Title: Bindings for the Geospatial Data Abstraction Library
Diff between rgdal versions 0.6-23 dated 2009-12-07 and 0.6-24 dated 2010-01-03
Description: Provides bindings to Frank Warmerdam's Geospatial Data
Abstraction Library (GDAL) (>= 1.3.1) and access to
projection/transformation operations from the PROJ.4 library.
The GDAL and PROJ.4 libraries are external to the package, and,
when installing the package from source, must be correctly
installed first. Both GDAL raster and OGR vector map data can
be imported into R, and GDAL raster data and OGR vector data
exported. Use is made of classes defined in the sp package.
Author: Timothy H. Keitt
Maintainer: Roger Bivand
ChangeLog | 7 ++++++-
DESCRIPTION | 8 ++++----
R/ogr_write.R | 3 +++
inst/ChangeLog | 7 ++++++-
4 files changed, 19 insertions(+), 6 deletions(-)
Title: Mixture of methods including mixtures
Diff between mixAK versions 0.5 dated 2009-08-13 and 0.6 dated 2010-01-03
Description: This package contains a mixture of statistical methods
including the MCMC methods to analyze normal mixtures
Author: Arnost Komarek
Maintainer: Arnost Komarek
mixAK-0.5/mixAK/R/GLMM_longitClust.R |only
mixAK-0.5/mixAK/R/NMixClust.R |only
mixAK-0.5/mixAK/man/GLMMlongitClust.Rd |only
mixAK-0.5/mixAK/man/NMixClust.Rd |only
mixAK-0.5/mixAK/src/GLMM_longitClust.cpp |only
mixAK-0.5/mixAK/src/GLMM_longitClust.h |only
mixAK-0.5/mixAK/src/GLMM_updateFixEf_gauss.cpp |only
mixAK-0.5/mixAK/src/GLMM_updateFixEf_gauss.h |only
mixAK-0.5/mixAK/src/GLMM_updateRanEf_nmix_gauss.cpp |only
mixAK-0.5/mixAK/src/GLMM_updateRanEf_nmix_gauss.h |only
mixAK-0.6/mixAK/CHANGES |only
mixAK-0.6/mixAK/DESCRIPTION | 10
mixAK-0.6/mixAK/R/GLMM_MCMC.R | 362 ++++---------
mixAK-0.6/mixAK/R/GLMM_MCMCdata.R | 18
mixAK-0.6/mixAK/R/GLMM_MCMCifit.R | 241 +++++----
mixAK-0.6/mixAK/R/GLMM_longitDA.R |only
mixAK-0.6/mixAK/R/NMixEM.R |only
mixAK-0.6/mixAK/R/NMixMCMCwrapper.R | 27 -
mixAK-0.6/mixAK/R/NMixPlugDA.R |only
mixAK-0.6/mixAK/R/NMixPseudoGOF.NMixMCMC.R |only
mixAK-0.6/mixAK/R/NMixPseudoGOF.R |only
mixAK-0.6/mixAK/R/NMixPseudoGOF.default.R |only
mixAK-0.6/mixAK/R/Y2T.NMixPlugCondDensJoint2.R |only
mixAK-0.6/mixAK/R/Y2T.NMixPlugCondDensMarg.R |only
mixAK-0.6/mixAK/R/Y2T.NMixPlugDensJoint2.R |only
mixAK-0.6/mixAK/R/Y2T.NMixPlugDensMarg.R |only
mixAK-0.6/mixAK/R/Y2T.NMixPredCDFMarg.R | 17
mixAK-0.6/mixAK/R/Y2T.NMixPredCondDensJoint2.R |only
mixAK-0.6/mixAK/R/Y2T.NMixPredCondDensMarg.R |only
mixAK-0.6/mixAK/R/Y2T.NMixPredDensJoint2.R |only
mixAK-0.6/mixAK/R/Y2T.NMixPredDensMarg.R | 43 +
mixAK-0.6/mixAK/R/Y2T.R | 2
mixAK-0.6/mixAK/R/plot.NMixPlugCondDensMarg.R | 4
mixAK-0.6/mixAK/R/plot.NMixPredCondDensJoint2.R | 108 ++--
mixAK-0.6/mixAK/R/plot.NMixPredCondDensMarg.R | 126 ++--
mixAK-0.6/mixAK/R/print.NMixEM.R |only
mixAK-0.6/mixAK/inst/CITATION | 8
mixAK-0.6/mixAK/inst/doc/Faithful.pdf |binary
mixAK-0.6/mixAK/inst/doc/Galaxy.pdf |binary
mixAK-0.6/mixAK/inst/doc/Tandmob.pdf |binary
mixAK-0.6/mixAK/inst/doc/index.html | 74 ++
mixAK-0.6/mixAK/man/Faithful.Rd | 2
mixAK-0.6/mixAK/man/GLMMMCMC.Rd | 183 +++++-
mixAK-0.6/mixAK/man/GLMMMCMCdata.Rd | 2
mixAK-0.6/mixAK/man/GLMMMCMCifit.Rd | 20
mixAK-0.6/mixAK/man/GLMMlongitDA.Rd |only
mixAK-0.6/mixAK/man/MVNmixture.Rd | 2
mixAK-0.6/mixAK/man/NMixEM.Rd |only
mixAK-0.6/mixAK/man/NMixMCMC.Rd | 139 ++++-
mixAK-0.6/mixAK/man/NMixPlugCondDensJoint2.Rd | 2
mixAK-0.6/mixAK/man/NMixPlugDA.Rd |only
mixAK-0.6/mixAK/man/NMixPlugDensMarg.Rd | 10
mixAK-0.6/mixAK/man/NMixPredCDFMarg.Rd | 2
mixAK-0.6/mixAK/man/NMixPredCondDensJoint2.Rd | 2
mixAK-0.6/mixAK/man/NMixPredDensJoint2.Rd | 2
mixAK-0.6/mixAK/man/NMixPredDensMarg.Rd | 2
mixAK-0.6/mixAK/man/NMixPseudoGOF.Rd |only
mixAK-0.6/mixAK/man/TandmobEmer.Rd | 2
mixAK-0.6/mixAK/man/Y2T.Rd | 46 +
mixAK-0.6/mixAK/man/plot.NMixPlugCondDensMarg.Rd | 3
mixAK-0.6/mixAK/man/plot.NMixPredCDFMarg.Rd | 2
mixAK-0.6/mixAK/man/plot.NMixPredCondDensMarg.Rd | 3
mixAK-0.6/mixAK/man/plot.NMixPredDensJoint2.Rd | 2
mixAK-0.6/mixAK/man/plot.NMixPredDensMarg.Rd | 2
mixAK-0.6/mixAK/src/AK_Basic.h | 57 ++
mixAK-0.6/mixAK/src/AK_Utils.cpp | 34 +
mixAK-0.6/mixAK/src/AK_Utils.h | 23
mixAK-0.6/mixAK/src/Dist_MVN.cpp | 104 +++
mixAK-0.6/mixAK/src/Dist_MVN.h | 80 ++-
mixAK-0.6/mixAK/src/GLMM.h | 10
mixAK-0.6/mixAK/src/GLMM_MCMC.cpp | 471 ++++++++++--------
mixAK-0.6/mixAK/src/GLMM_MCMC.h | 157 +++---
mixAK-0.6/mixAK/src/GLMM_create_SZitZiS.cpp |only
mixAK-0.6/mixAK/src/GLMM_create_SZitZiS.h |only
mixAK-0.6/mixAK/src/GLMM_create_SZitZiS_4longitDA.cpp |only
mixAK-0.6/mixAK/src/GLMM_create_SZitZiS_4longitDA.h |only
mixAK-0.6/mixAK/src/GLMM_create_XtX.cpp |only
mixAK-0.6/mixAK/src/GLMM_create_XtX.h |only
mixAK-0.6/mixAK/src/GLMM_create_ZiS.cpp | 12
mixAK-0.6/mixAK/src/GLMM_fitted_Bernoulli_Logit.cpp |only
mixAK-0.6/mixAK/src/GLMM_fitted_Bernoulli_Logit.h |only
mixAK-0.6/mixAK/src/GLMM_fitted_Poisson_Log.cpp |only
mixAK-0.6/mixAK/src/GLMM_fitted_Poisson_Log.h |only
mixAK-0.6/mixAK/src/GLMM_linear_predictors.cpp | 77 ++
mixAK-0.6/mixAK/src/GLMM_linear_predictors.h | 68 +-
mixAK-0.6/mixAK/src/GLMM_longitDA.cpp |only
mixAK-0.6/mixAK/src/GLMM_longitDA.h |only
mixAK-0.6/mixAK/src/GLMM_longitPred_nmix_gauss.cpp | 80 ++-
mixAK-0.6/mixAK/src/GLMM_longitPred_nmix_gauss.h | 61 +-
mixAK-0.6/mixAK/src/GLMM_updateFixEf.cpp |only
mixAK-0.6/mixAK/src/GLMM_updateFixEf.h |only
mixAK-0.6/mixAK/src/GLMM_updateRanEf.cpp |only
mixAK-0.6/mixAK/src/GLMM_updateRanEf.h |only
mixAK-0.6/mixAK/src/LogLik_Bernoulli_Logit.cpp |only
mixAK-0.6/mixAK/src/LogLik_Bernoulli_Logit.h |only
mixAK-0.6/mixAK/src/LogLik_Gauss_Identity.cpp |only
mixAK-0.6/mixAK/src/LogLik_Gauss_Identity.h |only
mixAK-0.6/mixAK/src/LogLik_Poisson_Log.cpp |only
mixAK-0.6/mixAK/src/LogLik_Poisson_Log.h |only
mixAK-0.6/mixAK/src/MCMC_Moments_NormalApprox.cpp |only
mixAK-0.6/mixAK/src/MCMC_Moments_NormalApprox.h |only
mixAK-0.6/mixAK/src/NMix.h | 4
mixAK-0.6/mixAK/src/NMix_MCMC.cpp | 104 +++
mixAK-0.6/mixAK/src/NMix_MCMC.h | 77 ++
mixAK-0.6/mixAK/src/NMix_updateAlloc.cpp | 17
mixAK-0.6/mixAK/src/NMix_updateAlloc.h | 21
mixAK-0.6/mixAK/src/NMix_updateMeansVars.cpp | 273 ++++++++++
mixAK-0.6/mixAK/src/NMix_updateMeansVars.h | 161 +++++-
108 files changed, 2392 insertions(+), 967 deletions(-)
Title: Bayesian Survival Regression with Flexible Error and Random
Effects Distributions
Diff between bayesSurv versions 0.6-1 dated 2008-12-06 and 0.6-2 dated 2010-01-03
Description: Later
Author: Arnost Komarek
Maintainer: Arnost Komarek
DESCRIPTION | 11 +++++++----
man/bayesBisurvreg.Rd | 2 +-
man/bayesHistogram.Rd | 2 +-
3 files changed, 9 insertions(+), 6 deletions(-)
Title: Spherical Wavelets and SW-based Spatially Adaptive Methods
Diff between SpherWave versions 1.1.0 dated 2007-07-29 and 1.2.0 dated 2010-01-03
Description: This package carries out spherical wavelet transform
developed by Li (1999) and Oh (1999), and implements wavelet
thresholding approaches proposed by Oh and Li (2004).
Author: Hee-Seok Oh
Maintainer: Donghoh Kim
DESCRIPTION | 31 ++++++++++++++++---------------
man/multi-levels.Rd | 2 +-
2 files changed, 17 insertions(+), 16 deletions(-)
Title: Recursive Partitioning
Diff between rpart versions 3.1-45 dated 2009-08-05 and 3.1-46 dated 2010-01-03
Description: Recursive partitioning and regression trees
Author: Terry M Therneau and Beth Atkinson
Maintainer: Brian Ripley
ChangeLog | 4 -
DESCRIPTION | 10 +-
inst/po/de/LC_MESSAGES/R-rpart.mo |binary
inst/po/de/LC_MESSAGES/rpart.mo |binary
man/plot.rpart.Rd | 4 -
man/residuals.rpart.Rd | 2
man/rpart.Rd | 2
man/rpart.control.Rd | 2
man/rpconvert.Rd | 2
man/snip.rpart.Rd | 2
man/xpred.rpart.Rd | 2
po/R-de.po | 6 -
po/de.po | 6 -
tests/Examples/rpart-Ex.Rout.save | 134 ++++++++++++--------------------------
14 files changed, 66 insertions(+), 110 deletions(-)
Title: Penalized Smoothing Splines
Diff between pspline versions 1.0-13 dated 2009-02-20 and 1.0-14 dated 2010-01-03
Description: Smoothing splines with penalties on order m derivatives.
Author: S original by Jim Ramsey
Maintainer: Brian Ripley
ChangeLog | 4 ++++
DESCRIPTION | 12 +++++++-----
man/smooth.Pspline.Rd | 2 +-
3 files changed, 12 insertions(+), 6 deletions(-)
Title: Estimation/multiple Imputation for Mixed Categorical and
Continuous Data
Diff between mix versions 1.0-7 dated 2009-06-14 and 1.0-8 dated 2010-01-03
Description: Estimation/multiple imputation programs for mixed
categorical and continuous data
Author: Original by Joseph L. Schafer
Maintainer: Brian Ripley
DESCRIPTION | 8 ++++----
man/imp.mix.Rd | 2 +-
2 files changed, 5 insertions(+), 5 deletions(-)
Title: Read Data Stored by Minitab, S, SAS, SPSS, Stata, Systat, dBase,
...
Diff between foreign versions 0.8-38 dated 2009-10-07 and 0.8-39 dated 2010-01-03
Description: Functions for reading and writing data stored by
statistical packages such as Minitab, S, SAS, SPSS, Stata,
Systat, ..., and for reading and writing .dbf (dBase) files.
Author: R-core members, Saikat DebRoy
Maintainer: R-core
ChangeLog | 17 +
DESCRIPTION | 9
R/read.dta.R | 7
inst/po/de/LC_MESSAGES/R-foreign.mo |binary
inst/po/de/LC_MESSAGES/foreign.mo |binary
inst/po/en@quot/LC_MESSAGES/R-foreign.mo |binary
inst/po/en@quot/LC_MESSAGES/foreign.mo |binary
inst/po/fr/LC_MESSAGES/R-foreign.mo |binary
inst/po/fr/LC_MESSAGES/foreign.mo |binary
man/read.dta.Rd | 8
man/read.spss.Rd | 2
man/write.dta.Rd | 11
po/R-de.po | 18 -
po/R-en@quot.po | 14
po/R-foreign.pot | 8
po/R-fr.po | 28 +
po/de.po | 55 +--
po/en@quot.po | 44 +-
po/foreign.pot | 36 +-
po/fr.po | 484 +++++++++++++++++++------------
tests/octave.Rout.save | 4
21 files changed, 448 insertions(+), 297 deletions(-)
Title: Models for Skewed Count Distributions Relevant to Networks
Diff between degreenet versions 1.0 dated 2008-01-16 and 1.1 dated 2010-01-03
Description: Likelihood-based inference for skewed count distributions
used in network modeling. "degreenet" is a part of the
"statnet" suite of packages for network analysis. For a list
of functions type: help(package='degreenet')
Author: Mark S. Handcock
Maintainer: Mark S. Handcock
DESCRIPTION | 19 +++--
LICENSE | 11 +-
R/bs.R | 10 ++
R/cmp.R |only
R/cmp.natural.R |only
R/degreenet.R | 156 ++++++++++++++++++++++++++++++++++++++---
R/ghermite.R | 10 ++
R/groupedmodels.R | 12 ++-
R/mands.R | 10 ++
R/poissonlognormal.R | 124 +++++++++++++++++++-------------
R/reedmolloy.R | 17 ++++
R/simdist.R | 18 ++++
R/simyule.R | 10 ++
R/zzz.R | 47 ++++++------
demo/ayulemle.r | 10 ++
demo/network.r | 10 ++
demo/pln.r | 10 ++
inst/CITATION | 29 ++-----
man/acmpmle.Rd |only
man/adqemle.Rd |only
man/aplnmle.Rd | 174 ++++++++++++++++++++++++----------------------
man/arplnmle.Rd | 136 +++++++++++++++++++----------------
man/awarmle.Rd | 8 ++
man/ayulemle.Rd | 8 ++
man/bsdp.Rd | 8 ++
man/bsnb.Rd | 8 ++
man/bspln.Rd | 10 ++
man/bswar.Rd | 8 ++
man/bsyule.Rd | 8 ++
man/degreenet-internal.Rd | 10 ++
man/degreenet-package.Rd | 30 +++++--
man/gyulemle.Rd | 8 ++
man/llgyule.Rd | 8 ++
man/llgyuleall.Rd | 8 ++
man/llpln.Rd | 143 ++++++++++++++++++++-----------------
man/llyule.Rd | 8 ++
man/llyuleall.Rd | 8 ++
man/reedmolloy.Rd | 89 ++++++++++++-----------
man/ryule.Rd | 8 ++
man/simcmp.Rd |only
man/simdp.Rd | 8 ++
man/simnb.Rd | 8 ++
man/simpln.Rd | 75 +++++++++++--------
man/simwar.Rd | 8 ++
man/simyule.Rd | 8 ++
man/sweden.Rd | 8 ++
src/cmp.c |only
src/cmp.h |only
src/dpoilog.c |only
src/dpoilog.h |only
50 files changed, 889 insertions(+), 417 deletions(-)
Title: Rcpp R/C++ interface package
Diff between Rcpp versions 0.7.0 dated 2009-12-20 and 0.7.1 dated 2010-01-03
Description: R/C++ interface classes and examples The Rcpp library maps
data types betweeen R and C++, and includes support for R types
real, integer, character, vector, matrix, Date, datetime (i.e.
POSIXct) at microsecond resolution, data frame, and function.
Transer to and from simple SEXP objects is particular easy.
Calling R functions from C++ is also supported.
C++ code can be 'inlined' by using the 'inline' package which will
create a C++ function and compile, link and load it given the
'inlined' character argument which makes C++ integration very
easy.
Several examples are included.
Author: Dirk Eddelbuettel and Romain Francois, with contributions by
Simon Urbanek and David Reiss; based on code written during
2005 and 2006 by Dominick Samperi
Maintainer: Dirk Eddelbuettel
Rcpp-0.7.0/Rcpp/R/RcppInline.R |only
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Rcpp-0.7.1/Rcpp/inst/ChangeLog | 204 +
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Rcpp-0.7.1/Rcpp/inst/doc/man/man3/MyRVectorFunc.3 | 2
Rcpp-0.7.1/Rcpp/inst/doc/man/man3/RObject.cpp.3 |only
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Rcpp-0.7.1/Rcpp/inst/doc/man/man3/RcppCommon.cpp.3 | 2
Rcpp-0.7.1/Rcpp/inst/doc/man/man3/RcppCommon.h.3 | 32
Rcpp-0.7.1/Rcpp/inst/doc/man/man3/RcppDate.3 | 2
Rcpp-0.7.1/Rcpp/inst/doc/man/man3/RcppDate.cpp.3 | 2
Rcpp-0.7.1/Rcpp/inst/doc/man/man3/RcppDate.h.3 | 2
Rcpp-0.7.1/Rcpp/inst/doc/man/man3/RcppDateVector.3 | 2
Rcpp-0.7.1/Rcpp/inst/doc/man/man3/RcppDateVector.cpp.3 | 2
Rcpp-0.7.1/Rcpp/inst/doc/man/man3/RcppDateVector.h.3 | 2
Rcpp-0.7.1/Rcpp/inst/doc/man/man3/RcppDatetime.3 | 2
Rcpp-0.7.1/Rcpp/inst/doc/man/man3/RcppDatetime.cpp.3 | 2
Rcpp-0.7.1/Rcpp/inst/doc/man/man3/RcppDatetime.h.3 | 2
Rcpp-0.7.1/Rcpp/inst/doc/man/man3/RcppDatetimeVector.3 | 2
Rcpp-0.7.1/Rcpp/inst/doc/man/man3/RcppDatetimeVector.cpp.3 | 2
Rcpp-0.7.1/Rcpp/inst/doc/man/man3/RcppDatetimeVector.h.3 | 2
Rcpp-0.7.1/Rcpp/inst/doc/man/man3/RcppExample.cpp.3 | 14
Rcpp-0.7.1/Rcpp/inst/doc/man/man3/RcppFrame.3 | 2
Rcpp-0.7.1/Rcpp/inst/doc/man/man3/RcppFrame.cpp.3 | 2
Rcpp-0.7.1/Rcpp/inst/doc/man/man3/RcppFrame.h.3 | 2
Rcpp-0.7.1/Rcpp/inst/doc/man/man3/RcppFunction.3 | 2
Rcpp-0.7.1/Rcpp/inst/doc/man/man3/RcppFunction.cpp.3 | 2
Rcpp-0.7.1/Rcpp/inst/doc/man/man3/RcppFunction.h.3 | 2
Rcpp-0.7.1/Rcpp/inst/doc/man/man3/RcppList.3 | 2
Rcpp-0.7.1/Rcpp/inst/doc/man/man3/RcppList.cpp.3 | 2
Rcpp-0.7.1/Rcpp/inst/doc/man/man3/RcppList.h.3 | 2
Rcpp-0.7.1/Rcpp/inst/doc/man/man3/RcppMatrix.3 | 2
Rcpp-0.7.1/Rcpp/inst/doc/man/man3/RcppMatrix.cpp.3 | 2
Rcpp-0.7.1/Rcpp/inst/doc/man/man3/RcppMatrix.h.3 | 2
Rcpp-0.7.1/Rcpp/inst/doc/man/man3/RcppMatrixView.3 | 2
Rcpp-0.7.1/Rcpp/inst/doc/man/man3/RcppMatrixView.cpp.3 | 2
Rcpp-0.7.1/Rcpp/inst/doc/man/man3/RcppMatrixView.h.3 | 2
Rcpp-0.7.1/Rcpp/inst/doc/man/man3/RcppNumList.3 | 2
Rcpp-0.7.1/Rcpp/inst/doc/man/man3/RcppNumList.cpp.3 | 2
Rcpp-0.7.1/Rcpp/inst/doc/man/man3/RcppNumList.h.3 | 2
Rcpp-0.7.1/Rcpp/inst/doc/man/man3/RcppParams.3 | 2
Rcpp-0.7.1/Rcpp/inst/doc/man/man3/RcppParams.cpp.3 | 2
Rcpp-0.7.1/Rcpp/inst/doc/man/man3/RcppParams.h.3 | 2
Rcpp-0.7.1/Rcpp/inst/doc/man/man3/RcppResultSet.3 | 2
Rcpp-0.7.1/Rcpp/inst/doc/man/man3/RcppResultSet.cpp.3 | 2
Rcpp-0.7.1/Rcpp/inst/doc/man/man3/RcppResultSet.h.3 | 2
Rcpp-0.7.1/Rcpp/inst/doc/man/man3/RcppSexp.3 | 242 -
Rcpp-0.7.1/Rcpp/inst/doc/man/man3/RcppSexp.h.3 | 4
Rcpp-0.7.1/Rcpp/inst/doc/man/man3/RcppStringVector.3 | 2
Rcpp-0.7.1/Rcpp/inst/doc/man/man3/RcppStringVector.cpp.3 | 2
Rcpp-0.7.1/Rcpp/inst/doc/man/man3/RcppStringVector.h.3 | 2
Rcpp-0.7.1/Rcpp/inst/doc/man/man3/RcppStringVectorView.3 | 2
Rcpp-0.7.1/Rcpp/inst/doc/man/man3/RcppStringVectorView.cpp.3 | 2
Rcpp-0.7.1/Rcpp/inst/doc/man/man3/RcppStringVectorView.h.3 | 2
Rcpp-0.7.1/Rcpp/inst/doc/man/man3/RcppVector.3 | 2
Rcpp-0.7.1/Rcpp/inst/doc/man/man3/RcppVector.cpp.3 | 2
Rcpp-0.7.1/Rcpp/inst/doc/man/man3/RcppVector.h.3 | 2
Rcpp-0.7.1/Rcpp/inst/doc/man/man3/RcppVectorView.3 | 2
Rcpp-0.7.1/Rcpp/inst/doc/man/man3/RcppVectorView.cpp.3 | 2
Rcpp-0.7.1/Rcpp/inst/doc/man/man3/RcppVectorView.h.3 | 2
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Rcpp-0.7.1/Rcpp/inst/examples/RcppInline/RcppInlineExample.r | 1
Rcpp-0.7.1/Rcpp/inst/examples/RcppInline/RcppInlineWithLibsExamples.r | 117
Rcpp-0.7.1/Rcpp/inst/examples/RcppInline/RcppSexpTests.r | 208 +
Rcpp-0.7.1/Rcpp/inst/examples/RcppInline/RcppSimpleExample.r | 1
Rcpp-0.7.1/Rcpp/inst/examples/RcppInline/RcppSimpleTests.r | 1
Rcpp-0.7.1/Rcpp/inst/examples/RcppInline/UncaughtExceptions.r |only
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Rcpp-0.7.1/Rcpp/src/Makevars | 2
Rcpp-0.7.1/Rcpp/src/Makevars.win | 3
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Rcpp-0.7.1/Rcpp/src/Rcpp.h | 7
Rcpp-0.7.1/Rcpp/src/RcppCommon.cpp | 1
Rcpp-0.7.1/Rcpp/src/RcppCommon.h | 8
Rcpp-0.7.1/Rcpp/src/RcppExample.cpp | 15
Rcpp-0.7.1/Rcpp/src/RcppSexp.h | 131
Rcpp-0.7.1/Rcpp/src/exceptions.cpp |only
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937 files changed, 19075 insertions(+), 12154 deletions(-)
Title: Various programming utilities
Diff between R.utils versions 1.2.4 dated 2009-11-02 and 1.3.0 dated 2010-01-03
Description: This package provides utility classes and methods useful
when programming in R and developing R packages.
Author: Henrik Bengtsson
Maintainer: Henrik Bengtsson
DESCRIPTION | 8 -
R/999.NonDocumentedObjects.R | 9 +
R/Arguments.R | 183 ++++++++++++++++++++++++++++++++---
R/GenericSummary.R |only
R/filePath.R | 17 ++-
R/getAbsolutePath.R | 20 +++
R/getCommonPrefix.R |only
R/getParent.R | 13 ++
R/getRelativePath.R | 15 ++
R/isDirectory.R | 5
R/isFile.R | 5
R/isZero.R | 4
R/loadObject.R | 2
R/loadToEnv.R | 12 +-
R/mergeByCommonTails.R |only
R/splitByCommonTails.R |only
incl/GString.Rex | 2
incl/isZero.Rex | 9 +
inst/NEWS | 29 +++++
man/Arguments.Rd | 1
man/GString.Rd | 2
man/Non-documented_objects.Rd | 8 +
man/filePath.Rd | 3
man/getIndices.Arguments.Rd | 13 +-
man/getInstanceOf.Arguments.Rd |only
man/getReadablePathname.Arguments.Rd | 5
man/getWritablePathname.Arguments.Rd | 4
man/isZero.Rd | 11 +-
man/loadToEnv.Rd | 5
29 files changed, 337 insertions(+), 48 deletions(-)
Title: R object-oriented programming with or without references
Diff between R.oo versions 1.6.5 dated 2009-11-02 and 1.6.6 dated 2010-01-03
Description: Methods and classes for object-oriented programming in R
with or without references. Large effort has been made on
making definition of methods as simple as possible with a
minimum of maintenance for package developers. The package has
been developed since 2001 and is now considered very stable.
This is a cross-platform package implemented in pure R that
defines standard S3 classes without any tricks.
Author: Henrik Bengtsson
Maintainer: Henrik Bengtsson
DESCRIPTION | 10 ++++++----
R/999.NonDocumentedObjects.R | 1 +
R/Package.R | 37 +++++++++++++++++++++++++++++++++++++
inst/NEWS | 4 ++++
man/Non-documented_objects.Rd | 1 +
man/Package.Rd | 1 +
man/getVersion.Package.Rd | 1 +
man/isOlderThan.Package.Rd |only
8 files changed, 51 insertions(+), 4 deletions(-)
Title: Utility function for defining S3 methods
Diff between R.methodsS3 versions 1.0.3 dated 2008-07-05 and 1.1.0 dated 2010-01-03
Description: Methods that simplify the setup of S3 generic functions
and S3 methods. Major effort has been made in making
definition of methods as simple as possible with a minimum of
maintenance for package developers. For example, generic
functions are created automatically, if missing, and naming
conflict are automatically solved, if possible. The method
setMethodS3() is a good start for those who in the future want
to migrate to S4. This is a cross-platform package implemented
in pure R and generates standard S3 methods.
Author: Henrik Bengtsson
Maintainer: Henrik Bengtsson
DESCRIPTION | 38 ++++++++++++++++++++++++--------------
R/findDispatchMethodsS3.R |only
R/getDispatchMethodS3.R |only
inst/NEWS | 6 +++++-
man/R.methodsS3-package.Rd | 2 +-
man/findDispatchMethodsS3.Rd |only
man/getDispatchMethodS3.Rd |only
7 files changed, 30 insertions(+), 16 deletions(-)
Title: Main Package of Venables and Ripley's MASS
Diff between MASS versions 7.3-4 dated 2009-11-23 and 7.3-5 dated 2010-01-03
Description: Functions and datasets to support Venables and Ripley,
'Modern Applied Statistics with S' (4th edition).
Author: S original by Venables & Ripley. R port by Brian Ripley
Maintainer: Brian Ripley
DESCRIPTION | 10 +--
R/fitdistr.R | 1
R/kde2d.R | 18 +++---
inst/NEWS | 1
man/OME.Rd | 6 --
man/Pima.tr.Rd | 2
man/fitdistr.Rd | 21 ++++---
man/kde2d.Rd | 11 ++--
man/polr.Rd | 2
man/rms.curv.Rd | 7 +-
man/theta.md.Rd | 4 -
tests/Examples/MASS-Ex.Rout.save | 106 +++++++++++++++++----------------------
12 files changed, 93 insertions(+), 96 deletions(-)
Title: Fractional Factorial designs with 2-level factors
Diff between FrF2 versions 1.0-3 dated 2009-12-10 and 1.0-4 dated 2010-01-03
Description: This package creates regular and non-regular Fractional
Factorial designs. Furthermore, analysis tools for Fractional
Factorial designs with 2-level factors are offered (main
effects and interaction plots for all factors simultaneously,
cube plot for looking at the simultaneous effects of three
factors, full or half normal plot, alias structure in a more
readable format than with the built-in function alias). The
package is currently subject to intensive development. While
much of the intended functionality is already available, some
changes and improvements are still to be expected. Suggestions
are welcome.
Author: Ulrike Groemping
Maintainer: Ulrike Groemping
DESCRIPTION | 8 ++++----
NAMESPACE | 2 +-
R/compromise.R |only
R/estimable2fis.R | 7 ++++---
inst/NEWS | 4 ++++
man/compromise.Rd |only
man/estimable.2fis.Rd | 23 ++++++++++++++++-------
7 files changed, 29 insertions(+), 15 deletions(-)
Title: Full factorials, orthogonal arrays and base utilities for DoE
packages
Diff between DoE.base versions 0.9-10 dated 2009-11-27 and 0.9-11 dated 2010-01-03
Description: This package creates full factorial experimental designs
and designs based on orthogonal arrays for (industrial)
experiments. Additionally, it provides some utility functions
used also by other DoE packages.
Author: Ulrike Groemping
Maintainer: Ulrike Groemping
DESCRIPTION | 8 ++++----
R/export.design.R | 5 +++--
R/printandsummary.design.R | 21 +++++++++++++++++----
inst/NEWS | 12 +++++++++++-
4 files changed, 35 insertions(+), 11 deletions(-)