Sun, 16 Aug 2009

Package topmodel updated to version 0.7.0 with previous version 0.6.2 dated 2009-05-17

Author: Wouter Buytaert
Title: Implementation of the hydrological model TOPMODEL in R
Description: Set of hydrological functions including an R implementation of the hydrological model TOPMODEL, which is based on the 1995 FORTRAN version by Keith Beven. From version 0.7.0, the package is put into maintenance mode. New functions for hydrological analysis are now developed as part of the RHydro package. RHydro can be found on R-forge and is built on a set of dedicated S4 classes.

Diff between topmodel versions 0.6.2 dated 2009-05-17 and 0.7.0 dated 2009-08-16

 DESCRIPTION           |   22 +++++++++++++---------
 NAMESPACE             |   13 +++++++++----
 R/flowlength.R        |only
 R/outlet.R            |only
 R/river.R             |only
 R/sinkfill.R          |only
 R/streamorder.R       |only
 R/subcatch.R          |only
 R/topidx.R            |   11 +++++------
 doc                   |only
 man/NSeff.Rd          |    2 +-
 man/flowlength.Rd     |only
 man/huagrahuma.Rd     |    8 ++++----
 man/huagrahuma.dem.Rd |    5 +++--
 man/infiltration.Rd   |    2 +-
 man/outlet.Rd         |only
 man/river.Rd          |only
 man/sinkfill.Rd       |only
 man/subcatch.Rd       |only
 man/topidx.Rd         |    6 +++---
 man/topmodel.Rd       |   13 ++++++-------
 src/core_topmodel.c   |   21 ++++++++++++---------
 src/flowlength.c      |only
 src/param_init.c      |   17 +++++++++++------
 src/river.c           |only
 src/sinkfill.c        |only
 src/streamorder.c     |only
 src/subcatch.c        |only
 src/topmodel.h        |    1 -
 29 files changed, 68 insertions(+), 53 deletions(-)

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Package spgrass6 updated to version 0.6-7 with previous version 0.6-6 dated 2009-05-27

Author: Roger Bivand
Title: Interface between GRASS 6 geographical information system and R
Description: Interpreted interface between GRASS 6 geographical information system and R, based on starting R from within the GRASS environment, or running free-standing R in a temporary GRASS location; the package provides facilities for using all GRASS commands from the R command line.

Diff between spgrass6 versions 0.6-6 dated 2009-05-27 and 0.6-7 dated 2009-08-16

 ChangeLog      |   13 +++++++++++--
 DESCRIPTION    |   12 +++++++-----
 R/bin_link.R   |   20 ++++++++++++++++++--
 R/vect_link.R  |   12 ++++++++++--
 inst/ChangeLog |   13 +++++++++++--
 5 files changed, 57 insertions(+), 13 deletions(-)

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Package rngwell19937 updated to version 0.5-3 with previous version 0.5-2 dated 2009-04-16

Author: Petr Savicky
Title: WELL19937a random number generator implemented with 53 bit output
Description: A stand-alone package for the random number generator WELL19937a by F. Panneton, P. L'Ecuyer and M. Matsumoto. The initialization algorithm allows to seed the generator with a vector of integers of an arbitrary length and uses MRG32k5a by P. L'Ecuyer to achieve good quality of the initialization. The output function may be set to provide numbers from the interval (0,1) with 53 (the default) or 32 random bits. WELL19937a is of similar type as Mersenne Twister and has the same period. WELL19937a is slightly slower than Mersenne Twister, but has better equidistribution and "bit-mixing" properties and faster recovery from states with prevailing zeros than Mersenne Twister. All WELL generators with orders 512, 1024, 19937 and 44497 can be found in randtoolbox package.

Diff between rngwell19937 versions 0.5-2 dated 2009-04-16 and 0.5-3 dated 2009-08-16

 CHANGELOG              |    5 ++++-
 DESCRIPTION            |   29 +++++++++++++++++------------
 R/init.R               |    4 ++--
 man/set.vector.seed.Rd |    9 +++++++--
 src/interface.c        |   22 +++++++++++-----------
 5 files changed, 41 insertions(+), 28 deletions(-)

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Package nlme updated to version 3.1-93 with previous version 3.1-92 dated 2009-05-24

Author: Jose Pinheiro , Douglas Bates , Saikat DebRoy , Deepayan Sarkar , the R Core team.
Title: Linear and Nonlinear Mixed Effects Models
Description: Fit and compare Gaussian linear and nonlinear mixed-effects models.

Diff between nlme versions 3.1-92 dated 2009-05-24 and 3.1-93 dated 2009-08-16

 ChangeLog                             |   17 ++++++++++++++++-
 DESCRIPTION                           |    8 ++++----
 R/corStruct.R                         |    2 +-
 R/gls.R                               |    7 ++++---
 R/gnls.R                              |    2 +-
 R/lmList.R                            |   11 +++++------
 inst/po/de/LC_MESSAGES/R-nlme.mo      |binary
 inst/po/en@quot/LC_MESSAGES/R-nlme.mo |binary
 inst/po/fr/LC_MESSAGES/R-nlme.mo      |binary
 po/R-de.po                            |only
 po/R-en@quot.po                       |   11 ++++-------
 po/R-fr.po                            |    9 ++-------
 po/R-nlme.pot                         |    9 +++------
 tests/anova.gls.R                     |    6 ++++++
 14 files changed, 46 insertions(+), 36 deletions(-)

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Package infotheo updated to version 1.1.0 with previous version 1.0.2 dated 2009-06-28

Author: Patrick E. Meyer
Title: Information-Theoretic Measures
Description: This package implements various measures of information theory based on several entropy estimators.

Diff between infotheo versions 1.0.2 dated 2009-06-28 and 1.1.0 dated 2009-08-16

 CHANGES                 |    5 +-
 DESCRIPTION             |   11 ++---
 R/entropy.R             |  101 +++++++++++++++++++++++-------------------------
 man/condentropy.Rd      |    8 +--
 man/condinformation.Rd  |    8 +--
 man/entropy.Rd          |    8 +--
 man/interinformation.Rd |    8 +--
 man/multiinformation.Rd |    4 -
 man/mutinformation.Rd   |    8 +--
 src/discretize.cpp      |    4 -
 10 files changed, 83 insertions(+), 82 deletions(-)

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Package gWidgetsWWW updated to version 0.0-9 with previous version 0.0-8 dated 2009-08-08

Author: John Verzani
Title: Toolkit implementation of gWidgets API for use with web pages
Description: Port of gWidgets API to www using RApache (http://biostat.mc.vanderbilt.edu/rapache/index.html) to link R with a web page and Ext JavaScript libararies to create and manipulate widgets. Needs Ext 3.0 or greater. (www.extjs.com)

Diff between gWidgetsWWW versions 0.0-8 dated 2009-08-08 and 0.0-9 dated 2009-08-16

 DESCRIPTION                    |    8 
 NEWS                           |   13 
 R/aaa.R                        |   49 +-
 R/dialogs.R                    |    8 
 R/gdf.R                        |    2 
 R/gedit.R                      |    2 
 R/ggooglemaps.R                |    4 
 R/gradio.R                     |   12 
 R/gslider.R                    |    2 
 R/gtext.R                      |    2 
 R/gwindow.R                    |   21 -
 inst/Examples/ex-windows.R     |    4 
 inst/doc/gWidgetsWWW.Rnw       |   36 +
 inst/doc/gWidgetsWWW.pdf       |  739 ++++++++++++++++++++---------------------
 inst/scripts/gWidgetsWWWAJAX.R |   17 
 inst/scripts/gWidgetsWWWrun.R  |    2 
 man/gWidgetsWWW-package.Rd     |   13 
 17 files changed, 488 insertions(+), 446 deletions(-)

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