Author: Jeff Gentry
Diff between twitteR versions 0.1.3 dated 2009-11-13 and 0.1.5 dated 2009-12-14
Title: R based Twitter client
Description: Provides an interface to the Twitter web API
DESCRIPTION | 6 +++---
R/dm.R | 21 +++++++++++----------
R/search.R | 8 ++++----
R/session.R | 9 +++++++--
R/status.R | 16 ++++++++--------
R/timeline.R | 16 ++++++++--------
R/users.R | 12 ++++++------
inst/doc/twitteR.pdf |binary
man/Rtweets.Rd | 3 ++-
man/dm.Rd | 10 ++++++----
man/getUser.Rd | 7 ++++---
man/publicTimeline.Rd | 9 +++++----
man/search.Rd | 3 ++-
man/updateStatus.Rd | 7 ++++---
14 files changed, 70 insertions(+), 57 deletions(-)
Author: Edzer Pebesma
Diff between sp versions 0.9-51 dated 2009-12-07 and 0.9-52 dated 2009-12-14
Title: classes and methods for spatial data
Description: A package that provides classes and methods for spatial
data. The classes document where the spatial location
information resides, for 2D or 3D data. Utility functions are
provided, e.g. for plotting data as maps, spatial selection, as
well as methods for retrieving coordinates, for subsetting,
print, summary, etc.
.Rbuildindex.19095 |only
DESCRIPTION | 10
NAMESPACE | 2
R/spdists.R | 25
inst/doc/sp.pdf | 3646 ++++++++++++++++++++++++------------------------
man/spDistsN1.Rd | 10
rlabs |only
tests/spDists.R |only
tests/spDists.Rout.save |only
9 files changed, 1862 insertions(+), 1831 deletions(-)
Author: Spencer Graves, Sundar Dorai-Raj, and Romain Francois
Title: sos
Description: R related Search Engines
Diff between sos versions 1.1-7 dated 2009-11-03 and 1.2-2 dated 2009-12-14
sos-1.1-7/sos/inst/doc/RSiteSearch.bbl |only sos-1.1-7/sos/inst/doc/RSiteSearch.blg |only sos-1.1-7/sos/inst/doc/RSiteSearch.pdf |only sos-1.1-7/sos/inst/doc/RSiteSearch.tex |only sos-1.1-7/sos/inst/doc/RSiteSearch_body.tex |only sos-1.1-7/sos/inst/doc/sos.tex |only sos-1.1-7/sos/inst/doc/sosbib.bib |only sos-1.2-2/sos/DESCRIPTION | 8 sos-1.2-2/sos/R/findFn.R | 29 - sos-1.2-2/sos/R/summary.findFn.R | 17 sos-1.2-2/sos/R/writeFindFn2xls.R | 109 +++-- sos-1.2-2/sos/inst/doc/RJournal.sty | 1 sos-1.2-2/sos/inst/doc/sos.Rnw | 531 +++++++++++++++++++++++++++- sos-1.2-2/sos/inst/doc/sos.pdf |binary 14 files changed, 625 insertions(+), 70 deletions(-)
Author: Yu-Sung Su
Diff between R2jags versions 0.01-27 dated 2009-11-12 and 0.01-28 dated 2009-12-14
Title: A Package for Running jags from R
Description: Using this package to call jags from R.
CHANGELOG | 4 ++++
DESCRIPTION | 8 ++++----
R/autojags.R | 6 +++---
3 files changed, 11 insertions(+), 7 deletions(-)
Author: Jouni Helske
Diff between KFAS versions 0.4.7 dated 2009-11-11 and 0.4.8 dated 2009-12-14
Title: Multivariate Kalman filter and smoother, simulation smoother and
forecasting of state space models. State smoothing and
approximate likelihood of exponential family state space
models.
Description: Package KFAS provides functions for fast Kalman filtering,
state and disturbance smoothing, forecasting and simulation of
multivariate time-variant state space models. All functions can
use exact diffuse initialisation when distributions of some or
all elements of initial state vector are unknown. Filtering,
state smoothing and simulation functions use sequential
processing algorithm, which is faster than standard approach,
and it also allows singularity of prediction error variance
matrix. KFAS also contains function for likelihood of
exponential family state space models and function for state
smoothing of exponential family state space models.
KFAS-0.4.7/KFAS/man/expflik.Rd |only
KFAS-0.4.7/KFAS/man/expfsmoother.Rd |only
KFAS-0.4.8/KFAS/DESCRIPTION | 15 +--
KFAS-0.4.8/KFAS/NAMESPACE | 2
KFAS-0.4.8/KFAS/R/KFAS.R | 161 ++++++++++++++++++++++++++++++++++--
KFAS-0.4.8/KFAS/man/eflik.Rd |only
KFAS-0.4.8/KFAS/man/eflik0.Rd |only
KFAS-0.4.8/KFAS/man/efsmoother.Rd |only
KFAS-0.4.8/KFAS/src/eflik.f90 |only
9 files changed, 163 insertions(+), 15 deletions(-)
Author: Tao Huang
Title: Construct time delay gene regulatory network
Description: GeneReg is an R package for inferring time delay gene
regulatory network using time course gene expression profiles.
The main idea of time delay linear model is to fit a linear
regression model using a set of putative regulators to estimate
the transcription pattern of a specific target gene.
Diff between GeneReg versions 1.1.0 dated 2009-09-08 and 1.1.1 dated 2009-12-14
DESCRIPTION | 8 ++++---- R/plot.R | 3 +-- R/timedelay.lm.R | 2 +- man/GeneReg-package.Rd | 24 ++++++++++++++++-------- man/timedelay.lm.Rd | 6 +++--- man/timedelay.lm.batch.Rd | 3 ++- man/timedelay.univariate.lm.Rd | 5 +++-- man/ts.bspline.Rd | 2 +- 8 files changed, 31 insertions(+), 22 deletions(-)
Author: Romain Francois
Title: bibtex parser
Description: Utility to parse a bibtex file
Diff between bibtex versions 0.1-2 dated 2009-12-13 and 0.1-3 dated 2009-12-14
DESCRIPTION | 8 ++++---- R/bibtex.R | 2 +- man/bibtex-package.Rd | 4 ++-- 3 files changed, 7 insertions(+), 7 deletions(-)
Author: Achim Zeileis [aut, cre], Francisco Cribari-Neto [ctb],
Alexandre B. Simas [ctb] (earlier version by), Andrea V. Rocha
[ctb] (earlier version by)
Title: Beta Regression
Description: Beta regression for modeling beta-distributed dependent
variables, e.g., rates and proportions.
Diff between betareg versions 2.0-0 dated 2009-09-03 and 2.1-2 dated 2009-12-14
DESCRIPTION | 24 +- NAMESPACE | 2 NEWS | 34 +++ R/betareg.R | 466 ++++++++++++++++++++++++++++++++++------------- R/leverage.R | 38 ++- R/plot.betareg.R | 47 +++- data/MockJurors.rda |only data/ReadingSkills.rda |only data/StressAnxiety.rda |only demo |only inst/CITATION | 13 - inst/doc |only man/FoodExpenditure.Rd | 2 man/GasolineYield.Rd | 19 + man/MockJurors.Rd |only man/ReadingSkills.Rd |only man/StressAnxiety.Rd |only man/betareg.Rd | 117 ++++++++--- man/betareg.control.Rd | 4 man/gleverage.Rd | 8 man/plot.betareg.Rd | 7 man/predict.betareg.Rd | 14 - man/residuals.betareg.Rd | 5 man/summary.betareg.Rd | 36 ++- 24 files changed, 600 insertions(+), 236 deletions(-)
Author: Evgenia Dimitriadou, Kurt Hornik, Friedrich Leisch, David
Meyer, and Andreas Weingessel
Title: Misc Functions of the Department of Statistics (e1071), TU Wien
Description: Functions for latent class analysis, short time Fourier
transform, fuzzy clustering, support vector machines, shortest
path computation, bagged clustering, naive Bayes classifier,
...
Diff between e1071 versions 1.5-21 dated 2009-11-11 and 1.5-22 dated 2009-12-14
e1071-1.5-21/e1071/NEWS |only e1071-1.5-21/e1071/inst/doc/svmdoc.pdf.2.r3331 |only e1071-1.5-21/e1071/inst/doc/svmdoc.pdf.r3159 |only e1071-1.5-21/e1071/inst/doc/svmdoc.pdf.r3191 |only e1071-1.5-21/e1071/inst/doc/svmdoc.pdf.r3290 |only e1071-1.5-21/e1071/inst/doc/svmdoc.pdf.r3331 |only e1071-1.5-21/e1071/inst/doc/svmdoc.pdf.r3354 |only e1071-1.5-21/e1071/inst/doc/svmdoc.pdf.r3745 |only e1071-1.5-21/e1071/inst/doc/svmdoc.pdf.r3767 |only e1071-1.5-22/e1071/DESCRIPTION | 10 +- e1071-1.5-22/e1071/R/sparse.R | 101 +++++++------------------ e1071-1.5-22/e1071/R/svm.R | 9 ++ e1071-1.5-22/e1071/inst/NEWS |only e1071-1.5-22/e1071/inst/doc/svmdoc.pdf |binary e1071-1.5-22/e1071/man/svm.Rd | 4 15 files changed, 46 insertions(+), 78 deletions(-)
Author: Felix Kaminsky
Diff between estout versions 0.9-1 dated 2009-12-09 and 1.0-1 dated 2009-12-14
Title: Estimates Output
Description: This package is intended to speedup the process of
creating model-comparing tables common in Macroeconomics. The
function collection stores the estimates of several models and
formats it to a table of the form estimate starred and std.err.
below. The default output is LaTeX but output to CSV for later
editing in a spreadsheet tool is possible as well. It works for
linear models (lm) and panel models from the "plm"-package
(plm). Two further implemented functions "descsto" and
"desctab" enable you to export descriptive statistics of
data-frames and single variables to LaTeX and CSV.
DESCRIPTION | 26 ++++++++++++++------------
R/descsto.R | 51 +++++++++++++++++++++++++++++++++++++++++----------
R/desctab.R | 56 +++++++++++++++++++++++++++++++++++++++-----------------
R/esttab.R | 43 +++++++++++++++++++++++--------------------
man/descsto.Rd | 3 ++-
man/desctab.Rd | 5 ++++-
man/esttab.Rd | 5 ++---
7 files changed, 125 insertions(+), 64 deletions(-)
Author: Tobias Sing, Oliver Sander, Niko Beerenwinkel, Thomas Lengauer
Title: Visualizing the performance of scoring classifiers.
Description: ROC graphs, sensitivity/specificity curves, lift charts,
and precision/recall plots are popular examples of trade-off
visualizations for specific pairs of performance measures. ROCR
is a flexible tool for creating cutoff-parametrized 2D
performance curves by freely combining two from over 25
performance measures (new performance measures can be added
using a standard interface). Curves from different
cross-validation or bootstrapping runs can be averaged by
different methods, and standard deviations, standard errors or
box plots can be used to visualize the variability across the
runs. The parametrization can be visualized by printing cutoff
values at the corresponding curve positions, or by coloring the
curve according to cutoff. All components of a performance plot
can be quickly adjusted using a flexible parameter dispatching
mechanism. Despite its flexibility, ROCR is easy to use, with
only three commands and reasonable default values for all
optional parameters.
Diff between ROCR versions 1.0-3 dated 2009-10-28 and 1.0-4 dated 2009-12-14
DESCRIPTION | 8 ++++---- INSTALL | 2 +- NEWS | 7 +++++++ R/zzz.R | 18 ++++++++++++++++-- man/plot-methods.Rd | 2 +- 5 files changed, 29 insertions(+), 8 deletions(-)