Title: Miscellanneous Tools and Utilities
Diff between miscTools versions 0.6-6 dated 2010-08-12 and 0.6-10 dated 2010-10-15
Description: Miscellanneous small tools and utilities
Author: Arne Henningsen, Ott Toomet
Maintainer: Arne Henningsen
DESCRIPTION | 8 ++++----
INDEX | 1 +
NAMESPACE | 3 +++
NEWS | 11 +++++++++++
R/stdEr.R |only
man/stdEr.Rd |only
tests/stdErTests.R |only
tests/stdErTests.Rout.save |only
8 files changed, 19 insertions(+), 4 deletions(-)
Title: Maximum Likelihood Estimation
Diff between maxLik versions 0.8-0 dated 2010-08-12 and 1.0-0 dated 2010-10-15
Description: Tools for Maximum Likelihood Estimation
Author: Ott Toomet
Maintainer: Arne Henningsen
maxLik-0.8-0/maxLik/R/stdEr.R |only
maxLik-0.8-0/maxLik/man/stdEr.Rd |only
maxLik-1.0-0/maxLik/DESCRIPTION | 10 +++++-----
maxLik-1.0-0/maxLik/INDEX | 1 -
maxLik-1.0-0/maxLik/NAMESPACE | 3 ---
maxLik-1.0-0/maxLik/NEWS | 12 ++++++++++++
maxLik-1.0-0/maxLik/R/maxNRCompute.R | 10 +++++++++-
7 files changed, 26 insertions(+), 10 deletions(-)
Title: GAMLSS Utilities.
Diff between gamlss.util versions 4.0-0 dated 2010-05-22 and 4.0-4 dated 2010-10-15
Description: Extra utilities for GAMLSS models.
Author: Mikis Stasinopoulos
Maintainer: Mikis Stasinopoulos
DESCRIPTION | 12 ++++++------
R/freeKnots.R | 16 ++++++++++------
man/Locmean.Rd | 3 +--
man/fitFixBP.Rd | 2 +-
4 files changed, 18 insertions(+), 15 deletions(-)
Title: Generating and fitting truncated (gamlss.family) distributions
Diff between gamlss.tr versions 4.0-0 dated 2010-05-22 and 4.0-4 dated 2010-10-15
Description: This is an add on package to GAMLSS. The purpose of this
package is to allow users to defined truncated distributions in
GAMLSS models. The main function gen.trun() generates truncated
version of an existing GAMLSS family distribution.
Author: Mikis Stasinopoulos
Maintainer: Mikis Stasinopoulos
DESCRIPTION | 10 +++++-----
man/gamlss.tr.package.Rd | 2 +-
man/gen.trun.Rd | 2 +-
man/trun.Rd | 2 +-
man/trun.d.Rd | 2 +-
man/trun.p.Rd | 2 +-
man/trun.q.Rd | 2 +-
man/trun.r.Rd | 2 +-
8 files changed, 12 insertions(+), 12 deletions(-)
Title: Fitting non linear parametric GAMLSS models
Diff between gamlss.nl versions 4.0-0 dated 2010-05-22 and 4.0-4 dated 2010-10-15
Description: This is an add on package to GAMLSS. It allows one extra
method for fitting GAMLSS models. The main function nlgamlss()
can fit any parametric (up to four parameter) GAMLSS
distribution.
Author: Mikis Stasinopoulos
Maintainer: Mikis Stasinopoulos
DESCRIPTION | 10 +++++-----
man/NL.control.Rd | 2 +-
man/gamlss.nl.package.Rd | 2 +-
man/nl.Rd | 3 +--
man/nlgamlss.Rd | 2 +-
5 files changed, 9 insertions(+), 10 deletions(-)
Title: A GAMLSS add on package for fitting mixture distributions
Diff between gamlss.mx versions 4.0-0 dated 2010-05-22 and 4.0-4 dated 2010-10-15
Description: The main purpose of this package is to allow fitting of
mixture distributions with GAMLSS models.
Author: Mikis Stasinopoulos
Maintainer: Mikis Stasinopoulos
DESCRIPTION | 10 +++++-----
R/gamlssNP.R | 3 +--
man/MX.control.Rd | 2 +-
man/gamlss.mx.package.Rd | 2 +-
man/gamlssMX.Rd | 3 +--
man/gamlssNP.Rd | 2 +-
6 files changed, 10 insertions(+), 12 deletions(-)
Title: Distributions to be used for GAMLSS modelling.
Diff between gamlss.dist versions 4.0-0 dated 2010-05-19 and 4.0-4 dated 2010-10-15
Description: This package contains the distributions for GAMLSS
modelling.
Author: Mikis Stasinopoulos
Maintainer: Mikis Stasinopoulos
DESCRIPTION | 12 ++++++------
man/BB.Rd | 2 +-
man/BCCG.Rd | 2 +-
man/BCPE.Rd | 2 +-
man/BCt.Rd | 2 +-
man/BE.Rd | 2 +-
man/BEINF.Rd | 2 +-
man/BEOI.Rd | 2 +-
man/BEZI.Rd | 2 +-
man/BI.Rd | 2 +-
man/DEL.Rd | 2 +-
man/EGB2.Rd | 2 +-
man/EXP.Rd | 2 +-
man/GA.Rd | 2 +-
man/GB1.Rd | 2 +-
man/GB2.Rd | 2 +-
man/GG.Rd | 2 +-
man/GIG.Rd | 2 +-
man/GT.Rd | 2 +-
man/GU.rd | 2 +-
man/IG.Rd | 2 +-
man/JSU.Rd | 2 +-
man/JSUoriginal.Rd | 2 +-
man/LG.Rd | 5 ++---
man/LNO.Rd | 2 +-
man/LOGISTIC.Rd | 2 +-
man/NBI.Rd | 2 +-
man/NBII.Rd | 2 +-
man/NET.Rd | 2 +-
man/NO.Rd | 2 +-
man/NO2.Rd | 2 +-
man/NOF.Rd | 2 +-
man/PE.Rd | 2 +-
man/PIG.Rd | 2 +-
man/PO.Rd | 2 +-
man/RG.Rd | 2 +-
man/RGE.Rd | 2 +-
man/SEP.Rd | 2 +-
man/SEP1.Rd | 2 +-
man/SHASH.Rd | 2 +-
man/SI.Rd | 2 +-
man/SICHEL.Rd | 2 +-
man/ST1.Rd | 2 +-
man/TF.Rd | 2 +-
man/WEI.Rd | 2 +-
man/WEI2.Rd | 2 +-
man/WEI3.Rd | 2 +-
man/ZABB.Rd | 4 ++--
man/ZABI.Rd | 4 ++--
man/ZAGA.Rd | 2 +-
man/ZAIG.Rd | 2 +-
man/ZANBI.Rd | 4 ++--
man/ZAP.Rd | 4 ++--
man/ZIP.Rd | 2 +-
man/ZIP2.Rd | 2 +-
man/ZIPIG.Rd | 4 ++--
man/checklink.Rd | 2 +-
man/exGAUS.Rd | 2 +-
man/gamlss.dist.package.Rd | 2 +-
man/gamlss.family.Rd | 2 +-
man/make.link.gamlss.Rd | 2 +-
61 files changed, 72 insertions(+), 73 deletions(-)
Title: GAMLSS Data.
Diff between gamlss.data versions 4.0-1 dated 2010-08-16 and 4.0-4 dated 2010-10-15
Description: Data for GAMLSS models.
Author: Mikis Stasinopoulos
Maintainer: Mikis Stasinopoulos
DESCRIPTION | 10 +++++-----
man/VictimsOfCrime.Rd | 2 +-
2 files changed, 6 insertions(+), 6 deletions(-)
Title: Fitting an interval response variable using gamlss.family
distributions
Diff between gamlss.cens versions 4.0.0 dated 2010-05-22 and 4.0.4 dated 2010-10-15
Description: This is an add on package to GAMLSS. The purpose of this
package is to allow users to fit interval response variables in
GAMLSS models. The main function gen.cens() generates a
censored version of an existing GAMLSS family distribution.
Author: Mikis Stasinopoulos
Maintainer: Mikis Stasinopoulos
DESCRIPTION | 12 ++++++------
man/cens.Rd | 2 +-
man/cens.d.Rd | 2 +-
man/cens.p.Rd | 2 +-
man/cens.q.Rd | 2 +-
man/gamlss.cens-package.Rd | 2 +-
man/gen.cens.Rd | 2 +-
7 files changed, 12 insertions(+), 12 deletions(-)
Title: GAMLSS Additive.
Diff between gamlss.add versions 4.0-1 dated 2010-08-16 and 4.0-4 dated 2010-10-15
Description: Extra additive terms for GAMLSS models.
Author: Mikis Stasinopoulos
Maintainer: Mikis Stasinopoulos
DESCRIPTION | 13 +++++++------
man/fk.Rd | 2 +-
man/ga.Rd | 2 +-
man/gamlss.fk.Rd | 3 +--
man/gamlss.ga.Rd | 3 +--
man/gamlss.nn.Rd | 2 +-
man/nn.Rd | 2 +-
7 files changed, 13 insertions(+), 14 deletions(-)
Title: Generalized Additive Models for Location Scale and Shape.
Diff between gamlss versions 4.0-3 dated 2010-08-16 and 4.0-4 dated 2010-10-15
Description: The library for fitting GAMLSS models.
Author: Mikis Stasinopoulos
Maintainer: Mikis Stasinopoulos
DESCRIPTION | 12 ++++++------
NAMESPACE | 2 +-
R/dop.R |only
inst/doc/NEWS.txt | 7 +++++++
man/IC.Rd | 2 +-
man/LR.test.Rd | 3 +--
man/Q.stats.Rd | 2 +-
man/VGD.Rd | 2 +-
man/additive.fit.Rd | 2 +-
man/bfp.Rd | 2 +-
man/centiles.Rd | 2 +-
man/centiles.com.Rd | 2 +-
man/centiles.pred.Rd | 2 +-
man/centiles.split.Rd | 2 +-
man/coef.gamlss.Rd | 2 +-
man/cs.Rd | 2 +-
man/deviance.gamlss.Rd | 2 +-
man/dop.Rd |only
man/edf.Rd | 3 +--
man/findhyper.Rd | 2 +-
man/fitted.gamlss.Rd | 2 +-
man/fitted.plot.Rd | 2 +-
man/formula.gamlss.Rd | 2 +-
man/gamlss.Rd | 2 +-
man/gamlss.control.Rd | 2 +-
man/gamlss.fp.Rd | 2 +-
man/gamlss.package.Rd | 2 +-
man/gamlss.ps.Rd | 2 +-
man/gamlss.ra.Rd | 2 +-
man/gamlss.random.Rd | 2 +-
man/gamlss.rc.Rd | 2 +-
man/gamlss.scope.Rd | 2 +-
man/glim.control.Rd | 2 +-
man/histDist.Rd | 2 +-
man/lo.Rd | 2 +-
man/lpred.Rd | 2 +-
man/model.frame.gamlss.Rd | 2 +-
man/par.plot.Rd | 2 +-
man/pdf.plot.Rd | 2 +-
man/plot.gamlss.Rd | 2 +-
man/polyS.Rd | 2 +-
man/predict.gamlss.Rd | 2 +-
man/print.gamlss.Rd | 2 +-
man/prof.dev.Rd | 2 +-
man/prof.term.Rd | 2 +-
man/ra.Rd | 2 +-
man/random.Rd | 2 +-
man/rc.Rd | 2 +-
man/refit.Rd | 2 +-
man/residuals.gamlss.Rd | 2 +-
man/ridge.Rd | 2 +-
man/rqres.plot.Rd | 2 +-
man/stepGAIC.Rd | 2 +-
man/summary.gamlss.Rd | 2 +-
man/term.plot.Rd | 2 +-
man/update.gamlss.Rd | 2 +-
man/wp.Rd | 2 +-
57 files changed, 66 insertions(+), 61 deletions(-)
Title: Composite-likelihood based Analysis of Random Fields
Diff between CompRandFld versions 0.2 dated 2010-10-01 and 0.3 dated 2010-10-15
Description: The aim of this package is to collect a set of procedures
for the analysis of Random Fields by Composite Likelihood
methods. Spatial analysis often involves dealing with large
dataset. Therefore even simple studies may be too
computationally demanding. Composite likelihood based methods
are emerging as useful tools for mitigating such computational
problems and show satisfactory results when compared with other
techniques such as, for example the tapering method. Moreover,
composite likelihood (and related quantities) have some good
properties similar to those of the standard likelihood.
Author: Simone Padoan
Maintainer: Simone Padoan
DESCRIPTION | 8 +++++---
R/Fitting.r | 2 +-
inst/doc/CompRandFld-manual.pdf |binary
3 files changed, 6 insertions(+), 4 deletions(-)
Title: Functions to use vegetation databases (Turboveg) for vegetation
analyses in R
Diff between vegdata versions 0.1.8 dated 2010-07-24 and 0.2 dated 2010-10-15
Description: Handling of vegetation data sets from Turboveg Databases.
Taxonomic evaluation for databases with German taxonomical
standard list.
Author: Florian Jansen
Maintainer: Florian Jansen
vegdata-0.1.8/vegdata/R/freqtab.r |only
vegdata-0.1.8/vegdata/R/tv.taxval-old.r |only
vegdata-0.1.8/vegdata/man/freqtab.rd |only
vegdata-0.2/vegdata/DESCRIPTION | 16 +++++++++-------
vegdata-0.2/vegdata/R/syntab.r |only
vegdata-0.2/vegdata/R/tax.r | 5 ++++-
vegdata-0.2/vegdata/R/tv.biblio.r |only
vegdata-0.2/vegdata/R/tv.home.r | 29 +++++++++++++++++++++++------
vegdata-0.2/vegdata/R/tv.site.r | 9 +++++----
vegdata-0.2/vegdata/R/tv.taxval.r | 5 ++---
vegdata-0.2/vegdata/R/tv.veg.r | 3 +--
vegdata-0.2/vegdata/R/zzz.r |only
vegdata-0.2/vegdata/inst/CITATION | 21 +++++++++++----------
vegdata-0.2/vegdata/inst/ChangeLog | 5 +++++
vegdata-0.2/vegdata/inst/doc/vegdata.pdf |binary
vegdata-0.2/vegdata/inst/doc/vegdata.rnw | 25 ++++++++++++-------------
vegdata-0.2/vegdata/man/syntab.rd |only
vegdata-0.2/vegdata/man/tv.biblio.rd |only
vegdata-0.2/vegdata/man/tv.site.rd | 3 ++-
vegdata-0.2/vegdata/man/vegdata-package.rd |only
20 files changed, 74 insertions(+), 47 deletions(-)
Title: Interactive manipulation of R expressions
Diff between twiddler versions 0.2-0 dated 2010-05-22 and 0.3-0 dated 2010-10-15
Description: Twiddler is an interactive tool that automatically creates
a Tcl/Tk GUI for manipulating variables in any R expression.
See the documentation of the function twiddle to get started.
Author: Oliver Flasch, Olaf Mersmann
Maintainer: Oliver Flasch
DESCRIPTION | 6 +++---
NAMESPACE | 1 +
R/twiddler.r | 30 +++++++++++++++++++++++++++---
man/twiddle_print.Rd |only
man/twiddler.Rd | 13 ++++++++++++-
5 files changed, 43 insertions(+), 7 deletions(-)
Title: A Device for R Graphics Output in PGF/TikZ Format
Diff between tikzDevice versions 0.5.1 dated 2010-10-12 and 0.5.2 dated 2010-10-15
Description: The TikZ device enables LaTeX-ready output from R graphics
functions. This is done by producing code that can be
understood by the TikZ graphics language. All text in a graphic
output with the tikz() function will can be typeset by LaTeX
and therefore will match whatever fonts are currently used in
the document. This also means that LaTeX mathematics can be
typeset directly into labels and annotations! Graphics
produced this way can also be annotated with custom TikZ
commands.
Author: Charlie Sharpsteen and Cameron Bracken
Maintainer: The tikzDevice team
CHANGELOG.md | 34 +
DESCRIPTION | 10
R/zzz.R | 2
README.md | 31 -
inst/GIT_VERSION | 2
inst/doc/figs |only
inst/doc/patchSweave.R | 779 +++++++++++++++++++++++++++++-------------
inst/doc/tikzDevice.Rnw | 38 --
inst/doc/tikzDevice.pdf |binary
inst/doc/tikzDeviceMacros.tex | 1
src/tikzDevice.c | 12
11 files changed, 607 insertions(+), 302 deletions(-)
Title: R genetic programming framework
Diff between rgp versions 0.2-1 dated 2010-08-25 and 0.2-2 dated 2010-10-15
Description: RGP is a simple modular Genetic Programming (GP) system
build in pure R. In addition to general GP tasks, the system
supports Symbolic Regression by GP through the familiar R model
formula interface. GP individuals are represented as R
expressions, an (optional) type system enables domain-specific
function sets containing functions of diverse domain- and range
types. A basic set of genetic operators for variation (mutation
and crossover) and selection is provided.
Author: Oliver Flasch, Olaf Mersmann, Thomas Bartz-Beielstein, Joerg
Stork
Maintainer: Oliver Flasch
rgp-0.2-1/rgp/man/randfunc.Rd |only
rgp-0.2-1/rgp/man/randfuncTyped.Rd |only
rgp-0.2-2/rgp/DESCRIPTION | 14
rgp-0.2-2/rgp/NAMESPACE | 12
rgp-0.2-2/rgp/R/creation.r | 20 +
rgp-0.2-2/rgp/R/evolution.r | 344 +++++++++++++++---
rgp-0.2-2/rgp/R/list_utils.r | 45 ++
rgp-0.2-2/rgp/R/niching.r |only
rgp-0.2-2/rgp/R/population.r | 7
rgp-0.2-2/rgp/R/selection.r | 26 -
rgp-0.2-2/rgp/R/time_utils.r |only
rgp-0.2-2/rgp/man/evolutionRestartConditions.Rd |only
rgp-0.2-2/rgp/man/evolutionRestartStrategies.Rd |only
rgp-0.2-2/rgp/man/evolutionStopConditions.Rd | 20 -
rgp-0.2-2/rgp/man/formatSeconds.Rd |only
rgp-0.2-2/rgp/man/geneticProgramming.Rd | 54 +-
rgp-0.2-2/rgp/man/joinElites.Rd |only
rgp-0.2-2/rgp/man/listSplittingAndGrouping.Rd |only
rgp-0.2-2/rgp/man/multiNicheGeneticProgramming.Rd |only
rgp-0.2-2/rgp/man/multiNicheSymbolicRegression.Rd |only
rgp-0.2-2/rgp/man/populationClustering.Rd |only
rgp-0.2-2/rgp/man/populationCreation.Rd | 9
rgp-0.2-2/rgp/man/randomFunctionCreation.Rd |only
rgp-0.2-2/rgp/man/randomFunctionCreationTyped.Rd |only
rgp-0.2-2/rgp/man/selectionFunctions.Rd | 17
rgp-0.2-2/rgp/man/summary.geneticProgrammingResult.Rd |only
rgp-0.2-2/rgp/man/symbolicRegression.Rd | 33 +
rgp-0.2-2/rgp/src/c_interface_test.c | 70 ++-
rgp-0.2-2/rgp/src/list_utils.c |only
rgp-0.2-2/rgp/src/list_utils.h |only
rgp-0.2-2/rgp/src/sexp_utils.c | 35 -
rgp-0.2-2/rgp/src/sexp_utils.h | 6
rgp-0.2-2/rgp/src/unification.c |only
rgp-0.2-2/rgp/src/unification.h |only
34 files changed, 551 insertions(+), 161 deletions(-)
Title: Forecasting functions for time series
Diff between forecast versions 2.08 dated 2010-09-22 and 2.09 dated 2010-10-15
Description: Methods and tools for displaying and analysing univariate
time series forecasts including exponential smoothing via state
space models and automatic ARIMA modelling.
Author: Rob J Hyndman
Maintainer: Rob J Hyndman
ChangeLog | 9 +++++++--
DESCRIPTION | 12 ++++++------
R/arfima.R | 26 ++++++++++++++++----------
R/forecast.R | 35 ++++++++++++++++++++++++++++-------
R/newarima2.R | 16 +---------------
man/forecastplot.Rd | 9 ++++++---
6 files changed, 64 insertions(+), 43 deletions(-)
Title: Bayesian Fertility Projection
Diff between bayesTFR versions 1.0-0 dated 2010-10-05 and 1.1-0 dated 2010-10-15
Description: Making probabilistic projections of total fertility rate
for all countries of the world, using a Bayesian hierarchical
model.
Author: Hana Sevcikova
Maintainer: Hana Sevcikova
ChangeLog | 10
DESCRIPTION | 8
NAMESPACE | 6
R/get_outputs.R | 19 +
R/mcmc_storage.R | 6
R/plot_functions.R | 24 +-
R/predict_tfr.R | 106 ++++++++--
data/UN2008.txt | 460 ++++++++++++++++++++++----------------------
man/bayesTFR-internal.Rd | 2
man/bayesTFR-package.Rd | 4
man/get.tfr.trajectories.Rd |only
man/tfr.median.set.Rd |only
tests/run_tests.R |only
tests/test_functions.R | 38 ++-
14 files changed, 409 insertions(+), 274 deletions(-)
Title: Graphical User Interface for bayesTFR
Diff between bayesDem versions 1.0-0 dated 2010-10-07 and 1.1-0 dated 2010-10-15
Description: Provides Graphical user interface for the package
bayesTFR.
Author: Hana Sevcikova
Maintainer: Hana Sevcikova
bayesDem-1.0-0/bayesDem/R/generic_handlers.R |only
bayesDem-1.1-0/bayesDem/ChangeLog | 4
bayesDem-1.1-0/bayesDem/DESCRIPTION | 8 -
bayesDem-1.1-0/bayesDem/R/handlers_and_fncs.R |only
bayesDem-1.1-0/bayesDem/R/tfr-predict.R | 134 +++++++++++++++++++++---
bayesDem-1.1-0/bayesDem/man/bayesDem-package.Rd | 4
6 files changed, 128 insertions(+), 22 deletions(-)
Title: Constrained nonlinear optimization
Diff between alabama versions 2010.9-1 dated 2010-09-27 and 2010.10-1 dated 2010-10-15
Description: Augmented Lagrangian Adaptive Barrier Minimization
Algorithm for optimizing smooth nonlinear objective functions
with constraints. Linear or nonlinear equality and inequality
constraints are allowed.
Author: Ravi Varadhan (with contributions from Gabor Grothendieck)
Maintainer: Ravi Varadhan
DESCRIPTION | 8 ++++----
NEWS |only
R/auglag.R | 27 ++++++++++++---------------
R/constrOptim.nl.R | 38 +++++++++++++++-----------------------
demo/alabama.R | 44 ++++----------------------------------------
man/alabama-package.Rd | 2 +-
man/auglag.Rd | 15 +++++++++------
man/constrOptim.nl.Rd | 4 ++--
8 files changed, 47 insertions(+), 91 deletions(-)
Title: Sequential Parameter Optimization
Diff between SPOT versions 0.1.1016 dated 2010-08-31 and 0.1.1065 dated 2010-10-15
Description: R-Package for Sequential Parameter Optimization Toolbox
Author: T. Bartz-Beielstein with contributions from: J. Ziegenhirt, W.
Konen, O. Flasch, P. Koch, M. Zaefferer
Maintainer: O. Flasch
DESCRIPTION | 8
R/spot.R | 184 +++++-----
R/spotAlgStartEs.R | 166 +++++----
R/spotAlgStartSann.R | 50 +-
R/spotCreateDesignDoeR3.R | 7
R/spotCreateDesignFrF2.R | 7
R/spotCreateDesignLhd.R | 16
R/spotCreateDesignLhs.R | 8
R/spotFuncStartBranin.R | 74 ++--
R/spotFuncStartSixHump.R | 69 ++-
R/spotFuncStartSphere.R | 65 ++-
R/spotGenerateSequentialDesign.R | 12
R/spotGetOptions.R | 124 ++----
R/spotHelpFunctions.R | 114 ++++--
R/spotPlot.R | 6
R/spotPredictLmOptim.R | 26 -
R/spotPrepareData.R | 25 -
R/spotReportDefault.R | 13
R/spotReportSens.R | 59 ++-
Rplots.pdf | 4
demo/spotDemo01TreeBranin.R | 2
demo/spotDemo02RandomForestBranin.R | 2
demo/spotDemo03LmBranin.R | 2
demo/spotDemo04MlegpBranin.R | 2
demo/spotDemo05TgpBranin.R | 2
demo/spotDemo06TreeSann.R | 2
demo/spotDemo07RandomForestSann.R | 2
demo/spotDemo08LmSann.R | 2
demo/spotDemo09MlegpSann.R | 2
demo/spotDemo10TgpSann.R | 2
demo/spotDemo11Java.R | 2
demo/spotDemo12Sann.R | 2
demo/spotDemo14LmOptimSann.R | 2
demo/spotDemo16EsBranin.R | 2
inst/GUI/spotGui.jar |binary
inst/demo01TreeBranin/demo01TreeBranin.conf | 2
inst/demo02RandomForestBranin/demo02RandomForestBranin.conf | 2
inst/demo03LmBranin/demo03LmBranin.conf | 2
inst/demo04MlegpBranin/demo04MlegpBranin.conf | 2
inst/demo05TgpBranin/demo05TgpBranin.conf | 2
inst/demo06TreeSann/demo06TreeSann.conf | 2
inst/demo07RandomForestSann/demo07RandomForestSann.conf | 2
inst/demo08LmSann/demo08LmSann.conf | 2
inst/demo09MlegpSann/demo09MlegpSann.conf | 2
inst/demo10TgpSann/demo10TgpSann.conf | 2
inst/demo11Java/bin/spotAlgStartOnePlusOneEsJava.R | 70 ++-
inst/demo11Java/demo11Java.conf | 2
inst/demo12Sann/sann0001.conf | 2
inst/demo13RandomForestMlegpSann/demo13RandomForestMlegpSann.conf | 2
inst/demo14LmOptimSann/demo14LmOptimSann.conf | 2
inst/demo16EsBranin/es1.conf | 3
inst/doc/SPOT.Rnw | 43 +-
inst/doc/SPOT.pdf |binary
inst/doc/SPOTmanual.pdf |binary
man/SPOT-package.Rd | 4
man/spot.Rd | 9
man/spotAlgEs.Rd | 13
man/spotAlgEsGetSuccessRate.Rd | 2
man/spotAlgEsIndividualInitial.Rd | 2
man/spotAlgStartEs.Rd | 14
man/spotAlgStartSann.Rd | 14
man/spotFuncStartBranin.Rd | 14
man/spotFuncStartSixHump.Rd | 14
man/spotFuncStartSphere.Rd | 14
man/spotGenerateSequentialDesign.Rd | 2
man/spotGetOptions.Rd | 4
man/spotPrepare.Rd | 9
67 files changed, 791 insertions(+), 533 deletions(-)
Title: Global optimization by differential evolution
Diff between DEoptim versions 2.0-6 dated 2010-08-25 and 2.0-7 dated 2010-10-15
Description: This package provides the DEoptim function which performs
global optimization by differential evolution.
Author: David Ardia, Katharine Mullen, Brian Peterson, Joshua Ulrich
Maintainer: Katharine Mullen
CHANGES |only
DESCRIPTION | 8
NEWS | 8
R/DEoptim.R | 18 -
R/zzz.R |only
THANKS | 6
demo |only
inst/CITATION | 39 +-
inst/doc |only
man/DEoptim-methods.Rd | 44 ++-
man/DEoptim.Rd | 256 ++++++++++++-----
man/DEoptim.control.Rd | 168 +++++++----
man/SMI.Rd | 16 -
man/xrrData.Rd | 17 -
src/de4_0.c | 715 ++++++++++++++++++++++++-------------------------
src/evaluate.c | 23 -
16 files changed, 762 insertions(+), 556 deletions(-)