Title: Global optimization by differential evolution
Description: This package provides the DEoptim function which performs
global optimization by differential evolution.
Author: David Ardia, Katharine Mullen, Brian Peterson, Joshua Ulrich
Maintainer: Katharine Mullen
Diff between DEoptim versions 2.0-7 dated 2010-10-15 and 2.0-8 dated 2011-01-12
DEoptim-2.0-7/DEoptim/CHANGES |only DEoptim-2.0-8/DEoptim/COPYRIGHTS | 5 DEoptim-2.0-8/DEoptim/DESCRIPTION | 6 - DEoptim-2.0-8/DEoptim/NEWS | 30 +++++ DEoptim-2.0-8/DEoptim/R/DEoptim.R | 5 DEoptim-2.0-8/DEoptim/README | 3 DEoptim-2.0-8/DEoptim/THANKS | 3 DEoptim-2.0-8/DEoptim/src/de4_0.c | 181 +++++++++++++---------------------- DEoptim-2.0-8/DEoptim/src/evaluate.c | 10 - 9 files changed, 112 insertions(+), 131 deletions(-)
Title: qgraph
Description: The qgraph package can be used to visualize psychometric
data by using networks. (see URL).
Author: Sacha Epskamp, Angelique O. J. Cramer, Lourens J. Waldorp,
Verena D. Schmittmann and Denny Borsboom
Maintainer: Sacha Epskamp
Diff between qgraph versions 0.4.1 dated 2011-01-08 and 0.4.2 dated 2011-01-12
qgraph-0.4.1/qgraph/man/.Rd2dvi1532 |only qgraph-0.4.1/qgraph/man/.Rd2dvi2032 |only qgraph-0.4.1/qgraph/man/.Rd2dvi4352 |only qgraph-0.4.1/qgraph/man/.Rd2dvi6032 |only qgraph-0.4.2/qgraph/DESCRIPTION | 19 - qgraph-0.4.2/qgraph/NAMESPACE | 2 qgraph-0.4.2/qgraph/NEWS |only qgraph-0.4.2/qgraph/R/qgraph.R | 106 +++++------ qgraph-0.4.2/qgraph/R/qgraph_Efa.R | 4 qgraph-0.4.2/qgraph/R/qgraph_arrow.R |only qgraph-0.4.2/qgraph/R/qgraph_layout.R | 8 qgraph-0.4.2/qgraph/R/qgraph_loadings.R | 41 +++- qgraph-0.4.2/qgraph/R/qgraph_pca.R | 4 qgraph-0.4.2/qgraph/R/qgraph_sem.R | 1 qgraph-0.4.2/qgraph/R/qgraph_svg.R |only qgraph-0.4.2/qgraph/man/qgraph.Rd | 15 - qgraph-0.4.2/qgraph/man/qgraph.arrow.Rd |only qgraph-0.4.2/qgraph/man/qgraph.layout.fruchtermanreingold.Rd | 8 qgraph-0.4.2/qgraph/man/qgraph_efa.Rd | 17 + qgraph-0.4.2/qgraph/man/qgraph_loadings.Rd | 21 ++ qgraph-0.4.2/qgraph/man/qgraph_pca.Rd | 22 +- qgraph-0.4.2/qgraph/man/qgraph_sem.Rd | 7 qgraph-0.4.2/qgraph/man/qgraph_svg.Rd |only 23 files changed, 180 insertions(+), 95 deletions(-)
Title: Simultaneous Comparisons for Multiple Endpoints
Description: Simultaneous tests and confidence intervals for one-way
experimental designs with one or many normally distributed,
primary response variables (endpoints). The procedure of Hasler
and Hothorn (2011) is applied for differences or ratios of
means. Various contrasts can be chosen, unbalanced sample sizes
are allowed as well as heterogeneous variances or covariance
matrices.
Author: Mario Hasler
Maintainer: Mario Hasler
Diff between SimComp versions 1.4.5 dated 2010-12-16 and 1.5.0 dated 2011-01-12
DESCRIPTION | 8 ++++---- R/SimCiDiffHet.R | 6 +++--- R/SimCiDiffHom.R | 6 +++--- R/SimCiRatHet.R | 6 +++--- R/SimCiRatHom.R | 6 +++--- man/SimCiDiff.Rd | 2 +- man/SimCiRat.Rd | 2 +- man/SimComp-package.Rd | 6 +++--- man/SimTestDiff.Rd | 2 +- man/SimTestRat.Rd | 2 +- man/coagulation.Rd | 2 +- 11 files changed, 24 insertions(+), 24 deletions(-)
Title: Relative survival
Description: Various functions for relative survival analysis.
Author: Maja Pohar Perme
Maintainer: Maja Pohar Perme
Diff between relsurv versions 1.6 dated 2010-06-01 and 1.6.2 dated 2011-01-12
DESCRIPTION | 10 - R/Rcode.r | 329 ++++++++++++++++++++++++++++------------------------- R/rssurvrsadd.r | 32 +---- man/invtime.Rd | 2 man/rsadd.Rd | 2 man/rssurv.Rd | 9 - man/rssurvrsadd.Rd |only 7 files changed, 197 insertions(+), 187 deletions(-)
Title: Toolkit implementation of the gWidgets API for use with web
pages
Description: Port of the gWidgets API to program dynamic websites. Can
be used with R's dynamic help web server to serve local files.
This provides a convenient means to make local GUIs for users
without concern for external GUI toolkits. Also, in combination
with RApache,
http://biostat.mc.vanderbilt.edu/rapache/index.html, this
framework can be used to make public websites powered by R. The
Ext JavaScript libararies (www.extjs.com) are used to create
and manipulate the widgets dynamically.
Author: John Verzani
Maintainer: John Verzani
Diff between gWidgetsWWW versions 0.0-21 dated 2010-09-02 and 0.0-22 dated 2011-01-12
gWidgetsWWW-0.0-21/gWidgetsWWW/R/common.R |only gWidgetsWWW-0.0-21/gWidgetsWWW/inst/Examples/ex-ggooglemaps.R |only gWidgetsWWW-0.0-21/gWidgetsWWW/inst/basehtml/index.gWWW |only gWidgetsWWW-0.0-21/gWidgetsWWW/inst/basehtml/makeIndex.R |only gWidgetsWWW-0.0-21/gWidgetsWWW/inst/javascript/processing.js |only gWidgetsWWW-0.0-21/gWidgetsWWW/inst/templates/RApache.conf |only gWidgetsWWW-0.0-22/gWidgetsWWW/ChangeLog | 142 gWidgetsWWW-0.0-22/gWidgetsWWW/DESCRIPTION | 10 gWidgetsWWW-0.0-22/gWidgetsWWW/NAMESPACE | 9 gWidgetsWWW-0.0-22/gWidgetsWWW/NEWS | 33 gWidgetsWWW-0.0-22/gWidgetsWWW/R/LocalVersion.R | 720 gWidgetsWWW-0.0-22/gWidgetsWWW/R/aaa.R | 2106 +- gWidgetsWWW-0.0-22/gWidgetsWWW/R/dialogs.R | 152 gWidgetsWWW-0.0-22/gWidgetsWWW/R/gaction.R | 122 gWidgetsWWW-0.0-22/gWidgetsWWW/R/gbigtable.R |only gWidgetsWWW-0.0-22/gWidgetsWWW/R/gbutton.R | 42 gWidgetsWWW-0.0-22/gWidgetsWWW/R/gcalendar.R | 52 gWidgetsWWW-0.0-22/gWidgetsWWW/R/gcanvas.R | 28 gWidgetsWWW-0.0-22/gWidgetsWWW/R/gcheckbox.R | 105 gWidgetsWWW-0.0-22/gWidgetsWWW/R/gcheckboxgroup.R | 399 gWidgetsWWW-0.0-22/gWidgetsWWW/R/gcombobox.R | 164 gWidgetsWWW-0.0-22/gWidgetsWWW/R/gcommandline.R | 16 gWidgetsWWW-0.0-22/gWidgetsWWW/R/gdf.R | 119 gWidgetsWWW-0.0-22/gWidgetsWWW/R/gedit.R | 30 gWidgetsWWW-0.0-22/gWidgetsWWW/R/gfile.R | 136 gWidgetsWWW-0.0-22/gWidgetsWWW/R/gformlayout.R | 15 gWidgetsWWW-0.0-22/gWidgetsWWW/R/ggooglemaps.R | 33 gWidgetsWWW-0.0-22/gWidgetsWWW/R/ggroup.R | 79 gWidgetsWWW-0.0-22/gWidgetsWWW/R/ghtml.R | 70 gWidgetsWWW-0.0-22/gWidgetsWWW/R/gimage.R | 48 gWidgetsWWW-0.0-22/gWidgetsWWW/R/glabel.R | 71 gWidgetsWWW-0.0-22/gWidgetsWWW/R/glayout.R | 92 gWidgetsWWW-0.0-22/gWidgetsWWW/R/gmenu.R | 27 gWidgetsWWW-0.0-22/gWidgetsWWW/R/gnotebook.R | 102 gWidgetsWWW-0.0-22/gWidgetsWWW/R/gpanedgroup.R | 15 gWidgetsWWW-0.0-22/gWidgetsWWW/R/gprocessingjs.R | 102 gWidgetsWWW-0.0-22/gWidgetsWWW/R/gradio.R | 68 gWidgetsWWW-0.0-22/gWidgetsWWW/R/gseparator.R | 15 gWidgetsWWW-0.0-22/gWidgetsWWW/R/gslider.R | 58 gWidgetsWWW-0.0-22/gWidgetsWWW/R/gspinbutton.R | 66 gWidgetsWWW-0.0-22/gWidgetsWWW/R/gstatusbar.R | 79 gWidgetsWWW-0.0-22/gWidgetsWWW/R/gsvg.R | 58 gWidgetsWWW-0.0-22/gWidgetsWWW/R/gtable.R | 301 gWidgetsWWW-0.0-22/gWidgetsWWW/R/gtext.R | 40 gWidgetsWWW-0.0-22/gWidgetsWWW/R/gtree.R |only gWidgetsWWW-0.0-22/gWidgetsWWW/R/gwebvis.R | 20 gWidgetsWWW-0.0-22/gWidgetsWWW/R/gwindow.R | 556 gWidgetsWWW-0.0-22/gWidgetsWWW/R/icons.R | 23 gWidgetsWWW-0.0-22/gWidgetsWWW/R/string.R |only gWidgetsWWW-0.0-22/gWidgetsWWW/R/utils.R |only gWidgetsWWW-0.0-22/gWidgetsWWW/R/www-utils.R |only gWidgetsWWW-0.0-22/gWidgetsWWW/TODO.txt | 49 gWidgetsWWW-0.0-22/gWidgetsWWW/inst/Examples/brew-gWidgets.brew | 11 gWidgetsWWW-0.0-22/gWidgetsWWW/inst/Examples/ex-actions.R | 15 gWidgetsWWW-0.0-22/gWidgetsWWW/inst/Examples/ex-add-widget-dynamically.R | 8 gWidgetsWWW-0.0-22/gWidgetsWWW/inst/Examples/ex-buttons.R | 9 gWidgetsWWW-0.0-22/gWidgetsWWW/inst/Examples/ex-canvas.R | 28 gWidgetsWWW-0.0-22/gWidgetsWWW/inst/Examples/ex-clt.R | 114 gWidgetsWWW-0.0-22/gWidgetsWWW/inst/Examples/ex-editdata.R | 3 gWidgetsWWW-0.0-22/gWidgetsWWW/inst/Examples/ex-form.R | 5 gWidgetsWWW-0.0-22/gWidgetsWWW/inst/Examples/ex-gcombobox.R | 4 gWidgetsWWW-0.0-22/gWidgetsWWW/inst/Examples/ex-ggplot2.R | 344 gWidgetsWWW-0.0-22/gWidgetsWWW/inst/Examples/ex-ghtml.R | 79 gWidgetsWWW-0.0-22/gWidgetsWWW/inst/Examples/ex-gprocessingjs.R | 121 gWidgetsWWW-0.0-22/gWidgetsWWW/inst/Examples/ex-gtable.R | 5 gWidgetsWWW-0.0-22/gWidgetsWWW/inst/Examples/ex-helloworld.R | 4 gWidgetsWWW-0.0-22/gWidgetsWWW/inst/Examples/ex-image.R | 33 gWidgetsWWW-0.0-22/gWidgetsWWW/inst/Examples/ex-index.R | 96 gWidgetsWWW-0.0-22/gWidgetsWWW/inst/Examples/ex-layouts.R | 2 gWidgetsWWW-0.0-22/gWidgetsWWW/inst/Examples/ex-simple-gui.R | 16 gWidgetsWWW-0.0-22/gWidgetsWWW/inst/Examples/ex-survey.R | 78 gWidgetsWWW-0.0-22/gWidgetsWWW/inst/Examples/ex-svg.R | 87 gWidgetsWWW-0.0-22/gWidgetsWWW/inst/Examples/ex-t-test.R | 27 gWidgetsWWW-0.0-22/gWidgetsWWW/inst/Examples/ex-widgets.R | 19 gWidgetsWWW-0.0-22/gWidgetsWWW/inst/Examples/ex-windows.R | 19 gWidgetsWWW-0.0-22/gWidgetsWWW/inst/Tests |only gWidgetsWWW-0.0-22/gWidgetsWWW/inst/apps |only gWidgetsWWW-0.0-22/gWidgetsWWW/inst/basehtml/ext/adapter/ext/ext-base.js | 6 gWidgetsWWW-0.0-22/gWidgetsWWW/inst/basehtml/ext/examples |only gWidgetsWWW-0.0-22/gWidgetsWWW/inst/basehtml/ext/ext-all.js | 8 gWidgetsWWW-0.0-22/gWidgetsWWW/inst/basehtml/ext/license.txt | 83 gWidgetsWWW-0.0-22/gWidgetsWWW/inst/basehtml/ext/resources/css/ext-all.css |10110 ++++------ gWidgetsWWW-0.0-22/gWidgetsWWW/inst/basehtml/gWidgetsWWW.js | 9 gWidgetsWWW-0.0-22/gWidgetsWWW/inst/basehtml/images/blank.gif |only gWidgetsWWW-0.0-22/gWidgetsWWW/inst/doc/gWidgetsWWW.Rnw | 240 gWidgetsWWW-0.0-22/gWidgetsWWW/inst/doc/gWidgetsWWW.pdf |binary gWidgetsWWW-0.0-22/gWidgetsWWW/inst/javascript/GMapPanel.js | 1 gWidgetsWWW-0.0-22/gWidgetsWWW/inst/javascript/README | 5 gWidgetsWWW-0.0-22/gWidgetsWWW/inst/javascript/compress.R |only gWidgetsWWW-0.0-22/gWidgetsWWW/inst/javascript/ext.ux.example.js | 1 gWidgetsWWW-0.0-22/gWidgetsWWW/inst/javascript/ext.ux.form.fileuploadfield.js | 96 gWidgetsWWW-0.0-22/gWidgetsWWW/inst/javascript/ext.ux.labelbox.js |only gWidgetsWWW-0.0-22/gWidgetsWWW/inst/javascript/ext.ux.statusbar.js | 44 gWidgetsWWW-0.0-22/gWidgetsWWW/inst/javascript/gw-gtable.js |only gWidgetsWWW-0.0-22/gWidgetsWWW/inst/javascript/processing-0.9.1.js | 2 gWidgetsWWW-0.0-22/gWidgetsWWW/inst/javascript/processinginit.js | 1 gWidgetsWWW-0.0-22/gWidgetsWWW/inst/scripts/gWidgetsWWWAJAX.R | 338 gWidgetsWWW-0.0-22/gWidgetsWWW/inst/scripts/gWidgetsWWWrun.R | 165 gWidgetsWWW-0.0-22/gWidgetsWWW/inst/scripts/session.R | 11 gWidgetsWWW-0.0-22/gWidgetsWWW/inst/templates/RApache-gWidgetsWWW.conf |only gWidgetsWWW-0.0-22/gWidgetsWWW/inst/templates/README |only gWidgetsWWW-0.0-22/gWidgetsWWW/man/gWidgetsWWW-package.Rd | 299 gWidgetsWWW-0.0-22/gWidgetsWWW/man/gWidgetsWWW-undocumented.Rd | 2 gWidgetsWWW-0.0-22/gWidgetsWWW/man/gw_browseEnv.Rd |only gWidgetsWWW-0.0-22/gWidgetsWWW/man/gw_package.Rd |only gWidgetsWWW-0.0-22/gWidgetsWWW/man/localServerStart.Rd | 2 106 files changed, 10941 insertions(+), 7981 deletions(-)
Title: R Interface to the Protocol Buffers API
Description: Protocol Buffers are a way of encoding structured data in
an efficient yet extensible format. Google uses Protocol
Buffers for almost all of its internal RPC protocols and file
formats.
Author: Romain Francois
Maintainer: Romain and Dirk
Diff between RProtoBuf versions 0.2.1 dated 2010-10-18 and 0.2.2 dated 2011-01-12
ChangeLog | 35 DESCRIPTION | 8 R/00classes.R | 11 R/internals.R | 7 R/wrapper_EnumDescriptor.R | 6 inst/NEWS | 12 inst/THANKS |only inst/doc/Makefile | 4 inst/doc/RProtoBuf-quickref.pdf |binary inst/doc/RProtoBuf-unitTests.pdf |binary inst/doc/RProtoBuf.pdf | 2362 +++++++++----------- inst/doc/unitTests-results/RProtoBuf-unitTests.html | 20 inst/doc/unitTests-results/RProtoBuf-unitTests.txt | 23 inst/unitTests/runit.addressbook.R | 11 inst/unitTests/runit.enums.R |only inst/unitTests/runit.golden.message.R | 7 inst/unitTests/runit.import.R |only man/EnumDescriptor-class.Rd | 42 man/EnumValueDescriptor-class.Rd | 23 man/readProtoFiles.Rd | 3 src/DescriptorPoolLookup.cpp | 26 src/S4_classes.h | 6 src/wrapper_EnumDescriptor.cpp | 25 src/wrapper_EnumValueDescriptor.cpp | 25 24 files changed, 1357 insertions(+), 1299 deletions(-)