Thu, 26 May 2011

Package smacof updated to version 1.2-0 with previous version 1.1-3 dated 2011-03-16

Title: SMACOF for Multidimensional Scaling.
Description: This package provides the following approaches of multidimensional scaling (MDS) based on stress minimization by means of majorization (smacof): Simple smacof on symmetric dissimilarity matrices, smacof for rectangular matrices (unfolding models), smacof with constraints on the configuration, three-way smacof for individual differences (including constraints for idioscal, indscal, and identity), and spherical smacof (primal and dual algorithm). Each of these approaches is implemented in a metric and nonmetric manner including primary, secondary, and tertiary approaches for tie handling. Jackknife and permutation tests are included as well.
Author: Jan de Leeuw, Patrick Mair
Maintainer: Jan de Leeuw

Diff between smacof versions 1.1-3 dated 2011-03-16 and 1.2-0 dated 2011-05-26

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 45 files changed, 215 insertions(+), 99 deletions(-)

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Package arulesViz updated to version 0.1-3 with previous version 0.1-2 dated 2011-05-24

Title: arulesViz - Visualizing Association Rules and Frequent Itemsets
Description: Various visualization techniques for association rules and itemsets. The packages also includes several interactive visualizations for rule exploration. This package extends package arules.
Author: Michael Hahsler and Sudheer Chelluboina
Maintainer: Michael Hahsler

Diff between arulesViz versions 0.1-2 dated 2011-05-24 and 0.1-3 dated 2011-05-26

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 11 files changed, 609 insertions(+), 597 deletions(-)

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Package TSP updated to version 1.0-3 with previous version 1.0-2 dated 2011-01-14

Title: Traveling Salesperson Problem (TSP)
Description: Basic infrastructure and some algorithms for the traveling salesperson problem (also traveling salesman problem; TSP). The package provides some simple algorithms and an interface to Concorde, the currently fastest TSP solver. Concorde itself is not included in the package and has to be obtained separately.
Author: Michael Hahsler and Kurt Hornik
Maintainer: Michael Hahsler

Diff between TSP versions 1.0-2 dated 2011-01-14 and 1.0-3 dated 2011-05-26

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Package RSEIS updated to version 2.5-10 with previous version 2.5-8 dated 2011-03-31

Title: Seismic Time Series Analysis Tools
Description: Multiple interactive codes to view and analyze seismic data, via spectrum analysis, wavelet transforms, particle motion, hodograms. Includes general time-series tools, plotting, filtering, interactive display.
Author: Jonathan M. Lees
Maintainer: Jonathan M. Lees

Diff between RSEIS versions 2.5-8 dated 2011-03-31 and 2.5-10 dated 2011-05-26

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Package RFOC updated to version 2.0-00 with previous version 1.1-0.1 dated 2011-02-18

Title: Graphics for Spherical Distributions and Earthquake Focal Mechanisms
Description: Graphics for statistics on a sphere, as applied to geological fault data, crystalogaphy, earthquake focal mechanisms, radiation patterns, ternary plots and geographical/geological maps.
Author: Jonathan M. Lees
Maintainer: Jonathan M. Lees

Diff between RFOC versions 1.1-0.1 dated 2011-02-18 and 2.0-00 dated 2011-05-26

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Package GEOmap updated to version 1.6-00 with previous version 1.5-13 dated 2011-03-30

Title: Topographic and Geologic Mapping
Description: Set of routines for making Map Projections (forward and inverse), Topographic Maps, Perspective plots, Geological Maps, geological map symbols, geological databases, interactive plotting and selection of focus regions.
Author: Jonathan M. Lees
Maintainer: Jonathan M. Lees

Diff between GEOmap versions 1.5-13 dated 2011-03-30 and 1.6-00 dated 2011-05-26

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Package msm updated to version 1.0.1 with previous version 1.0 dated 2010-11-25

Title: Multi-state Markov and hidden Markov models in continuous time
Description: Functions for fitting general continuous-time Markov and hidden Markov multi-state models to longitudinal data. Both Markov transition rates and the hidden Markov output process can be modelled in terms of covariates, which may be constant or piecewise-constant in time. A variety of observation schemes are supported, including processes observed at arbitrary times (panel data), continuously-observed processes, and censored states.
Author: Christopher Jackson
Maintainer: Christopher Jackson

Diff between msm versions 1.0 dated 2010-11-25 and 1.0.1 dated 2011-05-26

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Package mixsep updated to version 0.1-5 with previous version 0.1-4 dated 2011-05-06

Title: Forensic Genetics DNA Mixture Separation
Description: Separates DNA mixtures using a statistical model within a greedy algorithm.
Author: Torben Tvedebrink
Maintainer: Torben Tvedebrink

Diff between mixsep versions 0.1-4 dated 2011-05-06 and 0.1-5 dated 2011-05-26

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 4 files changed, 64 insertions(+), 26 deletions(-)

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Package gRapHD updated to version 0.2.2 with previous version 0.2.1 dated 2011-04-26

Title: Efficient selection of undirected graphical models for high-dimensional datasets
Description: gRapHD is designed for efficient selection of high-dimensional undirected graphical models. The package provides tools for selecting trees, forests and decomposable models minimizing information criteria such as AIC or BIC, and for displaying the independence graphs of the models. It has also some useful tools for analysing graphical structures. It supports the use of discrete, continuous, or both types of variables.
Author: Gabriel Coelho Goncalves de Abreu , Rodrigo Labouriau , David Edwards .
Maintainer: Gabriel Coelho Goncalves de Abreu

Diff between gRapHD versions 0.2.1 dated 2011-04-26 and 0.2.2 dated 2011-05-26

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Package gtcorr updated to version 0.2-1 with previous version 0.1-2 dated 2011-05-13

Title: Calculate efficiencies of group testing algorithms with correlated responses
Description: This package provides functions to calculate the efficiencies (expected tests per unit) of hierarchical and matrix group testing procedures. Efficiencies can be calculated in the presense of correlated responses under multiple arrangements of clustesrs. Efficiencies can also be evaluated in the presense of test error.
Author: Sam Lendle
Maintainer: Sam Lendle

Diff between gtcorr versions 0.1-2 dated 2011-05-13 and 0.2-1 dated 2011-05-26

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Package gMCP updated to version 0.6-5 with previous version 0.6-4 dated 2011-05-11

Title: A graphical approach to sequentially rejective multiple test procedures
Description: This package provides functions and a graphical user interface for graphical described multiple test procedures.
Author: Kornelius Rohmeyer, Florian Klinglmueller
Maintainer: Kornelius Rohmeyer

Diff between gMCP versions 0.6-4 dated 2011-05-11 and 0.6-5 dated 2011-05-26

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 gMCP-0.6-5/gMCP/INSTALL                                                         |   18 +---
 gMCP-0.6-5/gMCP/NAMESPACE                                                       |    1 
 gMCP-0.6-5/gMCP/NEWS                                                            |   22 ++++
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 gMCP-0.6-5/gMCP/R/startGUIs.R                                                   |    2 
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Package eyetracking updated to version 1.1 with previous version 1.0 dated 2011-05-26

Title: Eyetracking Helper Functions
Description: Misc function for working with eyetracking data
Author: Ryan M. Hope
Maintainer: Ryan M. Hope

Diff between eyetracking versions 1.0 dated 2011-05-26 and 1.1 dated 2011-05-26

 DESCRIPTION                |    6 +++---
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Package dplR updated to version 1.4.1 with previous version 1.4.0 dated 2011-05-20

Title: Dendrochronology Program Library in R
Description: This package contains functions for performing some standard tree-ring analyses.
Author: Andy Bunn with contributions from Mikko Korpela, Franco Biondi, and Christian Zang
Maintainer: Andy Bunn

Diff between dplR versions 1.4.0 dated 2011-05-20 and 1.4.1 dated 2011-05-26

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Package bayesQR updated to version 1.2 with previous version 1.1 dated 2011-05-11

Title: Bayesian quantile regression
Description: Bayesian quantile regression using the asymmetric Laplace distribution, both continuous as well as binary dependent variables are supported. The package consists of implementations of the methods of Yu & Moyeed (2001) and Benoit & Van den Poel (2011).
Author: Dries F. Benoit, Rahim Al-Hamzawi, Keming Yu, Dirk Van den Poel
Maintainer: Dries F. Benoit

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Permanent link

Package analogue updated to version 0.7-0 with previous version 0.6-23 dated 2010-03-13

Title: Analogue and weighted averaging methods for palaeoecology
Description: Fits Modern Analogue Technique and Weighted Averaging transfer function models for prediction of environmental data from species data, and related methods used in palaeoecology.
Author: Gavin L. Simpson, Jari Oksanen
Maintainer: Gavin L. Simpson

Diff between analogue versions 0.6-23 dated 2010-03-13 and 0.7-0 dated 2011-05-26

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Package XLConnectJars updated to version 0.1-1 with previous version 0.1-0 dated 2011-02-27

Title: JAR dependencies for the XLConnect package
Description: This package provides external JAR dependencies for the XLConnect package
Author: Mirai Solutions GmbH
Maintainer: Mirai Solutions GmbH

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Package XLConnect updated to version 0.1-4 with previous version 0.1-3 dated 2011-02-27

Title: Excel Connector for R
Description: Manipulate Excel files from R
Author: Mirai Solutions GmbH
Maintainer: Mirai Solutions GmbH

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More information about XLConnect at CRAN
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Package DeducerPlugInScaling updated to version 0.0-7 with previous version 0.0-6 dated 2010-10-04

Title: Reliability and factor analysis plugin
Description: A Deducer plug-in for factor analysis and reliability analysis, using psych, GPArotation and mvnormtest packages.
Author: Alberto Mirisola and Ian Fellows
Maintainer: Alberto Mirisola

Diff between DeducerPlugInScaling versions 0.0-6 dated 2010-10-04 and 0.0-7 dated 2011-05-26

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More information about DeducerPlugInScaling at CRAN
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Package wnominate updated to version 0.95 with previous version 0.94 dated 2007-09-01

Title: WNOMINATE Roll Call Analysis Software.
Description: Estimates Poole and Rosenthal W-NOMINATE scores from roll call votes supplied though a 'rollcall' object from package 'pscl'.
Author: Keith Poole , Jeffrey Lewis , James Lo and Royce Carroll
Maintainer: Jeffrey Lewis

Diff between wnominate versions 0.94 dated 2007-09-01 and 0.95 dated 2011-05-26

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Package unknownR updated to version 0.3 with previous version 0.2 dated 2011-04-24

Title: You didn't know you didn't know?
Description: Utility to quickly find useful functions in R that you didn't know you didn't know.
Author: Matthew Dowle
Maintainer: Matthew Dowle

Diff between unknownR versions 0.2 dated 2011-04-24 and 0.3 dated 2011-05-26

 DESCRIPTION |    6 +++---
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Package svd updated to version 0.2 with previous version 0.1 dated 2011-03-14

Title: Interfaces to various state-of-art SVD and eigensolvers
Description: This package provides various R bindings to various SVD and eigensolvers (PROPACK, nuTRLan)
Author: Anton Korobeynikov
Maintainer: Anton Korobeynikov

Diff between svd versions 0.1 dated 2011-03-14 and 0.2 dated 2011-05-26

 DESCRIPTION               |    8 ++++----
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New package mRm with initial version 1.0
Package: mRm
Type: Package
Title: mRm: An R package for conditional maximum likelihood estimation in mixed Rasch models.
Version: 1.0
Date: 2011-05-26
Author: David Preinerstorfer
Maintainer: David Preinerstorfer
Description: Conditional maximum likelihood estimation via the EM algorithm and information-criterion-based model selection in binary mixed Rasch models.
License: GPL-2
Packaged: 2011-05-25 23:59:04 UTC; preines
Repository: CRAN
Date/Publication: 2011-05-26 05:32:38

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Package arm updated to version 1.4-11 with previous version 1.4-10.01 dated 2011-05-11

Title: Data Analysis Using Regression and Multilevel/Hierarchical Models
Description: R functions for processing lm, glm, mer and polr outputs.
Author: Andrew Gelman , Yu-Sung Su , Masanao Yajima , Jennifer Hill , Maria Grazia Pittau , Jouni Kerman and Tian Zheng
Maintainer: Yu-Sung Su

Diff between arm versions 1.4-10.01 dated 2011-05-11 and 1.4-11 dated 2011-05-26

 CHANGELOG    |    4 ++++
 DESCRIPTION  |    8 ++++----
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New package eyetracking with initial version 1.0
Package: eyetracking
Type: Package
Title: Eyetracking Helper Functions
Version: 1.0
Date: 2011-05-25
Author: Ryan M. Hope
Maintainer: Ryan M. Hope
Description: Misc function for working with eyetracking data
License: GPL-3
LazyLoad: yes
Packaged: 2011-05-25 22:43:04 UTC; ryan
Repository: CRAN
Date/Publication: 2011-05-26 05:32:33

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Package anesrake updated to version 0.70 with previous version 0.65 dated 2011-04-28

Title: ANES Raking Implementation
Description: This package provides a comprehensive system for selecting variables and weighting data to match the specifications of the American National Election Studies. The package includes methods for identifying discrepant variables, raking data, and assessing the effects of the raking algorithm. It also allows automated re-raking if target variables fall outside identified bounds and allows greater user specification than other available raking algorithms. A variety of simple weighted statistics that were previously in this package (version .55 and earlier) have been moved to the package 'weights.'
Author: Josh Pasek
Maintainer: Josh Pasek

Diff between anesrake versions 0.65 dated 2011-04-28 and 0.70 dated 2011-05-26

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Package RcppArmadillo updated to version 0.2.20 with previous version 0.2.19 dated 2011-04-24

Title: Rcpp integration for Armadillo templated linear algebra library
Description: R and Armadillo integration using Rcpp Armadillo is a templated C++ linear algebra library (by Conrad Sanderson) that aims towards a good balance between speed and ease of use. Integer, floating point and complex numbers are supported, as well as a subset of trigonometric and statistics functions. Various matrix decompositions are provided through optional integration with LAPACK and ATLAS libraries. A delayed evaluation approach is employed (during compile time) to combine several operations into one, and to reduce (or eliminate) the need for temporaries. This is accomplished through recursive templates and template meta-programming. This library is useful if C++ has been decided as the language of choice (due to speed and/or integration capabilities), rather than another language. The RcppArmadillo package includes the header files from the templated Armadillo library (currently version 1.99.2). Thus users do not need to install Armadillo itself in order to use RcppArmadillo. This Armadillo integration provides a nice illustration of the capabilities of the Rcpp package for seamless R and C++ integration. Armadillo is licensed under the GNU LGPL version 3 or later, while RcppArmadillo (the Rcpp bindings/bridge to Armadillo) is licenses under the GNU GPL version 2 or later, as is the rest of Rcpp.
Author: Romain Francois, Dirk Eddelbuettel and Doug Bates
Maintainer: Romain Francois, Dirk Eddelbuettel and Doug Bates

Diff between RcppArmadillo versions 0.2.19 dated 2011-04-24 and 0.2.20 dated 2011-05-26

 RcppArmadillo-0.2.19/RcppArmadillo/inst/include/armadillo_bits/Col_proto.hpp              |only
 RcppArmadillo-0.2.19/RcppArmadillo/inst/include/armadillo_bits/Cube_proto.hpp             |only
 RcppArmadillo-0.2.19/RcppArmadillo/inst/include/armadillo_bits/GlueCube_proto.hpp         |only
 RcppArmadillo-0.2.19/RcppArmadillo/inst/include/armadillo_bits/Glue_proto.hpp             |only
 RcppArmadillo-0.2.19/RcppArmadillo/inst/include/armadillo_bits/Mat_proto.hpp              |only
 RcppArmadillo-0.2.19/RcppArmadillo/inst/include/armadillo_bits/OpCube_proto.hpp           |only
 RcppArmadillo-0.2.19/RcppArmadillo/inst/include/armadillo_bits/Op_proto.hpp               |only
 RcppArmadillo-0.2.19/RcppArmadillo/inst/include/armadillo_bits/Row_proto.hpp              |only
 RcppArmadillo-0.2.19/RcppArmadillo/inst/include/armadillo_bits/arma_ostream_proto.hpp     |only
 RcppArmadillo-0.2.19/RcppArmadillo/inst/include/armadillo_bits/arrayops_proto.hpp         |only
 RcppArmadillo-0.2.19/RcppArmadillo/inst/include/armadillo_bits/atlas_proto.hpp            |only
 RcppArmadillo-0.2.19/RcppArmadillo/inst/include/armadillo_bits/auxlib_proto.hpp           |only
 RcppArmadillo-0.2.19/RcppArmadillo/inst/include/armadillo_bits/blas_proto.hpp             |only
 RcppArmadillo-0.2.19/RcppArmadillo/inst/include/armadillo_bits/diagview_proto.hpp         |only
 RcppArmadillo-0.2.19/RcppArmadillo/inst/include/armadillo_bits/diskio_proto.hpp           |only
 RcppArmadillo-0.2.19/RcppArmadillo/inst/include/armadillo_bits/eGlueCube_proto.hpp        |only
 RcppArmadillo-0.2.19/RcppArmadillo/inst/include/armadillo_bits/eGlue_proto.hpp            |only
 RcppArmadillo-0.2.19/RcppArmadillo/inst/include/armadillo_bits/eOpCube_proto.hpp          |only
 RcppArmadillo-0.2.19/RcppArmadillo/inst/include/armadillo_bits/eOp_proto.hpp              |only
 RcppArmadillo-0.2.19/RcppArmadillo/inst/include/armadillo_bits/eglue_core_proto.hpp       |only
 RcppArmadillo-0.2.19/RcppArmadillo/inst/include/armadillo_bits/eop_core_proto.hpp         |only
 RcppArmadillo-0.2.19/RcppArmadillo/inst/include/armadillo_bits/field_proto.hpp            |only
 RcppArmadillo-0.2.19/RcppArmadillo/inst/include/armadillo_bits/fn_htrans.hpp              |only
 RcppArmadillo-0.2.19/RcppArmadillo/inst/include/armadillo_bits/forward_proto.hpp          |only
 RcppArmadillo-0.2.19/RcppArmadillo/inst/include/armadillo_bits/glue_conv_proto.hpp        |only
 RcppArmadillo-0.2.19/RcppArmadillo/inst/include/armadillo_bits/glue_cor_proto.hpp         |only
 RcppArmadillo-0.2.19/RcppArmadillo/inst/include/armadillo_bits/glue_cov_proto.hpp         |only
 RcppArmadillo-0.2.19/RcppArmadillo/inst/include/armadillo_bits/glue_cross_proto.hpp       |only
 RcppArmadillo-0.2.19/RcppArmadillo/inst/include/armadillo_bits/glue_join_proto.hpp        |only
 RcppArmadillo-0.2.19/RcppArmadillo/inst/include/armadillo_bits/glue_kron_proto.hpp        |only
 RcppArmadillo-0.2.19/RcppArmadillo/inst/include/armadillo_bits/glue_mixed_proto.hpp       |only
 RcppArmadillo-0.2.19/RcppArmadillo/inst/include/armadillo_bits/glue_relational_proto.hpp  |only
 RcppArmadillo-0.2.19/RcppArmadillo/inst/include/armadillo_bits/glue_solve_proto.hpp       |only
 RcppArmadillo-0.2.19/RcppArmadillo/inst/include/armadillo_bits/glue_times_proto.hpp       |only
 RcppArmadillo-0.2.19/RcppArmadillo/inst/include/armadillo_bits/glue_toeplitz_proto.hpp    |only
 RcppArmadillo-0.2.19/RcppArmadillo/inst/include/armadillo_bits/injector_proto.hpp         |only
 RcppArmadillo-0.2.19/RcppArmadillo/inst/include/armadillo_bits/lapack_proto.hpp           |only
 RcppArmadillo-0.2.19/RcppArmadillo/inst/include/armadillo_bits/mtGlueCube_proto.hpp       |only
 RcppArmadillo-0.2.19/RcppArmadillo/inst/include/armadillo_bits/mtGlue_proto.hpp           |only
 RcppArmadillo-0.2.19/RcppArmadillo/inst/include/armadillo_bits/mtOpCube_proto.hpp         |only
 RcppArmadillo-0.2.19/RcppArmadillo/inst/include/armadillo_bits/mtOp_proto.hpp             |only
 RcppArmadillo-0.2.19/RcppArmadillo/inst/include/armadillo_bits/op_chol_proto.hpp          |only
 RcppArmadillo-0.2.19/RcppArmadillo/inst/include/armadillo_bits/op_cor_proto.hpp           |only
 RcppArmadillo-0.2.19/RcppArmadillo/inst/include/armadillo_bits/op_cov_proto.hpp           |only
 RcppArmadillo-0.2.19/RcppArmadillo/inst/include/armadillo_bits/op_cumsum_proto.hpp        |only
 RcppArmadillo-0.2.19/RcppArmadillo/inst/include/armadillo_bits/op_cx_scalar_proto.hpp     |only
 RcppArmadillo-0.2.19/RcppArmadillo/inst/include/armadillo_bits/op_diagmat_proto.hpp       |only
 RcppArmadillo-0.2.19/RcppArmadillo/inst/include/armadillo_bits/op_diagvec_proto.hpp       |only
 RcppArmadillo-0.2.19/RcppArmadillo/inst/include/armadillo_bits/op_dot_proto.hpp           |only
 RcppArmadillo-0.2.19/RcppArmadillo/inst/include/armadillo_bits/op_dotext_proto.hpp        |only
 RcppArmadillo-0.2.19/RcppArmadillo/inst/include/armadillo_bits/op_find_proto.hpp          |only
 RcppArmadillo-0.2.19/RcppArmadillo/inst/include/armadillo_bits/op_flip_proto.hpp          |only
 RcppArmadillo-0.2.19/RcppArmadillo/inst/include/armadillo_bits/op_htrans_proto.hpp        |only
 RcppArmadillo-0.2.19/RcppArmadillo/inst/include/armadillo_bits/op_inv_proto.hpp           |only
 RcppArmadillo-0.2.19/RcppArmadillo/inst/include/armadillo_bits/op_max_proto.hpp           |only
 RcppArmadillo-0.2.19/RcppArmadillo/inst/include/armadillo_bits/op_mean_proto.hpp          |only
 RcppArmadillo-0.2.19/RcppArmadillo/inst/include/armadillo_bits/op_median_proto.hpp        |only
 RcppArmadillo-0.2.19/RcppArmadillo/inst/include/armadillo_bits/op_min_proto.hpp           |only
 RcppArmadillo-0.2.19/RcppArmadillo/inst/include/armadillo_bits/op_misc_proto.hpp          |only
 RcppArmadillo-0.2.19/RcppArmadillo/inst/include/armadillo_bits/op_pinv_proto.hpp          |only
 RcppArmadillo-0.2.19/RcppArmadillo/inst/include/armadillo_bits/op_princomp_cov_proto.hpp  |only
 RcppArmadillo-0.2.19/RcppArmadillo/inst/include/armadillo_bits/op_princomp_proto.hpp      |only
 RcppArmadillo-0.2.19/RcppArmadillo/inst/include/armadillo_bits/op_prod_proto.hpp          |only
 RcppArmadillo-0.2.19/RcppArmadillo/inst/include/armadillo_bits/op_relational_proto.hpp    |only
 RcppArmadillo-0.2.19/RcppArmadillo/inst/include/armadillo_bits/op_repmat_proto.hpp        |only
 RcppArmadillo-0.2.19/RcppArmadillo/inst/include/armadillo_bits/op_reshape_proto.hpp       |only
 RcppArmadillo-0.2.19/RcppArmadillo/inst/include/armadillo_bits/op_shuffle_proto.hpp       |only
 RcppArmadillo-0.2.19/RcppArmadillo/inst/include/armadillo_bits/op_sort_proto.hpp          |only
 RcppArmadillo-0.2.19/RcppArmadillo/inst/include/armadillo_bits/op_stddev_proto.hpp        |only
 RcppArmadillo-0.2.19/RcppArmadillo/inst/include/armadillo_bits/op_sum_proto.hpp           |only
 RcppArmadillo-0.2.19/RcppArmadillo/inst/include/armadillo_bits/op_trans_meat.hpp          |only
 RcppArmadillo-0.2.19/RcppArmadillo/inst/include/armadillo_bits/op_trans_proto.hpp         |only
 RcppArmadillo-0.2.19/RcppArmadillo/inst/include/armadillo_bits/op_trimat_proto.hpp        |only
 RcppArmadillo-0.2.19/RcppArmadillo/inst/include/armadillo_bits/op_var_proto.hpp           |only
 RcppArmadillo-0.2.19/RcppArmadillo/inst/include/armadillo_bits/podarray_proto.hpp         |only
 RcppArmadillo-0.2.19/RcppArmadillo/inst/include/armadillo_bits/running_stat_proto.hpp     |only
 RcppArmadillo-0.2.19/RcppArmadillo/inst/include/armadillo_bits/running_stat_vec_proto.hpp |only
 RcppArmadillo-0.2.19/RcppArmadillo/inst/include/armadillo_bits/subview_cube_proto.hpp     |only
 RcppArmadillo-0.2.19/RcppArmadillo/inst/include/armadillo_bits/subview_elem1_proto.hpp    |only
 RcppArmadillo-0.2.19/RcppArmadillo/inst/include/armadillo_bits/subview_field_proto.hpp    |only
 RcppArmadillo-0.2.19/RcppArmadillo/inst/include/armadillo_bits/subview_proto.hpp          |only
 RcppArmadillo-0.2.19/RcppArmadillo/inst/include/armadillo_bits/wall_clock_proto.hpp       |only
 RcppArmadillo-0.2.20/RcppArmadillo/ChangeLog                                              |   20 
 RcppArmadillo-0.2.20/RcppArmadillo/DESCRIPTION                                            |   10 
 RcppArmadillo-0.2.20/RcppArmadillo/inst/NEWS                                              |   26 
 RcppArmadillo-0.2.20/RcppArmadillo/inst/examples                                          |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/RcppArmadillo/Mat_meat.h                  |    8 
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo                                 |  199 -
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/Col_bones.hpp              |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/Col_meat.hpp               |  519 +++
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/Cube_bones.hpp             |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/Cube_meat.hpp              |   96 
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/GlueCube_bones.hpp         |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/Glue_bones.hpp             |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/Mat_bones.hpp              |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/Mat_meat.hpp               |  673 +++-
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/OpCube_bones.hpp           |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/Op_bones.hpp               |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/Proxy.hpp                  |   28 
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/ProxyCube.hpp              |   20 
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/Row_bones.hpp              |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/Row_meat.hpp               |  491 +++
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/arma_ostream_bones.hpp     |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/arma_ostream_meat.hpp      |   87 
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/arma_static_assert.hpp     |   31 
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/arma_version.hpp           |    6 
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/arrayops_bones.hpp         |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/arrayops_meat.hpp          |  143 -
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/atlas_bones.hpp            |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/auxlib_bones.hpp           |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/auxlib_meat.hpp            |  772 ++++-
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/blas_bones.hpp             |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/compiler_setup.hpp         |   17 
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/debug.hpp                  |   24 
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/diagmat_proxy.hpp          |   93 
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/diagview_bones.hpp         |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/diagview_meat.hpp          |  128 
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/diskio_bones.hpp           |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/diskio_meat.hpp            |  104 
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/eGlueCube_bones.hpp        |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/eGlueCube_meat.hpp         |   14 
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/eGlue_bones.hpp            |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/eGlue_meat.hpp             |   14 
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/eOpCube_bones.hpp          |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/eOp_bones.hpp              |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/eglue_core_bones.hpp       |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/eglue_core_meat.hpp        |  519 ++-
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/eop_core_bones.hpp         |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/eop_core_meat.hpp          |  327 +-
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/field_bones.hpp            |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/fn_accu.hpp                |   40 
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/fn_det.hpp                 |    7 
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/fn_diagmat.hpp             |    7 
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/fn_elem.hpp                |   62 
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/fn_eye.hpp                 |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/fn_inv.hpp                 |   18 
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/fn_log_det.hpp             |    8 
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/fn_max.hpp                 |   38 
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/fn_mean.hpp                |   42 
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/fn_median.hpp              |   53 
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/fn_min.hpp                 |   38 
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/fn_ones.hpp                |   45 
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/fn_prod.hpp                |   20 
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/fn_randn.hpp               |   10 
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/fn_randu.hpp               |   12 
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/fn_stddev.hpp              |   20 
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/fn_strans.hpp              |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/fn_syl_lyap.hpp            |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/fn_symmat.hpp              |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/fn_trans.hpp               |   35 
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/fn_var.hpp                 |   20 
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/fn_zeros.hpp               |   12 
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/forward_bones.hpp          |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/gemm.hpp                   |  337 --
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/gemm_mixed.hpp             |   59 
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/gemv.hpp                   |  208 +
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/glue_conv_bones.hpp        |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/glue_conv_meat.hpp         |   16 
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/glue_cor_bones.hpp         |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/glue_cor_meat.hpp          |   12 
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/glue_cov_bones.hpp         |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/glue_cross_bones.hpp       |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/glue_cross_meat.hpp        |   47 
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/glue_join_bones.hpp        |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/glue_join_meat.hpp         |   46 
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/glue_kron_bones.hpp        |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/glue_mixed_bones.hpp       |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/glue_relational_bones.hpp  |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/glue_solve_bones.hpp       |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/glue_times_bones.hpp       |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/glue_times_meat.hpp        |  493 +--
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/glue_toeplitz_bones.hpp    |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/glue_toeplitz_meat.hpp     |    5 
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/injector_bones.hpp         |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/lapack_bones.hpp           |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/mtGlueCube_bones.hpp       |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/mtGlue_bones.hpp           |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/mtOpCube_bones.hpp         |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/mtOp_bones.hpp             |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/op_chol_bones.hpp          |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/op_cor_bones.hpp           |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/op_cor_meat.hpp            |   14 
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/op_cov_bones.hpp           |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/op_cumsum_bones.hpp        |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/op_cumsum_meat.hpp         |    9 
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/op_cx_scalar_bones.hpp     |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/op_diagmat_bones.hpp       |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/op_diagmat_meat.hpp        |   10 
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/op_diagvec_bones.hpp       |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/op_dot_bones.hpp           |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/op_dotext_bones.hpp        |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/op_find_bones.hpp          |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/op_flip_bones.hpp          |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/op_htrans_bones.hpp        |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/op_htrans_meat.hpp         |   98 
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/op_inv_bones.hpp           |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/op_inv_meat.hpp            |   13 
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/op_max_bones.hpp           |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/op_max_meat.hpp            |   57 
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/op_mean_bones.hpp          |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/op_mean_meat.hpp           |   34 
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/op_median_bones.hpp        |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/op_median_meat.hpp         |  214 -
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/op_min_bones.hpp           |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/op_min_meat.hpp            |   33 
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/op_misc_bones.hpp          |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/op_pinv_bones.hpp          |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/op_pinv_meat.hpp           |   10 
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/op_princomp_bones.hpp      |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/op_princomp_cov_bones.hpp  |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/op_prod_bones.hpp          |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/op_prod_meat.hpp           |   34 
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/op_relational_bones.hpp    |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/op_repmat_bones.hpp        |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/op_repmat_meat.hpp         |   29 
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/op_reshape_bones.hpp       |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/op_reshape_meat.hpp        |   32 
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/op_shuffle_bones.hpp       |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/op_shuffle_meat.hpp        |   10 
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/op_sort_bones.hpp          |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/op_stddev_bones.hpp        |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/op_stddev_meat.hpp         |   34 
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/op_strans_bones.hpp        |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/op_strans_meat.hpp         |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/op_sum_bones.hpp           |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/op_sum_meat.hpp            |   38 
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/op_symmat_bones.hpp        |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/op_symmat_meat.hpp         |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/op_trimat_bones.hpp        |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/op_trimat_meat.hpp         |  190 +
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/op_var_bones.hpp           |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/op_var_meat.hpp            |   37 
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/operator_times.hpp         |   12 
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/podarray_bones.hpp         |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/podarray_meat.hpp          |   57 
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/promote_type.hpp           |   18 
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/running_stat_bones.hpp     |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/running_stat_meat.hpp      |    2 
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/running_stat_vec_bones.hpp |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/subview_bones.hpp          |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/subview_cube_bones.hpp     |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/subview_cube_meat.hpp      |   50 
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/subview_elem1_bones.hpp    |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/subview_elem1_meat.hpp     |   24 
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/subview_field_bones.hpp    |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/subview_field_meat.hpp     |   37 
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/subview_meat.hpp           | 1423 +++++++++-
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/traits.hpp                 |   69 
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/typedef_u64.hpp            |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/undefine_conflicts.hpp     |only
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/unwrap.hpp                 |   64 
 RcppArmadillo-0.2.20/RcppArmadillo/inst/include/armadillo_bits/wall_clock_bones.hpp       |only
 RcppArmadillo-0.2.20/RcppArmadillo/src/RcppArmadillo.cpp                                  |   27 
 253 files changed, 6400 insertions(+), 2358 deletions(-)

More information about RcppArmadillo at CRAN
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New package DART with initial version 1.0
Package: DART
Type: Package
Title: Denoising Algorithm based on Relevance network Topology
Version: 1.0
Date: 2011-05-09
Author: Yan Jiao, Andrew E Teschendorff
Depends: igraph,DARTData
Maintainer:
Description: Denoising Algorithm based on Relevance network Topology is an algorithm evaluating the consistency of perturbation gene signature in molecular tumour profiles, which may improve the subsequent inference of pathway activity in clinical tumour specimens.
License: GPL-2
LazyLoad: yes
Packaged: 2011-05-25 21:32:11 UTC; rmhkyji
Repository: CRAN
Date/Publication: 2011-05-26 05:31:54

More information about DART at CRAN
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