Author: David Meyer
Diff between StatDataML versions 1.0-18 dated 2009-04-26 and 1.0-19 dated 2009-12-02
Title: implementation of the StatDataML proposal
Description: read and write StatDataML files
DESCRIPTION | 8 -
R/handlers.R | 134 ++++++++++-----------
R/readArraySDML.R | 294 ++++++++++++++++++++++++-----------------------
R/readDimensionSDML.R | 22 ++-
R/readListSDML.R | 17 +-
R/readSDML.R | 55 ++++----
R/readTypeSDML.R | 78 +++++++-----
R/writeDescriptionSDML.R | 32 ++---
R/writeSDML.R | 49 +++----
man/readSDML.Rd | 24 +--
10 files changed, 369 insertions(+), 344 deletions(-)
Author: Edzer J. Pebesma
Diff between gstat versions 0.9-64 dated 2009-11-03 and 0.9-65 dated 2009-12-02
Title: geostatistical modelling, prediction and simulation
Description: variogram modelling; simple, ordinary and universal point
or block (co)kriging, sequential Gaussian or indicator
(co)simulation; variogram and variogram map plotting utility
functions.
DESCRIPTION | 8
NAMESPACE | 2
R/fit.variogram.reml.R | 2
R/gstat.R | 2
R/krige0.R |only
R/predict.gstat.R | 2
R/variogram.default.R | 2
demo/00Index | 1
demo/comp_geoR.R |only
inst/ChangeLog |only
inst/doc/gstat.pdf |30815 ++++++++++++++++++++++++-------------------------
man/gstat.Rd | 2
man/krige.Rd | 39
man/variogram.Rd | 2
src/data.c | 10
src/gls.c | 3
src/glvars.c | 2
src/lex.c | 43
src/lex.l | 3
src/parse.c | 551
src/parse.h | 44
src/random.c | 2
src/version.h | 6
tests/krige0.R |only
tests/krige0.Rout.save |only
tests/vdist.Rout.save |only
26 files changed, 15899 insertions(+), 15642 deletions(-)
Author: Bernhard Meindl
Title: statistical disclosure control for tabular data
Description: R-Package for statistical disclosure control for tabular
data.
Diff between sdcTable versions 0.0.2 dated 2009-01-26 and 0.0.6 dated 2009-12-02
DESCRIPTION | 23 - NAMESPACE | 2 R/calcSubset.r | 62 -- R/createFullData.r | 546 +++++++++--------------- R/genCodesFromFile.r |only R/processTableHITAS.r | 54 -- R/processTableHYPERCUBE.r | 995 ++++++++++++++++++++++----------------------- R/protectTable.r | 42 - R/splitPrimarySupps.r | 54 -- R/zzz.R | 5 data/exampleFullData.RData |binary inst |only man/createFullData.Rd | 36 + man/exampleFullData.Rd | 2 man/genCodesFromFile.Rd |only man/protectTable.Rd | 16 16 files changed, 829 insertions(+), 1008 deletions(-)
Author: Edzer Pebesma
Diff between intamapInteractive versions 1.0-7 dated 2009-10-05 and 1.0-8 dated 2009-12-02
More information about intamapInteractive at CRAN
Title: procedures for automated interpolation - methods only to be used
interactively, not included in intamap package
Description: A package that provides additional functionality for
interpolation spatial interpolation.
DESCRIPTION | 12 +--
R/calculateMukv.R | 25 ++----
R/optimizeNetwork.R | 18 +++-
R/ssaMap.R | 65 ++++++++++++----
R/ssaOptim.R | 56 ++++++++++++--
man/biasCorr.Rd | 12 ++-
man/optimizeNetwork.Rd | 161 ++++++++++++++++++++++++++++-------------
man/ssaOptim.Rd | 20 ++++-
tests/optimizingTest.R | 16 ++--
tests/optimizingTest.Rout.save | 26 +++---
10 files changed, 286 insertions(+), 125 deletions(-)
Permanent link
Author: Chong Gu
Diff between gss versions 1.0-5 dated 2009-03-10 and 1.1-0 dated 2009-12-02
Title: General Smoothing Splines
Description: A comprehensive package for structural multivariate
function estimation using smoothing splines.
gss-1.0-5/gss/src/dnewton1.f |only
gss-1.0-5/gss/src/hrkl.f |only
gss-1.0-5/gss/src/hzdnewton1.f |only
gss-1.0-5/gss/src/ratfor/dnewton1.r |only
gss-1.0-5/gss/src/ratfor/hrkl.r |only
gss-1.0-5/gss/src/ratfor/hzdnewton1.r |only
gss-1.1-0/gss/ChangeLog | 17 +
gss-1.1-0/gss/DESCRIPTION | 11 -
gss-1.1-0/gss/INDEX | 16 +
gss-1.1-0/gss/R/cdssden.R | 29 ++-
gss-1.1-0/gss/R/drkpk.R | 59 ++++--
gss-1.1-0/gss/R/dssden.R | 29 ++-
gss-1.1-0/gss/R/grkpk.R | 60 ++++--
gss-1.1-0/gss/R/gssanova.R | 18 +-
gss-1.1-0/gss/R/gssanova0.R | 2
gss-1.1-0/gss/R/hzdrate.sshzd.R | 6
gss-1.1-0/gss/R/predict.ssllrm.R |only
gss-1.1-0/gss/R/print.R | 21 ++
gss-1.1-0/gss/R/project.gssanova.R | 29 +--
gss-1.1-0/gss/R/project.ssanova.R | 33 ++-
gss-1.1-0/gss/R/project.ssden.R | 65 +++----
gss-1.1-0/gss/R/project.sshzd.R | 71 ++++----
gss-1.1-0/gss/R/project.sshzd1.R |only
gss-1.1-0/gss/R/project.ssllrm.R |only
gss-1.1-0/gss/R/rkpk.R | 62 ++++---
gss-1.1-0/gss/R/ssanova.R | 19 +-
gss-1.1-0/gss/R/ssanova0.R | 2
gss-1.1-0/gss/R/ssden.R | 47 ++---
gss-1.1-0/gss/R/sshzd.R | 130 ++++++++++----
gss-1.1-0/gss/R/sshzd1.R |only
gss-1.1-0/gss/R/ssllrm.R |only
gss-1.1-0/gss/man/drkpk.Rd | 29 ++-
gss-1.1-0/gss/man/gssanova.Rd | 6
gss-1.1-0/gss/man/gssanova0.Rd | 2
gss-1.1-0/gss/man/predict.ssanova.Rd | 6
gss-1.1-0/gss/man/predict.ssllrm.Rd |only
gss-1.1-0/gss/man/print.Rd | 4
gss-1.1-0/gss/man/project.Rd | 12 +
gss-1.1-0/gss/man/rkpk.Rd | 10 -
gss-1.1-0/gss/man/rkpk0.Rd | 6
gss-1.1-0/gss/man/ssanova.Rd | 27 ++-
gss-1.1-0/gss/man/ssden.Rd | 32 ++-
gss-1.1-0/gss/man/sshzd.Rd | 30 ++-
gss-1.1-0/gss/man/ssllrm.Rd |only
gss-1.1-0/gss/src/dcoef.f | 21 +-
gss-1.1-0/gss/src/dcore.f | 67 +++----
gss-1.1-0/gss/src/dcrdr.f | 49 ++---
gss-1.1-0/gss/src/ddeev.f | 219 ++++++++++++-------------
gss-1.1-0/gss/src/deval.f | 25 +-
gss-1.1-0/gss/src/dgold.f | 53 ++----
gss-1.1-0/gss/src/dmcdc.f | 37 ++--
gss-1.1-0/gss/src/dmudr.f | 15 -
gss-1.1-0/gss/src/dmudr1.f | 197 +++++++++++-----------
gss-1.1-0/gss/src/dnewton.f | 289 ++++++++++++++++++++++++++++++++-
gss-1.1-0/gss/src/dqrslm.f | 29 +--
gss-1.1-0/gss/src/dsidr.f | 24 +-
gss-1.1-0/gss/src/dsms.f | 35 ++-
gss-1.1-0/gss/src/dstup.f | 19 +-
gss-1.1-0/gss/src/dsytr.f | 35 ++-
gss-1.1-0/gss/src/dtrev.f | 28 +--
gss-1.1-0/gss/src/hzdaux.f | 176 +++++++++++++++++++-
gss-1.1-0/gss/src/hzdnewton.f | 276 +++++++++++++++++++++++++++++++
gss-1.1-0/gss/src/hzdnewton10.f |only
gss-1.1-0/gss/src/llrmnewton.f |only
gss-1.1-0/gss/src/ratfor/dnewton.r | 204 +++++++++++++++++++++++
gss-1.1-0/gss/src/ratfor/hzdaux.r | 132 +++++++++++++++
gss-1.1-0/gss/src/ratfor/hzdnewton.r | 188 +++++++++++++++++++++
gss-1.1-0/gss/src/ratfor/hzdnewton10.r |only
gss-1.1-0/gss/src/ratfor/llrmnewton.r |only
69 files changed, 2282 insertions(+), 726 deletions(-)
Author: Vincent Calcagno
Diff between glmulti versions 0.6-1 dated 2009-12-01 and 0.6-2 dated 2009-12-02
Title: GLM model selection and multimodel inference made easy
Description: Automated model selection for GLMs. Provides a wrapper for
glm and similar functions, automatically generating all
possible models (under constraints set by the user) with the
specified response and explanatory variables, and finding the
best models in terms of some Information Criterion (AIC, AICc
or BIC). Can handle very large numbers of candidate models.
Features a Genetic Algorithm to find the best models when an
exhaustive screening of the candidates is not feasible.
glmulti-0.6-1/glmulti/.onLoad.R |only
glmulti-0.6-2/glmulti/ChangeLog | 8 +++
glmulti-0.6-2/glmulti/DESCRIPTION | 6 +-
glmulti-0.6-2/glmulti/R/glmulti.r | 25 +++++++----
glmulti-0.6-2/glmulti/R/onLoad.R |only
glmulti-0.6-2/glmulti/inst/java/glmulti.jar |binary
glmulti-0.6-2/glmulti/inst/java/glmulti/ModelGenerator.class |binary
7 files changed, 26 insertions(+), 13 deletions(-)
Author: Andy Bunn
Title: Dendrochronology Program Library in R
Description: This package contains functions for performing some
standard tree-ring analyses.
Diff between dplR versions 1.2 dated 2009-10-27 and 1.2.1 dated 2009-12-02
DESCRIPTION | 8 ++++---- R/corr.rwl.seg.R | 10 ++++++---- R/detrend.series.R | 3 +-- R/ffcsaps.R | 12 +++++++++--- R/normalize.xdate.R | 1 - 5 files changed, 20 insertions(+), 14 deletions(-)
Author: Henning Redestig
Title: CCMN and other noRMalizatioN methods for metabolomics data
Description: Implements the Cross-contribution Compensating Multiple
standard Normalization (CCMN) method and other normalization
algorithms.
Diff between crmn versions 0.0.7 dated 2009-11-30 and 0.0.8 dated 2009-12-02
DESCRIPTION | 6 R/norm.R | 28 - inst/doc/crmn.pdf | 1306 +++++++++++++++++++++++++++--------------------------- man/normFit.Rd | 8 4 files changed, 678 insertions(+), 670 deletions(-)
Author: Yihui Xie
Title: Demonstrate Animations in Statistics
Description: This package consists of various functions for animations
in statistics, covering many areas such as probability theory,
mathematical statistics, multivariate statistics, nonparametric
statistics, sampling survey, linear models, time series,
computational statistics, data mining and machine learning.
These functions might be of help in teaching statistics and
data analysis.
Diff between animation versions 1.0-9 dated 2009-11-12 and 1.0-10 dated 2009-12-02
DESCRIPTION | 10 +++++----- R/MC.hitormiss.R |only R/MC.samplemean.R |only R/ecol.death.sim.R | 1 + R/price.ani.R |only R/saveLatex.R | 2 +- R/saveMovie.R | 10 ++++++---- data/vanke1127.rda |only inst/NEWS | 41 ++++++++++++++++++++++++++++++++++------- man/MC.hitormiss.Rd |only man/MC.samplemean.Rd |only man/ecol.death.sim.Rd | 6 +++++- man/pollen.Rd | 4 ++-- man/price.ani.Rd |only man/saveLatex.Rd | 2 +- man/saveMovie.Rd | 7 +++++-- man/tidy.source.Rd | 2 +- man/vanke1127.Rd |only 18 files changed, 61 insertions(+), 24 deletions(-)
Author: Felipe de Mendiburu
Title: Statistical Procedures for Agricultural Research
Description: Agricolae was presented on 28 August 2009 in the thesis "A
statistical analysis tool for agricultural research" to obtain
the degree of Master on science, mention Systems Engineering,
of the facultad de ingenieria industrial y de sistemas -
Universidad Nacional de Ingenieria, Lima-Peru (UNI), being
approved with the qualification of 18.14 in a scale from 0 to
20. The thesis includes a satisfaction survey of the library,
with an index quality of the software of 0.8 in scale of 0-1.
These functions are currently used by the International Potato
Center (CIP), the Universidad Nacional Agraria La Molina
(UNALM-PERU), and the Instituto Nacional de Innovacion Agraria
(INIA-PERU). It comprises the functionality of statistical
analysis into experimental designs applied specially in field
experiments in agriculture and plant breeding: Lattice,
factorial, complete and incomplete block, Latin Square, Graeco,
Alpha designs, Cyclic, split and strip plot designs, comparison
of multi-location trials, comparison between treatments,
resampling, simulation, biodiversity indexes and consensus
cluster.
Diff between agricolae versions 1.0-7 dated 2009-04-20 and 1.0-8 dated 2009-12-02
DESCRIPTION | 38 ++++++++++++++++++++++---------------- R/AMMI.R | 14 ++++++-------- R/LSD.test.R | 19 ++++++++++++------- R/PBIB.test.R | 2 +- R/design.crd.R | 4 ++-- R/design.dau.R |only R/design.lattice.R | 2 +- R/design.split.R |only R/design.strip.R |only R/durbin.test.R | 7 ++++--- R/friedman.R | 16 +++++++++------- R/kruskal.R | 6 ++---- R/resampling.model.R | 2 +- R/simulation.model.R | 2 +- man/AMMI.Rd | 10 ++++------ man/AMMI.contour.Rd | 2 +- man/PBIB.test.Rd | 2 +- man/RioChillon.Rd | 1 - man/agricolae.package.Rd | 6 +++--- man/design.dau.Rd |only man/design.split.Rd |only man/design.strip.Rd |only man/friedman.Rd | 1 - man/kruskal.Rd | 1 - man/resampling.model.Rd | 26 +++++++++++++++----------- man/simulation.model.Rd | 18 +++++++++--------- man/strip.plot.Rd | 4 ++++ 27 files changed, 98 insertions(+), 85 deletions(-)
Author: Valerie Obenchain
Title: Data retrieval from a Labkey database
Description: This package imports data from a labkey database into an R
data frame
Diff between Rlabkey versions 0.0.8 dated 2009-07-03 and 0.0.9 dated 2009-12-02
Rlabkey-0.0.8/Rlabkey/LICENSE |only Rlabkey-0.0.8/Rlabkey/R/makeUrl.R |only Rlabkey-0.0.9/Rlabkey/DESCRIPTION | 8 ++-- Rlabkey-0.0.9/Rlabkey/NEWS | 3 + Rlabkey-0.0.9/Rlabkey/R/makeDF.R | 22 +++++++----- Rlabkey-0.0.9/Rlabkey/R/parseHeader.R | 6 +-- Rlabkey-0.0.9/Rlabkey/license |only Rlabkey-0.0.9/Rlabkey/man/labkey.executeSql.Rd | 43 +++++++++++++------------ Rlabkey-0.0.9/Rlabkey/man/labkey.selectRows.Rd | 32 +++++++++--------- Rlabkey-0.0.9/Rlabkey/man/makeFilter.Rd | 14 ++++---- 10 files changed, 70 insertions(+), 58 deletions(-)
Author: Ian Fellows
Title: Deducer
Description: An intuitive, cross-platform graphical data analysis
system. It uses menus and dialogs to guide the user efficiently
through the data manipulation and analysis process, and has an
excel like spreadsheet for easy data frame visualization and
editing. Deducer works best when used with the Java based R GUI
JGR, but the dialogs can be called from the command line.
Dialogs have also been integrated into the Windows Rgui.
Diff between Deducer versions 0.2-0 dated 2009-11-02 and 0.2-1 dated 2009-12-02
Deducer-0.2-0/Deducer/man/define.groups.Rd |only Deducer-0.2-1/Deducer/DESCRIPTION | 10 Deducer-0.2-1/Deducer/R/Deducer.R | 181 ++++++---- Deducer-0.2-1/Deducer/R/addMenu.R |only Deducer-0.2-1/Deducer/R/contingency.tables.R | 27 - Deducer-0.2-1/Deducer/R/cor.matrix.R | 31 + Deducer-0.2-1/Deducer/R/descriptive.table.R | 26 - Deducer-0.2-1/Deducer/R/ggcorplot.R | 9 Deducer-0.2-1/Deducer/R/k.sample.test.R | 26 - Deducer-0.2-1/Deducer/R/one.sample.test.R | 15 Deducer-0.2-1/Deducer/R/onesample.plot.R | 42 +- Deducer-0.2-1/Deducer/R/oneway.plot.R | 49 +- Deducer-0.2-1/Deducer/R/qscatter_array.R | 42 +- Deducer-0.2-1/Deducer/R/recode.variables.R | 2 Deducer-0.2-1/Deducer/R/rocplot.R | 4 Deducer-0.2-1/Deducer/R/sort.data.frame.R | 2 Deducer-0.2-1/Deducer/R/summary.lm.R | 1 Deducer-0.2-1/Deducer/R/two.sample.test.R | 42 -- Deducer-0.2-1/Deducer/R/util.R | 68 ++- Deducer-0.2-1/Deducer/inst/java/deducer.jar |binary Deducer-0.2-1/Deducer/inst/javasrc/deducer/Deducer.java | 54 ++ Deducer-0.2-1/Deducer/inst/javasrc/deducer/data/DataFrameWindow.java | 6 Deducer-0.2-1/Deducer/inst/javasrc/deducer/menu/ContingencyDialog.java | 8 Deducer-0.2-1/Deducer/inst/javasrc/deducer/menu/CorModel.java | 5 Deducer-0.2-1/Deducer/inst/javasrc/deducer/menu/DescriptivesDialog.java | 15 Deducer-0.2-1/Deducer/inst/javasrc/deducer/menu/KSampleDialog.java | 8 Deducer-0.2-1/Deducer/inst/javasrc/deducer/menu/OneSampleDialog.java | 15 Deducer-0.2-1/Deducer/inst/javasrc/deducer/menu/OneWayPlotModel.java | 6 Deducer-0.2-1/Deducer/inst/javasrc/deducer/menu/twosample/TwoSampleModel.java | 68 +-- Deducer-0.2-1/Deducer/man/add.cross.strata.test.Rd | 6 Deducer-0.2-1/Deducer/man/add.mantel.haenszel.Rd | 6 Deducer-0.2-1/Deducer/man/add.test.Rd | 6 Deducer-0.2-1/Deducer/man/contingency.tables.Rd | 10 Deducer-0.2-1/Deducer/man/cor.matrix.Rd | 26 - Deducer-0.2-1/Deducer/man/d.Rd |only Deducer-0.2-1/Deducer/man/deducer.addmenu.Rd |only Deducer-0.2-1/Deducer/man/descriptive.table.Rd | 31 + Deducer-0.2-1/Deducer/man/dich.Rd |only Deducer-0.2-1/Deducer/man/extract.counts.Rd | 2 Deducer-0.2-1/Deducer/man/ggcorplot.Rd | 4 Deducer-0.2-1/Deducer/man/k.sample.test.Rd | 19 - Deducer-0.2-1/Deducer/man/one.sample.test.Rd | 28 - Deducer-0.2-1/Deducer/man/onesample.plot.Rd | 13 Deducer-0.2-1/Deducer/man/oneway.plot.Rd | 10 Deducer-0.2-1/Deducer/man/qscatter_array.Rd | 19 - Deducer-0.2-1/Deducer/man/two.sample.test.Rd | 26 - 46 files changed, 554 insertions(+), 414 deletions(-)