Author: Guido Schwarzer
Diff between meta versions 1.1-3 dated 2009-10-30 and 1.1-4 dated 2009-11-04
Title: Meta-Analysis with R
Description: Fixed and random effects meta-analysis. Functions for
tests of bias, forest and funnel plot.
ChangeLog | 41 ++++++++++++++++++++++++-----
DESCRIPTION | 8 ++---
R/print.summary.meta.R | 60 +++++++++++++++++++++++++++----------------
R/summary.meta.R | 67 ++++++++++++++++++++++++++-----------------------
man/forest.Rd | 8 +++++
man/metacr.Rd | 5 ++-
man/metagen.Rd | 41 +++++++++++++++++++----------
man/print.meta.Rd | 41 ++++++++++++++++++++---------
8 files changed, 174 insertions(+), 97 deletions(-)
Author: S. M. Barbosa
Title: Multivariate AutoRegressive analysis
Description: R functions for multivariate autoregressive analysis
Diff between mAr versions 1.1-1 dated 2007-04-13 and 1.1-2 dated 2009-11-04
DESCRIPTION | 8 +++++--- R/mAr.eig.R | 2 +- R/mAr.est.R | 2 +- R/mAr.pca.R | 4 ++-- R/mAr.sim.R | 2 +- data/pinkham.rda |binary data/sparrows.rda |binary data/waves.rda |binary man/mAr.est.Rd | 14 +++++++------- 9 files changed, 17 insertions(+), 15 deletions(-)
Author: Antonio Gasparrini and Ben Armstrong
Title: Distributed Lag Non-linear Models
Description: The package dlnm contains functions to specify basis and
cross-basis matrices in order to run distributed lag models and
their non-linear extension, then to predict and graph the
results for a fitted model.
Diff between dlnm versions 1.1.0 dated 2009-10-19 and 1.1.1 dated 2009-11-04
DESCRIPTION | 8 R/crosspred.R | 2 R/mkbasis.R | 4 inst/ChangeLog | 9 inst/doc/Rplots.pdf | 4 inst/doc/dlnmOverview.pdf | 944 +++++++++++++++++++++++----------------------- 6 files changed, 494 insertions(+), 477 deletions(-)
Author: Sergio Salvino Guirreri
Title: Modelling and estimation of the yield curve
Description: Modelling the yield curve with some parametric models. The
models implemented are: Nelson-Siegel, Diebold-Li and Svensson.
The package also includes the data of the term structure of
interest rate of Federal Reserve Bank and European Central
Bank.
Diff between YieldCurve versions 1.0 dated 2009-08-04 and 2.0 dated 2009-11-04
DESCRIPTION | 13 +++++++------ man/Srates.Rd | 12 ++++++------ man/YieldCurve-package.Rd | 10 ++++------ 3 files changed, 17 insertions(+), 18 deletions(-)
Author: Fortran code by H. Akima R port by Albrecht Gebhardt
Diff between akima versions 0.5-3 dated 2009-09-21 and 0.5-4 dated 2009-11-04
Title: Interpolation of irregularly spaced data
Description: Linear or cubic spline interpolation for irregular gridded
data
ChangeLog | 8 ++++----
DESCRIPTION | 6 +++---
man/akima.Rd | 23 +++++++++++------------
3 files changed, 18 insertions(+), 19 deletions(-)
Author: Matthias Kohl
Diff between RobRex versions 0.6.1 dated 2009-02-28 and 0.7 dated 2009-11-04
Title: Optimally robust influence curves for regression and scale
Description: functions for the determination of optimally robust
influence curves in case of linear regression with unknown
scale and standard normal distributed errors where the
regressor is random.
DESCRIPTION | 36 ++++++++++++++++++++--------------
inst/NEWS | 51 ++++++++++++++++++++++++++++++++++++++++++++++++-
inst/TOBEDONE |only
inst/scripts/example.R |only
tests |only
5 files changed, 71 insertions(+), 16 deletions(-)
Author: Matthias Kohl
Diff between RobLox versions 0.6.1 dated 2008-11-30 and 0.7 dated 2009-11-04
Title: Optimally robust influence curves and estimators for location
and scale
Description: Functions for the determination of optimally robust
influence curves and estimators in case of normal location
and/or scale
DESCRIPTION | 36 ++--
NAMESPACE | 3
R/colRoblox.R | 6
R/finiteSampleCorrection.R |only
R/rlsOptIC_TuMad.R | 4
R/roblox.R | 363 ++++++++++++++++++++++++++++++------------
R/rowRoblox.R | 205 ++++++++++++++++++++---
R/sysdata.rda |binary
inst/CITATION | 4
inst/NEWS | 50 +++++
inst/TOBEDONE |only
man/0RobLox-package.Rd |only
man/finiteSampleCorrection.Rd |only
man/roblox.Rd | 28 ++-
man/rowRoblox.Rd | 22 +-
tests |only
16 files changed, 559 insertions(+), 162 deletions(-)
Author: Matthias Kohl, Peter Ruckdeschel
Title: Robust Asymptotic Statistics
Description: Base S4-classes and functions for robust asymptotic
statistics.
Diff between RobAStBase versions 0.1.5 dated 2009-01-13 and 0.7 dated 2009-11-04
DESCRIPTION | 35 - NAMESPACE | 20 R/AllClass.R | 62 + R/AllGeneric.R | 52 + R/AllPlot.R | 211 +++++- R/AllShow.R | 19 R/ContIC.R | 8 R/IC.R | 10 R/Neighborhood.R | 4 R/RobAStBaseOptions.R | 7 R/RobModel.R | 7 R/TotalVarIC.R | 19 R/Weights.R | 14 R/bALEstimate.R | 8 R/comparePlot.R | 354 +++++++++- R/generateICfct.R | 18 R/getBiasIC.R | 2 R/getRiskIC.R | 1 R/getboundedIC.R |only R/infoPlot.R | 386 +++++++++-- R/kStepEstimate.R |only R/kStepEstimator.R | 1172 ++++++++++++++++++++++-------------- R/kStepEstimatorStart.R |only R/locMEstimator.R | 6 R/masked.R |only R/oneStepEstimator.R | 496 +++++++-------- R/optIC.R | 9 R/qqplot.R |only inst/MASKING |only inst/NEWS | 206 ++++++ inst/TOBEDONE |only inst/doc |only man/0RobAStBase-package.Rd | 21 man/ALEstimate-class.Rd | 34 - man/BdStWeight-class.Rd | 8 man/BoundedWeight-class.Rd | 8 man/ContIC-class.Rd | 3 man/ContNeighborhood-class.Rd | 4 man/FixRobModel-class.Rd | 4 man/HampIC-class.Rd | 25 man/HampelWeight-class.Rd | 10 man/IC-class.Rd | 12 man/InfRobModel-class.Rd | 4 man/InfluenceCurve-class.Rd | 8 man/MEstimate-class.Rd | 18 man/Neighborhood-class.Rd | 8 man/OptionalInfluenceCurve-Class.Rd |only man/RobAStBaseMASK.Rd |only man/RobAStBaseOptions.Rd | 14 man/RobAStControl-class.Rd | 3 man/RobModel-class.Rd | 11 man/RobWeight-class.Rd | 4 man/TotalVarIC-class.Rd | 30 man/TotalVarNeighborhood-class.Rd | 4 man/UncondNeighborhood-class.Rd | 4 man/comparePlot.Rd | 118 +++ man/getBoundedIC.Rd |only man/getRiskIC.Rd | 2 man/infoPlot.Rd | 105 ++- man/internals-qqplot.Rd |only man/internals_ddPlot.Rd | 2 man/kStepEstimate-class.Rd | 100 ++- man/kStepEstimator.Rd | 120 ++- man/kStepEstimatorStart-methods.Rd |only man/locMEstimator.Rd | 3 man/masked-methods.Rd |only man/oneStepEstimator.Rd | 57 - man/plot-methods.Rd | 92 ++ man/qqplot.Rd |only tests |only 70 files changed, 2794 insertions(+), 1168 deletions(-)
Author: Matthias Kohl
Diff between ROptRegTS versions 0.6.1 dated 2009-02-28 and 0.7 dated 2009-11-04
Title: Optimally robust estimation for regression-type models
Description: Optimally robust estimation for regression-type models
using S4 classes and methods
DESCRIPTION | 34 ++++++++++++++++++++--------------
inst/NEWS | 35 +++++++++++++++++++++++++++++++++++
inst/TOBEDONE |only
man/CondIC-class.Rd | 2 +-
man/CondNeighborhood-class.Rd | 2 +-
man/FixRobRegTypeModel-class.Rd | 2 +-
man/InfRobRegTypeModel-class.Rd | 2 +-
man/RegTypeFamily-class.Rd | 2 +-
man/generateIC-methods.Rd | 2 +-
man/getAsRiskRegTS.Rd | 2 +-
man/getFiRiskRegTS.Rd | 2 +-
man/getFixClipRegTS.Rd | 2 +-
man/getIneffDiff-methods.Rd | 2 +-
man/getInfCentRegTS.Rd | 2 +-
man/getInfClipRegTS.Rd | 2 +-
man/getInfGammaRegTS.Rd | 4 ++--
man/getInfStandRegTS.Rd | 2 +-
man/leastFavorableRadius-methods.Rd | 2 +-
man/optIC-methods.Rd | 2 +-
man/radiusMinimaxIC-methods.Rd | 2 +-
tests |only
21 files changed, 73 insertions(+), 32 deletions(-)
Author: Matthias Kohl
Title: Optimally robust estimation - old version
Description: Optimally robust estimation using S4 classes and methods.
Old version still needed for current versions of ROptRegTS and
RobRex.
Diff between ROptEstOld versions 0.5.2 dated 2009-02-28 and 0.7 dated 2009-11-04
ROptEstOld-0.5.2/ROptEstOld/R/DistrSymmList.R |only ROptEstOld-0.5.2/ROptEstOld/R/PosDefSymmMatrix.R |only ROptEstOld-0.5.2/ROptEstOld/man/DistrSymmList-class.Rd |only ROptEstOld-0.5.2/ROptEstOld/man/DistrSymmList.Rd |only ROptEstOld-0.5.2/ROptEstOld/man/DistributionSymmetry-class.Rd |only ROptEstOld-0.5.2/ROptEstOld/man/EllipticalSymmetry-class.Rd |only ROptEstOld-0.5.2/ROptEstOld/man/EllipticalSymmetry.Rd |only ROptEstOld-0.5.2/ROptEstOld/man/NoSymmetry-class.Rd |only ROptEstOld-0.5.2/ROptEstOld/man/NoSymmetry.Rd |only ROptEstOld-0.5.2/ROptEstOld/man/OptionalNumeric-class.Rd |only ROptEstOld-0.5.2/ROptEstOld/man/PosDefSymmMatrix-class.Rd |only ROptEstOld-0.5.2/ROptEstOld/man/PosDefSymmMatrix.Rd |only ROptEstOld-0.5.2/ROptEstOld/man/SphericalSymmetry-class.Rd |only ROptEstOld-0.5.2/ROptEstOld/man/SphericalSymmetry.Rd |only ROptEstOld-0.5.2/ROptEstOld/man/Symmetry-class.Rd |only ROptEstOld-0.7/ROptEstOld/DESCRIPTION | 33 +++--- ROptEstOld-0.7/ROptEstOld/NAMESPACE | 19 --- ROptEstOld-0.7/ROptEstOld/R/AllClass.R | 55 ---------- ROptEstOld-0.7/ROptEstOld/R/AllGeneric.R | 6 - ROptEstOld-0.7/ROptEstOld/R/AllShow.R | 7 - ROptEstOld-0.7/ROptEstOld/R/Symmetry.R | 17 --- ROptEstOld-0.7/ROptEstOld/inst |only ROptEstOld-0.7/ROptEstOld/man/EvenSymmetric.Rd | 2 ROptEstOld-0.7/ROptEstOld/man/FunctionSymmetry-class.Rd | 3 ROptEstOld-0.7/ROptEstOld/man/GammaFamily.Rd | 2 ROptEstOld-0.7/ROptEstOld/man/OddSymmetric.Rd | 2 ROptEstOld-0.7/ROptEstOld/man/TotalVarIC-class.Rd | 3 ROptEstOld-0.7/ROptEstOld/man/asUnOvShoot-class.Rd | 2 ROptEstOld-0.7/ROptEstOld/man/fiUnOvShoot-class.Rd | 2 29 files changed, 35 insertions(+), 118 deletions(-)
Author: Matthias Kohl, Peter Ruckdeschel
Title: Optimally robust estimation
Description: Optimally robust estimation in general smoothly
parameterized models using S4 classes and methods.
Diff between ROptEst versions 0.6.3 dated 2009-01-13 and 0.7 dated 2009-11-04
DESCRIPTION | 35 NAMESPACE | 4 R/AllGeneric.R | 5 R/LowerCaseMultivariate.R | 83 + R/cniperCont.R | 10 R/getAsRisk.R | 38 R/getFixRobIC_fiUnOvShoot.R | 2 R/getIneffDiff.R | 43 R/getInfCent.R | 50 R/getInfClip.R | 4 R/getInfGamma.R | 28 R/getInfLM.R |only R/getInfRobIC_asBias.R | 128 + R/getInfRobIC_asCov.R | 66 R/getInfRobIC_asGRisk.R | 855 +++++++++-- R/getInfRobIC_asHampel.R | 557 +++++-- R/getInfRobIC_asUnOvShoot.R | 5 R/getInfStand.R | 2 R/getInfV.R | 28 R/getModifyIC.R | 186 +- R/leastFavorableRadius.R | 61 R/optIC.R | 47 R/optRisk.R | 4 R/radiusMinimaxIC.R | 78 - R/roptest.R | 63 inst/NEWS | 188 ++ inst/TOBEDONE |only inst/scripts/BinomialModel.R | 2409 +++++++++++++++++++++++++++++++- inst/scripts/ExponentialScaleModel.R | 203 ++ inst/scripts/GammaModel.R | 56 inst/scripts/GumbelLocationModel.R | 2 inst/scripts/LognormalAndNormalModel.R | 8 inst/scripts/NormalLocationScaleModel.R | 82 + inst/scripts/PoissonModel.R | 15 man/0ROptEst-package.Rd | 26 man/getAsRisk.Rd | 148 + man/getFixRobIC.Rd | 3 man/getIneffDiff.Rd | 17 man/getInfCent.Rd | 19 man/getInfClip.Rd | 6 man/getInfGamma.Rd | 14 man/getInfRobIC.Rd | 119 + man/getInfStand.Rd | 6 man/getInfV.Rd | 6 man/getModifyIC.Rd | 51 man/getRiskIC.Rd | 2 man/getinfLM.Rd |only man/internals.Rd |only man/leastFavorableRadius.Rd | 14 man/minmaxBias.Rd | 32 man/optIC.Rd | 22 man/radiusMinimaxIC.Rd | 21 man/roptest.Rd | 72 tests |only 54 files changed, 5174 insertions(+), 749 deletions(-)
Author: Tony Plate
Diff between trackObjs versions 0.8-3 dated 2009-02-20 and 0.8-6 dated 2009-11-04
Title: Track Objects
Description: Stores objects in files on disk so that files are
automatically rewritten when objects are changed, and so that
objects are accessible but do not occupy memory until they are
accessed. Also tracks times when objects are created and
modified, and caches some basic characteristics of objects to
allow for fast summaries of objects.
trackObjs-0.8-3/trackObjs/man/trackObjs.Rd |only
trackObjs-0.8-6/trackObjs/DESCRIPTION | 32 +++++++++++----------
trackObjs-0.8-6/trackObjs/NEWS | 7 +++-
trackObjs-0.8-6/trackObjs/man/track.design.Rd | 6 +--
trackObjs-0.8-6/trackObjs/man/track.future.Rd | 2 -
trackObjs-0.8-6/trackObjs/man/track.manage.Rd | 2 -
trackObjs-0.8-6/trackObjs/man/track.options.Rd | 2 -
trackObjs-0.8-6/trackObjs/man/track.rebuild.Rd | 2 -
trackObjs-0.8-6/trackObjs/man/track.setup.Rd | 2 -
trackObjs-0.8-6/trackObjs/man/track.status.Rd | 2 -
trackObjs-0.8-6/trackObjs/man/track.summary.Rd | 2 -
trackObjs-0.8-6/trackObjs/man/trackObjs-package.Rd |only
12 files changed, 33 insertions(+), 26 deletions(-)
Author: Graham Williams
Diff between rattle versions 2.5.1 dated 2009-10-26 and 2.5.2 dated 2009-11-04
Title: A graphical user interface for data mining in R using GTK
Description: Rattle (the R Analytic Tool To Learn Easily) provides a
Gnome (RGtk2) based interface to R functionality for data
mining. The aim is to provide a simple and intuitive interface
that allows a user to quickly load data from a CSV file (or via
ODBC), transform and explore the data, build and evaluate
models, and export models as PMML (predictive modelling markup
language) or as scores. All of this with knowing little about
R. All R commands are logged and commented through the log tab
and so available to the user as a script file or as an aide to
the user to interact directly with R itself. Rattle also
exports a number of utility functions and the graphical user
interface, invoked as rattle(), does not need to be run to
deploy these.
DESCRIPTION | 19 ++++++------
R/explore.R | 27 +++++++-----------
R/export.R | 12 +++++---
R/model.R | 26 +++++++++--------
R/rattle.R | 17 +++--------
R/survival.R | 55 ++++++++++++++++++++++++++++++++++++
data/audit.RData |binary
data/weather.RData |binary
data/weatherCanberra.RData |binary
data/weatherSydney.RData |binary
inst/arff/weather.arff | 4 +-
inst/arff/weatherCanberra.arff | 35 ++++++++++++++++++++++-
inst/arff/weatherSydney.arff | 37 ++++++++++++++++++++++--
inst/csv/weatherCanberra.csv | 31 ++++++++++++++++++++
inst/csv/weatherSydney.csv | 31 ++++++++++++++++++++
inst/etc/rattle.glade | 61 ++++++++++++++++++++---------------------
man/internal.Rd | 2 +
17 files changed, 265 insertions(+), 92 deletions(-)
Author: Graham Williams, Michael Hahsler (arules), Zementis Inc, Hemant
Ishwaran, Udaya B. Kogalur, Rajarshi Guha
Title: Generate PMML for various models
Description: The Predictive Modelling Markup Language (PMML) is a
language for representing models, in an application independent
way. Such models can then be loaded into other applications
supporting PMML, including ADAPA from Zementis, Teradata
Warehouse Miner and IBM's DB2. The package provides a generic
pmml function to generate pmml for an object. Using a S3
generic function the approriate method for the class of the
supplied object is dispatched. The package currently supports
the export of PMML for linear regression, SVMs, rpart
classification trees, randomSurvivalForest forest models, and
kmeans clusters. This package is part of the Rattle toolkit.
Diff between pmml versions 1.2.19 dated 2009-10-26 and 1.2.20 dated 2009-11-04
DESCRIPTION | 8 ++++---- NAMESPACE | 1 + R/pmml.R | 5 +++-- R/pmml.coxph.R |only man/pmml.coxph.Rd |only 5 files changed, 8 insertions(+), 6 deletions(-)
Author: Rolf Turner
Diff between mixreg versions 0.0-2 dated 2006-09-12 and 0.0-3 dated 2009-11-04
Title: Functions to fit mixtures of regressions.
Description: Fits mixtures of (possibly multivariate) regressions
(which has been described as doing ANCOVA when you don't know
the levels).
mixreg-0.0-2/mixreg/aphids.dat |only
mixreg-0.0-3/mixreg/ChangeLog |only
mixreg-0.0-3/mixreg/DESCRIPTION | 18 ++++++++++--------
mixreg-0.0-3/mixreg/R/boot.sam.R | 4 ++--
mixreg-0.0-3/mixreg/inst/aphids.dat |only
mixreg-0.0-3/mixreg/man/plot.cband.Rd | 2 +-
mixreg-0.0-3/mixreg/man/plot.mresid.Rd | 2 +-
7 files changed, 14 insertions(+), 12 deletions(-)
Author: Rolf Turner
Diff between deldir versions 0.0-8 dated 2009-04-04 and 0.0-9 dated 2009-11-04
Title: Delaunay Triangulation and Dirichlet (Voronoi) Tessellation.
Description: Calculates the Delaunay triangulation and the Dirichlet or
Voronoi tessellation (with respect to the entire plane) of a
planar point set.
ChangeLog |only
DESCRIPTION | 8 ++++----
INDEX | 1 +
R/tile.centroids.R |only
inst/READ_ME | 5 +++++
man/tile.centroids.Rd |only
man/tile.list.Rd | 2 +-
7 files changed, 11 insertions(+), 5 deletions(-)
Author: Stefano Iacus
Diff between cem versions 1.0.120 dated 2009-10-21 and 1.0.127 dated 2009-11-04
Title: CEM: Software for Coarsened Exact Matching
Description: This program implements the coarsened exact matching
algorithm (and many extensions) described in Stefano M. Iacus,
Gary King, and Giuseppe Porro, "Causal Inference Without
Balance Checking: Coarsened Exact Matching,"
http://gking.harvard.edu/files/abs/cem-plus-abs.shtml
DESCRIPTION | 8
R/L1profile.R | 131 -
R/cem.main.R | 2
R/imb.meas.R | 181 -
inst/doc/Rplots.pdf | 50
inst/doc/cem.Rnw | 2
inst/doc/cem.pdf | 5676 ++++++++++++++++++--------------------------------
inst/doc/coarsen1.pdf | 28
inst/doc/coarsen2.pdf | 28
inst/doc/copyRd.Rout | 2
inst/doc/index.shtml | 4
inst/doc/teff.pdf | 38
man/L1.profile.Rd | 42
13 files changed, 2306 insertions(+), 3886 deletions(-)