Title: Design and analysis of observational studies
Diff between osDesign versions 1.5 dated 2011-08-24 and 1.6 dated 2012-05-23
Description: The osDesign serves for planning an observational study.
Currently, functionality is focused on the two-phase and
case-control designs. Functions in this packages provides Monte
Carlo based evaluation of operating characteristics such as
powers for estimators of the components of a logistic
regression model.
Author: Sebastien Haneuse, Takumi Saegusa, Nilanjan Chaterjee, Norman
Breslow
Maintainer: Sebastien Haneuse
DESCRIPTION | 6 +--
MD5 | 94 ++++++++++++++++++++++++++--------------------------
R/ML.R | 95 +++++++++++++++++++++++++++++++++++++++++++++--------
R/PL.R | 3 -
R/WL.R | 3 -
R/beta0.R | 7 ++-
R/beta0eval.R | 21 +++++++----
R/ccChecks.R | 1
R/ccPower.R | 1
R/ccSim.R | 1
R/coreChecks.R | 1
R/evalOC.R | 45 +++++++++++++------------
R/evalPower.R | 1
R/expandCatX.R | 1
R/expit.R | 1
R/hdp.R | 1
R/keepOC.R | 1
R/lagrad.R | 1
R/lagrange.R | 1
R/lnsrch.R | 1
R/logit.R | 1
R/phaseI.R | 1
R/phaseIChecks.R | 1
R/plotPower.R | 1
R/print.ccPower.R | 1
R/print.ccSim.R | 1
R/print.tpsPower.R | 1
R/print.tpsSim.R | 1
R/rmvhyper.R | 1
R/s2.R | 1
R/strReverse.R | 1
R/stratify.R | 1
R/summary.tps.R | 1
R/tps.R | 6 +--
R/tpsChecks.R | 1
R/tpsPower.R | 6 ++-
R/tpsSim.R | 20 ++++++++---
man/Ohio.Rd | 3 +
man/beta0.Rd | 9 +++--
man/ccPower.Rd | 3 +
man/ccSim.Rd | 3 +
man/infants.Rd | 2 -
man/phaseI.Rd | 2 -
man/plotPower.Rd | 2 -
man/rmvhyper.Rd | 2 -
man/tps.Rd | 22 ++++++++++--
man/tpsPower.Rd | 11 ++++--
man/tpsSim.Rd | 8 +++-
48 files changed, 247 insertions(+), 152 deletions(-)
Title: General Non-linear Optimization
Diff between Rsolnp versions 1.11 dated 2011-07-30 and 1.12 dated 2012-05-23
Description: General Non-linear Optimization Using Augmented Lagrange
Multiplier Method
Author: Alexios Ghalanos and Stefan Theussl
Maintainer: Alexios Ghalanos
Rsolnp-1.11/Rsolnp/data/datalist |only
Rsolnp-1.12/Rsolnp/ChangeLog | 4 ++++
Rsolnp-1.12/Rsolnp/DESCRIPTION | 12 ++++++------
Rsolnp-1.12/Rsolnp/MD5 |only
Rsolnp-1.12/Rsolnp/R/subnp.R | 8 ++++----
Rsolnp-1.12/Rsolnp/R/zzz.R | 11 +++++------
Rsolnp-1.12/Rsolnp/data/dji30ret.rda |binary
Rsolnp-1.12/Rsolnp/man/Rsolnp-package.Rd | 4 ++--
8 files changed, 21 insertions(+), 18 deletions(-)
Title: Analysis of Oceanographic data
Diff between oce versions 0.8-7 dated 2012-04-05 and 0.8-8 dated 2012-05-23
Description: Supports the analysis of Oceanographic data, including ADP
measurements, CTD measurements, sectional data, sea-level time
series, coastline files, etc. Provides functions for
calculating seawater properties such as potential temperature
and density, as well as derived properties such as buoyancy
frequency and dynamic height.
Author: Dan Kelley
Maintainer: Dan Kelley
oce-0.8-7/oce/inst/doc/a03.png |only
oce-0.8-7/oce/inst/doc/oce-adpfig.pdf |only
oce-0.8-7/oce/inst/doc/oce-ctdfig.pdf |only
oce-0.8-7/oce/inst/doc/oce-ctdrawfig.pdf |only
oce-0.8-7/oce/inst/doc/oce-ptfig.pdf |only
oce-0.8-7/oce/inst/doc/oce-sealevelfig.pdf |only
oce-0.8-7/oce/inst/doc/oce-sectionfiga03.pdf |only
oce-0.8-7/oce/inst/doc/oce-topofig.pdf |only
oce-0.8-7/oce/inst/doc/pt.png |only
oce-0.8-7/oce/inst/doc/rdi-beams.jpg |only
oce-0.8-7/oce/inst/doc/sealevel.png |only
oce-0.8-7/oce/inst/doc/topo.png |only
oce-0.8-7/oce/man/tdrAtm.Rd |only
oce-0.8-8/oce/.gitignore | 1
oce-0.8-8/oce/DESCRIPTION | 8
oce-0.8-8/oce/MD5 | 165 +--
oce-0.8-8/oce/NAMESPACE | 14
oce-0.8-8/oce/NEWS | 11
oce-0.8-8/oce/R/adp.R | 284 +++--
oce-0.8-8/oce/R/adp.rdi.R | 20
oce-0.8-8/oce/R/adv.R | 1
oce-0.8-8/oce/R/cm.R | 5
oce-0.8-8/oce/R/coastline.R | 44
oce-0.8-8/oce/R/ctd.R | 283 +++--
oce-0.8-8/oce/R/imagep.R | 79 +
oce-0.8-8/oce/R/misc.R | 93 +
oce-0.8-8/oce/R/moon.R |only
oce-0.8-8/oce/R/section.R | 31
oce-0.8-8/oce/R/sun.R | 48
oce-0.8-8/oce/R/sw.R | 92 +
oce-0.8-8/oce/R/teos.R |only
oce-0.8-8/oce/R/tidem.R | 1
oce-0.8-8/oce/R/zzz.R | 24
oce-0.8-8/oce/data/cm.rda |only
oce-0.8-8/oce/data/datalist | 1
oce-0.8-8/oce/inst/doc/.Rhistory | 1199 ++++++++++-------------
oce-0.8-8/oce/inst/doc/oce.pdf |binary
oce-0.8-8/oce/man/as.coastline.Rd | 40
oce-0.8-8/oce/man/beamUnattenuateAdp.Rd | 8
oce-0.8-8/oce/man/cm.Rd |only
oce-0.8-8/oce/man/ctd-class.Rd | 18
oce-0.8-8/oce/man/drawIsopycnals.Rd | 4
oce-0.8-8/oce/man/drifter.Rd | 4
oce-0.8-8/oce/man/eclipticalToEquatorial.Rd |only
oce-0.8-8/oce/man/equatorialToLocalHorizontal.Rd |only
oce-0.8-8/oce/man/figures/Makefile | 2
oce-0.8-8/oce/man/figures/starCoords.R |only
oce-0.8-8/oce/man/formatPosition.Rd | 2
oce-0.8-8/oce/man/grad.Rd |only
oce-0.8-8/oce/man/imagep.Rd | 11
oce-0.8-8/oce/man/integrateTrapezoid.Rd |only
oce-0.8-8/oce/man/julianCenturyAnomaly.Rd |only
oce-0.8-8/oce/man/julianDay.Rd |only
oce-0.8-8/oce/man/met.Rd | 8
oce-0.8-8/oce/man/moonAngle.Rd |only
oce-0.8-8/oce/man/munk.Rd | 2
oce-0.8-8/oce/man/oce.plot.sticks.Rd | 6
oce-0.8-8/oce/man/oceBisect.Rd | 2
oce-0.8-8/oce/man/plot.adv.Rd | 6
oce-0.8-8/oce/man/plot.cm.Rd | 4
oce-0.8-8/oce/man/plot.coastline.Rd | 11
oce-0.8-8/oce/man/plot.ctd.Rd | 11
oce-0.8-8/oce/man/plot.drifter.Rd | 6
oce-0.8-8/oce/man/plot.echosounder.Rd | 6
oce-0.8-8/oce/man/plot.section.Rd | 8
oce-0.8-8/oce/man/plotProfile.Rd | 45
oce-0.8-8/oce/man/plotScan.Rd | 8
oce-0.8-8/oce/man/plotTS.Rd | 26
oce-0.8-8/oce/man/prettyPosition.Rd |only
oce-0.8-8/oce/man/read.cm.Rd | 3
oce-0.8-8/oce/man/redfieldNC.Rd | 1
oce-0.8-8/oce/man/redfieldNP.Rd | 4
oce-0.8-8/oce/man/redfieldPlankton.Rd | 3
oce-0.8-8/oce/man/resizableLabel.Rd | 1
oce-0.8-8/oce/man/retime.Rd | 10
oce-0.8-8/oce/man/riley.Rd | 23
oce-0.8-8/oce/man/sealevelHalifax.Rd | 24
oce-0.8-8/oce/man/siderealTime.Rd |only
oce-0.8-8/oce/man/soi.Rd | 2
oce-0.8-8/oce/man/subtractBottomVelocity.Rd |only
oce-0.8-8/oce/man/summary.adv.Rd | 6
oce-0.8-8/oce/man/summary.cm.Rd | 3
oce-0.8-8/oce/man/summary.coastline.Rd | 6
oce-0.8-8/oce/man/summary.drifter.Rd | 6
oce-0.8-8/oce/man/summary.echosounder.Rd | 6
oce-0.8-8/oce/man/sunAngle.Rd | 43
oce-0.8-8/oce/man/swAbsoluteSalinity.Rd |only
oce-0.8-8/oce/man/swConservativeTemperature.Rd |only
oce-0.8-8/oce/man/swRho.Rd | 26
oce-0.8-8/oce/man/swSTrho.Rd | 4
oce-0.8-8/oce/man/swTSrho.Rd | 5
oce-0.8-8/oce/man/tdrPatm.Rd |only
oce-0.8-8/oce/man/tdrTrim.Rd | 10
oce-0.8-8/oce/man/teos.Rd |only
oce-0.8-8/oce/man/teosSetLibrary.Rd |only
oce-0.8-8/oce/man/tidem.Rd | 4
oce-0.8-8/oce/man/wilson.Rd | 3
oce-0.8-8/oce/src/gradient.c |only
oce-0.8-8/oce/src/sfm_enu.c | 4
oce-0.8-8/oce/src/sw.c | 87 +
oce-0.8-8/oce/src/teos.c |only
oce-0.8-8/oce/src/trap.c |only
oce-0.8-8/oce/tests/astronomical.R |only
oce-0.8-8/oce/tests/eos.R | 23
104 files changed, 1693 insertions(+), 1256 deletions(-)
Title: Analysis of diffusion weighted imaging (DWI) data
Diff between dti versions 1.0-0.1 dated 2011-12-07 and 1.0-3 dated 2012-05-23
Description: Diffusion Weighted Imaging (DWI) is a Magnetic Resonance
Imaging modality, that measures diffusion of water in tissues
like the human brain. The package contains R-functions to
process diffusion-weighted data. The functionality includes
diffusion tensor imaging (DTI), structural adaptive smoothing
in in case of (DTI) (K. Tabelow, J. Polzehl, V. Spokoiny, and
H.U. Voss, Diffusion Tensor Imaging: Structural Adaptive
Smoothing, Neuroimage 39(4), 1763-1773 (2008)), modeling for
high angular resolution diffusion weighted imaging (HARDI)
using Q-ball-reconstruction and tensor mixture models and a
stremaline fiber tracking for tensor and tensor mixture models.
The package provides functionality to manipulate and visualize
results in 2D and 3D.
Author: Karsten Tabelow
Maintainer: Karsten Tabelow
DESCRIPTION | 38 +-
HISTORY | 19 +
MD5 | 68 ++--
NAMESPACE | 5
R/Classes.r | 2
R/aws.r | 5
R/aws2.r | 7
R/awsse3.r | 129 ++++----
R/dti.r | 129 ++++----
R/io.r | 253 +++++++++------
R/misc.r | 27 +
R/mixtensorpl.r | 159 +++++++--
R/parallel.r |only
R/paramse3.r | 16 -
R/plot.r | 6
R/ricebias.r | 40 ++
R/show3d.r | 4
R/smse3misc.r | 261 ++++++++++++----
R/utilities.r | 94 ++++-
R/varest.r | 97 ++++++
man/awssigmc.Rd |only
man/dtiIndices-methods.Rd | 4
man/dtiTensor-methods.Rd | 4
man/dwi.smooth-methods.Rd | 16 -
man/dwiMixtensor-methods.Rd | 5
man/extract-methods.Rd | 4
man/getmask-methods.Rd |only
man/pmatrix.Rd |only
man/readDWIdata.Rd | 5
src/aniso.f | 633 ++++++++++++++++++++++++---------------
src/bessel.c | 9
src/fibers.f | 2
src/misc.f | 41 ++
src/mixtens.f | 316 ++++++++++++++++---
src/mixtensorpl.c | 68 ++--
src/nlrdtirg.f | 61 ++-
src/smse3.f | 700 +++++++++++++++++++++-----------------------
37 files changed, 2090 insertions(+), 1137 deletions(-)
Title: Exploratory Chemometrics for Spectroscopy
Diff between ChemoSpec versions 1.50-2 dated 2012-01-04 and 1.51-0 dated 2012-05-23
Description: A collection of functions for plotting spectra (NMR, IR
etc) and carrying out various forms of top-down exploratory
data analysis, such as HCA, PCA and model-based clustering.
The design allows comparison of data from samples which fall
into groups such as treatment vs. control. Robust methods
appropriate for this type of high-dimensional data are
available. ChemoSpec is designed to be very user friendly and
suitable for people with limited background in R.
Author: Bryan A. Hanson DePauw University, Greencastle Indiana USA
Maintainer: Bryan A. Hanson
DESCRIPTION | 21 ++++++++++-----
MD5 | 63 ++++++++++++++++++++++++----------------------
NAMESPACE | 3 +-
NEWS | 13 +++++++++
R/plotScree2.R |only
R/removeGroup.R |only
R/removeSample.R | 3 +-
R/sPlotSpectra.R | 4 --
inst/doc/ChemoSpec.Rnw |only
inst/doc/ChemoSpec.pdf |binary
man/ChemoSpec-package.Rd | 4 +-
man/LoopThruSpectra.Rd | 2 -
man/aovPCA.Rd | 10 +++++--
man/aovPCAloadings.Rd | 4 +-
man/aovPCAscores.Rd | 4 +-
man/avgFacLvls.Rd | 4 +-
man/baselineSpec.Rd | 11 ++++----
man/classPCA.Rd | 6 ++--
man/colLeaf.Rd | 1
man/hcaScores.Rd | 6 ++--
man/hcaSpectra.Rd | 4 +-
man/hmapSpectra.Rd | 12 +++-----
man/pcaBoot.Rd | 4 +-
man/pcaDiag.Rd | 6 ++--
man/plot2Loadings.Rd | 6 ++--
man/plotLoadings.Rd | 8 ++---
man/plotScores.Rd | 6 ++--
man/plotScree.Rd | 17 +++++++-----
man/removeFreq.Rd | 7 +++++
man/removeSample.Rd | 11 +++++---
man/robPCA.Rd | 6 ++--
man/sPlotSpectra.Rd | 5 ++-
man/specSurvey.Rd | 2 -
man/splitSpectraGroups.Rd | 11 +++++---
34 files changed, 155 insertions(+), 109 deletions(-)
Title: Optimal stratification of sampling frames for multipurpose
sampling surveys
Diff between SamplingStrata versions 0.9-2 dated 2012-01-24 and 0.9-3 dated 2012-05-23
More information about SamplingStrata at CRAN
Description: In the field of sampling design (in particular for
stratified sampling), this package offers an approach for the
determination of the best stratification of a sampling frame,
the one that ensures the minimum sample size under the
condition to satisfy precision constraints in a multivariate
and multidomain case. This approach is based on the use of the
genetic algorithm: each solution (i.e. a particular partition
in strata of the sampling frame) is considered as an individual
in a population; the fitness of all individuals is evaluated by
calculating (using the Bethel-Chromy algorithm) the sampling
size satisfying accuracy constraints on the target estimates.
Functions in the package allows to: (a) analyse the obtained
results of the optimisation step; (b) assign the new strata
labels to the sampling frame; (c) select a sample from the new
frame accordingly to the best allocation. There is also a
function that allows to build the most important input to the
optimisation step, i.e. the "strata" dataframe, containing
information (means and standard errors) regarding the
distributions of the target variables in the different strata,
using the sampling frame or using data from previous rounds of
the same survey. As auxiliary variables that concur to the
stratification can be only of the categorical type, the package
offers a function ("var.bin") that allows to transform
continuous variables into categorical ordinal ones by applying
a k-means univariate clustering method. Functions for the
execution of the genetic algorithm are a modified version of
the functions in the "genalg" package.
Author: Giulio Barcaroli
Maintainer: Giulio Barcaroli
DESCRIPTION | 8
MD5 | 46 +--
R/Bethel.r | 7
R/aggrStrata.r | 7
R/buildStrataDF.R | 7
R/checkInput.R | 127 +++++----
R/optimizeStrata.R | 17 -
R/rbgaV2.R | 470 ++++++++++++++++++-----------------
R/selectSample.R | 29 +-
R/strataGenalg.R | 23 +
R/updateFrame.R | 15 -
R/updateStrata.r | 22 -
R/verify.R | 5
data/swissmunicipalities.rda |only
inst/doc/SamplingStrataVignette.Rnw | 4
inst/doc/SamplingStrataVignette.pdf |binary
man/bethel.Rd | 4
man/buildStrataDF.Rd | 1
man/checkInput.Rd | 2
man/optimizeStrata.Rd | 68 ++---
man/swissmunicipalities.Rd |only
man/var.bin.Rd | 10
man/verify.Rd | 8
vignettes/SamplingStrata.bib | 58 ++--
vignettes/SamplingStrataVignette.Rnw | 16 -
25 files changed, 513 insertions(+), 441 deletions(-)
Permanent link
Title: R binding for cppbugs
Diff between rcppbugs versions 0.0.8 dated 2012-04-27 and 0.1.0 dated 2012-05-23
Description: R binding for cppbugs
Author: Whit Armstrong
Maintainer: Whit Armstrong
DESCRIPTION | 6
MD5 | 60 +++--
NAMESPACE | 3
R/cppbugs.R | 141 ++++++++++++-
man/deterministic.Rd | 10
man/mcmc.distributions.Rd | 13 -
man/run.model.Rd | 8
src/assign.beta.logp.h |only
src/cppbugs/.git | 2
src/cppbugs/cppbugs/cppbugs.hpp | 1
src/cppbugs/cppbugs/mcmc.bernoulli.hpp | 46 ----
src/cppbugs/cppbugs/mcmc.beta.hpp |only
src/cppbugs/cppbugs/mcmc.binomial.hpp | 2
src/cppbugs/cppbugs/mcmc.deterministic.hpp | 1
src/cppbugs/cppbugs/mcmc.dynamic.hpp | 2
src/cppbugs/cppbugs/mcmc.dynamic.stochastic.hpp | 3
src/cppbugs/cppbugs/mcmc.gamma.hpp | 2
src/cppbugs/cppbugs/mcmc.jump.hpp | 16 +
src/cppbugs/cppbugs/mcmc.math.hpp | 98 +++++----
src/cppbugs/cppbugs/mcmc.model.hpp | 80 +++++--
src/cppbugs/cppbugs/mcmc.multivariate.normal.hpp |only
src/cppbugs/cppbugs/mcmc.normal.hpp | 2
src/cppbugs/cppbugs/mcmc.object.hpp | 2
src/cppbugs/cppbugs/mcmc.observed.hpp | 2
src/cppbugs/cppbugs/mcmc.stochastic.hpp | 1
src/cppbugs/cppbugs/mcmc.uniform.hpp | 2
src/cppbugs/test/varying.coefs.global.prior.cpp | 4
src/distribution.types.h | 2
src/helpers.cpp | 9
src/helpers.h | 1
src/interface.cpp | 242 ++++++++++++++++++-----
src/linear.grouped.deterministic.h |only
src/r.deterministic.h | 37 ---
src/r.mcmc.model.h | 73 +++++-
34 files changed, 631 insertions(+), 240 deletions(-)
Title: A package performing Dynamic Bayesian Network inference.
Diff between G1DBN versions 3.0 dated 2012-03-01 and 3.1 dated 2012-05-23
Description: G1DBN performs DBN inference using 1st order conditional
dependencies.
Author: Sophie Lebre
Maintainer: Sophie Lebre
DESCRIPTION | 10 +++++-----
MD5 | 4 ++--
NAMESPACE | 2 +-
3 files changed, 8 insertions(+), 8 deletions(-)
Title: R MPFR - Multiple Precision Floating-Point Reliable
Diff between Rmpfr versions 0.4-7 dated 2012-05-16 and 0.4-8 dated 2012-05-23
Description: Rmpfr provides S4 classes and methods for arithmetic
including transcendental ("special") functions for arbitrary
precision floating point numbers. To this end, it interfaces to
the LGPL'ed MPFR (Multiple Precision Floating-Point Reliable)
Library which itself is based on the GMP (GNU Multiple
Precision) Library.
Author: Martin Maechler
Maintainer: Martin Maechler
Rmpfr-0.4-7/Rmpfr/inst/doc/2012-Rmpfr-ZurichR |only
Rmpfr-0.4-7/Rmpfr/inst/doc/_region_.tex |only
Rmpfr-0.4-7/Rmpfr/inst/doc/log1mexp-note_nb-mm3.pdf |only
Rmpfr-0.4-7/Rmpfr/outdated-man+vign.mail |only
Rmpfr-0.4-8/Rmpfr/ChangeLog | 5 +
Rmpfr-0.4-8/Rmpfr/DESCRIPTION | 10 +-
Rmpfr-0.4-8/Rmpfr/MD5 | 90 ++------------------
Rmpfr-0.4-8/Rmpfr/NAMESPACE | 6 +
Rmpfr-0.4-8/Rmpfr/R/mpfr.R | 47 ++++++++++
Rmpfr-0.4-8/Rmpfr/R/special-fun.R | 3
Rmpfr-0.4-8/Rmpfr/TODO | 3
Rmpfr-0.4-8/Rmpfr/inst/doc/Rmpfr-pkg.pdf |binary
Rmpfr-0.4-8/Rmpfr/inst/doc/log1mexp-note.Rnw | 2
Rmpfr-0.4-8/Rmpfr/inst/doc/log1mexp-note.pdf |binary
Rmpfr-0.4-8/Rmpfr/man/Bernoulli.Rd | 3
Rmpfr-0.4-8/Rmpfr/man/utils.Rd | 26 ++++-
16 files changed, 100 insertions(+), 95 deletions(-)
Title: Miscellaneous Qt-based utilities
Diff between qtutils versions 0.1-2 dated 2012-05-09 and 0.1-3 dated 2012-05-23
Description: Miscellaneous Qt-based tools for R
Author: Deepayan Sarkar
Maintainer: Deepayan Sarkar
DESCRIPTION | 6 +++---
MD5 | 4 ++--
src/createProject.sh | 4 ++--
3 files changed, 7 insertions(+), 7 deletions(-)
Title: Mixed GAM Computation Vehicle with GCV/AIC/REML smoothness
estimation
Diff between mgcv versions 1.7-16 dated 2012-04-30 and 1.7-17 dated 2012-05-23
Description: Routines for GAMs and other generalized ridge regression
with multiple smoothing parameter selection by GCV, REML or
UBRE/AIC. Also GAMMs. Includes a gam() function.
Author: Simon Wood
Maintainer: Simon Wood
DESCRIPTION | 6
MD5 | 24 +--
R/bam.r | 17 +-
R/fast-REML.r | 22 ++-
R/mgcv.r | 116 +++++++++++++-----
R/smooth.r | 204 ++++++++++++++++++++++++++------
changeLog | 29 ++++
man/anova.gam.Rd | 38 +++--
man/gam.Rd | 32 ++---
man/gam.check.Rd | 10 +
man/random.effects.Rd | 4
man/smooth.construct.mrf.smooth.spec.Rd | 2
man/summary.gam.Rd | 71 ++++++-----
13 files changed, 420 insertions(+), 155 deletions(-)
Title: Visualization of Categorical Response Models
Diff between EffectStars versions 1.0 dated 2012-03-06 and 1.1 dated 2012-05-23
Description: The package provides functions to visualize regression
models with categorical response. The effects of the covariates
are plotted with star plots in order to allow for an optical
impression of the fitted model.
Author: Gunther Schauberger
Maintainer:
DESCRIPTION | 6
EffectStars-Ex.R |only
MD5 | 29 +-
R/star.cumulative.R | 22 -
R/star.nominal.r | 12
R/star.nominalcat.R | 627 +++++++++++++++++++++++++++++++++++++++++++++++-
R/star.nominalglob.R | 506 ++++++++++++++++++++++++++++++++++++++
R/star.sequential.R | 9
inst/doc/alligator.Rnw | 6
inst/doc/alligator.pdf |binary
inst/doc/election.Rnw | 8
inst/doc/election.pdf |binary
man/star.cumulative.Rd | 2
man/star.nominal.Rd | 12
man/star.nominalcat.Rd | 10
man/star.nominalglob.Rd | 17 -
16 files changed, 1193 insertions(+), 73 deletions(-)
Title: R messaging using ActiveMQ and jms
Diff between Rjms versions 0.0.2 dated 2011-11-03 and 0.0.3 dated 2012-05-23
Description: This package uses rJava to publish messages to an activeMQ
queue or topic, implementing enterprise integration patterns.
Author: SMS Chauhan
Maintainer: SMS Chauhan
Rjms-0.0.2/Rjms/R/destroy.logger.R |only
Rjms-0.0.2/Rjms/R/initialize.logger.R |only
Rjms-0.0.2/Rjms/R/onLoad.R |only
Rjms-0.0.2/Rjms/R/to.logger.R |only
Rjms-0.0.2/Rjms/inst/java/RjmsProducer-0.0.3.jar |only
Rjms-0.0.3/Rjms/DESCRIPTION | 14 +-
Rjms-0.0.3/Rjms/MD5 | 23 ++--
Rjms-0.0.3/Rjms/NAMESPACE | 4
Rjms-0.0.3/Rjms/R/Rjms.R |only
Rjms-0.0.3/Rjms/inst/java/Rjms-0.0.3.jar |only
Rjms-0.0.3/Rjms/man/Rjms-package.Rd | 129 ++++++++++++-----------
Rjms-0.0.3/Rjms/man/consume.Rd |only
Rjms-0.0.3/Rjms/man/destroy.consumer.Rd |only
Rjms-0.0.3/Rjms/man/destroy.logger.Rd | 5
Rjms-0.0.3/Rjms/man/initialize.consumer.Rd |only
Rjms-0.0.3/Rjms/man/initialize.logger.Rd | 11 -
Rjms-0.0.3/Rjms/man/listen.Rd |only
Rjms-0.0.3/Rjms/man/to.logger.Rd | 17 +--
18 files changed, 110 insertions(+), 93 deletions(-)
Title: Linear and Nonlinear Mixed Effects Models
Diff between nlme versions 3.1-103 dated 2012-01-16 and 3.1-104 dated 2012-05-23
Description: Fit and compare Gaussian linear and nonlinear
mixed-effects models.
Author: Jose Pinheiro (S version), Douglas Bates (up to 2007), Saikat
DebRoy (up to 2002), Deepayan Sarkar (up to 2005), the R Core
team.
Maintainer: R-core
ChangeLog | 20 +++++++++++++++++++-
DESCRIPTION | 8 ++++----
MD5 | 16 ++++++++--------
inst/CITATION | 5 ++---
src/gnls.c | 2 +-
src/nlOptimizer.c | 12 +++++++-----
src/nlme.c | 4 ++--
src/nlmefit.c | 4 ++--
src/nlmefit.h | 2 +-
9 files changed, 46 insertions(+), 27 deletions(-)
Title: K Adaptive Partitioning for Survival data
Diff between kaps versions 0.9-2 dated 2012-04-16 and 0.9-3 dated 2012-05-23
Description: This package provides some routines to conduct the
K-adaptive parititioning (kaps) and recursive partitioning
(lrtree) for survival data, with the application to SEER
(Surveillance Epidemiology and End Results). A function kaps is
an implementation version of our algorithm kaps which provides
minimax based partitioing rule by log-rank test. A fuction
lrtree enables researchers to conduct log-rank survival tree
proposed by Segal (1988).
Author: Soo-Heang Eo and HyungJun Cho
Maintainer: Soo-Heang Eo
DESCRIPTION | 8 +++----
MD5 | 16 +++++++-------
NEWS | 8 +++++--
R/accessaries.R | 62 ++++++++++++++++++++++++++-----------------------------
R/apss.R | 1
R/apss.control.R | 4 ++-
R/kaps.R | 21 ++++++++++++++----
man/kaps.Rd | 2 -
man/prune.Rd | 2 -
9 files changed, 70 insertions(+), 54 deletions(-)
Title: Read Data Stored by Minitab, S, SAS, SPSS, Stata, Systat, dBase,
...
Diff between foreign versions 0.8-49 dated 2012-02-10 and 0.8-50 dated 2012-05-23
Description: Functions for reading and writing data stored by
statistical packages such as Minitab, S, SAS, SPSS, Stata,
Systat, ..., and for reading and writing dBase files.
Author: R Core Team [aut, cph, cre], Roger Bivand [ctb, cph], Vincent
J. Carey [ctb, cph], Saikat DebRoy [ctb, cph], Stephen Eglen
[ctb, cph], Rajarshi Guha [ctb, cph], Nicholas Lewin-Koh [ctb,
cph], Mark Myatt [ctb, cph], Ben Pfaff [ctb], Frank Warmerdam
[ctb, cph], Stephen Weigand [ctb, cph], Free Software
Foundation, Inc. [cph]. See the COPYRIGHTS file in the sources
for details on contributions and copyrights.
Maintainer: R Core Team
ChangeLog | 9 +++++++++
DESCRIPTION | 39 ++++++++++++++++++++++++++-------------
MD5 | 4 ++--
3 files changed, 37 insertions(+), 15 deletions(-)
Title: A community modeling foundation for Eco-Hydrology.
Diff between EcoHydRology versions 0.3.8 dated 2011-06-20 and 0.4.1 dated 2012-05-23
Description: This package provides a flexible foundation for
scientists, engineers, and policy makers to base teaching
exercises as well as for more applied use to model complex
eco-hydrological interactions.
Author: Fuka, DR, Walter, MT, and Easton, ZM
Maintainer: Daniel Fuka
EcoHydRology-0.3.8/EcoHydRology/src/1modparm.f |only
EcoHydRology-0.3.8/EcoHydRology/src/addh.f |only
EcoHydRology-0.3.8/EcoHydRology/src/albedo.f |only
EcoHydRology-0.3.8/EcoHydRology/src/allocate_parms.f |only
EcoHydRology-0.3.8/EcoHydRology/src/alph.f |only
EcoHydRology-0.3.8/EcoHydRology/src/analyse.f |only
EcoHydRology-0.3.8/EcoHydRology/src/anfert.f |only
EcoHydRology-0.3.8/EcoHydRology/src/apex_day.f |only
EcoHydRology-0.3.8/EcoHydRology/src/apply.f |only
EcoHydRology-0.3.8/EcoHydRology/src/ascrv.f |only
EcoHydRology-0.3.8/EcoHydRology/src/atri.f |only
EcoHydRology-0.3.8/EcoHydRology/src/aunif.f |only
EcoHydRology-0.3.8/EcoHydRology/src/autocal.f |only
EcoHydRology-0.3.8/EcoHydRology/src/autoirr.f |only
EcoHydRology-0.3.8/EcoHydRology/src/automet.f |only
EcoHydRology-0.3.8/EcoHydRology/src/aveval.f |only
EcoHydRology-0.3.8/EcoHydRology/src/bacteria.f |only
EcoHydRology-0.3.8/EcoHydRology/src/batchin.f |only
EcoHydRology-0.3.8/EcoHydRology/src/batchmain.f |only
EcoHydRology-0.3.8/EcoHydRology/src/bayes.f |only
EcoHydRology-0.3.8/EcoHydRology/src/buffer.f |only
EcoHydRology-0.3.8/EcoHydRology/src/calresidu.f |only
EcoHydRology-0.3.8/EcoHydRology/src/canopyint.f |only
EcoHydRology-0.3.8/EcoHydRology/src/caps.f |only
EcoHydRology-0.3.8/EcoHydRology/src/changepar.f |only
EcoHydRology-0.3.8/EcoHydRology/src/chkcst.f |only
EcoHydRology-0.3.8/EcoHydRology/src/clgen.f |only
EcoHydRology-0.3.8/EcoHydRology/src/clicon.f |only
EcoHydRology-0.3.8/EcoHydRology/src/closefiles.f |only
EcoHydRology-0.3.8/EcoHydRology/src/command.f |only
EcoHydRology-0.3.8/EcoHydRology/src/conapply.f |only
EcoHydRology-0.3.8/EcoHydRology/src/confert.f |only
EcoHydRology-0.3.8/EcoHydRology/src/copyfile.f |only
EcoHydRology-0.3.8/EcoHydRology/src/countobs.f |only
EcoHydRology-0.3.8/EcoHydRology/src/crackflow.f |only
EcoHydRology-0.3.8/EcoHydRology/src/crackvol.f |only
EcoHydRology-0.3.8/EcoHydRology/src/crpmd.f |only
EcoHydRology-0.3.8/EcoHydRology/src/curno.f |only
EcoHydRology-0.3.8/EcoHydRology/src/dailycn.f |only
EcoHydRology-0.3.8/EcoHydRology/src/deallocate_parms.f |only
EcoHydRology-0.3.8/EcoHydRology/src/decay.f |only
EcoHydRology-0.3.8/EcoHydRology/src/dormant.f |only
EcoHydRology-0.3.8/EcoHydRology/src/dstn1.f |only
EcoHydRology-0.3.8/EcoHydRology/src/ee.f |only
EcoHydRology-0.3.8/EcoHydRology/src/eiusle.f |only
EcoHydRology-0.3.8/EcoHydRology/src/enrsb.f |only
EcoHydRology-0.3.8/EcoHydRology/src/erfc.f |only
EcoHydRology-0.3.8/EcoHydRology/src/estimate_ksat.f |only
EcoHydRology-0.3.8/EcoHydRology/src/etact.f |only
EcoHydRology-0.3.8/EcoHydRology/src/etpot.f |only
EcoHydRology-0.3.8/EcoHydRology/src/expo.f |only
EcoHydRology-0.3.8/EcoHydRology/src/fert.f |only
EcoHydRology-0.3.8/EcoHydRology/src/filter.f |only
EcoHydRology-0.3.8/EcoHydRology/src/finalbal.f |only
EcoHydRology-0.3.8/EcoHydRology/src/functn.f |only
EcoHydRology-0.3.8/EcoHydRology/src/gasdev.f |only
EcoHydRology-0.3.8/EcoHydRology/src/gcycl.f |only
EcoHydRology-0.3.8/EcoHydRology/src/getallo.f |only
EcoHydRology-0.3.8/EcoHydRology/src/getallo2.f |only
EcoHydRology-0.3.8/EcoHydRology/src/getpnt.f |only
EcoHydRology-0.3.8/EcoHydRology/src/getpnt2.f |only
EcoHydRology-0.3.8/EcoHydRology/src/goc.f |only
EcoHydRology-0.3.8/EcoHydRology/src/grass_wway.f |only
EcoHydRology-0.3.8/EcoHydRology/src/graze.f |only
EcoHydRology-0.3.8/EcoHydRology/src/grow.f |only
EcoHydRology-0.3.8/EcoHydRology/src/gw_no3.f |only
EcoHydRology-0.3.8/EcoHydRology/src/gwmod.f |only
EcoHydRology-0.3.8/EcoHydRology/src/gwnutr.f |only
EcoHydRology-0.3.8/EcoHydRology/src/h2omgt_init.f |only
EcoHydRology-0.3.8/EcoHydRology/src/harvestop.f |only
EcoHydRology-0.3.8/EcoHydRology/src/harvgrainop.f |only
EcoHydRology-0.3.8/EcoHydRology/src/harvkillop.f |only
EcoHydRology-0.3.8/EcoHydRology/src/header.f |only
EcoHydRology-0.3.8/EcoHydRology/src/headout.f |only
EcoHydRology-0.3.8/EcoHydRology/src/hhnoqual.f |only
EcoHydRology-0.3.8/EcoHydRology/src/hhwatqual.f |only
EcoHydRology-0.3.8/EcoHydRology/src/hmeas.f |only
EcoHydRology-0.3.8/EcoHydRology/src/hruaa.f |only
EcoHydRology-0.3.8/EcoHydRology/src/hruallo.f |only
EcoHydRology-0.3.8/EcoHydRology/src/hruday.f |only
EcoHydRology-0.3.8/EcoHydRology/src/hrumon.f |only
EcoHydRology-0.3.8/EcoHydRology/src/hrupond.f |only
EcoHydRology-0.3.8/EcoHydRology/src/hruyr.f |only
EcoHydRology-0.3.8/EcoHydRology/src/hydroinit.f |only
EcoHydRology-0.3.8/EcoHydRology/src/impnd_init.f |only
EcoHydRology-0.3.8/EcoHydRology/src/impndaa.f |only
EcoHydRology-0.3.8/EcoHydRology/src/impndday.f |only
EcoHydRology-0.3.8/EcoHydRology/src/impndmon.f |only
EcoHydRology-0.3.8/EcoHydRology/src/impndyr.f |only
EcoHydRology-0.3.8/EcoHydRology/src/indexx.f |only
EcoHydRology-0.3.8/EcoHydRology/src/irr_rch.f |only
EcoHydRology-0.3.8/EcoHydRology/src/irr_res.f |only
EcoHydRology-0.3.8/EcoHydRology/src/irrigate.f |only
EcoHydRology-0.3.8/EcoHydRology/src/irrsub.f |only
EcoHydRology-0.3.8/EcoHydRology/src/jdt.f |only
EcoHydRology-0.3.8/EcoHydRology/src/killop.f |only
EcoHydRology-0.3.8/EcoHydRology/src/lakeq.f |only
EcoHydRology-0.3.8/EcoHydRology/src/latsed.f |only
EcoHydRology-0.3.8/EcoHydRology/src/lwqdef.f |only
EcoHydRology-0.3.8/EcoHydRology/src/main.f |only
EcoHydRology-0.3.8/EcoHydRology/src/nfix.f |only
EcoHydRology-0.3.8/EcoHydRology/src/nitvol.f |only
EcoHydRology-0.3.8/EcoHydRology/src/nlch.f |only
EcoHydRology-0.3.8/EcoHydRology/src/nminrl.f |only
EcoHydRology-0.3.8/EcoHydRology/src/noqual.f |only
EcoHydRology-0.3.8/EcoHydRology/src/npup.f |only
EcoHydRology-0.3.8/EcoHydRology/src/nrain.f |only
EcoHydRology-0.3.8/EcoHydRology/src/nup.f |only
EcoHydRology-0.3.8/EcoHydRology/src/nuts.f |only
EcoHydRology-0.3.8/EcoHydRology/src/oat.f |only
EcoHydRology-0.3.8/EcoHydRology/src/objfunctn.f |only
EcoHydRology-0.3.8/EcoHydRology/src/openwth.f |only
EcoHydRology-0.3.8/EcoHydRology/src/operatn.f |only
EcoHydRology-0.3.8/EcoHydRology/src/orgn.f |only
EcoHydRology-0.3.8/EcoHydRology/src/parasol.f |only
EcoHydRology-0.3.8/EcoHydRology/src/parasolc.f |only
EcoHydRology-0.3.8/EcoHydRology/src/parasoli.f |only
EcoHydRology-0.3.8/EcoHydRology/src/parasolo.f |only
EcoHydRology-0.3.8/EcoHydRology/src/parasolu.f |only
EcoHydRology-0.3.8/EcoHydRology/src/parstt2.f |only
EcoHydRology-0.3.8/EcoHydRology/src/percmacro.f |only
EcoHydRology-0.3.8/EcoHydRology/src/percmain.f |only
EcoHydRology-0.3.8/EcoHydRology/src/percmicro.f |only
EcoHydRology-0.3.8/EcoHydRology/src/pestlch.f |only
EcoHydRology-0.3.8/EcoHydRology/src/pestw.f |only
EcoHydRology-0.3.8/EcoHydRology/src/pesty.f |only
EcoHydRology-0.3.8/EcoHydRology/src/pgen.f |only
EcoHydRology-0.3.8/EcoHydRology/src/pgenhr.f |only
EcoHydRology-0.3.8/EcoHydRology/src/pkq.f |only
EcoHydRology-0.3.8/EcoHydRology/src/plantop.f |only
EcoHydRology-0.3.8/EcoHydRology/src/pmeas.f |only
EcoHydRology-0.3.8/EcoHydRology/src/pminrl.f |only
EcoHydRology-0.3.8/EcoHydRology/src/pond.f |only
EcoHydRology-0.3.8/EcoHydRology/src/pothole.f |only
EcoHydRology-0.3.8/EcoHydRology/src/psed.f |only
EcoHydRology-0.3.8/EcoHydRology/src/qman.f |only
EcoHydRology-0.3.8/EcoHydRology/src/ran1.f |only
EcoHydRology-0.3.8/EcoHydRology/src/ranked.f |only
EcoHydRology-0.3.8/EcoHydRology/src/rchaa.f |only
EcoHydRology-0.3.8/EcoHydRology/src/rchday.f |only
EcoHydRology-0.3.8/EcoHydRology/src/rchinit.f |only
EcoHydRology-0.3.8/EcoHydRology/src/rchmon.f |only
EcoHydRology-0.3.8/EcoHydRology/src/rchuse.f |only
EcoHydRology-0.3.8/EcoHydRology/src/rchyr.f |only
EcoHydRology-0.3.8/EcoHydRology/src/reachout.f |only
EcoHydRology-0.3.8/EcoHydRology/src/readatmodep.f |only
EcoHydRology-0.3.8/EcoHydRology/src/readbsn.f |only
EcoHydRology-0.3.8/EcoHydRology/src/readchan.f |only
EcoHydRology-0.3.8/EcoHydRology/src/readchm.f |only
EcoHydRology-0.3.8/EcoHydRology/src/readcnst.f |only
EcoHydRology-0.3.8/EcoHydRology/src/readfcst.f |only
EcoHydRology-0.3.8/EcoHydRology/src/readfert.f |only
EcoHydRology-0.3.8/EcoHydRology/src/readfig.f |only
EcoHydRology-0.3.8/EcoHydRology/src/readfile.f |only
EcoHydRology-0.3.8/EcoHydRology/src/readgw.f |only
EcoHydRology-0.3.8/EcoHydRology/src/readhru.f |only
EcoHydRology-0.3.8/EcoHydRology/src/readinpt.f |only
EcoHydRology-0.3.8/EcoHydRology/src/readlwq.f |only
EcoHydRology-0.3.8/EcoHydRology/src/readmetf.f |only
EcoHydRology-0.3.8/EcoHydRology/src/readmgt.f |only
EcoHydRology-0.3.8/EcoHydRology/src/readmon.f |only
EcoHydRology-0.3.8/EcoHydRology/src/readops.f |only
EcoHydRology-0.3.8/EcoHydRology/src/readpest.f |only
EcoHydRology-0.3.8/EcoHydRology/src/readplant.f |only
EcoHydRology-0.3.8/EcoHydRology/src/readpnd.f |only
EcoHydRology-0.3.8/EcoHydRology/src/readres.f |only
EcoHydRology-0.3.8/EcoHydRology/src/readrte.f |only
EcoHydRology-0.3.8/EcoHydRology/src/readsol.f |only
EcoHydRology-0.3.8/EcoHydRology/src/readsub.f |only
EcoHydRology-0.3.8/EcoHydRology/src/readswq.f |only
EcoHydRology-0.3.8/EcoHydRology/src/readtill.f |only
EcoHydRology-0.3.8/EcoHydRology/src/readurban.f |only
EcoHydRology-0.3.8/EcoHydRology/src/readwgn.f |only
EcoHydRology-0.3.8/EcoHydRology/src/readwus.f |only
EcoHydRology-0.3.8/EcoHydRology/src/readwwq.f |only
EcoHydRology-0.3.8/EcoHydRology/src/readyr.f |only
EcoHydRology-0.3.8/EcoHydRology/src/reccnst.f |only
EcoHydRology-0.3.8/EcoHydRology/src/recday.f |only
EcoHydRology-0.3.8/EcoHydRology/src/rechour.f |only
EcoHydRology-0.3.8/EcoHydRology/src/recmon.f |only
EcoHydRology-0.3.8/EcoHydRology/src/recyear.f |only
EcoHydRology-0.3.8/EcoHydRology/src/regres.f |only
EcoHydRology-0.3.8/EcoHydRology/src/rerun.f |only
EcoHydRology-0.3.8/EcoHydRology/src/rerunfile.f |only
EcoHydRology-0.3.8/EcoHydRology/src/rerunps.f |only
EcoHydRology-0.3.8/EcoHydRology/src/res.f |only
EcoHydRology-0.3.8/EcoHydRology/src/resbact.f |only
EcoHydRology-0.3.8/EcoHydRology/src/resinit.f |only
EcoHydRology-0.3.8/EcoHydRology/src/resnut.f |only
EcoHydRology-0.3.8/EcoHydRology/src/response.f |only
EcoHydRology-0.3.8/EcoHydRology/src/rewind_init.f |only
EcoHydRology-0.3.8/EcoHydRology/src/rhgen.f |only
EcoHydRology-0.3.8/EcoHydRology/src/route.f |only
EcoHydRology-0.3.8/EcoHydRology/src/routres.f |only
EcoHydRology-0.3.8/EcoHydRology/src/rsedaa.f |only
EcoHydRology-0.3.8/EcoHydRology/src/rseday.f |only
EcoHydRology-0.3.8/EcoHydRology/src/rsedmon.f |only
EcoHydRology-0.3.8/EcoHydRology/src/rsedyr.f |only
EcoHydRology-0.3.8/EcoHydRology/src/rtbact.f |only
EcoHydRology-0.3.8/EcoHydRology/src/rtday.f |only
EcoHydRology-0.3.8/EcoHydRology/src/rteinit.f |only
EcoHydRology-0.3.8/EcoHydRology/src/rthmusk.f |only
EcoHydRology-0.3.8/EcoHydRology/src/rthourly.f |only
EcoHydRology-0.3.8/EcoHydRology/src/rthpest.f |only
EcoHydRology-0.3.8/EcoHydRology/src/rthsed.f |only
EcoHydRology-0.3.8/EcoHydRology/src/rtmusk.f |only
EcoHydRology-0.3.8/EcoHydRology/src/rtout.f |only
EcoHydRology-0.3.8/EcoHydRology/src/rtover.f |only
EcoHydRology-0.3.8/EcoHydRology/src/rtpest.f |only
EcoHydRology-0.3.8/EcoHydRology/src/rtsed.f |only
EcoHydRology-0.3.8/EcoHydRology/src/sample.f |only
EcoHydRology-0.3.8/EcoHydRology/src/sample1.f |only
EcoHydRology-0.3.8/EcoHydRology/src/sat_excess.f |only
EcoHydRology-0.3.8/EcoHydRology/src/save.f |only
EcoHydRology-0.3.8/EcoHydRology/src/saveconc.f |only
EcoHydRology-0.3.8/EcoHydRology/src/scein.f |only
EcoHydRology-0.3.8/EcoHydRology/src/scestat.f |only
EcoHydRology-0.3.8/EcoHydRology/src/schedule_ops.f |only
EcoHydRology-0.3.8/EcoHydRology/src/sensin.f |only
EcoHydRology-0.3.8/EcoHydRology/src/sensmain.f |only
EcoHydRology-0.3.8/EcoHydRology/src/sim_initday.f |only
EcoHydRology-0.3.8/EcoHydRology/src/sim_inityr.f |only
EcoHydRology-0.3.8/EcoHydRology/src/simulate.f |only
EcoHydRology-0.3.8/EcoHydRology/src/slrgen.f |only
EcoHydRology-0.3.8/EcoHydRology/src/smeas.f |only
EcoHydRology-0.3.8/EcoHydRology/src/snom.f |only
EcoHydRology-0.3.8/EcoHydRology/src/soil_chem.f |only
EcoHydRology-0.3.8/EcoHydRology/src/soil_par.f |only
EcoHydRology-0.3.8/EcoHydRology/src/soil_phys.f |only
EcoHydRology-0.3.8/EcoHydRology/src/soil_write.f |only
EcoHydRology-0.3.8/EcoHydRology/src/solp.f |only
EcoHydRology-0.3.8/EcoHydRology/src/solt.f |only
EcoHydRology-0.3.8/EcoHydRology/src/sort1.f |only
EcoHydRology-0.3.8/EcoHydRology/src/sort3.f |only
EcoHydRology-0.3.8/EcoHydRology/src/sorteer.f |only
EcoHydRology-0.3.8/EcoHydRology/src/sorteer2.f |only
EcoHydRology-0.3.8/EcoHydRology/src/sorteer3.f |only
EcoHydRology-0.3.8/EcoHydRology/src/sorteer4.f |only
EcoHydRology-0.3.8/EcoHydRology/src/sorteer5.f |only
EcoHydRology-0.3.8/EcoHydRology/src/sorteer6.f |only
EcoHydRology-0.3.8/EcoHydRology/src/std1.f |only
EcoHydRology-0.3.8/EcoHydRology/src/std2.f |only
EcoHydRology-0.3.8/EcoHydRology/src/std3.f |only
EcoHydRology-0.3.8/EcoHydRology/src/stdaa.f |only
EcoHydRology-0.3.8/EcoHydRology/src/storeinitial.f |only
EcoHydRology-0.3.8/EcoHydRology/src/structure.f |only
EcoHydRology-0.3.8/EcoHydRology/src/subaa.f |only
EcoHydRology-0.3.8/EcoHydRology/src/subbasin.f |only
EcoHydRology-0.3.8/EcoHydRology/src/subday.f |only
EcoHydRology-0.3.8/EcoHydRology/src/submon.f |only
EcoHydRology-0.3.8/EcoHydRology/src/substor.f |only
EcoHydRology-0.3.8/EcoHydRology/src/subwq.f |only
EcoHydRology-0.3.8/EcoHydRology/src/subyr.f |only
EcoHydRology-0.3.8/EcoHydRology/src/sumv.f |only
EcoHydRology-0.3.8/EcoHydRology/src/sunglasr.f |only
EcoHydRology-0.3.8/EcoHydRology/src/sunglass.f |only
EcoHydRology-0.3.8/EcoHydRology/src/sunglasu.f |only
EcoHydRology-0.3.8/EcoHydRology/src/surface.f |only
EcoHydRology-0.3.8/EcoHydRology/src/surfst_h2o.f |only
EcoHydRology-0.3.8/EcoHydRology/src/surfstor.f |only
EcoHydRology-0.3.8/EcoHydRology/src/surq_daycn.f |only
EcoHydRology-0.3.8/EcoHydRology/src/surq_greenampt.f |only
EcoHydRology-0.3.8/EcoHydRology/src/surq_waterbalance.f |only
EcoHydRology-0.3.8/EcoHydRology/src/swbl.f |only
EcoHydRology-0.3.8/EcoHydRology/src/sweep.f |only
EcoHydRology-0.3.8/EcoHydRology/src/swu.f |only
EcoHydRology-0.3.8/EcoHydRology/src/tair.f |only
EcoHydRology-0.3.8/EcoHydRology/src/telobjre.f |only
EcoHydRology-0.3.8/EcoHydRology/src/telobs.f |only
EcoHydRology-0.3.8/EcoHydRology/src/telpar.f |only
EcoHydRology-0.3.8/EcoHydRology/src/tgen.f |only
EcoHydRology-0.3.8/EcoHydRology/src/theta.f |only
EcoHydRology-0.3.8/EcoHydRology/src/tillmix.f |only
EcoHydRology-0.3.8/EcoHydRology/src/tmeas.f |only
EcoHydRology-0.3.8/EcoHydRology/src/tran.f |only
EcoHydRology-0.3.8/EcoHydRology/src/transfer.f |only
EcoHydRology-0.3.8/EcoHydRology/src/tstr.f |only
EcoHydRology-0.3.8/EcoHydRology/src/ttcoef.f |only
EcoHydRology-0.3.8/EcoHydRology/src/urban.f |only
EcoHydRology-0.3.8/EcoHydRology/src/varinit.f |only
EcoHydRology-0.3.8/EcoHydRology/src/vbl.f |only
EcoHydRology-0.3.8/EcoHydRology/src/virtual.f |only
EcoHydRology-0.3.8/EcoHydRology/src/volq.f |only
EcoHydRology-0.3.8/EcoHydRology/src/vrval.f |only
EcoHydRology-0.3.8/EcoHydRology/src/washp.f |only
EcoHydRology-0.3.8/EcoHydRology/src/watbal.f |only
EcoHydRology-0.3.8/EcoHydRology/src/watqual.f |only
EcoHydRology-0.3.8/EcoHydRology/src/watqual2.f |only
EcoHydRology-0.3.8/EcoHydRology/src/wattable.f |only
EcoHydRology-0.3.8/EcoHydRology/src/watuse.f |only
EcoHydRology-0.3.8/EcoHydRology/src/weatgn.f |only
EcoHydRology-0.3.8/EcoHydRology/src/wetlan.f |only
EcoHydRology-0.3.8/EcoHydRology/src/wmeas.f |only
EcoHydRology-0.3.8/EcoHydRology/src/wndgen.f |only
EcoHydRology-0.3.8/EcoHydRology/src/writea.f |only
EcoHydRology-0.3.8/EcoHydRology/src/writeaa.f |only
EcoHydRology-0.3.8/EcoHydRology/src/writed.f |only
EcoHydRology-0.3.8/EcoHydRology/src/writem.f |only
EcoHydRology-0.3.8/EcoHydRology/src/writeswatfile.f |only
EcoHydRology-0.3.8/EcoHydRology/src/writeswatmain.f |only
EcoHydRology-0.3.8/EcoHydRology/src/xisquare.f |only
EcoHydRology-0.3.8/EcoHydRology/src/xiunc.f |only
EcoHydRology-0.3.8/EcoHydRology/src/xmon.f |only
EcoHydRology-0.3.8/EcoHydRology/src/ysed.f |only
EcoHydRology-0.3.8/EcoHydRology/src/zero0.f |only
EcoHydRology-0.3.8/EcoHydRology/src/zero1.f |only
EcoHydRology-0.3.8/EcoHydRology/src/zero2a.f |only
EcoHydRology-0.3.8/EcoHydRology/src/zero2b.f |only
EcoHydRology-0.3.8/EcoHydRology/src/zeroini.f |only
EcoHydRology-0.4.1/EcoHydRology/DESCRIPTION | 9 -
EcoHydRology-0.4.1/EcoHydRology/MD5 |only
EcoHydRology-0.4.1/EcoHydRology/NAMESPACE |only
EcoHydRology-0.4.1/EcoHydRology/R/BaseflowSeparation.R |only
EcoHydRology-0.4.1/EcoHydRology/R/EnvirEnergy.R | 6
EcoHydRology-0.4.1/EcoHydRology/R/EstCloudiness.R | 16 --
EcoHydRology-0.4.1/EcoHydRology/R/PET_fromTemp.R |only
EcoHydRology-0.4.1/EcoHydRology/R/SatVapPresSlope.R |only
EcoHydRology-0.4.1/EcoHydRology/R/SnowMelt.R |only
EcoHydRology-0.4.1/EcoHydRology/R/Solar.R | 2
EcoHydRology-0.4.1/EcoHydRology/R/hydrograph.R |only
EcoHydRology-0.4.1/EcoHydRology/R/runSWAT2005.R | 10 +
EcoHydRology-0.4.1/EcoHydRology/R/transmissivity.R | 33 +---
EcoHydRology-0.4.1/EcoHydRology/data/OwascoInlet.rda |only
EcoHydRology-0.4.1/EcoHydRology/man/AtmosphericEmissivity.Rd | 11 -
EcoHydRology-0.4.1/EcoHydRology/man/BaseflowSeparation.Rd |only
EcoHydRology-0.4.1/EcoHydRology/man/EcoHydRology-package.Rd | 11 -
EcoHydRology-0.4.1/EcoHydRology/man/EnvirEnergy.Rd | 33 +---
EcoHydRology-0.4.1/EcoHydRology/man/EstCloudiness.Rd | 57 --------
EcoHydRology-0.4.1/EcoHydRology/man/EvapHeat.Rd | 25 ---
EcoHydRology-0.4.1/EcoHydRology/man/GSOD_history.Rd | 4
EcoHydRology-0.4.1/EcoHydRology/man/GroundHeat.Rd | 22 ---
EcoHydRology-0.4.1/EcoHydRology/man/Longwave.Rd | 26 ---
EcoHydRology-0.4.1/EcoHydRology/man/NetRad.Rd | 25 ---
EcoHydRology-0.4.1/EcoHydRology/man/OwascoInlet.Rd |only
EcoHydRology-0.4.1/EcoHydRology/man/PET_fromTemp.Rd |only
EcoHydRology-0.4.1/EcoHydRology/man/PotentialSolar.Rd | 26 ---
EcoHydRology-0.4.1/EcoHydRology/man/RainHeat.Rd | 29 ----
EcoHydRology-0.4.1/EcoHydRology/man/SatVapPresSlope.Rd |only
EcoHydRology-0.4.1/EcoHydRology/man/SatVaporDensity.Rd | 26 ---
EcoHydRology-0.4.1/EcoHydRology/man/SensibleHeat.Rd | 26 ---
EcoHydRology-0.4.1/EcoHydRology/man/SnowMelt.Rd |only
EcoHydRology-0.4.1/EcoHydRology/man/SoilStorage.Rd | 23 ---
EcoHydRology-0.4.1/EcoHydRology/man/Solar.Rd | 46 ------
EcoHydRology-0.4.1/EcoHydRology/man/alter_files.Rd | 26 ---
EcoHydRology-0.4.1/EcoHydRology/man/build_gsod_forcing_data.Rd | 17 --
EcoHydRology-0.4.1/EcoHydRology/man/build_swat_basic.Rd | 28 ----
EcoHydRology-0.4.1/EcoHydRology/man/change_params.Rd | 9 -
EcoHydRology-0.4.1/EcoHydRology/man/declination.Rd | 26 ---
EcoHydRology-0.4.1/EcoHydRology/man/get_gsod_stn.Rd | 14 --
EcoHydRology-0.4.1/EcoHydRology/man/hydrograph.Rd |only
EcoHydRology-0.4.1/EcoHydRology/man/readSWAT.Rd | 16 --
EcoHydRology-0.4.1/EcoHydRology/man/runSWAT2005.Rd | 16 --
EcoHydRology-0.4.1/EcoHydRology/man/setup_swatcal.Rd | 24 ---
EcoHydRology-0.4.1/EcoHydRology/man/slopefactor.Rd | 26 ---
EcoHydRology-0.4.1/EcoHydRology/man/solarangle.Rd | 29 ----
EcoHydRology-0.4.1/EcoHydRology/man/solaraspect.Rd | 29 ----
EcoHydRology-0.4.1/EcoHydRology/man/swat_general.Rd | 10 -
EcoHydRology-0.4.1/EcoHydRology/man/swat_objective_function.Rd | 29 ----
EcoHydRology-0.4.1/EcoHydRology/man/transmissivity.Rd | 67 +---------
EcoHydRology-0.4.1/EcoHydRology/src/Makefile |only
EcoHydRology-0.4.1/EcoHydRology/src/Makefile.win |only
EcoHydRology-0.4.1/EcoHydRology/src/SWAT2005 |only
EcoHydRology-0.4.1/EcoHydRology/src/SWAT2009 |only
EcoHydRology-0.4.1/EcoHydRology/src/install.libs.R |only
364 files changed, 52 insertions(+), 780 deletions(-)
Title: Tools: moving window statistics, GIF, Base64, ROC AUC, etc.
Diff between caTools versions 1.12 dated 2011-05-18 and 1.13 dated 2012-05-23
Description: Contains several basic utility functions including: moving
(rolling, running) window statistic functions, read/write for
GIF and ENVI binary files, fast calculation of AUC, LogitBoost
classifier, base64 encoder/decoder, round-off error free sum
and cumsum, etc.
Author: Jarek Tuszynski
Maintainer: Timothy P. Jurka
CHANGES | 11 ++++-------
DESCRIPTION | 12 +++++++-----
MD5 |only
NAMESPACE |only
man/GIF.Rd | 2 --
man/caTools-package.Rd | 9 +++------
man/colAUC.Rd | 2 --
man/trapz.Rd | 2 --
8 files changed, 14 insertions(+), 24 deletions(-)