Title: Spike Train Analysis with R
Diff between STAR versions 0.3-4 dated 2009-09-29 and 0.3-5 dated 2012-04-11
Description: Functions to analyze neuronal spike trains from a single
neuron or from several neurons recorded simultaneously.
Author: Christophe Pouzat
Maintainer: Christophe Pouzat
STAR-0.3-4/STAR/++svn-log++ |only
STAR-0.3-4/STAR/inst/doc/auto |only
STAR-0.3-5/STAR/ChangeLog | 9 +++++++++
STAR-0.3-5/STAR/DESCRIPTION | 10 +++++-----
STAR-0.3-5/STAR/MD5 |only
STAR-0.3-5/STAR/R/CPSP.R | 2 +-
STAR-0.3-5/STAR/R/gamObj.R | 2 +-
STAR-0.3-5/STAR/R/gsspsth.R | 2 +-
STAR-0.3-5/STAR/R/sim.R | 10 +++++-----
STAR-0.3-5/STAR/data/CAL1S.rda |binary
STAR-0.3-5/STAR/data/CAL1V.rda |binary
STAR-0.3-5/STAR/data/CAL2C.rda |binary
STAR-0.3-5/STAR/data/CAL2S.rda |binary
STAR-0.3-5/STAR/data/ShallowShocks.rda |binary
STAR-0.3-5/STAR/data/e060517ionon.rda |binary
STAR-0.3-5/STAR/data/e060517spont.rda |binary
STAR-0.3-5/STAR/data/e060817citron.rda |binary
STAR-0.3-5/STAR/data/e060817mix.rda |binary
STAR-0.3-5/STAR/data/e060817spont.rda |binary
STAR-0.3-5/STAR/data/e060817terpi.rda |binary
STAR-0.3-5/STAR/data/e060824citral.rda |binary
STAR-0.3-5/STAR/data/e060824spont.rda |binary
STAR-0.3-5/STAR/data/e070528citronellal.rda |binary
STAR-0.3-5/STAR/data/e070528spont.rda |binary
STAR-0.3-5/STAR/data/mPK.rda |binary
STAR-0.3-5/STAR/data/sPK.rda |binary
STAR-0.3-5/STAR/inst/doc/IEwSTARshort.pdf |binary
STAR-0.3-5/STAR/vignettes |only
28 files changed, 22 insertions(+), 13 deletions(-)
Title: Structural Equation Models
Diff between sem versions 2.1-1 dated 2011-11-23 and 3.0-0 dated 2012-04-11
Description: This package contains functions for fitting general linear
structural equation models (with observed and unobserved
variables) using the RAM approach, and for fitting structural
equations in observed-variable models by two-stage least
squares.
Author: John Fox [aut, cre], Zhenghua Nie [aut], Jarrett Byrnes [aut],
Michael Culbertson [ctb], Michael Friendly [ctb], Adam Kramer
[ctb], Georges Monette [ctb]
Maintainer: John Fox
sem-2.1-1/sem/data/Klein.txt.bz2 |only
sem-3.0-0/sem/.project |only
sem-3.0-0/sem/DESCRIPTION | 33 ++--
sem-3.0-0/sem/MD5 | 71 +++++----
sem-3.0-0/sem/NAMESPACE | 44 +++++
sem-3.0-0/sem/NEWS | 29 +++
sem-3.0-0/sem/R/csem.R |only
sem-3.0-0/sem/R/modIndices.R | 189 ++++++++++++++++++++----
sem-3.0-0/sem/R/multigroup.R |only
sem-3.0-0/sem/R/objectiveGLS.R | 28 +--
sem-3.0-0/sem/R/objectiveGLS2.R |only
sem-3.0-0/sem/R/objectiveML.R | 83 ++++++----
sem-3.0-0/sem/R/objectiveML2.R |only
sem-3.0-0/sem/R/optimizerSem.R |only
sem-3.0-0/sem/R/print.methods.R | 3
sem-3.0-0/sem/R/sem.R | 40 ++---
sem-3.0-0/sem/R/specifyModel.R | 36 ++--
sem-3.0-0/sem/R/standardizedCoefficients.R | 25 +--
sem-3.0-0/sem/R/summary.methods.R | 99 +++++++-----
sem-3.0-0/sem/R/tsls.R | 200 +++++++++++++-------------
sem-3.0-0/sem/R/update.R | 29 +++
sem-3.0-0/sem/cleanup |only
sem-3.0-0/sem/data/Bollen.rda |binary
sem-3.0-0/sem/data/CNES.rda |binary
sem-3.0-0/sem/data/Klein.txt.gz |only
sem-3.0-0/sem/data/Kmenta.txt.gz |binary
sem-3.0-0/sem/inst/etc/model-HS.txt |only
sem-3.0-0/sem/inst/etc/model-Thurstone.txt | 2
sem-3.0-0/sem/man/ML.methods.Rd | 31 +++-
sem-3.0-0/sem/man/effects.Rd | 6
sem-3.0-0/sem/man/fscores.Rd | 7
sem-3.0-0/sem/man/modIndices.Rd | 14 +
sem-3.0-0/sem/man/objective.functions.Rd | 28 +++
sem-3.0-0/sem/man/optimizers.Rd | 21 ++
sem-3.0-0/sem/man/residuals.Rd | 9 -
sem-3.0-0/sem/man/sem.Rd | 148 +++++++++++++++++--
sem-3.0-0/sem/man/specifyModel.Rd | 84 +++++++++-
sem-3.0-0/sem/man/standardizedCoefficients.Rd | 13 +
sem-3.0-0/sem/man/tsls.Rd | 8 -
sem-3.0-0/sem/src |only
40 files changed, 916 insertions(+), 364 deletions(-)
Title: R Commander
Diff between Rcmdr versions 1.8-3 dated 2012-02-17 and 1.8-4 dated 2012-04-11
Description: A platform-independent basic-statistics GUI (graphical
user interface) for R, based on the tcltk package.
Author: John Fox [aut, cre], Liviu Andronic [ctb], Michael Ash [ctb],
Milan Bouchet-Valat [ctb], Theophilius Boye [ctb], Stefano
Calza [ctb], Andy Chang [ctb], Philippe Grosjean [ctb], Richard
Heiberger [ctb], Kosar Karimi Pour [ctb], G. Jay Kerns [ctb],
Renaud Lancelot [ctb], Matthieu Lesnoff [ctb], Uwe Ligges
[ctb], Samir Messad [ctb], Martin Maechler [ctb], Robert
Muenchen [ctb], Duncan Murdoch [ctb], Erich Neuwirth [ctb], Dan
Putler [ctb], Brian Ripley [ctb], Miroslav Ristic [ctb], Peter
Wolf [ctb]
Maintainer: John Fox
Rcmdr-1.8-3/Rcmdr/po/R-sl.po |only
Rcmdr-1.8-4/Rcmdr/.project |only
Rcmdr-1.8-4/Rcmdr/DESCRIPTION | 10
Rcmdr-1.8-4/Rcmdr/MD5 | 37
Rcmdr-1.8-4/Rcmdr/NEWS | 20
Rcmdr-1.8-4/Rcmdr/R/commander.R | 50
Rcmdr-1.8-4/Rcmdr/R/utilities.R | 15
Rcmdr-1.8-4/Rcmdr/inst/po/es/LC_MESSAGES/R-Rcmdr.mo |binary
Rcmdr-1.8-4/Rcmdr/inst/po/it/LC_MESSAGES/R-Rcmdr.mo |binary
Rcmdr-1.8-4/Rcmdr/inst/po/ko/LC_MESSAGES/R-Rcmdr.mo |binary
Rcmdr-1.8-4/Rcmdr/inst/po/sl/LC_MESSAGES/R-Rcmdr.mo |binary
Rcmdr-1.8-4/Rcmdr/man/Commander.Rd | 3
Rcmdr-1.8-4/Rcmdr/man/Rcmdr-package.Rd | 4
Rcmdr-1.8-4/Rcmdr/man/numSummary.Rd | 2
Rcmdr-1.8-4/Rcmdr/man/rcorr.adjust.Rd | 2
Rcmdr-1.8-4/Rcmdr/po/R-Rcmdr.pot | 16
Rcmdr-1.8-4/Rcmdr/po/R-es.po | 7935 ++++++++++----------
Rcmdr-1.8-4/Rcmdr/po/R-it.po | 7810 +++++++++----------
Rcmdr-1.8-4/Rcmdr/po/R-ko.po | 954 +-
Rcmdr-1.8-4/Rcmdr/po/R-sl_utf-8.po | 830 +-
Rcmdr-1.8-4/Rcmdr/src/Makevars.win | 2
21 files changed, 8974 insertions(+), 8716 deletions(-)
Title: Robust PCA by Projection Pursuit
Diff between pcaPP versions 1.9-45 dated 2011-12-27 and 1.9-46 dated 2012-04-11
Description: Robust PCA by Projection Pursuit
Author: Peter Filzmoser, Heinrich Fritz, Klaudius Kalcher
Maintainer: Heinrich Fritz
DESCRIPTION | 6 +++---
MD5 | 8 ++++----
R/opt.TPO.R | 10 ++++++----
inst/doc/matlab.pdf |binary
src/smat.base.h | 8 ++++----
5 files changed, 17 insertions(+), 15 deletions(-)
Title: Interface to Unidata netCDF (version 4 or earlier) format data
files
Diff between ncdf4 versions 1.6 dated 2012-04-10 and 1.6.1 dated 2012-04-11
Description: This package provides a high-level R interface to data
files written using Unidata's netCDF library (version 4 or
earlier), which are binary data files that are portable across
platforms and include metadata information in addition to the
data sets. Using this package, netCDF files (either version 4
or "classic" version 3) can be opened and data sets read in
easily. It is also easy to create new netCDF dimensions,
variables, and files, in either version 3 or 4 format, and
manipulate existing netCDF files. This package replaces the
former ncdf package, which only worked with netcdf version 3
files. For various reasons the names of the functions have had
to be changed from the names in the ncdf package. The old ncdf
package is still available at the URL given below, if you need
to have backward compatibility. It should be possible to have
both the ncdf and ncdf4 packages installed simultaneously
without a problem. However, the ncdf package does not provide
an interface for netcdf version 4 files.
Author: David Pierce
Maintainer: David Pierce
DESCRIPTION | 8 ++++----
MD5 | 4 ++--
R/ncdf4.R | 4 ++--
3 files changed, 8 insertions(+), 8 deletions(-)
Title: Effect Displays for Linear, Generalized Linear,
Multinomial-Logit, Proportional-Odds Logit Models and
Mixed-Effects Models
Diff between effects versions 2.1-0 dated 2011-08-04 and 2.1-1 dated 2012-04-11
Description: Graphical and tabular effect displays, e.g., of
interactions, for linear generalized linear, multinomial-logit,
and proportional-odds logit models.
Author: John Fox [aut, cre], Sanford Weisberg [aut], Jangman Hong
[aut], Robert Andersen [ctb], David Firth [ctb], Michael
Friendly [ctb]
Maintainer: John Fox
DESCRIPTION | 29 +++--
MD5 |only
NAMESPACE | 2
NEWS |only
R/effects.R | 226 ++++++++++++++++++++++++++++++++---------
R/effectsmer.R | 11 +
R/plot-summary-print-methods.R | 19 ++-
R/utilities.R | 39 +++++--
data/Arrests.rda |binary
data/BEPS.rda |binary
data/Cowles.rda |binary
data/Hartnagel.rda |binary
data/Prestige.rda |binary
data/Titanic.rda |binary
data/WVS.rda |binary
data/Wells.rda |binary
inst/CHANGES | 3
man/effect.Rd | 35 +++---
man/effects-package.Rd | 24 +---
19 files changed, 277 insertions(+), 111 deletions(-)
Title: Time wave analysis and graphical representation
Diff between seewave versions 1.6.2 dated 2012-04-03 and 1.6.3 dated 2012-04-11
Description: seewave provides functions for analysing, manipulating,
displaying, editing and synthesizing time waves (particularly
sound). This package processes time analysis (oscillograms and
envelopes), spectral content, resonance quality factor,
entropy, cross correlation and autocorrelation, zero-crossing,
dominant frequency, analytic signal, frequency coherence, 2D
and 3D spectrograms and many other analyses.
Author: Jerome Sueur
Maintainer: Jerome Sueur
DESCRIPTION | 10 +++++-----
MD5 | 18 +++++++++---------
NEWS | 5 +++++
inst/doc/seewave_IO.pdf |binary
man/dynoscillo.Rd | 2 +-
man/rmam.Rd | 2 +-
man/seewave.package.Rd | 4 ++--
man/sh.Rd | 4 ++--
man/specprop.Rd | 2 +-
man/wasp.Rd | 10 +++++-----
10 files changed, 31 insertions(+), 26 deletions(-)
Title: Building Kriging models from FANOVA graphs
Diff between fanovaGraph versions 1.0 dated 2011-12-12 and 1.1 dated 2012-04-11
Description: Estimation and plotting of a function's FANOVA graph to
identify the interaction structure and fitting, prediction and
simulation of a kriging model modified by the identified
structure.
Author: Jana Fruth, Thomas Muehlenstaedt, Olivier Roustant
Maintainer:
fanovaGraph-1.0/fanovaGraph/R/MLoptimContrained.R |only
fanovaGraph-1.0/fanovaGraph/R/estimateGraphFix.R |only
fanovaGraph-1.0/fanovaGraph/R/yhat.R |only
fanovaGraph-1.1/fanovaGraph/CHANGELOG |only
fanovaGraph-1.1/fanovaGraph/DESCRIPTION | 15 ++--
fanovaGraph-1.1/fanovaGraph/MD5 | 41 ++++++-----
fanovaGraph-1.1/fanovaGraph/NAMESPACE | 6 +
fanovaGraph-1.1/fanovaGraph/R/AdditiveKriging.R |only
fanovaGraph-1.1/fanovaGraph/R/estimateGraph.R | 24 +++++-
fanovaGraph-1.1/fanovaGraph/R/estimateGraphFixFast.R |only
fanovaGraph-1.1/fanovaGraph/R/estimateGraphFixLO.R |only
fanovaGraph-1.1/fanovaGraph/R/estimateGraphRBD.R | 2
fanovaGraph-1.1/fanovaGraph/R/estimateGraphSob.R | 27 +++----
fanovaGraph-1.1/fanovaGraph/R/modify.igraph.R | 12 +--
fanovaGraph-1.1/fanovaGraph/R/plotDeltaSteps.R | 2
fanovaGraph-1.1/fanovaGraph/R/simAdd.R |only
fanovaGraph-1.1/fanovaGraph/demo/Estimation.R | 35 +++++----
fanovaGraph-1.1/fanovaGraph/demo/Example6D.R | 14 +--
fanovaGraph-1.1/fanovaGraph/demo/ExampleIshigami.R | 14 +--
fanovaGraph-1.1/fanovaGraph/man/MLoptimConstrained.Rd | 55 +++++++++++----
fanovaGraph-1.1/fanovaGraph/man/estimateGraph.Rd | 28 +++++--
fanovaGraph-1.1/fanovaGraph/man/fanovaGraph-package.Rd | 17 +++-
fanovaGraph-1.1/fanovaGraph/man/plotGraphChange.Rd | 8 +-
fanovaGraph-1.1/fanovaGraph/man/simAdd.Rd |only
fanovaGraph-1.1/fanovaGraph/man/threshold.Rd | 2
fanovaGraph-1.1/fanovaGraph/man/yhat.Rd | 61 +++++++++++++----
26 files changed, 231 insertions(+), 132 deletions(-)
Title: Evolutionary Learning of Globally Optimal Trees
Diff between evtree versions 0.1-1 dated 2011-10-02 and 0.1-2 dated 2012-04-11
Description: Commonly used classification and regression tree methods
like the CART algorithm are recursive partitioning methods that
build the model in a forward stepwise search. Although this
approach is known to be an efficient heuristic, the results of
recursive tree methods are only locally optimal, as splits are
chosen to maximize homogeneity at the next step only. An
alternative way to search over the parameter space of trees is
to use global optimization methods like evolutionary
algorithms. The evtree package implements an evolutionary
algorithm for learning globally optimal classification and
regression trees in R. CPU and memory-intensive tasks are fully
computed in C++ while the partykit package is leveraged to
represent the resulting trees in R, providing unified
infrastructure for summaries, visualizations, and predictions.
Author: Thomas Grubinger [aut, cre], Achim Zeileis [aut], Karl-Peter
Pfeiffer [aut]
Maintainer: Thomas Grubinger
evtree-0.1-1/evtree/analysis |only
evtree-0.1-1/evtree/inst/doc/evtree.bib |only
evtree-0.1-1/evtree/inst/doc/results |only
evtree-0.1-2/evtree/DESCRIPTION | 8
evtree-0.1-2/evtree/MD5 | 67 +++---
evtree-0.1-2/evtree/NEWS | 9
evtree-0.1-2/evtree/data/BBBClub.rda |binary
evtree-0.1-2/evtree/data/ContraceptiveChoice.RData |binary
evtree-0.1-2/evtree/data/GermanCredit.RData |binary
evtree-0.1-2/evtree/data/MAGICGammaTelescope.RData |binary
evtree-0.1-2/evtree/data/StatlogHeart.RData |binary
evtree-0.1-2/evtree/inst/CITATION |only
evtree-0.1-2/evtree/inst/doc/evtree.Rnw | 219 ++++++++++++---------
evtree-0.1-2/evtree/inst/doc/evtree.pdf |binary
evtree-0.1-2/evtree/tests |only
evtree-0.1-2/evtree/vignettes |only
16 files changed, 173 insertions(+), 130 deletions(-)
Title: Bayesian analysis for exponential random graph models
Diff between Bergm versions 2.2 dated 2012-03-20 and 2.3 dated 2012-04-11
Description: Set of tools to analyse Bayesian exponential random graph
models
Author: Alberto Caimo and Nial Friel
Maintainer: Alberto Caimo
DESCRIPTION | 11 ++++----
MD5 | 10 +++----
R/bergm.R | 47 +++++++++++++----------------------
R/bergmS.R | 67 ++++++++++++++++++++++++---------------------------
R/bgof.R | 14 ----------
man/Bergm-package.Rd | 2 -
6 files changed, 62 insertions(+), 89 deletions(-)
Title: Multivariate Dependence with Copulas
Diff between copula versions 0.99-0 dated 2012-03-30 and 0.99-1 dated 2012-04-11
Description: Classes (S4) of commonly used copulas including elliptical
(normal and t), Archimedean (Clayton, Gumbel, Frank, and
Ali-Mikhail-Haq), extreme value (Gumbel, Husler-Reiss,
Galambos, Tawn, and t-EV), and other families (Plackett and
Farlie-Gumbel-Morgenstern). Methods for density, distribution,
random number generation, bivariate dependence measures,
perspective and contour plots. Functions for fitting copula
models with variance estimate. Independence tests among random
variables and random vectors. Serial independence tests for
univariate and multivariate continuous time series.
Goodness-of-fit tests for copulas based on multipliers and on
the parametric bootstrap. Bivariate and multivariate tests of
extreme-value dependence. Bivariate tests of exchangeability.
Now with former 'nacopula' for working with nested Archimedean
copulas. Specifically, providing procedures for computing
function values and cube volumes, characteristics such as
Kendall's tau and tail dependence coefficients, efficient
sampling algorithms, various estimators, and goodness-of-fit
tests. The package also contains related univariate
distributions and special functions such as the Sibuya
distribution, the polylogarithm, Stirling and Eulerian numbers.
Author: Jun Yan
Maintainer: Martin Maechler
copula-0.99-0/copula/tests/tail.R |only
copula-0.99-1/copula/DESCRIPTION | 12 +-
copula-0.99-1/copula/MD5 | 17 +--
copula-0.99-1/copula/R/derCdfPdf.R | 113 +++++++++++-----------
copula-0.99-1/copula/R/special-func.R | 2
copula-0.99-1/copula/R/tCopula.R | 10 +
copula-0.99-1/copula/inst/doc/Frank-Rmpfr.Rnw | 17 +--
copula-0.99-1/copula/inst/doc/Frank-Rmpfr.pdf |binary
copula-0.99-1/copula/inst/doc/nacopula-pkg.pdf |binary
copula-0.99-1/copula/tests/tail-pcopula.R |only
copula-0.99-1/copula/tests/tail-pcopula.Rout.save |only
11 files changed, 93 insertions(+), 78 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2009-03-10 0.3
2005-12-02 0.2
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2011-05-11 1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2010-01-07 1.2-0
2007-07-16 1.0-1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2010-01-08 2.0-1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2011-09-08 2.13.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2011-11-11 0.1-1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2011-05-03 1.24
2011-04-30 1.23
2011-04-27 1.22
2011-04-24 1.21
2011-04-23 1.20
2011-03-21 1.18.1
2010-09-29 1.18
2010-05-09 1.11
2010-04-25 1.10
2010-01-26 1.09
2010-01-18 1.08
2010-01-08 1.07
2009-10-30 1.05
2009-01-07 1.03
2007-09-14 0.83
Title: Scalable Robust Estimators with High Breakdown Point for
Incomplete Data
Diff between rrcovNA versions 0.4-02 dated 2011-05-08 and 0.4-03 dated 2012-04-11
Description: Robust Location and Scatter Estimation and Robust
Multivariate Analysis with High Breakdown Point for Incomplete
Data
Author: Valentin Todorov
Maintainer: Valentin Todorov
ChangeLog | 9 +++++++--
DESCRIPTION | 8 ++++----
MD5 |only
NAMESPACE |only
R/PcaNA.R | 5 ++++-
R/covNAMcd3.R | 6 +++---
R/zzz.R | 8 ++------
src/emncov.f | 5 +++--
tests/tseqimp.Rout.save | 15 +++++++++++----
9 files changed, 34 insertions(+), 22 deletions(-)
Title: Rcpp integration for Armadillo templated linear algebra library
Diff between RcppArmadillo versions 0.2.36 dated 2012-03-06 and 0.3.0 dated 2012-04-11
Description: R and Armadillo integration using Rcpp Armadillo is a
templated C++ linear algebra library (by Conrad Sanderson) that
aims towards a good balance between speed and ease of use.
Integer, floating point and complex numbers are supported, as
well as a subset of trigonometric and statistics functions.
Various matrix decompositions are provided through optional
integration with LAPACK and ATLAS libraries.
A delayed evaluation approach is employed (during compile time) to
combine several operations into one, and to reduce (or
eliminate) the need for temporaries. This is accomplished
through recursive templates and template meta-programming.
This library is useful if C++ has been decided as the language of
choice (due to speed and/or integration capabilities), rather
than another language.
The RcppArmadillo package includes the header files from the templated
Armadillo library (currently version 3.0.0). Thus users do not
need to install Armadillo itself in order to use RcppArmadillo.
This Armadillo integration provides a nice illustration of the
capabilities of the Rcpp package for seamless R and C++
integration.
Armadillo is licensed under the GNU LGPL version 3 or later, while
RcppArmadillo (the Rcpp bindings/bridge to Armadillo) is
licenses under the GNU GPL version 2 or later, as is the rest
of Rcpp.
Author: Romain Francois, Dirk Eddelbuettel and Doug Bates
Maintainer: Romain Francois, Dirk Eddelbuettel and Doug Bates
RcppArmadillo-0.2.36/RcppArmadillo/inst/include/armadillo_bits/itpp_wrap.hpp |only
RcppArmadillo-0.3.0/RcppArmadillo/ChangeLog | 40
RcppArmadillo-0.3.0/RcppArmadillo/DESCRIPTION | 10
RcppArmadillo-0.3.0/RcppArmadillo/MD5 | 247 ++--
RcppArmadillo-0.3.0/RcppArmadillo/inst/NEWS | 50
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/RcppArmadilloWrap.h | 4
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo | 21
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/Base_bones.hpp | 38
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/Base_meat.hpp | 50
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/Col_bones.hpp | 29
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/Col_meat.hpp | 193 ++-
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/Cube_meat.hpp | 26
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/Gen_bones.hpp | 14
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/Gen_meat.hpp | 93 -
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/Glue_bones.hpp | 7
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/Mat_bones.hpp | 78 -
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/Mat_meat.hpp | 608 +++++++---
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/Op_bones.hpp | 7
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/Proxy.hpp | 296 ++++
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/ProxyCube.hpp | 2
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/Row_bones.hpp | 30
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/Row_meat.hpp | 193 ++-
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/arma_ostream_meat.hpp | 31
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/arma_version.hpp | 12
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/arrayops_bones.hpp | 9
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/arrayops_meat.hpp | 69 -
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/auxlib_meat.hpp | 82 -
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/compiler_setup.hpp | 5
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/cond_rel_bones.hpp |only
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/cond_rel_meat.hpp |only
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/config.hpp | 3
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/constants.hpp | 235 +--
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/constants_compat.hpp |only
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/debug.hpp | 2
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/diagview_bones.hpp | 21
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/diagview_meat.hpp | 86 -
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/diskio_meat.hpp | 2
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/eGlue_bones.hpp | 11
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/eGlue_meat.hpp | 9
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/eOp_bones.hpp | 16
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/eOp_meat.hpp | 38
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/eglue_core_meat.hpp | 95 -
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/eop_aux.hpp | 15
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/eop_core_meat.hpp | 53
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/field_bones.hpp | 7
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/field_meat.hpp | 10
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/fn_accu.hpp | 312 ++---
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/fn_conv_to.hpp | 418 ------
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/fn_cumsum.hpp | 95 -
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/fn_det.hpp | 11
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/fn_dot.hpp | 1
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/fn_eye.hpp | 26
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/fn_hist.hpp |only
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/fn_histc.hpp |only
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/fn_max.hpp | 151 --
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/fn_mean.hpp | 150 --
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/fn_median.hpp | 220 ---
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/fn_min.hpp | 152 --
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/fn_misc.hpp | 2
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/fn_norm.hpp | 357 +++--
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/fn_ones.hpp | 44
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/fn_princomp.hpp | 7
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/fn_prod.hpp | 141 --
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/fn_randn.hpp | 45
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/fn_randu.hpp | 42
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/fn_stddev.hpp | 123 --
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/fn_strans.hpp | 62 -
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/fn_sum.hpp | 105 -
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/fn_trans.hpp | 65 -
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/fn_var.hpp | 120 -
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/fn_zeros.hpp | 42
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/forward_bones.hpp | 38
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/gemm.hpp | 8
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/gemv.hpp | 1
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/glue_hist_bones.hpp |only
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/glue_hist_meat.hpp |only
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/glue_histc_bones.hpp |only
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/glue_histc_meat.hpp |only
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/glue_mixed_meat.hpp | 132 +-
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/glue_relational_meat.hpp | 20
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/glue_solve_bones.hpp | 6
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/glue_solve_meat.hpp | 47
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/glue_times_bones.hpp | 57
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/glue_times_meat.hpp | 310 +++--
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/injector_bones.hpp | 4
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/injector_meat.hpp | 10
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/memory.hpp |only
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/mtGlue_bones.hpp | 7
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/mtOp_bones.hpp | 3
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/op_dot_bones.hpp | 6
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/op_dot_meat.hpp | 6
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/op_hist_bones.hpp |only
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/op_hist_meat.hpp |only
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/op_max_bones.hpp | 25
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/op_max_meat.hpp | 390 ++++--
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/op_mean_bones.hpp | 48
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/op_mean_meat.hpp | 299 +++-
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/op_median_bones.hpp | 50
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/op_median_meat.hpp | 436 +++----
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/op_min_bones.hpp | 27
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/op_min_meat.hpp | 402 ++++--
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/op_misc_meat.hpp | 100 +
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/op_prod_bones.hpp | 10
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/op_prod_meat.hpp | 137 ++
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/op_relational_meat.hpp | 40
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/op_repmat_meat.hpp | 70 -
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/op_sum_meat.hpp | 119 +
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/op_var_bones.hpp | 32
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/op_var_meat.hpp | 287 ++--
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/operator_div.hpp | 74 -
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/operator_minus.hpp | 81 -
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/operator_plus.hpp | 76 -
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/operator_relational.hpp | 202 ++-
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/operator_schur.hpp | 34
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/operator_times.hpp | 88 -
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/podarray_bones.hpp | 9
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/podarray_meat.hpp | 75 +
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/restrictors.hpp | 21
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/strip.hpp | 29
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/subview_bones.hpp | 63 -
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/subview_cube_bones.hpp | 12
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/subview_cube_meat.hpp | 61 -
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/subview_elem1_bones.hpp | 26
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/subview_elem1_meat.hpp | 59
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/subview_elem2_bones.hpp |only
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/subview_elem2_meat.hpp |only
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/subview_field_bones.hpp | 12
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/subview_field_meat.hpp | 54
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/subview_meat.hpp | 448 +++++--
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/traits.hpp | 311 ++++-
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/unwrap.hpp | 94 -
RcppArmadillo-0.3.0/RcppArmadillo/inst/include/armadillo_bits/unwrap_cube.hpp | 2
132 files changed, 6470 insertions(+), 4026 deletions(-)
Title: Statistical inference for partially observed Markov processes
Diff between pomp versions 0.41-1 dated 2012-04-02 and 0.41-3 dated 2012-04-11
Description: Inference methods for partially-observed Markov processes
Author: Aaron A. King, Edward L. Ionides, Carles Breto, Steve Ellner,
Bruce Kendall, Helen Wearing, Matthew J. Ferrari, Michael
Lavine, Daniel C. Reuman
Maintainer: Aaron A. King
pomp-0.41-1/pomp/inst/doc/Makefile |only
pomp-0.41-1/pomp/inst/doc/manual.Rnw |only
pomp-0.41-1/pomp/inst/doc/manual.pdf |only
pomp-0.41-1/pomp/inst/examples/gompertz.R |only
pomp-0.41-1/pomp/inst/examples/logistic.R |only
pomp-0.41-1/pomp/inst/examples/rw2.R |only
pomp-0.41-1/pomp/inst/examples/sir.R |only
pomp-0.41-3/pomp/.Rinstignore | 1
pomp-0.41-3/pomp/DESCRIPTION | 13
pomp-0.41-3/pomp/MD5 | 84 +--
pomp-0.41-3/pomp/NAMESPACE | 2
pomp-0.41-3/pomp/R/bsmc.R | 44 +-
pomp-0.41-3/pomp/R/compare-mif.R | 2
pomp-0.41-3/pomp/R/trajectory-pomp.R | 62 --
pomp-0.41-3/pomp/data/LondonYorke.rda |binary
pomp-0.41-3/pomp/data/bbs.rda |binary
pomp-0.41-3/pomp/data/blowflies.rda |binary
pomp-0.41-3/pomp/data/dacca.rda |binary
pomp-0.41-3/pomp/data/euler.sir.rda |binary
pomp-0.41-3/pomp/data/gillespie.sir.rda |binary
pomp-0.41-3/pomp/data/gompertz.rda |binary
pomp-0.41-3/pomp/data/ou2.rda |binary
pomp-0.41-3/pomp/data/ricker.rda |binary
pomp-0.41-3/pomp/data/rw2.rda |binary
pomp-0.41-3/pomp/data/verhulst.rda |binary
pomp-0.41-3/pomp/demo |only
pomp-0.41-3/pomp/inst/NEWS | 11
pomp-0.41-3/pomp/inst/TODO | 2
pomp-0.41-3/pomp/inst/data-R/sir.R | 14
pomp-0.41-3/pomp/inst/doc/advanced_topics_in_pomp.pdf |binary
pomp-0.41-3/pomp/inst/doc/index.html | 3
pomp-0.41-3/pomp/inst/doc/intro_to_pomp.Rnw | 10
pomp-0.41-3/pomp/inst/doc/intro_to_pomp.pdf |binary
pomp-0.41-3/pomp/inst/examples/gompertz.c | 25 -
pomp-0.41-3/pomp/inst/examples/ou2.c | 2
pomp-0.41-3/pomp/inst/examples/sir.c | 4
pomp-0.41-3/pomp/inst/include/pomp.h | 4
pomp-0.41-3/pomp/man/bsmc.Rd | 2
pomp-0.41-3/pomp/man/trajectory-pomp.Rd | 2
pomp-0.41-3/pomp/src/lookup_table.c | 1
pomp-0.41-3/pomp/src/lpa.c | 42 -
pomp-0.41-3/pomp/src/pomp.h | 4
pomp-0.41-3/pomp/src/pomp_internal.h | 2
pomp-0.41-3/pomp/src/skeleton.c | 386 +++++++-----------
pomp-0.41-3/pomp/src/trajectory.c | 81 ++-
pomp-0.41-3/pomp/tests/bbs.R |only
pomp-0.41-3/pomp/tests/bbs.Rout.save |only
47 files changed, 384 insertions(+), 419 deletions(-)
Title: Tools to manage a parametric function that describes phenology
Diff between phenology versions 3.28 dated 2012-04-08 and 3.29 dated 2012-04-11
Description: Functions to fit and test the phenology of species based
on counts.
Author: Marc Girondot
Maintainer: Marc Girondot
DESCRIPTION | 11 ++++---
MD5 | 47 ++++++++++++++++++---------------
NAMESPACE | 2 +
NEWS |only
R/BE_to_LBLE.R | 2 -
R/add_format.R | 2 -
R/compare_AIC.R |only
R/fit_phenology.R | 2 -
R/map_phenology.R | 4 +-
R/moon_phase.R |only
R/par_init.R | 2 -
R/phenology-package.R | 7 ++---
R/phenology.R | 4 +-
R/plot_delta.R | 16 ++++++-----
R/plot_phenology.R | 65 ++++++++++++++++++++++++++++++++++++++++-------
R/shift_sinusoid.R | 4 +-
data/map_Gratiot.rda |binary
man/BE_to_LBLE.Rd | 2 -
man/add_format.Rd | 2 -
man/compare_AIC.Rd |only
man/fit_phenology.Rd | 2 -
man/moon_phase.Rd |only
man/par_init.Rd | 2 -
man/phenology-package.Rd | 4 +-
man/phenology.Rd | 4 +-
man/plot_phenology.Rd | 18 ++++++++++---
man/shift_sinusoid.Rd | 4 +-
27 files changed, 137 insertions(+), 69 deletions(-)
Title: Mixture Model Distance Sampling (mmds)
Diff between mmds versions 1.0 dated 2012-01-13 and 1.1 dated 2012-04-11
Description: This library implements mixture model distance sampling
methods. See Miller and Thomas (in prep.).
Author: David Lawrence Miller
Maintainer: David Lawrence Miller
mmds-1.0/mmds/man/mmds.Rd |only
mmds-1.1/mmds/CHANGES |only
mmds-1.1/mmds/DESCRIPTION | 15 +++-
mmds-1.1/mmds/MD5 | 46 +++++++-------
mmds-1.1/mmds/NAMESPACE | 12 ---
mmds-1.1/mmds/R/fitmix.R | 68 ++++++++++++++++-----
mmds-1.1/mmds/R/getpars.R | 19 +++--
mmds-1.1/mmds/R/inv.reparam.pi.R | 25 +++++++
mmds-1.1/mmds/R/mmds-package.R |only
mmds-1.1/mmds/R/plot.ds.mixture.R | 96 +++++++++++++++++++++++-------
mmds-1.1/mmds/R/reparam.pi.R | 24 +++++++
mmds-1.1/mmds/R/sim.mix.R | 34 ++++++++++
mmds-1.1/mmds/R/step.ds.mixture.R | 30 +++++++++
mmds-1.1/mmds/R/summary.ds.mixture.R | 37 +++++++++--
mmds-1.1/mmds/R/varNp.R | 4 -
mmds-1.1/mmds/man/ds.mixture.Rd | 83 ++++++++++++++------------
mmds-1.1/mmds/man/fitmix.Rd | 102 ++++++++++++++++++++++----------
mmds-1.1/mmds/man/getpars.Rd | 35 +++++-----
mmds-1.1/mmds/man/inv.reparam.pi.Rd |only
mmds-1.1/mmds/man/mmds.gof.Rd | 23 ++++---
mmds-1.1/mmds/man/mmds.pars.Rd | 56 ++++++++++-------
mmds-1.1/mmds/man/plot.ds.mixture.Rd | 99 +++++++++++++++++++++----------
mmds-1.1/mmds/man/reparam.pi.Rd | 42 +++++++------
mmds-1.1/mmds/man/sim.mix.Rd | 70 +++++++++++++--------
mmds-1.1/mmds/man/step.ds.mixture.Rd | 38 ++++++-----
mmds-1.1/mmds/man/summary.ds.mixture.Rd | 38 +++++++----
26 files changed, 691 insertions(+), 305 deletions(-)
Title: Markdown rendering for R
Diff between markdown versions 0.3 dated 2012-04-05 and 0.4 dated 2012-04-11
Description: Markdown is a plain-text formatting syntax that can be
converted to XHTML or other formats. This package provides R
bindings to the Sundown markdown rendering library.
Author: JJ Allaire, Jeffrey Horner, Vicent Marti, and Natacha Porte
Maintainer: JJ Allaire
markdown-0.3/markdown/.gitignore |only
markdown-0.3/markdown/README.md |only
markdown-0.3/markdown/markdown.Rproj |only
markdown-0.4/markdown/DESCRIPTION | 8
markdown-0.4/markdown/MD5 | 42 +-
markdown-0.4/markdown/NAMESPACE | 3
markdown-0.4/markdown/NEWS |only
markdown-0.4/markdown/R/renderMarkdown.R | 40 ++
markdown-0.4/markdown/inst/include/markdown_rstubs.c | 104 ++++--
markdown-0.4/markdown/inst/include/markdown_rstubs.h | 98 +++---
markdown-0.4/markdown/man/markdown.Rd | 4
markdown-0.4/markdown/man/markdownExtensions.Rd | 3
markdown-0.4/markdown/man/markdownHTMLOptions.Rd | 14
markdown-0.4/markdown/man/renderMarkdown.Rd | 2
markdown-0.4/markdown/man/smartypants.Rd |only
markdown-0.4/markdown/src/Rinit.c | 13
markdown-0.4/markdown/src/Rmarkdown.c | 287 +++++++++++++------
markdown-0.4/markdown/src/Rmarkdown.h | 25 -
markdown-0.4/markdown/src/buffer.c | 14
markdown-0.4/markdown/src/houdini_href_e.c | 1
markdown-0.4/markdown/src/houdini_html_e.c | 1
markdown-0.4/markdown/src/markdown.c | 6
markdown-0.4/markdown/src/sundown_version.h | 2
markdown-0.4/markdown/tests/tests.R | 7
markdown-0.4/markdown/tests/tests.Rout.save | 44 ++
25 files changed, 499 insertions(+), 219 deletions(-)