Author: Vinzenz Erhardt
Title: Generate correlated count random variables
Description: Generate high-dimensional correlated count random
variables with a prespecified Pearson correlation.
Diff between corcounts versions 1.2 dated 2008-11-27 and 1.3 dated 2009-10-09
DESCRIPTION | 11 +++++++---- R/modified.cvine.alg.R | 4 ++-- R/modified.cvine.alg.reg.R | 4 ++-- man/corcounts-package.Rd | 9 ++++----- man/rcounts.Rd | 19 +++++++++++++------ man/rcounts.reg.Rd | 7 +++++-- 6 files changed, 33 insertions(+), 21 deletions(-)
Author: Madeleine Cule, Robert Gramacy, Richard Samworth
Title: Log-concave Density Estimation in Arbitrary Dimensions
Description: Computes a log-concave (maximum likelihood) estimator for
i.i.d. data in any number of dimensions.
Diff between LogConcDEAD versions 1.3-3 dated 2009-01-30 and 1.4-0 dated 2009-10-09
ChangeLog | 10 DESCRIPTION | 15 R/convhullnew.R | 3 R/dlcd.R | 43 R/getinfolcd.R |only R/interplcd.R | 24 R/interpmarglcd.R | 42 R/mlelcd.R | 145 R/plot.LogConcDEAD.R | 52 R/print.LogConcDEAD.R | 49 R/rlcd.R | 82 R/summary.LogConcDEAD.R | 51 R/usefulfuncs.R |only inst/doc/.build.timestamp |only inst/doc/LogConcDEAD.Rnw | 15 inst/doc/LogConcDEAD.pdf | 9692 ++++++++++++++++++++++---------------------- inst/doc/intro.intRnw | 9 man/LogConcDEAD-internal.Rd | 10 man/LogConcDEAD-package.Rd | 6 man/dlcd.Rd | 7 man/getinfolcd.Rd |only man/interplcd.Rd | 36 man/mlelcd.Rd | 11 man/plot.LogConcDEAD.Rd | 16 src/convhullnew.c | 5 src/convhullnmlc.c | 12 src/delaunayn.c | 2 src/logcon.h |only src/logconweights.c | 24 src/renormalise.c | 6 src/sigmaeffw.c | 128 src/subgradeffw.c | 78 src/useful.c | 22 33 files changed, 5345 insertions(+), 5250 deletions(-)
Author: Charles J. Geyer
Diff between mcmc versions 0.7-2 dated 2009-09-22 and 0.7-3 dated 2009-10-09
Title: Markov Chain Monte Carlo
Description: functions for Markov chain Monte Carlo (MCMC).
ChangeLog | 5 ++++
DESCRIPTION | 8 +++----
R/metrop.R | 1
inst/doc/Makefile | 5 +++-
inst/doc/debug.Rnw |only
inst/doc/debug.pdf |only
inst/doc/debug.tex |only
inst/doc/demo.pdf |binary
inst/doc/demo.tex | 16 +++++++-------
man/initseq.Rd | 5 ++++
man/metrop.Rd | 7 +++++-
man/temper.Rd | 52 +++++++++++++++++++++++++++++++++++------------
src/metrop.c | 34 +++++++++++++++++++++---------
src/temper.c | 2 -
tests/logitmat.R | 10 +++++++--
tests/logitmat.Rout.save | 25 +++++++++++++++++-----
16 files changed, 124 insertions(+), 46 deletions(-)
Author: John Fox
Diff between effects versions 2.0-7 dated 2009-05-10 and 2.0-8 dated 2009-10-09
Title: Effect Displays for Linear, Generalized Linear,
Multinomial-Logit, and Proportional-Odds Logit Models
Description: Graphical and tabular effect displays, e.g., of
interactions, for linear generalized linear, multinomial-logit,
and proportional-odds logit models.
DESCRIPTION | 10 +++++-----
NAMESPACE | 3 ++-
inst/CHANGES | 10 ++++++++++
inst/CITATION.txt |only
man/effect.Rd | 16 +++++++++++-----
man/effects-package.Rd | 5 ++---
man/summary.effect.Rd | 14 +++++++-------
7 files changed, 37 insertions(+), 21 deletions(-)
Author: Stephen Milborrow derived from mda:mars by Trevor Hastie and
Rob Tibshirani.
Title: Multivariate Adaptive Regression Spline Models
Description: Build regression models using the techniques in Friedman's
papers "Fast MARS" and "Multivariate Adaptive Regression
Splines". (The term "MARS" is copyrighted and thus not used in
the name of the package.)
Diff between earth versions 2.3-4 dated 2009-09-21 and 2.3-5 dated 2009-10-09
DESCRIPTION | 6 NEWS | 4 R/earth.glm.R | 7 man/earth.Rd | 4 src/allowed.c | 6 src/tests/test.earth.full.Rout.save | 1036 +++++++++++------------ src/tests/test.earth.glm.R | 23 src/tests/test.earth.glm.Rout.save | 1003 +++++++++++++++-------- src/tests/test.plotmo.Rout.save | 1556 ++++++++++++++++++------------------ 9 files changed, 2011 insertions(+), 1634 deletions(-)
Author: Michael Anderson
Title: Bayesian Discrete Ordered Classification of DNA Barcodes
Description: This package contains a function that will classify DNA
barcodes as well as a few test and reference data sets.
Diff between bdoc versions 1.0 dated 2009-09-22 and 1.1 dated 2009-10-09
DESCRIPTION | 6 +++--- R/bdoc.R | 12 ++++++------ man/bdoc-package.Rd | 2 +- 3 files changed, 10 insertions(+), 10 deletions(-)
Author: Cathy W. S. Chen, Edward M.H. Lin, F.C. Liu, and Richard
Gerlach
Title: On Bayesian analysis of Threshold autoregressive model (BAYSTAR)
Description: The manuscript introduces the BAYSTAR package, which
provides the functionality for Bayesian estimation in
autoregressive threshold models.
Diff between BAYSTAR versions 0.2-2 dated 2009-09-24 and 0.2-3 dated 2009-10-09
CHANGELOG | 5 +++++ DESCRIPTION | 8 ++++---- R/BAYSTAR.R | 27 +++++++++++++-------------- man/BAYSTAR.Rd | 38 ++++++++++++++++++++++++++------------ 4 files changed, 48 insertions(+), 30 deletions(-)