Title: Selecting variable subsets
Description: A collection of functions which (i) assess the quality of
variable subsets as surrogates for a full data set, in either
an exploratory data analysis or in the context of a
multivariate linear model, and (ii) search for subsets which
are optimal under various criteria.
Author: Jorge Orestes Cerdeira
Maintainer: Jorge Cadima
Diff between subselect versions 0.10-1 dated 2009-12-13 and 0.11-1 dated 2011-07-27
subselect-0.10-1/subselect/man/leaps.Rd |only subselect-0.11-1/subselect/DESCRIPTION | 9 subselect-0.11-1/subselect/NAMESPACE | 4 subselect-0.11-1/subselect/R/anneal.R | 13 subselect-0.11-1/subselect/R/createHmat.R | 162 ++++++---- subselect-0.11-1/subselect/R/eleaps.R |only subselect-0.11-1/subselect/R/genetic.R | 13 subselect-0.11-1/subselect/R/improve.R | 13 subselect-0.11-1/subselect/R/initialization.R |only subselect-0.11-1/subselect/R/leaps.R | 184 ----------- subselect-0.11-1/subselect/R/validation.R | 29 + subselect-0.11-1/subselect/R/validmat.R | 25 + subselect-0.11-1/subselect/R/validnovcrit.R | 3 subselect-0.11-1/subselect/data |only subselect-0.11-1/subselect/inst/CHANGELOG | 29 + subselect-0.11-1/subselect/inst/doc |only subselect-0.11-1/subselect/man/anneal.Rd | 45 +- subselect-0.11-1/subselect/man/ccr12.Rd | 12 subselect-0.11-1/subselect/man/eleaps.Rd |only subselect-0.11-1/subselect/man/farm.Rd |only subselect-0.11-1/subselect/man/genetic.Rd | 28 + subselect-0.11-1/subselect/man/glhHmat.Rd | 179 ++--------- subselect-0.11-1/subselect/man/glmHmat.Rd | 32 + subselect-0.11-1/subselect/man/improve.Rd | 38 +- subselect-0.11-1/subselect/man/ldaHmat.Rd | 9 subselect-0.11-1/subselect/man/lmHmat.Rd | 16 subselect-0.11-1/subselect/man/rm.Rd | 2 subselect-0.11-1/subselect/man/rv.Rd | 2 subselect-0.11-1/subselect/man/subselect-internal.Rd | 13 subselect-0.11-1/subselect/man/tau2.Rd | 13 subselect-0.11-1/subselect/man/trimmatrix.Rd | 2 subselect-0.11-1/subselect/man/wald.Rd | 16 subselect-0.11-1/subselect/man/xi2.Rd | 12 subselect-0.11-1/subselect/man/zeta2.Rd | 13 subselect-0.11-1/subselect/src/CCRcrt.cpp | 59 ++- subselect-0.11-1/subselect/src/CCRcrt.h | 22 - subselect-0.11-1/subselect/src/ErrMReals.h |only subselect-0.11-1/subselect/src/GCDcrt.cpp | 24 - subselect-0.11-1/subselect/src/GCDcrt.h | 16 subselect-0.11-1/subselect/src/MStcrt.cpp | 68 +++- subselect-0.11-1/subselect/src/MStcrt.h | 35 +- subselect-0.11-1/subselect/src/Qforms.cpp | 86 +++-- subselect-0.11-1/subselect/src/Qforms.h | 30 + subselect-0.11-1/subselect/src/RMcrt.cpp | 107 ++++-- subselect-0.11-1/subselect/src/RMcrt.h | 26 + subselect-0.11-1/subselect/src/RVcrt.cpp | 226 ++++++++------ subselect-0.11-1/subselect/src/RVcrt.h | 30 + subselect-0.11-1/subselect/src/Rnk3CCRcrt.cpp | 69 ++-- subselect-0.11-1/subselect/src/Rnk3CCRcrt.h | 10 subselect-0.11-1/subselect/src/SRI_sscma.cpp | 80 +++- subselect-0.11-1/subselect/src/SRI_sscma.h | 22 - subselect-0.11-1/subselect/src/SR_datatrnsf.cpp | 182 ++++++----- subselect-0.11-1/subselect/src/SR_intf.cpp | 13 subselect-0.11-1/subselect/src/SpecialArrays.cpp | 4 subselect-0.11-1/subselect/src/SpecialArrays.h | 167 ++++++++-- subselect-0.11-1/subselect/src/Sscma.cpp | 125 +++++-- subselect-0.11-1/subselect/src/Sscma.h | 24 + subselect-0.11-1/subselect/src/Subsets.h | 6 subselect-0.11-1/subselect/src/VSQforms.cpp | 67 ++-- subselect-0.11-1/subselect/src/VSQforms.h | 14 subselect-0.11-1/subselect/src/Varsmbo.cpp | 306 +++++++++++-------- subselect-0.11-1/subselect/src/Vsmabo.h | 222 ++++++------- subselect-0.11-1/subselect/src/Wrkf1.cpp | 266 ++++++++++++---- 63 files changed, 1864 insertions(+), 1358 deletions(-)
Title: A Package for Running jags from R
Description: Using this package to call jags from R.
Author: Yu-Sung Su
Maintainer: Yu-Sung Su
Diff between R2jags versions 0.02-16 dated 2011-07-23 and 0.02-17 dated 2011-07-27
CHANGELOG | 4 ++++ DESCRIPTION | 12 ++++++------ R/jags.R | 27 +++++++++------------------ R/recompile.R | 2 +- 4 files changed, 20 insertions(+), 25 deletions(-)
Title: Ornstein-Uhlenbeck models for phylogenetic comparative
hypotheses
Description: Fit and compare Ornstein-Uhlenbeck models for evolution
along a phylogenetic tree.
Author: Aaron A. King
Maintainer: Aaron A. King
Diff between ouch versions 2.7-1 dated 2010-07-26 and 2.7-2 dated 2011-07-27
ouch-2.7-1/ouch/data/anolis.ssd.csv |only ouch-2.7-1/ouch/data/bimac.csv |only ouch-2.7-2/ouch/DESCRIPTION | 10 ++--- ouch-2.7-2/ouch/data/anolis.ssd.csv.gz |only ouch-2.7-2/ouch/data/bimac.csv.gz |only ouch-2.7-2/ouch/inst/ChangeLog | 18 ++++++++++ ouch-2.7-2/ouch/inst/NEWS | 56 ++++++++++++++++----------------- ouch-2.7-2/ouch/man/hansen.Rd | 6 +-- 8 files changed, 54 insertions(+), 36 deletions(-)
Title: Time Series Database Interface extension to connect to zip files
Description: Provides TSdbi package methods to retrieve time series
data from zipped, as if the files form a database.
Author: Paul Gilbert
Maintainer: Paul Gilbert
Diff between TSzip versions 2011.3-1 dated 2011-03-23 and 2011.6-1 dated 2011-07-27
DESCRIPTION | 12 ++++++------ LICENSE | 1 + inst/doc/Guide.pdf |binary 3 files changed, 7 insertions(+), 6 deletions(-)
Title: Time Series Database Interface extension to connect to
spreadsheets
Description: Provides TSdbi package methods to retrieve time series
data from spreadsheets, pretending the spreadsheet is a
database.
Author: Paul Gilbert
Maintainer: Paul Gilbert
Diff between TSxls versions 2011.3-1 dated 2011-03-23 and 2011.6-1 dated 2011-07-27
DESCRIPTION | 12 ++++++------ LICENSE | 1 + inst/doc/Guide.pdf |binary 3 files changed, 7 insertions(+), 6 deletions(-)
Title: Time Series Database Interface extensions for PADI Time Series
Server
Description: Provides methods for generics in the TSdbi package to
connect through a protocol for application database interface
(PADI) to a time series database (e.g. Fame).
Author: Paul Gilbert
Maintainer: Paul Gilbert
Diff between TSpadi versions 2011.3-1 dated 2011-03-23 and 2011.6-1 dated 2011-07-27
DESCRIPTION | 14 +++++++------- LICENSE | 1 + inst/doc/Guide.pdf |binary 3 files changed, 8 insertions(+), 7 deletions(-)
Title: Time Series Database Interface extensions for get.hist.quote
Description: Provides methods for generics in the TSdbi package to
retrieve data from historical quote URLs.
Author: Paul Gilbert
Maintainer: Paul Gilbert
Diff between TShistQuote versions 2011.3-1 dated 2011-03-23 and 2011.6-1 dated 2011-07-27
DESCRIPTION | 14 +++++++------- LICENSE | 1 + inst/doc/Guide.pdf |binary 3 files changed, 8 insertions(+), 7 deletions(-)
Title: Time Series Database Interface extension to connect with
getSymbols
Description: Provides methods for generics in the TSdbi package to
retrieve data with getSymbols, in particular from the Federal
Reserve FRED database.
Author: Paul Gilbert
Maintainer: Paul Gilbert
Diff between TSgetSymbol versions 2011.3-1 dated 2011-03-23 and 2011.6-1 dated 2011-07-27
DESCRIPTION | 14 +++++++------- LICENSE | 1 + inst/doc/Guide.pdf |binary 3 files changed, 8 insertions(+), 7 deletions(-)
Title: Seamless R and C++ Integration
Description: The Rcpp package provides a C++ library which facilitates
the integration of R and C++.
R data types (SEXP) are matched to C++ objects in a class hierarchy.
All R types are supported (vectors, functions, environment, etc
...) and each type is mapped to a dedicated class. For
example, numeric vectors are represented as instances of the
Rcpp::NumericVector class, environments are represented as
instances of Rcpp::Environment, functions are represented as
Rcpp::Function, etc ... The "Rcpp-introduction" vignette
provides a good entry point to Rcpp.
Conversion from C++ to R and back is driven by the templates Rcpp::wrap
and Rcpp::as which are highly flexible and extensible, as
documented in the "Rcpp-extending" vignette.
Rcpp also provides Rcpp modules, a framework that allows exposing C++
functions and classes to the R level. The "Rcpp-modules"
vignette details the current set of features of Rcpp-modules.
Rcpp includes a concept called Rcpp sugar that brings many R functions
into C++. Sugar takes advantage of lazy evaluation and
expression templates to achieve great performance while
exposing a syntax that is much nicer to use than the equivalent
low-level loop code. The "Rcpp-sugar" vignette gives an
overview of the feature.
Several examples are included, and 753 unit tests in 338 unit test
functions provide additional usage examples.
An earlier version of Rcpp, containing what we now call the 'classic
Rcpp API' was written during 2005 and 2006 by Dominick Samperi.
This code has been factored out of Rcpp into the package
RcppClassic and it is still available for code relying on this
interface. New development should use this package instead.
Author: Dirk Eddelbuettel and Romain Francois, with contributions by
Douglas Bates and John Chambers
Maintainer: Dirk Eddelbuettel and Romain Francois
Diff between Rcpp versions 0.9.5 dated 2011-07-06 and 0.9.6 dated 2011-07-27
Rcpp-0.9.5/Rcpp/COPYING |only Rcpp-0.9.6/Rcpp/ChangeLog | 42 ++++++- Rcpp-0.9.6/Rcpp/DESCRIPTION | 8 - Rcpp-0.9.6/Rcpp/inst/NEWS | 21 +++ Rcpp-0.9.6/Rcpp/inst/doc/Rcpp-FAQ.pdf |binary Rcpp-0.9.6/Rcpp/inst/doc/Rcpp-extending.pdf |binary Rcpp-0.9.6/Rcpp/inst/doc/Rcpp-introduction.pdf |binary Rcpp-0.9.6/Rcpp/inst/doc/Rcpp-modules.pdf |binary Rcpp-0.9.6/Rcpp/inst/doc/Rcpp-package.pdf |binary Rcpp-0.9.6/Rcpp/inst/doc/Rcpp-quickref.pdf |binary Rcpp-0.9.6/Rcpp/inst/doc/Rcpp-sugar.pdf |binary Rcpp-0.9.6/Rcpp/inst/doc/Rcpp-unitTests.pdf |binary Rcpp-0.9.6/Rcpp/inst/doc/unitTests-results/Rcpp-unitTests.html | 16 +- Rcpp-0.9.6/Rcpp/inst/doc/unitTests-results/Rcpp-unitTests.txt | 44 +++---- Rcpp-0.9.6/Rcpp/inst/examples/Fibonacci |only Rcpp-0.9.6/Rcpp/inst/examples/RcppGibbs |only Rcpp-0.9.6/Rcpp/inst/include/Rcpp/XPtr.h | 58 +++++----- Rcpp-0.9.6/Rcpp/inst/include/Rcpp/config.h | 2 Rcpp-0.9.6/Rcpp/inst/include/Rcpp/internal/wrap.h | 23 +++ Rcpp-0.9.6/Rcpp/inst/include/Rcpp/traits/is_eigen_base.h |only Rcpp-0.9.6/Rcpp/inst/include/RcppCommon.h | 1 21 files changed, 145 insertions(+), 70 deletions(-)
Title: Package for analysis and visualization of metagenes
Description: This package translates microarray expression data into
metagenes and provides various visualizations and second level
analyses.
Author: Henry Wirth
Maintainer: Henry Wirth
Diff between oposSOM versions 0.1-1 dated 2011-06-17 and 0.1-3 dated 2011-07-27
DESCRIPTION | 8 ++++---- R/pipeline.r | 2 +- data |only man/oposSOM-package.Rd | 26 ++++++++++++++++++++++---- man/run.pipeline.Rd | 38 +++++++++++++++++++++++++++++++------- man/tissues.Rd |only 6 files changed, 58 insertions(+), 16 deletions(-)
Title: opencpu object encoder/decoder
Description: Encodes R objects to a standardized JSON format
Author: Jeroen Ooms
Maintainer: Jeroen Ooms
Diff between opencpu.encode versions 0.1 dated 2011-07-24 and 0.11 dated 2011-07-27
DESCRIPTION | 8 ++++---- R/depackageObject.R | 2 +- R/packageObject.R | 2 +- R/toJSON.integer.R | 8 ++------ R/toJSON.logical.R | 8 ++------ README.md |only 6 files changed, 10 insertions(+), 18 deletions(-)
More information about opencpu.encode at CRAN
Permanent link
Title: Server Side Scripting with R
Description: A package for writing server side R scripts with session,
application and cookie support
Author: Mehmet Hakan Satman
Maintainer: Mehmet Hakan Satman
Diff between SSSR versions 1.0.3 dated 2010-11-26 and 1.0.5 dated 2011-07-27
DESCRIPTION | 17 +++++------ NAMESPACE |only R/SSSR.r | 78 +++++++++++++++++++++++++++++----------------------- man/SSSR-package.Rd | 9 ++---- 4 files changed, 56 insertions(+), 48 deletions(-)
More information about RcmdrPlugin.KMggplot2 at CRAN
Permanent link
Title: Practical Numerical Math Functions
Description: This package provides R implementations of functions in
numerical analysis, with a special view on on optimization and
time series routines. Uses Matlab/Octave function names where
appropriate to simplify porting.
Author: Hans W Borchers
Maintainer: HwB
Diff between pracma versions 0.7-3 dated 2011-07-23 and 0.7.5 dated 2011-07-27
pracma-0.7-3/pracma/doc/NEWS.Rd |only pracma-0.7-3/pracma/inst/NEWS.pdf |only pracma-0.7.5/pracma/DESCRIPTION | 10 +++++----- pracma-0.7.5/pracma/NEWS | 15 ++++++++++++++- pracma-0.7.5/pracma/R/rortho.R |only pracma-0.7.5/pracma/data |only pracma-0.7.5/pracma/doc/NEWS.pdf |only pracma-0.7.5/pracma/inst/NEWS.Rd |only pracma-0.7.5/pracma/man/rortho.Rd |only pracma-0.7.5/pracma/man/titanium.Rd |only 10 files changed, 19 insertions(+), 6 deletions(-)
Title: Forward search for Mokken scale analysis
Description: fwdmsa performs the Forward Search for Mokken scale
analysis. It detects outliers, it produces several types of
diagnostic plots.
Author: Wobbe P. Zijlstra
Maintainer: Wobbe P. Zijlstra
Diff between fwdmsa versions 0.1 dated 2010-07-08 and 0.2 dated 2011-07-27
fwdmsa-0.1/fwdmsa/R/X.residual.R |only fwdmsa-0.1/fwdmsa/R/coefH.R |only fwdmsa-0.1/fwdmsa/R/coefZ.R |only fwdmsa-0.1/fwdmsa/R/fs.MSA.R |only fwdmsa-0.1/fwdmsa/R/fs.MSA.n1.R |only fwdmsa-0.1/fwdmsa/R/memberR.R |only fwdmsa-0.1/fwdmsa/R/memberX.R |only fwdmsa-0.1/fwdmsa/R/plot.fs.class.n1.R |only fwdmsa-0.1/fwdmsa/R/zzz.r |only fwdmsa-0.1/fwdmsa/man/fs.MSA.Rd |only fwdmsa-0.1/fwdmsa/man/fs.MSA.n1.Rd |only fwdmsa-0.2/fwdmsa/DESCRIPTION | 10 +++++----- fwdmsa-0.2/fwdmsa/R/coefh.R |only fwdmsa-0.2/fwdmsa/R/coefz.R |only fwdmsa-0.2/fwdmsa/R/count.R | 4 ++-- fwdmsa-0.2/fwdmsa/R/fs.msa.R |only fwdmsa-0.2/fwdmsa/R/fs.msa.n1.R |only fwdmsa-0.2/fwdmsa/R/memberr.R |only fwdmsa-0.2/fwdmsa/R/memberx.R |only fwdmsa-0.2/fwdmsa/R/observation.obj.func.R | 4 ++-- fwdmsa-0.2/fwdmsa/R/plot.fs.class.R | 4 ++-- fwdmsa-0.2/fwdmsa/R/plot.fs.n1.class.R |only fwdmsa-0.2/fwdmsa/R/x.residual.R |only fwdmsa-0.2/fwdmsa/man/fs.msa.Rd |only fwdmsa-0.2/fwdmsa/man/fs.msa.n1.Rd |only fwdmsa-0.2/fwdmsa/man/fwdmsa-package.Rd | 14 +++++++------- fwdmsa-0.2/fwdmsa/man/plot.fs.class.Rd | 6 +++--- fwdmsa-0.2/fwdmsa/man/plot.fs.n1.class.Rd | 15 +++++++++------ 28 files changed, 30 insertions(+), 27 deletions(-)
Title: CRAN Task Views
Description: Server-side and client-side tools for task views to
CRAN-style repositories
Author: Achim Zeileis, Kurt Hornik
Maintainer: Achim Zeileis
Diff between ctv versions 0.7-2 dated 2011-04-17 and 0.7-3 dated 2011-07-27
ctv-0.7-2/ctv/COPYING |only ctv-0.7-2/ctv/COPYRIGHTS |only ctv-0.7-3/ctv/DESCRIPTION | 8 ctv-0.7-3/ctv/NEWS | 6 ctv-0.7-3/ctv/R/ctv-server.R | 3 ctv-0.7-3/ctv/inst/ctv/Bayesian.ctv | 314 +++++++++++++------- ctv-0.7-3/ctv/inst/ctv/ChemPhys.ctv | 12 ctv-0.7-3/ctv/inst/ctv/Cluster.ctv | 26 - ctv-0.7-3/ctv/inst/ctv/Distributions.ctv | 203 ++++++++++-- ctv-0.7-3/ctv/inst/ctv/Econometrics.ctv | 24 + ctv-0.7-3/ctv/inst/ctv/ExperimentalDesign.ctv | 23 + ctv-0.7-3/ctv/inst/ctv/Finance.ctv | 21 - ctv-0.7-3/ctv/inst/ctv/Genetics.ctv | 9 ctv-0.7-3/ctv/inst/ctv/HighPerformanceComputing.ctv | 14 ctv-0.7-3/ctv/inst/ctv/MachineLearning.ctv | 22 + ctv-0.7-3/ctv/inst/ctv/Phylogenetics.ctv | 5 ctv-0.7-3/ctv/inst/ctv/Psychometrics.ctv | 6 ctv-0.7-3/ctv/inst/ctv/Spatial.ctv | 9 ctv-0.7-3/ctv/inst/ctv/Survival.ctv | 182 +++++++---- ctv-0.7-3/ctv/inst/ctv/TimeSeries.ctv | 23 + ctv-0.7-3/ctv/inst/ctv/gR.ctv | 21 - ctv-0.7-3/ctv/inst/doc/ctv-howto.pdf |binary 22 files changed, 661 insertions(+), 270 deletions(-)