Author: Arne Henningsen
Diff between sampleSelection versions 0.6-6 dated 2009-07-18 and 0.6-8 dated 2009-10-16
More information about sampleSelection at CRAN
Title: Sample Selection Models
Description: Estimation of Sample Selection Models
sampleSelection-0.6-6/sampleSelection/R/coef.probit.R |only
sampleSelection-0.6-6/sampleSelection/R/coef.summary.probit.R |only
sampleSelection-0.6-6/sampleSelection/R/vcov.probit.R |only
sampleSelection-0.6-6/sampleSelection/man/coef.probit.Rd |only
sampleSelection-0.6-6/sampleSelection/man/vcov.probit.Rd |only
sampleSelection-0.6-8/sampleSelection/DESCRIPTION | 8
sampleSelection-0.6-8/sampleSelection/INDEX | 2
sampleSelection-0.6-8/sampleSelection/R/print.summary.probit.R | 2
sampleSelection-0.6-8/sampleSelection/inst/doc/selection.pdf | 947 ++++------
sampleSelection-0.6-8/sampleSelection/man/vcov.selection.Rd | 2
sampleSelection-0.6-8/sampleSelection/tests/selection.Rout.save | 88
11 files changed, 467 insertions(+), 582 deletions(-)
Permanent link
Author: Fortran original by Leo Breiman and Adele Cutler, R port by
Andy Liaw and Matthew Wiener.
Title: Breiman and Cutler's random forests for classification and
regression
Description: Classification and regression based on a forest of trees
using random inputs.
Diff between randomForest versions 4.5-31 dated 2009-10-15 and 4.5-32 dated 2009-10-16
DESCRIPTION | 8 ++++---- R/predict.randomForest.R | 2 +- inst/NEWS | 5 +++++ man/predict.randomForest.Rd | 14 ++++++++++---- 4 files changed, 20 insertions(+), 9 deletions(-)
Author: Joerg Schaber
Title: Auxiliary functions for phenological data analysis
Description: Provides some easy-to-use functions for time series
analyses of (plant-) phenological data sets. These functions
mainly deal with the estimation of combined phenological time
series and are usually wrappers for functions that are already
implemented in other R packages adapted to the special
structure of phenological data and the needs of phenologists.
Some date conversion functions to handle Julian dates are also
provided.
Diff between pheno versions 1.4 dated 2009-01-18 and 1.5 dated 2009-10-16
DESCRIPTION | 36 ++++++++------- R/date2jul1.R | 4 - R/date2jul2.R | 4 - R/daylength.R | 3 - R/daysbetween.R | 4 - R/getConnectedSets.R |only R/jul2date1.R | 4 - R/jul2date2.R | 4 - R/maxConnectedSet.R | 12 +++-- R/maxdaylength.R | 3 - R/pheno.ddm.R | 72 +++++++++++++++++------------- R/pheno.flm.fit.R | 112 ++++++++++++++++++++++++++++++------------------ R/pheno.lad.fit.R | 63 ++++++++++++++------------- R/pheno.mlm.fit.R | 4 - R/zzz.R | 2 man/connectedSets.Rd | 5 +- man/getConnectedSets.Rd |only man/maxConnectedSet.Rd | 1 man/pheno.ddm.Rd | 10 ++-- man/pheno.flm.fit.Rd | 18 +++++-- man/pheno.lad.fit.Rd | 14 +++--- man/pheno.mlm.fit.Rd | 3 + src/pheno.c | 50 +++++++++++++++------ 23 files changed, 255 insertions(+), 173 deletions(-)
Author: Ott Toomet
Diff between maxLik versions 0.5-12 dated 2009-07-18 and 0.6-0 dated 2009-10-16
Title: Maximum Likelihood Estimation
Description: Tools for Maximum Likelihood Estimation
DESCRIPTION | 8 -
INDEX | 2
NAMESPACE | 4
NEWS |only
R/checkFuncArgs.R |only
R/coef.maxLik.R | 9 +
R/maxBFGS.R | 172 +++++++++++++++++++---
R/maxBHHH.R | 87 +++++++----
R/maxLik.R | 66 +++++---
R/maxNM.R | 146 ++++++++++++++++--
R/maxNR.R | 326 ++++++------------------------------------
R/maxNRCompute.R |only
R/maxSANN.R | 118 +++++++++++++--
R/maximMessage.R |only
R/numericGradient.R | 18 +-
R/numericHessian.R | 18 +-
R/stdEr.R |only
R/summary.maxLik.R | 41 ++---
R/summary.maxim.R | 10 +
R/sumt.R |only
R/vcov.maxLik.R | 11 +
man/hessian.Rd | 6
man/maxBFGS.Rd | 46 +++++
man/maxLik-internal.Rd | 4
man/maxLik-methods.Rd | 1
man/maxLik.Rd | 21 ++
man/maxNR.Rd | 62 ++++++-
man/numericGradient.Rd | 10 -
man/stdEr.Rd |only
man/summary.maxLik.Rd | 12 +
man/summary.maxim.Rd | 8 -
man/sumt.Rd |only
man/vcov.maxLik.Rd | 6
tests/constraints.R |only
tests/constraints.Rout.save |only
tests/examples.R | 11 -
tests/examples.Rout.save | 123 ++++++++-------
tests/fitNormalDist.R |only
tests/fitNormalDist.Rout.save |only
tests/methods.R |only
tests/methods.Rout.save |only
41 files changed, 828 insertions(+), 518 deletions(-)
Author: Robin K. S. Hankin
Title: create and investigate magic squares
Description: a collection of efficient, vectorized algorithms for the
creation and investigation of magic squares and hypercubes,
including a variety of functions for the manipulation and
analysis of arbitrarily dimensioned arrays. The package
includes methods for creating normal magic squares of any order
greater than 2. The ultimate intention is for the package to
be a computerized embodiment all magic square knowledge,
including direct numerical verification of properties of magic
squares (such as recent results on the determinant of
odd-ordered semimagic squares). Some antimagic functionality
is included. The package also serves as a rebuttal to the
often-heard comment "I thought R was just for statistics".
Diff between magic versions 1.4-4 dated 2009-03-30 and 1.4-6 dated 2009-10-16
DESCRIPTION | 6 - R/magic.R | 193 +++++++++++++++++++++++++------------------ inst/doc/magicpaper.pdf | 26 ++--- man/adiag.Rd | 5 - man/allsums.Rd | 31 ++++-- man/apl.Rd | 4 man/fnsd.Rd | 5 - man/hudson.Rd | 15 +-- man/is.magic.Rd | 26 ++--- man/is.magichypercube.Rd | 32 +++---- man/is.square.palindromic.Rd | 23 ++--- man/latin.Rd | 4 man/magic.2np1.Rd | 4 man/magic.constant.Rd | 2 man/recurse.Rd | 18 +++- man/strachey.Rd | 7 - man/subsums.Rd | 10 +- tests/aaa.R | 61 +++++++++++-- 18 files changed, 285 insertions(+), 187 deletions(-)
Author: Tarn Duong
Diff between ks versions 1.6.7 dated 2009-10-05 and 1.6.8 dated 2009-10-16
Title: Kernel smoothing
Description: Kernel density estimators and kernel discriminant analysis
for multivariate data
DESCRIPTION | 8 ++++----
NAMESPACE | 2 +-
R/selector.R | 46 +++++++++++++++++++++++++++-------------------
README | 42 ++++++++++++++++++++++--------------------
inst/doc/kde.pdf |binary
man/Hlscv.Rd | 21 ++++++++++-----------
6 files changed, 64 insertions(+), 55 deletions(-)
Author: Virasakdi Chongsuvivatwong
Diff between epicalc versions 2.9.2.7 dated 2009-10-11 and 2.9.2.8 dated 2009-10-16
Title: Epidemiological calculator
Description: Functions making R easy for epidemiological calculation.
DESCRIPTION | 8 ++--
R/epicalc.R | 80 ++++++++++++++++++++++++++++-------------------
man/addMissingRecords.rd | 24 +++++++++++---
3 files changed, 72 insertions(+), 40 deletions(-)
Author: Göran Broström
Title: Event History Analysis
Description: A package for survival and event history analysis
Diff between eha versions 1.2-4 dated 2009-01-13 and 1.2-12 dated 2009-10-16
eha-1.2-12/eha/ChangeLog | 20 + eha-1.2-12/eha/DESCRIPTION | 8 eha-1.2-12/eha/R/aftreg.R | 28 + eha-1.2-12/eha/R/aftreg.fit.R | 177 ++++++----- eha-1.2-12/eha/R/check.dist.R | 7 eha-1.2-12/eha/R/coxreg.R | 24 + eha-1.2-12/eha/R/coxreg.fit.R | 41 ++ eha-1.2-12/eha/R/mlreg.R | 2 eha-1.2-12/eha/R/phreg.R | 4 eha-1.2-12/eha/R/print.coxreg.R | 3 eha-1.2-12/eha/man/aftreg.Rd | 5 eha-1.2-12/eha/man/aftreg.fit.Rd | 3 eha-1.2-12/eha/man/coxreg.Rd | 4 eha-1.2-12/eha/man/coxreg.fit.Rd | 5 eha-1.2-12/eha/man/phreg.Rd | 6 eha-1.2-12/eha/man/plot.coxreg.Rd | 2 eha-1.2-12/eha/man/plot.hazdata.Rd | 2 eha-1.2-12/eha/man/weibreg.Rd | 2 eha-1.2-12/eha/src/aftexpreg.c | 476 +++++-------------------------- eha-1.2-12/eha/src/aftreg.c | 566 ++++++++----------------------------- eha-1.2-12/eha/src/aftreg.h | 33 -- eha-1.2-12/eha/src/coxfun.c | 155 +++++++--- eha-1.2-12/eha/src/sup.c | 66 +++- eha-1.2-12/eha/src/sup.h | 10 eha-1.2-4/eha/src/loglik_aft.c |only eha-1.2-4/eha/src/loglik_aft.h |only 26 files changed, 627 insertions(+), 1022 deletions(-)
Author: Karline Soetaert
Diff between deSolve versions 1.3 dated 2009-06-25 and 1.5 dated 2009-10-16
Title: General solvers for initial value problems of ordinary
differential equations (ODE), partial differential equations
(PDE) and differential algebraic equations (DAE)
Description: Functions that solve initial value problems of a system of
first-order ordinary differential equations (ODE), of partial
differential equations (PDE) and of differential algebraic
equations (DAE). The functions provide an interface to the
FORTRAN functions lsoda, lsodar, lsode, lsodes of the ODEPACK
collection, to the FORTRAN functions dvode and daspk and a
C-implementation of solvers of the Runge-Kutta family with
fixed or variable time steps. The package contains routines
designed for solving ODEs resulting from 1-D, 2-D and 3-D
partial differential equations (PDE) that have been converted
to ODEs by numerical differencing.
deSolve-1.3/deSolve/demo/nonlinreg.R |only
deSolve-1.3/deSolve/inst/dynload/daspkdll.r |only
deSolve-1.3/deSolve/inst/dynload/lsodardll.r |only
deSolve-1.3/deSolve/inst/dynload/odedll.r |only
deSolve-1.3/deSolve/inst/dynload/satres.c |only
deSolve-1.3/deSolve/inst/dynload/satres.r |only
deSolve-1.3/deSolve/inst/wishlist.txt |only
deSolve-1.3/deSolve/src/Aquaphy.f |only
deSolve-1.3/deSolve/src/CCL4model.f |only
deSolve-1.3/deSolve/src/call_dvode.c |only
deSolve-1.5/deSolve/DESCRIPTION | 12
deSolve-1.5/deSolve/NAMESPACE | 7
deSolve-1.5/deSolve/R/Aquaphy.R | 37
deSolve-1.5/deSolve/R/DLLfunc.R |only
deSolve-1.5/deSolve/R/SCOC.R |only
deSolve-1.5/deSolve/R/Utilities.R |only
deSolve-1.5/deSolve/R/ccl4model.R | 28
deSolve-1.5/deSolve/R/daspk.R | 826 -
deSolve-1.5/deSolve/R/diagnostics.R | 310
deSolve-1.5/deSolve/R/euler.R | 104
deSolve-1.5/deSolve/R/forcings.R |only
deSolve-1.5/deSolve/R/functions.R |only
deSolve-1.5/deSolve/R/lsoda.R | 219
deSolve-1.5/deSolve/R/lsodar.R | 202
deSolve-1.5/deSolve/R/lsode.R | 242
deSolve-1.5/deSolve/R/lsodes.R | 252
deSolve-1.5/deSolve/R/ode.R | 417
deSolve-1.5/deSolve/R/printmessage.R | 38
deSolve-1.5/deSolve/R/rk.R | 150
deSolve-1.5/deSolve/R/rk4.R | 113
deSolve-1.5/deSolve/R/rkMethod.R | 382
deSolve-1.5/deSolve/R/vode.R | 608 -
deSolve-1.5/deSolve/R/zvode.R |only
deSolve-1.5/deSolve/demo/00Index | 7
deSolve-1.5/deSolve/demo/CCL4model.R | 127
deSolve-1.5/deSolve/demo/odedim.R | 367
deSolve-1.5/deSolve/demo/rk_solvers.R | 253
deSolve-1.5/deSolve/inst/doc/compiledCode.Rnw | 1916 ++--
deSolve-1.5/deSolve/inst/doc/compiledCode.pdf | 9438 ++++++++++++++++++---
deSolve-1.5/deSolve/inst/doc/deSolve.Rnw | 1616 +--
deSolve-1.5/deSolve/inst/doc/deSolve.pdf | 3384 ++++---
deSolve-1.5/deSolve/inst/doc/index.html | 29
deSolve-1.5/deSolve/inst/doc/integration.bib | 148
deSolve-1.5/deSolve/inst/doc/mymod.c | 82
deSolve-1.5/deSolve/inst/doc/mymod.f | 86
deSolve-1.5/deSolve/inst/dynload/Aquaphy.f | 258
deSolve-1.5/deSolve/inst/dynload/AquaphyForcing.R |only
deSolve-1.5/deSolve/inst/dynload/AquaphyForcing.f |only
deSolve-1.5/deSolve/inst/dynload/ChemicalDAE.f |only
deSolve-1.5/deSolve/inst/dynload/Forcing_lv.R |only
deSolve-1.5/deSolve/inst/dynload/Forcing_lv.c |only
deSolve-1.5/deSolve/inst/dynload/SCOC.f |only
deSolve-1.5/deSolve/inst/dynload/daspkdll.R |only
deSolve-1.5/deSolve/inst/dynload/daspkfor.f | 148
deSolve-1.5/deSolve/inst/dynload/intakes.RData |only
deSolve-1.5/deSolve/inst/dynload/lsodardll.R |only
deSolve-1.5/deSolve/inst/dynload/lsodarfor.f | 110
deSolve-1.5/deSolve/inst/dynload/odedll.R |only
deSolve-1.5/deSolve/inst/dynload/odefor.f | 102
deSolve-1.5/deSolve/inst/dynload/odefor2.f | 92
deSolve-1.5/deSolve/inst/dynload/satres.R |only
deSolve-1.5/deSolve/inst/dynload/satres.f | 91
deSolve-1.5/deSolve/inst/dynload/satresC.c |only
deSolve-1.5/deSolve/inst/dynload/zvodedll.R |only
deSolve-1.5/deSolve/inst/dynload/zvodedll.f |only
deSolve-1.5/deSolve/inst/examples/Nand.R | 665 -
deSolve-1.5/deSolve/inst/examples/Pollution.R | 472 -
deSolve-1.5/deSolve/inst/examples/Schelde_DSA.R | 327
deSolve-1.5/deSolve/inst/examples/Schelde_FKA.R | 383
deSolve-1.5/deSolve/inst/examples/Schelde_FNA.R | 337
deSolve-1.5/deSolve/inst/examples/Schelde_OSA.R | 325
deSolve-1.5/deSolve/inst/examples/Schelde_pars.R | 255
deSolve-1.5/deSolve/inst/examples/examples_paper.R | 581 -
deSolve-1.5/deSolve/inst/source/vodecomments.txt | 2042 ++--
deSolve-1.5/deSolve/man/DLLfunc.Rd |only
deSolve-1.5/deSolve/man/DLLres.Rd |only
deSolve-1.5/deSolve/man/SCOC.Rd |only
deSolve-1.5/deSolve/man/aquaphy.Rd | 106
deSolve-1.5/deSolve/man/ccl4model.Rd | 2
deSolve-1.5/deSolve/man/daspk.Rd | 234
deSolve-1.5/deSolve/man/deSolve.Rd | 238
deSolve-1.5/deSolve/man/diagnostics.Rd | 93
deSolve-1.5/deSolve/man/forcings.Rd |only
deSolve-1.5/deSolve/man/lsoda.Rd | 169
deSolve-1.5/deSolve/man/lsodar.Rd | 167
deSolve-1.5/deSolve/man/lsode.Rd | 179
deSolve-1.5/deSolve/man/lsodes.Rd | 177
deSolve-1.5/deSolve/man/ode.1D.Rd | 14
deSolve-1.5/deSolve/man/ode.2D.Rd | 14
deSolve-1.5/deSolve/man/ode.3D.Rd | 10
deSolve-1.5/deSolve/man/ode.Rd | 91
deSolve-1.5/deSolve/man/ode.band.Rd | 16
deSolve-1.5/deSolve/man/plot.deSolve.Rd |only
deSolve-1.5/deSolve/man/rk.Rd | 681 -
deSolve-1.5/deSolve/man/rk4.Rd | 51
deSolve-1.5/deSolve/man/rkMethod.Rd | 456 -
deSolve-1.5/deSolve/man/vode.Rd | 222
deSolve-1.5/deSolve/man/zvode.Rd |only
deSolve-1.5/deSolve/src/DLLutil.c |only
deSolve-1.5/deSolve/src/call_daspk.c | 95
deSolve-1.5/deSolve/src/call_euler.c | 13
deSolve-1.5/deSolve/src/call_lsoda.c | 380
deSolve-1.5/deSolve/src/call_rk4.c | 15
deSolve-1.5/deSolve/src/call_rkAuto.c | 59
deSolve-1.5/deSolve/src/call_rkFixed.c | 78
deSolve-1.5/deSolve/src/call_zvode.c |only
deSolve-1.5/deSolve/src/deSolve.h | 56
deSolve-1.5/deSolve/src/deSolve_utils.c | 218
deSolve-1.5/deSolve/src/ex_Aquaphy.f |only
deSolve-1.5/deSolve/src/ex_CCL4model.f |only
deSolve-1.5/deSolve/src/ex_ChemicalDAE.c |only
deSolve-1.5/deSolve/src/ex_SCOC.f |only
deSolve-1.5/deSolve/src/forcings.c |only
deSolve-1.5/deSolve/src/opkda1.f | 6
deSolve-1.5/deSolve/src/rk_util.c | 58
deSolve-1.5/deSolve/src/rk_util.h | 11
deSolve-1.5/deSolve/src/zvode.f |only
deSolve-1.5/deSolve/src/zvode.h |only
118 files changed, 19744 insertions(+), 11753 deletions(-)
Author: Robin K. S. Hankin
Title: Continued fractions
Description: Various utilities for evaluating continued fractions
Diff between contfrac versions 1.1-7 dated 2009-02-15 and 1.1-8 dated 2009-10-16
DESCRIPTION | 8 +++++--- man/contfrac-package.Rd | 2 +- 2 files changed, 6 insertions(+), 4 deletions(-)
Author: Robin K. S. Hankin
Title: Bayesian prediction of complex computer codes
Description: Performs Bayesian prediction of complex computer codes
when fast approximations are available: M. C. Kennedy and A.
O'Hagan 2000, Biometrika 87(1):1-13
Diff between approximator versions 1.1-5 dated 2009-07-18 and 1.1-6 dated 2009-10-16
DESCRIPTION | 8 ++++---- inst/doc/apprex.pdf | 6 +++--- man/A.Rd | 2 +- man/approximator.package.Rd | 6 +++--- man/c.fun.Rd | 4 ++-- man/genie.Rd | 4 ++-- man/mdash.fun.Rd | 2 +- man/object.Rd | 8 ++++---- man/toyapps.Rd | 4 ++-- 9 files changed, 22 insertions(+), 22 deletions(-)
Author: Mathieu Ribatet
Diff between SpatialExtremes versions 1.3-0 dated 2009-05-28 and 1.4-0 dated 2009-10-16
More information about SpatialExtremes at CRAN
Title: Modelling Spatial Extremes
Description: This package proposes several approaches for spatial
extremes modelling.
SpatialExtremes |only
1 file changed
Permanent link
Author: Seija Sirkia, Klaus Nordhausen, Hannu Oja
Title: Multivariate nonparametric methods based on spatial signs and
ranks
Description: This package contains test and estimates of location,
tests of independence, tests of sphericity and several
estimates of shape all based on spatial signs, symmetrized
signs, ranks and signed ranks.
Diff between SpatialNP versions 1.00 dated 2009-04-22 and 1.0-1 dated 2009-10-16
DESCRIPTION | 8 ++++---- man/spatial.location.Rd | 2 +- 2 files changed, 5 insertions(+), 5 deletions(-)
Author: Mathieu Ribatet
Diff between POT versions 1.0-9 dated 2009-02-10 and 1.1-0 dated 2009-10-16
Title: Generalized Pareto Distribution and Peaks Over Threshold
Description: Some functions useful to perform a Peak Over Threshold
analysis in univariate and bivariate cases. A user's guide is
avalaible.
DESCRIPTION | 16
R/bvGPD.R | 2
R/fitPP.R | 8
inst/doc/POT.Rnw | 2
inst/doc/POT.pdf |17661 ++++++++++++++++++++-----------------------------------
man/confint.Rd | 12
man/diplot.Rd | 2
man/fitGPD.Rd | 6
man/tcplot.Rd | 2
9 files changed, 6462 insertions(+), 11249 deletions(-)
Author: Hormuzd A. Katki
Diff between NestedCohort versions 1.1-1 dated 2009-04-15 and 1.1-2 dated 2009-10-16
Title: Survival Analysis for Cohorts with Missing Covariate Information
Description: Estimate hazard ratios, survival curves and attributable
risks for cohorts with missing covariates, using Cox models or
Kaplan-Meier estimated for strata. This handles studies nested
within cohorts, such as case-cohort studies with stratified
sampling. See
http://www.r-project.org/doc/Rnews/Rnews_2008-1.pdf
DESCRIPTION | 10 +++++-----
inst/doc/NestedCohort.Rnw | 2 +-
inst/doc/NestedCohort.pdf |binary
inst/doc/Rplots.pdf | 6 +++---
inst/doc/auto/NestedCohort.el | 1 -
man/NestedCohort-package.Rd | 3 ++-
6 files changed, 11 insertions(+), 11 deletions(-)
Author: Sebastien Joucla, Christophe Pouzat
Title: Automatic Calcium Imaging Analysis
Description: Simulate and analyse calcium imaging data obtained with
ratiometric dyes
Diff between CalciOMatic versions 1.1-2 dated 2009-06-08 and 1.1-3 dated 2009-10-16
CalciOMatic-1.1-2/CalciOMatic/inst |only CalciOMatic-1.1-3/CalciOMatic/DESCRIPTION | 8 - CalciOMatic-1.1-3/CalciOMatic/R/anova4Fits.R | 2 CalciOMatic-1.1-3/CalciOMatic/R/caBiExp.R | 9 - CalciOMatic-1.1-3/CalciOMatic/R/caFromDf.R | 12 - CalciOMatic-1.1-3/CalciOMatic/R/caFromRatio.R | 58 ++++++-- CalciOMatic-1.1-3/CalciOMatic/R/caMonoBiExpFromIG.R | 2 CalciOMatic-1.1-3/CalciOMatic/R/caMonoExp.R | 11 - CalciOMatic-1.1-3/CalciOMatic/R/directFit.R | 39 +++--- CalciOMatic-1.1-3/CalciOMatic/R/fluo.R | 6 CalciOMatic-1.1-3/CalciOMatic/R/getThetaRatio.R |only CalciOMatic-1.1-3/CalciOMatic/R/igDirect.R | 13 +- CalciOMatic-1.1-3/CalciOMatic/R/igRatio.R | 2 CalciOMatic-1.1-3/CalciOMatic/R/mkFluo4DirectFit.R | 4 CalciOMatic-1.1-3/CalciOMatic/R/mkFunction4DirectFit.R | 12 - CalciOMatic-1.1-3/CalciOMatic/R/mkFunction4RatioFit.R | 4 CalciOMatic-1.1-3/CalciOMatic/R/plot.direct_fit.R | 3 CalciOMatic-1.1-3/CalciOMatic/R/plot.fluo_rawdata.R | 12 + CalciOMatic-1.1-3/CalciOMatic/R/plot.ratio_fit.R | 29 ++-- CalciOMatic-1.1-3/CalciOMatic/R/plot.ratio_fit_list.R | 2 CalciOMatic-1.1-3/CalciOMatic/R/plotCalciOMatic.R | 4 CalciOMatic-1.1-3/CalciOMatic/R/ratioExpPhysio.R | 26 +--- CalciOMatic-1.1-3/CalciOMatic/R/ratioExpSimul.R | 15 +- CalciOMatic-1.1-3/CalciOMatic/R/ratioFitFromCa.R | 91 ++++++++++---- CalciOMatic-1.1-3/CalciOMatic/R/ratioFitFromDf.R | 18 -- CalciOMatic-1.1-3/CalciOMatic/R/transientConvexPart.R | 2 CalciOMatic-1.1-3/CalciOMatic/data/inVitro.rda |binary CalciOMatic-1.1-3/CalciOMatic/man/CalciOMatic-package.Rd | 18 +- CalciOMatic-1.1-3/CalciOMatic/man/anova4Fits.Rd | 21 +-- CalciOMatic-1.1-3/CalciOMatic/man/caBiExp.Rd | 22 +-- CalciOMatic-1.1-3/CalciOMatic/man/caFromDf.Rd | 36 +++-- CalciOMatic-1.1-3/CalciOMatic/man/caFromRatio.Rd | 49 ++++--- CalciOMatic-1.1-3/CalciOMatic/man/caMonoBiExpFromIG.Rd | 14 +- CalciOMatic-1.1-3/CalciOMatic/man/caMonoExp.Rd | 14 +- CalciOMatic-1.1-3/CalciOMatic/man/directFit.Rd | 53 +++----- CalciOMatic-1.1-3/CalciOMatic/man/fluo.Rd | 31 ++-- CalciOMatic-1.1-3/CalciOMatic/man/getThetaRatio.Rd |only CalciOMatic-1.1-3/CalciOMatic/man/igDirect.Rd | 21 +-- CalciOMatic-1.1-3/CalciOMatic/man/igRatio.Rd | 50 +++---- CalciOMatic-1.1-3/CalciOMatic/man/inVitro.Rd | 4 CalciOMatic-1.1-3/CalciOMatic/man/mkFluo4DirectFit.Rd | 8 - CalciOMatic-1.1-3/CalciOMatic/man/mkFunction4DirectFit.Rd | 17 +- CalciOMatic-1.1-3/CalciOMatic/man/mkFunction4RatioFit.Rd | 12 - CalciOMatic-1.1-3/CalciOMatic/man/plot.direct_fit.Rd | 62 ++++----- CalciOMatic-1.1-3/CalciOMatic/man/plot.fluo_rawdata.Rd | 39 +++--- CalciOMatic-1.1-3/CalciOMatic/man/plot.ratio_fit.Rd | 38 +++-- CalciOMatic-1.1-3/CalciOMatic/man/plot.ratio_fit_list.Rd | 49 ++++--- CalciOMatic-1.1-3/CalciOMatic/man/plotCalciOMatic.Rd | 54 ++++---- CalciOMatic-1.1-3/CalciOMatic/man/ratioExpPhysio.Rd | 45 +++--- CalciOMatic-1.1-3/CalciOMatic/man/ratioExpSimul.Rd | 53 ++++---- CalciOMatic-1.1-3/CalciOMatic/man/ratioFitFromCa.Rd | 66 ++++++---- CalciOMatic-1.1-3/CalciOMatic/man/ratioFitFromDf.Rd | 46 ++----- CalciOMatic-1.1-3/CalciOMatic/man/transientConvexPart.Rd | 2 53 files changed, 650 insertions(+), 558 deletions(-)