Author: Michael Hahsler, Christian Buchta, Bettina Gruen and Kurt
Hornik
Title: Mining Association Rules and Frequent Itemsets
Description: Provides the infrastructure for representing, manipulating
and analyzing transaction data and patterns (frequent itemsets
and association rules). Also provides interfaces to C
implementations of the association mining algorithms Apriori
and Eclat by C. Borgelt.
Diff between arules versions 1.0-0 dated 2009-03-24 and 1.0-1 dated 2009-12-03
DESCRIPTION | 8 NAMESPACE | 3 R/apriori.R | 9 R/eclat.R | 7 R/itemMatrix.R | 20 R/itemsets.R | 2 data/Epub.rda |binary inst/CITATION | 20 inst/doc/arules.Rnw | 6 inst/doc/arules.pdf | 7817 +++++++++++++++++++++---------------------- man/Epub.Rd | 4 man/WRITE.Rd | 2 man/dissimilarity.Rd | 2 man/itemMatrix-class.Rd | 6 man/tidLists-class.Rd | 2 tests/associations.Rout.save | 12 tests/extract.Rout.save | 12 tests/interfaces.Rout.save | 27 tests/matrix.Rout.save | 14 tests/measures.Rout.save | 18 tests/sets.Rout.save | 15 tests/transactions.Rout.save | 26 22 files changed, 4067 insertions(+), 3965 deletions(-)
Author: Frank Schaarschmidt, Daniel Gerhard
Title: Confidence intervals for two sample comparisons
Description: Calculation of the parametric, nonparametric confidence
intervals for the difference or ratio of location parameters
and for the difference, ratio and odds-ratio of binomial
proportions for comparison of independent samples. CI are not
adjusted for multiplicity. A by statement allows calculation of
CI separately for the levels of further factors. Please note
that, when a (generalized) linear model can be reasonably
assumed, there are smarter methods for CI calculation available
than are implemented in this package!
Diff between pairwiseCI versions 0.1-17 dated 2009-10-14 and 0.1-19 dated 2009-12-03
DESCRIPTION | 8 ++++---- R/pairwiseMEP.data.frame.R | 1 + R/pairwiseTest.R | 11 +++++------ R/pairwiseTestCont.R | 4 +--- R/pairwiseTestProp.R | 4 +--- man/as.data.frame.pairwiseCI.Rd | 7 +++---- man/as.data.frame.pairwiseMEP.Rd | 15 ++++++++------- man/pairwiseCI.Rd | 11 ++++------- man/pairwiseMEP.Rd | 6 ++++-- man/pairwiseTest.Rd | 6 +----- man/pairwiseTestInt.Rd | 6 ++---- man/plotCI.pairwiseMEP.Rd | 8 +++++--- 12 files changed, 39 insertions(+), 48 deletions(-)
Author: Michael Friendly and Stephane Dray
Title: Guerry: maps, data and methods related to Guerry (1833) "Moral
Statistics of France"
Description: This package comprises maps of France in 1830, data from
A.-M. Guerry and others and statistical and graphic methods
related to Guerry's "Moral Statistics of France".
Diff between Guerry versions 1.1 dated 2009-10-30 and 1.3 dated 2009-12-03
DESCRIPTION | 14 ++++++-------- R |only inst/ChangeLog | 13 +++++++++++-- inst/doc |only man/Guerry-package.Rd | 31 ++++++++++++++++++++++++------- man/gfrance.Rd | 20 +++++++++++++++++--- man/gfrance85.Rd | 5 ++++- man/thinnedSpatialPoly.Rd |only 8 files changed, 62 insertions(+), 21 deletions(-)
Author: Timothy H. Keitt
Diff between rgdal versions 0.6-21 dated 2009-11-11 and 0.6-22 dated 2009-12-03
Title: Bindings for the Geospatial Data Abstraction Library
Description: Provides bindings to Frank Warmerdam's Geospatial Data
Abstraction Library (GDAL) (>= 1.3.1) and access to
projection/transformation operations from the PROJ.4 library.
The GDAL and PROJ.4 libraries are external to the package, and,
when installing the package from source, must be correctly
installed first. Both GDAL raster and OGR vector map data can
be imported into R, and GDAL raster data and OGR vector data
exported. Use is made of classes defined in the sp package.
ChangeLog | 7 ++++++-
DESCRIPTION | 8 ++++----
R/sp_gdal.R | 24 +++++++++++++++++++++---
inst/ChangeLog | 7 ++++++-
src/gdal-bindings.cpp | 28 ++++++++++++++++++++++++++++
5 files changed, 65 insertions(+), 9 deletions(-)
Author: Emmanuel Paradis
Title: Population and Evolutionary Genetics Analysis System
Description: pegas provides functions for reading, writing, plotting,
analysing, and manipulating allelic and haplotypic data, and
for the analysis of population nucleotide sequences including
coalescence analyses.
Diff between pegas versions 0.2 dated 2009-10-07 and 0.3 dated 2009-12-03
ChangeLog | 40 ++++++++++++++++++++++++++++++++++++++++ DESCRIPTION | 16 ++++++++-------- R/IO.R | 18 ++++++++++++++---- R/amova.R | 7 +++++-- R/conversion.R | 22 +++++++++++----------- R/haplotype.R | 28 ++++++++++++++++++++-------- R/heterozygosity.R | 4 ++-- R/summary.loci.R | 39 ++++++++++++++++++++++++++++++++++----- inst |only man/Fst.Rd | 17 +++++++++++++---- man/MMD.Rd | 4 ++-- man/R2.test.Rd | 10 +++++++--- man/amova.Rd | 15 ++++++++------- man/bind.loci.Rd |only man/conversion.Rd | 37 +++++++++++++++++++++++++++---------- man/edit.loci.Rd |only man/haploNet.Rd | 38 ++++++++++++++++++++++++++++---------- man/haplotype.Rd | 25 +++++++++++++++++++------ man/heterozygosity.Rd | 19 ++++++++++++++----- man/hw.test.Rd | 12 ++++++++---- man/nuc.div.Rd | 6 +++--- man/pegas-package.Rd | 4 ++-- man/read.gtx.Rd | 9 +++++---- man/read.loci.Rd | 37 ++++++++++++++++++++++++------------- man/site.spectrum.Rd | 29 ++++++++++++++--------------- man/summary.loci.Rd | 14 ++++++++------ man/tajima.test.Rd | 2 +- man/theta.h.Rd | 13 +++++++++++-- man/theta.k.Rd | 16 ++++++++++++---- man/theta.s.Rd | 6 +++--- man/theta.tree.Rd | 9 +++++++++ man/utilities.Rd | 7 ++++++- man/write.loci.Rd | 9 ++++----- 33 files changed, 362 insertions(+), 150 deletions(-)
Author: Andrew Gelman
Diff between mi versions 0.08-04.02 dated 2009-10-01 and 0.08-04.04 dated 2009-12-03
Title: Missing Data Imputation and Model Checking
Description: Missing-data imputation and model checking
CHANGELOG | 9 ++++++
DESCRIPTION | 10 ++-----
R/AllInternal.R | 76 +++++++++++++++++++++++++++---------------------------
R/mi.binary.R | 15 +++++-----
R/mi.continuous.R | 16 +++++------
R/mi.count.R | 15 ++++------
6 files changed, 74 insertions(+), 67 deletions(-)
Author: Nicholas J. Lewin-Koh and Roger Bivand, contributions by Edzer
J. Pebesma, Eric Archer, Adrian Baddeley, Hans-Jörg Bibiko,
Stéphane Dray, David Forrest, Michael Friendly, Patrick
Giraudoux, Duncan Golicher, Virgilio Gómez Rubio, Patrick
Hausmann, Thomas Jagger, Sebastian P. Luque, Don MacQueen,
Andrew Niccolai, Tom Short and Ben Stabler
Title: Tools for reading and handling spatial objects
Description: Set of tools for manipulating and reading geographic data,
in particular ESRI shapefiles; C code used from shapelib. It
includes binary access to GSHHS shoreline files. The package
also provides interface wrappers for exchanging spatial objects
with packages such as PBSmapping, spatstat, maps, RArcInfo,
Stata tmap, WinBUGS, Mondrian, and others.
Diff between maptools versions 0.7-26 dated 2009-09-18 and 0.7-28 dated 2009-12-03
maptools-0.7-26/maptools/man/Map2poly.Rd |only maptools-0.7-26/maptools/man/get.Pcent.Rd |only maptools-0.7-26/maptools/man/maptools.Rd |only maptools-0.7-26/maptools/man/plot.Map.Rd |only maptools-0.7-26/maptools/man/plot.polylist.Rd |only maptools-0.7-26/maptools/man/read.shape.Rd |only maptools-0.7-26/maptools/man/spChFIDs-methods.Rd |only maptools-0.7-26/maptools/man/subset.polylist.Rd |only maptools-0.7-26/maptools/man/write.linelistShape.Rd |only maptools-0.7-26/maptools/man/write.pointShape.Rd |only maptools-0.7-26/maptools/man/write.polylistShape.Rd |only maptools-0.7-28/maptools/ChangeLog | 51 +++++++++++++++++++- maptools-0.7-28/maptools/DESCRIPTION | 18 +++---- maptools-0.7-28/maptools/INDEX | 16 +----- maptools-0.7-28/maptools/NAMESPACE | 23 +++++---- maptools-0.7-28/maptools/R/DP.R |only maptools-0.7-28/maptools/R/dotsinpolys.R | 4 - maptools-0.7-28/maptools/R/sp_bind.R | 49 ------------------- maptools-0.7-28/maptools/data/gpcholes.rda |binary maptools-0.7-28/maptools/inst/ChangeLog | 51 +++++++++++++++++++- maptools-0.7-28/maptools/inst/old_man |only maptools-0.7-28/maptools/man/dotsInPolys.Rd | 12 ---- maptools-0.7-28/maptools/man/getinfo.shape.Rd |only maptools-0.7-28/maptools/man/holepolys.Rd | 6 +- maptools-0.7-28/maptools/man/leglabs.Rd |only maptools-0.7-28/maptools/man/readShapeLines.Rd | 2 maptools-0.7-28/maptools/man/readShapePoints.Rd | 2 maptools-0.7-28/maptools/man/readShapePoly.Rd | 2 maptools-0.7-28/maptools/man/readShapeSpatial.Rd | 6 +- maptools-0.7-28/maptools/man/spCbind-methods.Rd | 2 maptools-0.7-28/maptools/man/spRbind-methods.Rd | 2 maptools-0.7-28/maptools/man/symbolsInPolys.Rd | 9 --- maptools-0.7-28/maptools/man/thinnedSpatialPoly.Rd |only 33 files changed, 142 insertions(+), 113 deletions(-)
Author: Original by Jay L. Devore, modifications by Douglas Bates
Diff between Devore7 versions 0.7.2 dated 2009-10-13 and 0.7.3 dated 2009-12-03
Title: Data sets from Devore's "Prob and Stat for Eng (7th ed)"
Description: Data sets and sample analyses from Jay L. Devore (2008),
"Probability and Statistics for Engineering and the Sciences
(7th ed)", Thomson.
DESCRIPTION | 7
NEWS |only
data/ex08.57.R | 2
inst/doc/Devore7.pdf | 3053 +++++++++++++++++++++++++--------------------------
4 files changed, 1542 insertions(+), 1520 deletions(-)