintorn, M. Spiess, M. Stevenson, P. Surovy, B. Turlach, A. van Burgel, H. Wang and S. Wong.
Title: Spatial Point Pattern analysis, model-fitting, simulation, tests
Description: A package for analysing spatial data, mainly Spatial Point Patterns, including multitype/marked points and spatial covariates, in any two-dimensional spatial region. Contains functions for plotting spatial data, exploratory data analysis, model-fitting, simulation, spatial sampling, model diagnostics, and formal inference. Data types include point patterns, line segment patterns, spatial windows, and pixel images. Point process models can be fitted to point pattern data. Cluster type models are fitted by the method of minimum contrast. Very general Gibbs point process models can be fitted to point pattern data using a function ppm similar to lm or glm. Models may include dependence on covariates, interpoint interaction and dependence on marks. Fitted models can be simulated automatically. Also provides facilities for formal inference (such as chi-squared tests) and model diagnostics (including simulation envelopes, residuals, residual plots and Q-Q plots).

Diff between spatstat versions 1.16-0 dated 2009-07-02 and 1.16-1 dated 2009-07-27

 spatstat-1.16-0/spatstat/.Rbuildindex.5299       |only
 spatstat-1.16-0/spatstat/.Rbuildindex.5904       |only
 spatstat-1.16-0/spatstat/.Rbuildindex.6375       |only
 spatstat-1.16-0/spatstat/man/closing.owin.Rd     |only
 spatstat-1.16-0/spatstat/man/dilate.owin.Rd      |only
 spatstat-1.16-0/spatstat/man/erode.owin.Rd       |only
 spatstat-1.16-0/spatstat/man/opening.owin.Rd     |only
 spatstat-1.16-1/spatstat/DESCRIPTION             |    8 
 spatstat-1.16-1/spatstat/INDEX                   |   16 
 spatstat-1.16-1/spatstat/R/Fest.S                |   10 
 spatstat-1.16-1/spatstat/R/Gest.S                |   10 
 spatstat-1.16-1/spatstat/R/Gmulti.S              |   16 
 spatstat-1.16-1/spatstat/R/Iest.R                |   12 
 spatstat-1.16-1/spatstat/R/Jest.S                |   14 
 spatstat-1.16-1/spatstat/R/Jmulti.S              |   18 
 spatstat-1.16-1/spatstat/R/Kest.S                |   67 +-
 spatstat-1.16-1/spatstat/R/Kinhom.S              |   12 
 spatstat-1.16-1/spatstat/R/Kmulti.S              |   18 
 spatstat-1.16-1/spatstat/R/Kmulti.inhom.R        |   12 
 spatstat-1.16-1/spatstat/R/bermantest.R          |only
 spatstat-1.16-1/spatstat/R/blur.R                |    9 
 spatstat-1.16-1/spatstat/R/defaultwin.R          |    6 
 spatstat-1.16-1/spatstat/R/diagnoseppm.R         |    2 
 spatstat-1.16-1/spatstat/R/distbdry.S            |  164 -----
 spatstat-1.16-1/spatstat/R/effectfun.R           |   18 
 spatstat-1.16-1/spatstat/R/envelope.R            |   71 +-
 spatstat-1.16-1/spatstat/R/eval.fv.R             |    4 
 spatstat-1.16-1/spatstat/R/images.R              |   13 
 spatstat-1.16-1/spatstat/R/kppm.R                |   43 +
 spatstat-1.16-1/spatstat/R/kstest.R              |   20 
 spatstat-1.16-1/spatstat/R/localK.R              |   18 
 spatstat-1.16-1/spatstat/R/markcorr.R            |    8 
 spatstat-1.16-1/spatstat/R/mincontrast.R         |   18 
 spatstat-1.16-1/spatstat/R/morphology.R          |only
 spatstat-1.16-1/spatstat/R/pcf.R                 |   10 
 spatstat-1.16-1/spatstat/R/plot.fv.R             |   68 +-
 spatstat-1.16-1/spatstat/R/ppp.S                 |    3 
 spatstat-1.16-1/spatstat/R/psp.R                 |    4 
 spatstat-1.16-1/spatstat/R/quadclass.S           |    6 
 spatstat-1.16-1/spatstat/R/rmh.R                 |    4 
 spatstat-1.16-1/spatstat/R/rmh.ppm.R             |   31 -
 spatstat-1.16-1/spatstat/R/rshift.R              |    6 
 spatstat-1.16-1/spatstat/R/window.S              |  103 ++-
 spatstat-1.16-1/spatstat/R/wingeom.S             |   71 ++
 spatstat-1.16-1/spatstat/R/xypolygon.S           |    4 
 spatstat-1.16-1/spatstat/inst/doc/shapefiles.pdf |  703 ++++++++++-------------
 spatstat-1.16-1/spatstat/man/00spatstat.Rd       |   32 -
 spatstat-1.16-1/spatstat/man/Kest.Rd             |   21 
 spatstat-1.16-1/spatstat/man/Replace.im.Rd       |    4 
 spatstat-1.16-1/spatstat/man/alltypes.Rd         |    3 
 spatstat-1.16-1/spatstat/man/area.owin.Rd        |    4 
 spatstat-1.16-1/spatstat/man/as.mask.Rd          |    1 
 spatstat-1.16-1/spatstat/man/as.polygonal.Rd     |only
 spatstat-1.16-1/spatstat/man/bdist.pixels.Rd     |    2 
 spatstat-1.16-1/spatstat/man/bdist.points.Rd     |    2 
 spatstat-1.16-1/spatstat/man/bermantest.Rd       |only
 spatstat-1.16-1/spatstat/man/clarkevans.Rd       |    2 
 spatstat-1.16-1/spatstat/man/closing.Rd          |only
 spatstat-1.16-1/spatstat/man/copper.Rd           |    9 
 spatstat-1.16-1/spatstat/man/diagnose.ppm.Rd     |    6 
 spatstat-1.16-1/spatstat/man/diameter.Rd         |    2 
 spatstat-1.16-1/spatstat/man/dilation.Rd         |only
 spatstat-1.16-1/spatstat/man/distmap.psp.Rd      |   17 
 spatstat-1.16-1/spatstat/man/envelope.Rd         |   54 +
 spatstat-1.16-1/spatstat/man/eroded.areas.Rd     |    4 
 spatstat-1.16-1/spatstat/man/erosion.Rd          |only
 spatstat-1.16-1/spatstat/man/internal.Rd         |   22 
 spatstat-1.16-1/spatstat/man/is.empty.Rd         |only
 spatstat-1.16-1/spatstat/man/kstest.Rd           |    6 
 spatstat-1.16-1/spatstat/man/lgcp.estK.Rd        |   15 
 spatstat-1.16-1/spatstat/man/matclust.estK.Rd    |   15 
 spatstat-1.16-1/spatstat/man/mincontrast.Rd      |   10 
 spatstat-1.16-1/spatstat/man/murchison.Rd        |    2 
 spatstat-1.16-1/spatstat/man/nearestsegment.Rd   |    3 
 spatstat-1.16-1/spatstat/man/opening.Rd          |only
 spatstat-1.16-1/spatstat/man/owin.object.Rd      |   14 
 spatstat-1.16-1/spatstat/man/perimeter.Rd        |only
 spatstat-1.16-1/spatstat/man/plot.kppm.Rd        |   21 
 spatstat-1.16-1/spatstat/man/plot.kstest.Rd      |only
 spatstat-1.16-1/spatstat/man/plot.owin.Rd        |    2 
 spatstat-1.16-1/spatstat/man/rmh.ppm.Rd          |    1 
 spatstat-1.16-1/spatstat/man/rshift.ppp.Rd       |    4 
 spatstat-1.16-1/spatstat/man/setcov.Rd           |    2 
 spatstat-1.16-1/spatstat/man/simulate.kppm.Rd    |   28 
 spatstat-1.16-1/spatstat/man/simulate.ppm.Rd     |only
 spatstat-1.16-1/spatstat/man/thomas.estK.Rd      |   15 
 86 files changed, 1135 insertions(+), 808 deletions(-)

More information about spatstat at CRAN
Permanent link

New package parser with initial version 0.0-2
Package: parser
Type: Package
Title: Detailed R source code parser
Version: 0.0-2
Date: 2009-07-24
Author: Romain Francois
Maintainer: Romain Francois
Description: detailed source code parser, based on the standard R parser but organizing the information differently
License: GPL (>= 3)
Depends: R (>= 2.9)
Repository: CRAN
Repository/R-Forge/Project: highlight
Repository/R-Forge/Revision: 187
Date/Publication: 2009-07-27 19:54:03
Packaged: 2009-07-26 21:12:49 UTC; rforge

More information about parser at CRAN
Permanent link

Package ReadImages updated to version 0.1.3 with previous version 0.1.2 dated 2009-05-27

Author: Markus Loecher
Title: Image Reading Module for R
Description: This package provides functions for reading JPEG and PNG files. This package requires libjpeg . This package can be used on Unixes / MacOS X / Windows.

Diff between ReadImages versions 0.1.2 dated 2009-05-27 and 0.1.3 dated 2009-07-27

 ReadImages-0.1.2/ReadImages/src/Makevars.win          |only
 ReadImages-0.1.3/ReadImages/DESCRIPTION               |    8 
 ReadImages-0.1.3/ReadImages/README                    |    8 
 ReadImages-0.1.3/ReadImages/configure                 | 5109 ++++++++++--------
 ReadImages-0.1.3/ReadImages/man/ReadImages-package.Rd |    4 
 5 files changed, 3013 insertions(+), 2116 deletions(-)

More information about ReadImages at CRAN
Permanent link

Package psych updated to version 1.0-77 with previous version 1.0-76 dated 2009-07-18

Author: William Revelle
Title: Procedures for Psychological, Psychometric, and Personality Research
Description: A number of routines for personality, psychometrics and experimental psychology. Functions are primarily for scale construction using factor analysis, cluster analysis and reliability analysis, although others provide basic descriptive statistics. Functions for simulating particular item and test structures are included. Several functions serve as a useful front end for structural equation modeling. For more information, see the personality-project.org/r webpage.

Diff between psych versions 1.0-76 dated 2009-07-18 and 1.0-77 dated 2009-07-27

 CHANGES                    |    7 
 DESCRIPTION                |    8 
 R/error.bars.R             |   21 
 R/error.bars.by.R          |    4 
 R/factor.rotate.R          |   11 
 R/polar.R                  |   36 
 R/print.psych.fa.R         |   17 
 inst/NEWS                  |    5 
 inst/doc/overview.pdf      | 3033 ++--
 inst/doc/psych_for_sem.pdf | 1773 +-
 inst/doc/psych_manual.pdf  |28870 ++++++++++++++++++++++-----------------------
 man/00.psych-package.Rd    |    4 
 man/factor.rotate.Rd       |   35 
 man/r.test.Rd              |    8 
 14 files changed, 17223 insertions(+), 16609 deletions(-)

More information about psych at CRAN
Permanent link

Package pgirmess updated to version 1.3.9 with previous version 1.3.8 dated 2009-01-26

Author: Patrick Giraudoux
Title: Data analysis in ecology
Description: Miscellaneous functions for analysis and display of ecological and spatial data

Diff between pgirmess versions 1.3.8 dated 2009-01-26 and 1.3.9 dated 2009-07-27

 DESCRIPTION    |   28 +++++++++++++++-------------
 R/selMod.r     |    1 +
 man/dirProj.rd |    2 +-
 man/dirSeg.rd  |    2 +-
 man/selMod.Rd  |    6 +++---
 5 files changed, 21 insertions(+), 18 deletions(-)

More information about pgirmess at CRAN
Permanent link

Package homals updated to version 0.9-11 with previous version 0.9-10 dated 2009-02-23

Author: Jan de Leeuw, Patrick Mair
Title: Gifi Methods
Description: This package performs a homogeneity analysis and various extensions. Rank restrictions on the category quantifications can be imposed (nonlinear PCA). The categories are transformed by means of optimal scaling with options for nominal, ordinal, and numerical scale levels (for rank-1 restrictions). Variables can be grouped into sets, in order to emulate regression analysis and canonical correlation analysis.

Diff between homals versions 0.9-10 dated 2009-02-23 and 0.9-11 dated 2009-07-27

 homals-0.9-10/homals/inst/doc/Rplots.pdf  |only
 homals-0.9-10/homals/inst/doc/homalsR.dvi |only
 homals-0.9-11/homals/DESCRIPTION          |   36 
 homals-0.9-11/homals/R/homals.R           |   43 
 homals-0.9-11/homals/R/normX.R            |   12 
 homals-0.9-11/homals/R/plot.homals.R      |  102 -
 homals-0.9-11/homals/inst/doc/homalsR.bbl |only
 homals-0.9-11/homals/inst/doc/homalsR.blg |only
 homals-0.9-11/homals/inst/doc/homalsR.pdf | 2385 ++++++++++++++----------------
 homals-0.9-11/homals/man/plot.homals.Rd   |    3 
 10 files changed, 1285 insertions(+), 1296 deletions(-)

More information about homals at CRAN
Permanent link

Package TShistQuote updated to version 2009.7-1 with previous version 2009.1-1 dated 2009-02-24

Author: Paul Gilbert
Title: Time Series Database Interface extensions for get.hist.quote
Description: Provides methods for generics in the TSdbi package to retrieve data from historical quote URLs.

Diff between TShistQuote versions 2009.1-1 dated 2009-02-24 and 2009.7-1 dated 2009-07-27

 TShistQuote-2009.1-1/TShistQuote/Rplots.pdf               |only
 TShistQuote-2009.7-1/TShistQuote/DESCRIPTION              |   21 ++++++++-----
 TShistQuote-2009.7-1/TShistQuote/NEWS                     |   22 +++++++++++++-
 TShistQuote-2009.7-1/TShistQuote/R/TSdbiMethods.R         |   20 +++++++-----
 TShistQuote-2009.7-1/TShistQuote/inst/doc/TShistQuote.pdf |binary
 TShistQuote-2009.7-1/TShistQuote/man/TSdbiMethods.Rd      |    4 +-
 6 files changed, 49 insertions(+), 18 deletions(-)

More information about TShistQuote at CRAN
Permanent link


Built and running on Debian GNU/Linux using R, littler and blosxom. Styled with Bootstrap.