Author: Stef van Buuren
Diff between mice versions 1.21 dated 2009-03-17 and 2.0 dated 2009-08-27
Title: Multivariate Imputation by Chained Equations
Description: Multiple Imputation using Fully Conditional Specification
mice-1.21/mice/inst/COPYING |only
mice-1.21/mice/inst/ChangeLog |only
mice-1.21/mice/inst/doc/Manual.pdf |only
mice-1.21/mice/inst/doc/Manual.sxw |only
mice-1.21/mice/man/mice.impute.logreg2.Rd |only
mice-1.21/mice/man/mice.impute.norm.improper.Rd |only
mice-2.0/mice/DESCRIPTION | 21
mice-2.0/mice/NAMESPACE |only
mice-2.0/mice/R/mice.R | 1595 +++++++++++++++++-------
mice-2.0/mice/R/zzz.R |only
mice-2.0/mice/data/boys.rda |only
mice-2.0/mice/data/popmis.rda |only
mice-2.0/mice/data/windspeed.rda |only
mice-2.0/mice/inst/CITATION |only
mice-2.0/mice/inst/NEWS |only
mice-2.0/mice/inst/doc/JSScode.r |only
mice-2.0/mice/man/boys.rd |only
mice-2.0/mice/man/cbind.mids.rd |only
mice-2.0/mice/man/complete.Rd | 46
mice-2.0/mice/man/glm.mids.Rd | 9
mice-2.0/mice/man/ibind.rd |only
mice-2.0/mice/man/lm.mids.Rd | 17
mice-2.0/mice/man/md.pairs.Rd |only
mice-2.0/mice/man/md.pattern.Rd | 9
mice-2.0/mice/man/mice-internal.Rd | 25
mice-2.0/mice/man/mice.Rd | 149 +-
mice-2.0/mice/man/mice.impute.2l.norm.rd |only
mice-2.0/mice/man/mice.impute.lda.Rd | 32
mice-2.0/mice/man/mice.impute.logreg.Rd | 30
mice-2.0/mice/man/mice.impute.mean.Rd | 22
mice-2.0/mice/man/mice.impute.norm.Rd | 30
mice-2.0/mice/man/mice.impute.norm.nob.rd |only
mice-2.0/mice/man/mice.impute.passive.Rd | 28
mice-2.0/mice/man/mice.impute.pmm.Rd | 55
mice-2.0/mice/man/mice.impute.polyreg.Rd | 20
mice-2.0/mice/man/mice.impute.sample.Rd | 24
mice-2.0/mice/man/mice.mids.Rd | 22
mice-2.0/mice/man/mids.Rd | 23
mice-2.0/mice/man/mipo.Rd | 17
mice-2.0/mice/man/mira.Rd | 15
mice-2.0/mice/man/nhanes.Rd | 4
mice-2.0/mice/man/nhanes2.Rd | 4
mice-2.0/mice/man/pool.Rd | 101 +
mice-2.0/mice/man/pool.compare.rd |only
mice-2.0/mice/man/pool.r.squared.Rd |only
mice-2.0/mice/man/pool.scalar.rd |only
mice-2.0/mice/man/popmis.rd |only
mice-2.0/mice/man/quickpred.Rd |only
mice-2.0/mice/man/rbind.mids.rd |only
mice-2.0/mice/man/windspeed.rd |only
mice-2.0/mice/man/with.mids.Rd |only
51 files changed, 1562 insertions(+), 736 deletions(-)
Author: Justin Donaldson
Title: A simple toolbar GUI for brushing RGL plots
Description: sculpt3d is a GTK+ toolbar that allows for more
interactive control of a dataset inside the RGL plot window.
Controls for simple brushing, highlighting, labeling, and
mouseMode changes are provided by point-and-click rather than
through the R terminal interface.
Diff between sculpt3d versions 0.2 dated 2009-07-31 and 0.2-1 dated 2009-08-27
DESCRIPTION | 8 ++++---- NEWS | 5 ++++- R/sculpt3d-internal.R | 7 +++++-- R/sculpt3d.R | 16 +++++++++++----- man/sculpt3d-package.Rd | 15 ++++----------- man/sculpt3d.Rd | 10 +++++++--- man/sculpt3d.setCallback.Rd | 5 +++-- 7 files changed, 38 insertions(+), 28 deletions(-)
Author: Pierre Chausse
Diff between gmm versions 1.0-7 dated 2009-07-02 and 1.1-0 dated 2009-08-27
Title: Generalized Method of Moments and Generalized Empirical
Likelihood
Description: It is a complete suite to estimate models based on moment
conditions. It includes the two step Generalized method of
moments (GMM) of Hansen(1982), the iterated GMM and continuous
updated estimator (CUE) of Hansen-Eaton-Yaron(1996) and several
methods that belong to the Generalized Empirical Likelihood
(GEL) family of estimators, as presented by Smith(1997),
Kitamura(1997), Newey-Smith(2004) and Anatolyev(2005).
gmm-1.0-7/gmm/man/lintest.Rd |only
gmm-1.1-0/gmm/DESCRIPTION | 11
gmm-1.1-0/gmm/NAMESPACE | 24
gmm-1.1-0/gmm/NEWS | 21
gmm-1.1-0/gmm/R/gel.R | 116
gmm-1.1-0/gmm/R/gel_tools.R | 158
gmm-1.1-0/gmm/R/gmm.R | 143
gmm-1.1-0/gmm/R/gmm_tools.R | 204
gmm-1.1-0/gmm/R/plot.gmm.R |only
gmm-1.1-0/gmm/inst/doc/empir.bib | 60
gmm-1.1-0/gmm/inst/doc/gmm_with_R.pdf |11463 ++++++++++++++++++++++++++-------
gmm-1.1-0/gmm/inst/doc/gmm_with_R.rnw | 758 +-
gmm-1.1-0/gmm/man/charStable.Rd |only
gmm-1.1-0/gmm/man/coef.gel.Rd |only
gmm-1.1-0/gmm/man/coef.gmm.Rd |only
gmm-1.1-0/gmm/man/confint.gel.Rd |only
gmm-1.1-0/gmm/man/confint.gmm.Rd |only
gmm-1.1-0/gmm/man/fitted.gel.Rd |only
gmm-1.1-0/gmm/man/fitted.gmm.Rd |only
gmm-1.1-0/gmm/man/formula.gel.Rd |only
gmm-1.1-0/gmm/man/formula.gmm.Rd |only
gmm-1.1-0/gmm/man/gel.Rd | 47
gmm-1.1-0/gmm/man/get_dat.Rd | 5
gmm-1.1-0/gmm/man/get_lamb.Rd | 3
gmm-1.1-0/gmm/man/gmm.Rd | 51
gmm-1.1-0/gmm/man/plot.gel.Rd |only
gmm-1.1-0/gmm/man/plot.gmm.Rd |only
gmm-1.1-0/gmm/man/print.gel.Rd |only
gmm-1.1-0/gmm/man/print.gmm.Rd |only
gmm-1.1-0/gmm/man/print.summary.gel.Rd |only
gmm-1.1-0/gmm/man/print.summary.gmm.Rd |only
gmm-1.1-0/gmm/man/residuals.gel.Rd |only
gmm-1.1-0/gmm/man/residuals.gmm.Rd |only
gmm-1.1-0/gmm/man/summary.gel.Rd | 12
gmm-1.1-0/gmm/man/summary.gmm.Rd | 12
gmm-1.1-0/gmm/man/vcov.gel.Rd |only
gmm-1.1-0/gmm/man/vcov.gmm.Rd |only
gmm-1.1-0/gmm/man/weightsAndrews2.Rd | 2
38 files changed, 10158 insertions(+), 2932 deletions(-)
Author: Brandon Whitcher
Diff between dcemri versions 0.10 dated 2009-08-13 and 0.1.4 dated 2009-08-27
Title: A Package for Medical Image Analysis
Description: A collection of routines and documentation that allows one
to perform a quantitative analysis of dynamic contrast-enhanced
or diffusion-weighted MRI data. Medical imaging data should be
organized using either the Analyze or NIfTI data formats.
DESCRIPTION | 12 -
R/aif.R | 2
R/dcemri_bayes.R | 123 +++++++++-------
R/dcemri_lm.R | 2
R/dcemri_map.R |only
R/dcemri_spline.R | 76 ++++++----
R/firstlib.R | 9 +
R/flipangle.R | 2
R/hotmetal.R | 1
R/kineticmodel.R | 2
R/read.R | 272 ++++++++++++-------------------------
R/tim_colors.R | 1
R/zzz.R |only
inst/doc/dcemri.Rnw | 85 +++++++----
inst/doc/dcemri.pdf |binary
man/aif.Rd | 2
man/buckley.Rd | 2
man/conv_fft.Rd | 2
man/dam.Rd | 2
man/dce_bayes.Rd | 16 +-
man/dce_map.Rd |only
man/dce_spline.Rd | 12 -
man/dcemri-package.Rd |only
man/dcemri.Rd | 6
man/extract.Rd | 2
man/flipangle.Rd | 2
man/ftm.Rd | 2
man/hotmetal.Rd | 2
man/kineticmodel.Rd | 2
man/miscellaneous.Rd | 2
man/read.Rd | 12 +
man/read_analyze.Rd | 2
man/read_nifti.Rd | 8 -
man/shift3D.Rd | 2
man/tim_colors.Rd | 2
man/write.Rd | 6
src/baymri.c | 12 -
tests/Examples/dcemri-Ex.Rout.save | 146 ++++++++++++-------
38 files changed, 433 insertions(+), 398 deletions(-)
Author: Federico Girosi
Diff between YourCast versions 0.9-7 dated 2009-01-16 and 1.1-1 dated 2009-08-27
Title: YourCast
Description: YourCast makes time series cross-sectional forecasts with
multiple cross-sections based on your assumptions. It allows a
variety of smoothing assumptions based on similarities among
the levels, trends, or interactions in the expected value of
the dependent variable rather than the coefficients. YourCast
implements ideas in the book Federico Girosi and Gary King.
DEMOGRAPHIC FORECASTING. Princeton University Press, 2008; see
http://gking.harvard.edu/files/smooth/
YourCast-0.9-7/YourCast/inst/doc/yourcast.idx |only
YourCast-1.1-1/YourCast/DESCRIPTION | 33
YourCast-1.1-1/YourCast/LICENSE |only
YourCast-1.1-1/YourCast/NAMESPACE | 2
YourCast-1.1-1/YourCast/R/fede.funcs.R | 2
YourCast-1.1-1/YourCast/R/lag.gen.R |only
YourCast-1.1-1/YourCast/R/plot.yourcast.R | 11
YourCast-1.1-1/YourCast/R/std.MAP.R | 10
YourCast-1.1-1/YourCast/R/yourcast.R | 7
YourCast-1.1-1/YourCast/R/yourprep.R | 132 -
YourCast-1.1-1/YourCast/inst/doc/copyRd.Rout | 6
YourCast-1.1-1/YourCast/inst/doc/index.shtml | 16
YourCast-1.1-1/YourCast/inst/doc/yourcast.Rnw | 8
YourCast-1.1-1/YourCast/inst/doc/yourcast.pdf | 2706 ++++++++++++--------------
YourCast-1.1-1/YourCast/man/yourprep.Rd | 56
15 files changed, 1499 insertions(+), 1490 deletions(-)
Author: Jouni Lehtonen
Diff between KFAS versions 0.3.2 dated 2009-08-21 and 0.3.3 dated 2009-08-27
Title: Multivariate Kalman filter and smoother, simulation smoother and
forecasting
Description: Fast multivariate Kalman filter, smoother, simulation
smoother and forecasting. Uses exact diffuse initialisation
when distributions of some or all elements of initial state
vector are unknown.
DESCRIPTION | 8 ++++----
R/KFAS.R | 18 ++++++++++++------
man/simsmoother.Rd | 8 ++------
src/simsmoother.f90 | 49 ++++++++++++++++++++++++++++++++++---------------
4 files changed, 52 insertions(+), 31 deletions(-)