Wed, 23 Dec 2009

Package WriteXLS updated to version 1.8.4 with previous version 1.8.3 dated 2009-11-06

Author: Marc Schwartz

Maintainer: Marc Schwartz
Title: Cross-platform Perl based R function to create Excel 2003 (XLS) files
Description: Cross-platform perl based R function to create Excel (XLS) files from one or more data frames. Each data frame will be written to a separate named worksheet in the Excel spreadsheet. The worksheet name will be the name of the data frame it contains or can be specified by the user.

Diff between WriteXLS versions 1.8.3 dated 2009-11-06 and 1.8.4 dated 2009-12-23

 DESCRIPTION  |   10 +++++-----
 R/WriteXLS.R |    8 ++++----
 2 files changed, 9 insertions(+), 9 deletions(-)

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Package tkrgl updated to version 0.6.2 with previous version 0.6.1 dated 2009-01-26

Author: Duncan Murdoch/Ming Chen

Maintainer: Duncan Murdoch
Title: TK widget tools for rgl package
Description: TK widget tools for rgl package

Diff between tkrgl versions 0.6.1 dated 2009-01-26 and 0.6.2 dated 2009-12-23

 DESCRIPTION |   27 ++++++++++++++++-----------
 NAMESPACE   |only
 2 files changed, 16 insertions(+), 11 deletions(-)

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New package WMBrukerParser with initial version 1.1
Package: WMBrukerParser
Type: Package
Title: William and Mary Parser For Bruker-Ultraflex Mass Spec Data
Version: 1.1
Date: 2009-12-22
Author: William Cooke, Maureen Tracy and Dariya Malyarenko
Maintainer: William Cooke
Description: The package parses Bruker Ultraflex TOF mass spectrometry data and experimental parameter files into R structures for further signal processing and statistical analysis.
License: GPL (>= 2)
LazyLoad: yes
Packaged: 2009-12-23 01:32:25 UTC; Maureen Tracy
Repository: CRAN
Date/Publication: 2009-12-23 08:28:09

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Package slam updated to version 0.1-8 with previous version 0.1-7 dated 2009-12-22

Author: Kurt Hornik, David Meyer, Christian Buchta

Maintainer: David Meyer
Title: Sparse Lightweight Arrays and Matrices
Description: Data structures and algorithms for sparse arrays and matrices, based on index arrays and simple triplet representations, respectively.

Diff between slam versions 0.1-7 dated 2009-12-22 and 0.1-8 dated 2009-12-23

 DESCRIPTION       |    8 ++++----
 NAMESPACE         |   24 ++++++++++++------------
 R/array.R         |    2 +-
 R/stm.R           |   48 ++++++++++++++++++++++++------------------------
 man/sums.Rd       |   40 ++++++++++++++++++++--------------------
 tests/stm.R       |   26 +++++++++++++-------------
 tests/stm_zeros.R |   28 ++++++++++++++--------------
 7 files changed, 88 insertions(+), 88 deletions(-)

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Package relations updated to version 0.5-5 with previous version 0.5-4 dated 2009-08-31

Author: Kurt Hornik and David Meyer

Maintainer: Kurt Hornik
Title: Data Structures and Algorithms for Relations
Description: Data structures and algorithms for k-ary relations with arbitrary domains, featuring relational algebra, predicate functions, and fitters for consensus relations.

Diff between relations versions 0.5-4 dated 2009-08-31 and 0.5-5 dated 2009-12-23

 relations-0.5-4/relations/R/multiset.R           |only
 relations-0.5-5/relations/DESCRIPTION            |   10 
 relations-0.5-5/relations/NAMESPACE              |   14 
 relations-0.5-5/relations/NEWS                   |   16 +
 relations-0.5-5/relations/R/algebra.R            |   11 
 relations-0.5-5/relations/R/charfun.R            |    3 
 relations-0.5-5/relations/R/choice.R             |   59 +++
 relations-0.5-5/relations/R/consensus.R          |  100 ++++--
 relations-0.5-5/relations/R/container.R          |    7 
 relations-0.5-5/relations/R/data.R               |    4 
 relations-0.5-5/relations/R/dissimilarity.R      |   66 +++-
 relations-0.5-5/relations/R/domain.R             |   29 -
 relations-0.5-5/relations/R/dual.R               |   33 +-
 relations-0.5-5/relations/R/ensemble.R           |   24 +
 relations-0.5-5/relations/R/getters.R            |   16 -
 relations-0.5-5/relations/R/graph.R              |   37 +-
 relations-0.5-5/relations/R/impute.R             |only
 relations-0.5-5/relations/R/incidence.R          |   12 
 relations-0.5-5/relations/R/lsap.R               |    2 
 relations-0.5-5/relations/R/mip.R                |   20 -
 relations-0.5-5/relations/R/operators.R          |   34 +-
 relations-0.5-5/relations/R/pclust.R             |   18 -
 relations-0.5-5/relations/R/plot.R               |   13 
 relations-0.5-5/relations/R/predicates.R         |  354 +++++++++++++++--------
 relations-0.5-5/relations/R/ranking.R            |   21 -
 relations-0.5-5/relations/R/relation.R           |   52 +--
 relations-0.5-5/relations/R/table.R              |    3 
 relations-0.5-5/relations/R/utilities.R          |   21 +
 relations-0.5-5/relations/R/violations.R         |  173 ++++++-----
 relations-0.5-5/relations/inst/NEWS              |   16 +
 relations-0.5-5/relations/inst/doc/relations.pdf |binary
 relations-0.5-5/relations/man/Felines.Rd         |    6 
 relations-0.5-5/relations/man/algebra.Rd         |   12 
 relations-0.5-5/relations/man/choice.Rd          |   30 +
 relations-0.5-5/relations/man/consensus.Rd       |   15 
 relations-0.5-5/relations/man/dissimilarity.Rd   |   28 +
 relations-0.5-5/relations/man/impute.Rd          |only
 relations-0.5-5/relations/man/predicates.Rd      |   68 ++--
 relations-0.5-5/relations/man/violations.Rd      |    6 
 39 files changed, 868 insertions(+), 465 deletions(-)

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Package Rcmdr updated to version 1.5-4 with previous version 1.5-3 dated 2009-10-05

Author: John Fox , with contributions from Liviu Andronic, Michael Ash, Theophilius Boye, Stefano Calza, Andy Chang, Philippe Grosjean, Richard Heiberger, G. Jay Kerns, Renaud Lancelot, Matthieu Lesnoff, Uwe Ligges, Samir Messad, Martin Maechler, Robert Muenchen, Duncan Murdoch, Erich Neuwirth, Dan Putler, Brian Ripley, Miroslav Ristic, and Peter Wolf.

Maintainer: John Fox
Title: R Commander
Description: A platform-independent basic-statistics GUI (graphical user interface) for R, based on the tcltk package.

Diff between Rcmdr versions 1.5-3 dated 2009-10-05 and 1.5-4 dated 2009-12-23

 DESCRIPTION               |   23 
 NAMESPACE                 |    4 
 R/commander.R             |    4 
 R/statistics-means-menu.R |    5 
 R/utilities.R             | 3075 +++++++++++++++++++++++-----------------------
 inst/CHANGES              |   12 
 man/Rcmdr-package.Rd      |    4 
 man/Rcmdr.Utilities.Rd    |    7 
 man/Recode.Rd             |    4 
 man/rcorr.adjust.Rd       |    8 
 man/scatter3d.Rd          |    4 
 11 files changed, 1620 insertions(+), 1530 deletions(-)

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Package ProfessR updated to version 1.1-1 with previous version 1.1-0 dated 2009-12-13

Author: Jonathan M. Lees

Maintainer: Jonathan M. Lees
Title: Grades Setting and Exam Maker
Description: Programs to determine student grades and create examinations from Question banks. Programs will create numerous multiple choice exams, randomly shuffled, for different versions of same question list.

Diff between ProfessR versions 1.1-0 dated 2009-12-13 and 1.1-1 dated 2009-12-23

 ProfessR-1.1-0/ProfessR/R/UNCketron.R           |only
 ProfessR-1.1-1/ProfessR/DESCRIPTION             |    6 +--
 ProfessR-1.1-1/ProfessR/R/UNCkeytron.R          |only
 ProfessR-1.1-1/ProfessR/R/droplowest.R          |only
 ProfessR-1.1-1/ProfessR/R/prep.exam.R           |    4 +-
 ProfessR-1.1-1/ProfessR/R/repair.id.R           |   47 +++++++++++++++---------
 ProfessR-1.1-1/ProfessR/inst/doc/ExamMaker.pdf  |binary
 ProfessR-1.1-1/ProfessR/inst/doc/Grader.pdf     |binary
 ProfessR-1.1-1/ProfessR/man/DUMPbank.Rd         |    4 +-
 ProfessR-1.1-1/ProfessR/man/DUMPgrades.Rd       |    5 ++
 ProfessR-1.1-1/ProfessR/man/ProfessR-package.Rd |    2 -
 ProfessR-1.1-1/ProfessR/man/autoemail.Rd        |    2 -
 ProfessR-1.1-1/ProfessR/man/do.grades.Rd        |    7 ++-
 ProfessR-1.1-1/ProfessR/man/droplowest.Rd       |only
 ProfessR-1.1-1/ProfessR/man/make.exam.Rd        |    5 ++
 ProfessR-1.1-1/ProfessR/man/make.solution.Rd    |    4 +-
 ProfessR-1.1-1/ProfessR/man/prep.exam.Rd        |   14 +++++--
 ProfessR-1.1-1/ProfessR/man/seebank.Rd          |    6 ++-
 ProfessR-1.1-1/ProfessR/man/version.exam.Rd     |   13 ++----
 19 files changed, 77 insertions(+), 42 deletions(-)

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Package mmcm updated to version 1.1-0 with previous version 1.0-1 dated 2009-06-14

Author: Kengo NAGASHIMA and Yasunori SATO

Maintainer: Kengo NAGASHIMA
Title: Modified Maximum Contrast Method
Description: This package provides an implementation of a modified maximum contrast method and the maximum contrast method. This version supports functions mmcm.mvt, mcm.mvt that gives P-value by using the quasi-Monte Carlo method, and mmcm.resamp that gives P-value by using the permutation method.

Diff between mmcm versions 1.0-1 dated 2009-06-14 and 1.1-0 dated 2009-12-23

 mmcm-1.0-1/mmcm/R/print.mmcm.resamp.R    |only
 mmcm-1.0-1/mmcm/man/print.mmcm.resamp.Rd |only
 mmcm-1.1-0/mmcm/DESCRIPTION              |   18 +++---
 mmcm-1.1-0/mmcm/NAMESPACE                |    4 +
 mmcm-1.1-0/mmcm/NEWS                     |    1 
 mmcm-1.1-0/mmcm/R/mcm.mvt.R              |only
 mmcm-1.1-0/mmcm/R/mmcm.mvt.R             |only
 mmcm-1.1-0/mmcm/R/mmcm.resamp.R          |   16 +++---
 mmcm-1.1-0/mmcm/R/print.mmcm.res.R       |only
 mmcm-1.1-0/mmcm/man/mcm.mvt.Rd           |only
 mmcm-1.1-0/mmcm/man/mmcm.Rd              |   21 +++-----
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 mmcm-1.1-0/mmcm/man/mmcm.resamp.Rd       |   81 +++++++++++++++----------------
 mmcm-1.1-0/mmcm/man/print.mmcm.res.Rd    |only
 14 files changed, 71 insertions(+), 70 deletions(-)

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Package mi updated to version 0.08-05 with previous version 0.08-04.07 dated 2009-12-20

Author: Andrew Gelman , Jennifer Hill , Masanao Yajima , Yu-Sung Su , Maria Grazia Pittau

Maintainer: Yu-Sung Su
Title: Missing Data Imputation and Model Checking
Description: Missing-data imputation and model checking

Diff between mi versions 0.08-04.07 dated 2009-12-20 and 0.08-05 dated 2009-12-23

 CHANGELOG        |   11 +++--
 DESCRIPTION      |    8 +--
 R/AllInternal.R  |    4 -
 R/mi.R           |  117 +++++++++++++++++++++++--------------------------------
 R/mi.completed.R |   21 +++++----
 R/mi.polr.R      |   14 +++---
 man/mi.Rd        |    9 ++--
 7 files changed, 86 insertions(+), 98 deletions(-)

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Package heplots updated to version 0.8-11 with previous version 0.8-10 dated 2009-10-13

Author: John Fox, Michael Friendly, and Georges Monette

Maintainer: Michael Friendly
Title: Visualizing Tests in Multivariate Linear Models
Description: Functions for visualizing hypothesis tests in multivariate linear models. They represents sums-of-squares-and-products matrices for linear hypotheses and for error using ellipses (in two dimensions) and ellipsoids (in three dimensions).

Diff between heplots versions 0.8-10 dated 2009-10-13 and 0.8-11 dated 2009-12-23

 DESCRIPTION           |   17 +++++++++--------
 NAMESPACE             |    4 ++--
 R/heplot1d.R          |    7 +++++--
 R/mark.H0.R           |only
 data/WeightLoss.RData |only
 demo/OBK.R            |   37 +++++++++++++++++++------------------
 inst/CHANGES          |    8 ++++++++
 man/RootStock.Rd      |    7 +++++++
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 man/mark.H0.Rd        |only
 11 files changed, 60 insertions(+), 35 deletions(-)

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Package forecast updated to version 2.02 with previous version 2.01 dated 2009-09-18

Author: Rob J Hyndman

Maintainer: Rob J Hyndman
Title: Forecasting functions for time series
Description: Methods and tools for displaying and analysing univariate time series forecasts including exponential smoothing via state space models and automatic ARIMA modelling.

Diff between forecast versions 2.01 dated 2009-09-18 and 2.02 dated 2009-12-23

 ChangeLog           |    3 +++
 DESCRIPTION         |    8 ++++----
 R/arima.R           |    2 +-
 man/ets.Rd          |    2 +-
 man/forecastplot.Rd |    2 +-
 man/gold.Rd         |    2 +-
 man/logLikets.Rd    |    2 +-
 man/seasonplot.Rd   |    2 +-
 man/spline.f.Rd     |    2 +-
 man/ts.display.Rd   |    2 +-
 man/wineind.Rd      |    2 +-
 man/woolyrnq.Rd     |    2 +-
 12 files changed, 17 insertions(+), 14 deletions(-)

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Package Deducer updated to version 0.2-2 with previous version 0.2-1 dated 2009-12-02

Author: Ian Fellows

Maintainer: Ian Fellows
Title: Deducer
Description: An intuitive, cross-platform graphical data analysis system. It uses menus and dialogs to guide the user efficiently through the data manipulation and analysis process, and has an excel like spreadsheet for easy data frame visualization and editing. Deducer works best when used with the Java based R GUI JGR, but the dialogs can be called from the command line. Dialogs have also been integrated into the Windows Rgui.

Diff between Deducer versions 0.2-1 dated 2009-12-02 and 0.2-2 dated 2009-12-23

 DESCRIPTION                       |    4 +--
 NEWS                              |    6 +++++
 R/ggcorplot.R                     |   43 ++++++++++++++++++--------------------
 R/recode.variables.R              |    6 ++---
 inst/java/deducer.jar             |binary
 inst/javasrc/deducer/Deducer.java |    2 -
 man/ggcorplot.Rd                  |   21 +++++++++++++++++-
 7 files changed, 53 insertions(+), 29 deletions(-)

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Package ConvergenceConcepts updated to version 0.8 with previous version 0.6 dated 2009-02-03

Author: P. Lafaye de Micheaux , B. Liquet .

Maintainer: P. Lafaye de Micheaux
Title: Seeing convergence concepts in action
Description: This package provides a way to investigate various modes of convergence of random variables.

Diff between ConvergenceConcepts versions 0.6 dated 2009-02-03 and 0.8 dated 2009-12-23

 DESCRIPTION     |   23 ++++++++++++++---------
 R/investigate.R |   45 ++++++++++++++++++++++++++++++++++-----------
 R/law-plot2d.R  |    6 +++---
 inst/CITATION   |   19 ++++++++++++-------
 inst/HISTORY    |   14 ++++++++++++++
 5 files changed, 77 insertions(+), 30 deletions(-)

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