Title: The Fisher-EM algorithm
Diff between FisherEM versions 1.1.2 dated 2011-05-29 and 1.2 dated 2012-07-12
Description: The FisherEM package provides an efficient algorithm for
the unsupervised classification of high-dimensional data. This
FisherEM algorithm models and clusters the data in a
discriminative and low-dimensional latent subspace. It also
provides a low-dimensional representation of the clustered
data.
Author: Charles Bouveyron and Camille Brunet
Maintainer: Camille Brunet
FisherEM-1.1.2/FisherEM/R/FisherEM.r |only
FisherEM-1.1.2/FisherEM/R/eval.r |only
FisherEM-1.1.2/FisherEM/R/plot.r |only
FisherEM-1.1.2/FisherEM/man/eval.fem.Rd |only
FisherEM-1.2/FisherEM/DESCRIPTION | 29 +--
FisherEM-1.2/FisherEM/MD5 |only
FisherEM-1.2/FisherEM/NAMESPACE | 7
FisherEM-1.2/FisherEM/R/FisherEM-internal.R |only
FisherEM-1.2/FisherEM/R/criteria.R |only
FisherEM-1.2/FisherEM/R/estep.R |only
FisherEM-1.2/FisherEM/R/evalEM.R |only
FisherEM-1.2/FisherEM/R/fem.R |only
FisherEM-1.2/FisherEM/R/fem.loglik.R |only
FisherEM-1.2/FisherEM/R/fem_main.R |only
FisherEM-1.2/FisherEM/R/fem_sparse.R |only
FisherEM-1.2/FisherEM/R/fstep.GramSc.R |only
FisherEM-1.2/FisherEM/R/fstep.fisher.R |only
FisherEM-1.2/FisherEM/R/fstep.qiao.R |only
FisherEM-1.2/FisherEM/R/fstep.sparse.R |only
FisherEM-1.2/FisherEM/R/mstep.R |only
FisherEM-1.2/FisherEM/R/plot.fem.R |only
FisherEM-1.2/FisherEM/demo/00Index | 2
FisherEM-1.2/FisherEM/demo/FisherEM.r | 140 ++++++----------
FisherEM-1.2/FisherEM/inst |only
FisherEM-1.2/FisherEM/man/FisherEM-package.Rd | 82 ++++-----
FisherEM-1.2/FisherEM/man/evalEM.Rd |only
FisherEM-1.2/FisherEM/man/fem.Rd | 216 +++++++++++++-------------
FisherEM-1.2/FisherEM/man/plot.fem.Rd | 73 ++++----
28 files changed, 250 insertions(+), 299 deletions(-)
Title: Routines for fitting kinetic models with one or more state
variables to chemical degradation data
Diff between mkin versions 0.9-05 dated 2012-06-29 and 0.9-06 dated 2012-07-12
Description: Calculation routines based on the FOCUS Kinetics Report
(2006). Includes a function for conveniently defining
differential equation models, model solution based on
eigenvalues if possible or using numerical solvers and a choice
of the optimisation methods made available by the FME package
(default is a Levenberg-Marquardt variant). Please note that
no warranty is implied for correctness of results or fitness
for a particular purpose.
Author: Johannes Ranke, Katrin Lindenberger, René Lehmann
Maintainer: Johannes Ranke
DESCRIPTION | 10 +++++-----
MD5 | 16 ++++++++--------
R/mkinfit.R | 9 +++++----
R/mkinplot.R | 2 +-
R/mkinpredict.R | 5 +++--
TODO | 4 ++++
inst/doc/mkin.pdf |binary
man/mkinfit.Rd | 10 +++++++---
man/mkinpredict.Rd | 29 +++++++++++++++++------------
9 files changed, 50 insertions(+), 35 deletions(-)
More information about hierarchicalDS at CRAN
Permanent link
Title: Regularization paths for regression models with grouped
covariates
Diff between grpreg versions 1.2-1 dated 2011-07-06 and 1.2-2 dated 2012-07-12
Description: Efficient algorithms for fitting the regularization path
for linear or logistic regression models penalized by the group
lasso, group bridge, or group MCP methods. The algorithm is
based on the idea of a locally approximated coordinate descent.
Author: Patrick Breheny
Maintainer: Patrick Breheny
DESCRIPTION | 8 ++++----
MD5 |only
NEWS | 3 +++
R/grpreg.R | 2 +-
man/grpreg.Rd | 2 +-
5 files changed, 9 insertions(+), 6 deletions(-)
Title: Simple Network of Workstations
Diff between snow versions 0.3-9 dated 2012-04-25 and 0.3-10 dated 2012-07-12
Description: Support for simple parallel computing in R.
Author: Luke Tierney, A. J. Rossini, Na Li, H. Sevcikova
Maintainer: Luke Tierney
DESCRIPTION | 6 +++---
MD5 | 4 ++--
inst/RMPISNOW | 17 +++++++++++++----
3 files changed, 18 insertions(+), 9 deletions(-)
Title: A tool for efficient calculation and optimization of the
expected gain from multi-stage
Diff between selectiongain versions 1.2.1.0 dated 2011-12-10 and 2.0.1 dated 2012-07-12
Description: Multi-stage selection is practised in numerous fields of
the life and social sciences and particularly in breeding. A
special characteristic of multi-stage selection is that
candidates are evaluated in successive stages with increasing
intensity and efforts, and only a fraction of the superior
candidates is selected and promoted to the next stage. For the
optimum design of such selection programs, the selection gain
plays a crucial role. It can be calculated by integration of a
truncated multivariate normal (MVN) distribution. While
mathematical formulas for calculating the selection gain and
the variance among selected candidates, were developed long
time ago, solutions for numerical calculation were not
available. This package can also be used for optimizing
multi-stage selection programs for a given total budget and
different costs of evaluating the candidates in each stage.
Author: Xuefei Mi, Friedrich Utz, Albrecht E. Melchinger (Project
contact person: Melchinger at uni-hohenheim.de )
Maintainer: Xuefei Mi
selectiongain-1.2.1.0/selectiongain/R/calculatefromalpha.R |only
selectiongain-1.2.1.0/selectiongain/R/multistageselection.R |only
selectiongain-1.2.1.0/selectiongain/man/calculatefromalpha.Rd |only
selectiongain-1.2.1.0/selectiongain/man/multistageselection.Rd |only
selectiongain-2.0.1/selectiongain/DESCRIPTION | 34 +
selectiongain-2.0.1/selectiongain/MD5 | 29 -
selectiongain-2.0.1/selectiongain/NAMESPACE |only
selectiongain-2.0.1/selectiongain/R/multistagecor.R |only
selectiongain-2.0.1/selectiongain/R/multistagegain.R | 19
selectiongain-2.0.1/selectiongain/R/multistagegain.each.R | 15
selectiongain-2.0.1/selectiongain/R/multistageoptimal.grid.R |only
selectiongain-2.0.1/selectiongain/R/multistageoptimal.nlm.R |only
selectiongain-2.0.1/selectiongain/R/multistageoptimal.pb.R |only
selectiongain-2.0.1/selectiongain/R/multistagetp.R |only
selectiongain-2.0.1/selectiongain/R/multistagevariance.R | 27 +
selectiongain-2.0.1/selectiongain/man/multistagecor.Rd |only
selectiongain-2.0.1/selectiongain/man/multistagegain.Rd | 117 +----
selectiongain-2.0.1/selectiongain/man/multistagegain.each.Rd | 166 +------
selectiongain-2.0.1/selectiongain/man/multistageoptimal.grid.Rd |only
selectiongain-2.0.1/selectiongain/man/multistageoptimal.nlm.Rd |only
selectiongain-2.0.1/selectiongain/man/multistageoptimal.pb.Rd |only
selectiongain-2.0.1/selectiongain/man/multistagetp.Rd |only
selectiongain-2.0.1/selectiongain/man/multistagevariance.Rd | 212 +---------
23 files changed, 179 insertions(+), 440 deletions(-)
Title: Segmented relationships in regression models with
breakpoints/changepoints estimation
Diff between segmented versions 0.2-9.1 dated 2012-05-10 and 0.2-9.2 dated 2012-07-12
Description: Given a (generalized) linear model, segmented `updates'
the model by adding one or more segmented relationships.
Several variables with multiple breakpoints are allowed.
Author: Vito M.R. Muggeo
Maintainer: Vito M.R. Muggeo
DESCRIPTION | 10 ++++++----
MD5 | 32 ++++++++++++++++----------------
NEWS | 21 +++++++++++++++------
R/plot.segmented.R | 10 ++++++----
R/seg.control.R | 4 ++--
R/seg.glm.fit.boot.r | 6 ++----
R/seg.glm.fit.r | 6 ++----
R/seg.lm.fit.r | 16 ++++++++++++++--
R/segmented.glm.R | 7 ++++++-
R/segmented.lm.R | 18 ++++++++++++++----
data/down.rda |binary
data/plant.rda |binary
data/stagnant.rda |binary
man/plot.segmented.Rd | 8 ++++----
man/seg.control.Rd | 28 ++++++++++++++++------------
man/seg.lm.fit.Rd | 11 ++++++-----
man/segmented-package.Rd | 4 ++--
17 files changed, 111 insertions(+), 70 deletions(-)
Title: Automating Mplus Model Estimation and Interpretation
Diff between MplusAutomation versions 0.5-1 dated 2012-04-03 and 0.5-2 dated 2012-07-12
More information about MplusAutomation at CRAN
Description: The MplusAutomation package leverages the flexibility of
the R language to automate latent variable model estimation and
interpretation using Mplus, a powerful latent variable modeling
program developed by Muthen and Muthen (www.statmodel.com).
Specifically, MplusAutomation provides routines for creating
related groups of models, running batches of models, and
extracting and tabulating model parameters and fit statistics.
Author: Michael Hallquist
Maintainer: Michael Hallquist
DESCRIPTION | 11 +--
MD5 | 28 ++++----
NAMESPACE | 2
NEWS | 14 ++++
R/compareModels.R | 5 +
R/createModels.R | 1
R/extractParameters.R | 4 -
R/extractSaveData.R | 67 +++++++++++++++++++
R/parseOutput.R | 138 +++++++++++++++++++++++++++++++++++++++-
R/utilityFunctions.R | 6 +
inst/doc/Vignette.Rnw | 139 ++++++++++++++++++++++++++++++-----------
inst/doc/Vignette.pdf |binary
man/MplusAutomation-package.Rd | 4 -
man/getSavedata_Bparams.Rd | 12 ++-
man/readModels.Rd | 8 +-
15 files changed, 367 insertions(+), 72 deletions(-)
Permanent link
Title: Tools for detecting influential data in mixed effects models
Diff between influence.ME versions 0.8.1 dated 2011-11-20 and 0.9 dated 2012-07-12
Description: influence.ME provides a collection of tools for
calculating measures of influential data for generalized mixed
effects models. It analyses models that were estimated using
lme4. The basic rationale behind identifying influential data
is that when iteratively single units are omitted from the
data, models based on these data should not produce
substantially different estimates. To standardize the
assessment of how influential a (single group of)
observation(s) is, several measures of influence are common
practice, such as DFBETAS and Cooks' Distance. In addition, we
provide a measure of percentage change of the fixed point
estimates and a simple test to detect changing levels of
significance.
Author: Rense Nieuwenhuis, Ben Pelzer, Manfred te Grotenhuis
Maintainer: Rense Nieuwenhuis
influence.ME-0.8.1/influence.ME/R/ME.cook.R |only
influence.ME-0.8.1/influence.ME/R/ME.dfbetas.R |only
influence.ME-0.8.1/influence.ME/R/ME.pchange.R |only
influence.ME-0.8.1/influence.ME/R/dp.ME.cook.R |only
influence.ME-0.8.1/influence.ME/R/dp.ME.dfbetas.R |only
influence.ME-0.8.1/influence.ME/R/dp.ME.pchange.R |only
influence.ME-0.8.1/influence.ME/R/estex.R |only
influence.ME-0.8.1/influence.ME/man/ME.cook.Rd |only
influence.ME-0.8.1/influence.ME/man/ME.dfbetas.Rd |only
influence.ME-0.8.1/influence.ME/man/ME.pchange.Rd |only
influence.ME-0.8.1/influence.ME/man/dp.ME.cook.Rd |only
influence.ME-0.8.1/influence.ME/man/dp.ME.dfbetas.Rd |only
influence.ME-0.8.1/influence.ME/man/dp.ME.pchange.Rd |only
influence.ME-0.8.1/influence.ME/man/estex.Rd |only
influence.ME-0.9/influence.ME/DESCRIPTION | 24 ++++++--
influence.ME-0.9/influence.ME/MD5 | 42 ++++++--------
influence.ME-0.9/influence.ME/NAMESPACE | 1
influence.ME-0.9/influence.ME/R/cooks.distance.extex.r |only
influence.ME-0.9/influence.ME/R/dfbetas.estex.r |only
influence.ME-0.9/influence.ME/R/exclude.influence.R | 38 ++++++++++--
influence.ME-0.9/influence.ME/R/influence.mer.R |only
influence.ME-0.9/influence.ME/R/pchange.R |only
influence.ME-0.9/influence.ME/R/plot.estex.R |only
influence.ME-0.9/influence.ME/R/se.fixef.R | 11 +--
influence.ME-0.9/influence.ME/R/sigtest.R |only
influence.ME-0.9/influence.ME/man/cooks.distance.estex.Rd |only
influence.ME-0.9/influence.ME/man/dfbetas.estex.Rd |only
influence.ME-0.9/influence.ME/man/exclude.influence.Rd | 19 +++---
influence.ME-0.9/influence.ME/man/grouping.levels.Rd | 2
influence.ME-0.9/influence.ME/man/influence.ME-package.Rd | 34 ++++++-----
influence.ME-0.9/influence.ME/man/influence.mer.Rd |only
influence.ME-0.9/influence.ME/man/pchange.Rd |only
influence.ME-0.9/influence.ME/man/plot.estex.Rd |only
influence.ME-0.9/influence.ME/man/school23.Rd | 4 -
influence.ME-0.9/influence.ME/man/sigtest.Rd |only
35 files changed, 110 insertions(+), 65 deletions(-)
Title: Mixtures of von Mises-Fisher Distributions
Diff between movMF versions 0.0-1 dated 2012-06-05 and 0.0-2 dated 2012-07-12
Description: Fit and simulate mixtures of von Mises-Fisher
distributions.
Author: Kurt Hornik and Bettina Grün
Maintainer: Kurt Hornik
DESCRIPTION | 6 +++---
MD5 | 6 ++++--
NEWS |only
R/movMF.R | 29 ++++++++++++++++-------------
src/mycf.c |only
5 files changed, 23 insertions(+), 18 deletions(-)
Title: A graphical user interface for the tabplot package
Diff between tabplotGTK versions 0.5-2 dated 2012-05-02 and 0.6 dated 2012-07-12
Description: This package offers a GTK graphical user interface for the
creation of tableplots with the tabplot package.
Author: Martijn Tennekes and Edwin de Jonge
Maintainer: Martijn Tennekes
DESCRIPTION | 10 +++++-----
MD5 | 16 ++++++++--------
NEWS | 3 +++
R/isTabplotUsable.R | 6 +++---
R/pkg.R | 8 ++++----
R/tableGUI.R | 1 +
R/tableGUI_functions.R | 13 ++++++-------
man/tableGUI.Rd | 4 +++-
man/tabplotGTK-package.Rd | 19 ++++++++++++++-----
9 files changed, 47 insertions(+), 33 deletions(-)
Title: Tableplot, a visualization of large datasets
Diff between tabplot versions 0.11-2 dated 2012-05-02 and 0.12 dated 2012-07-12
Description: A tableplot is a visualisation of a (large) dataset with a
dozen of variables, both numeric and categorical. Each column
represents a variable and each row bin is an aggregate of a
certain number of records. Numeric variables are visualized as
bar charts, and categorical variables as stacked bar charts.
Missing values are taken into account. Also supports large ffdf
datasets from the ff package.
Author: Martijn Tennekes and Edwin de Jonge
Maintainer: Martijn Tennekes
tabplot-0.11-2/tabplot/R/tableplot_checktCols.R |only
tabplot-0.11-2/tabplot/vignettes |only
tabplot-0.12/tabplot/DESCRIPTION | 14
tabplot-0.12/tabplot/MD5 | 44 +-
tabplot-0.12/tabplot/NEWS | 9
tabplot-0.12/tabplot/R/getFreqTable_DT.R | 29 +
tabplot-0.12/tabplot/R/pkg.R | 8
tabplot-0.12/tabplot/R/plot_tabplot.r | 55 ++-
tabplot-0.12/tabplot/R/preprocess.data.table.R | 135 ++++++--
tabplot-0.12/tabplot/R/preprocess.ffdf.R | 6
tabplot-0.12/tabplot/R/sysdata.rda |binary
tabplot-0.12/tabplot/R/tableChange.R | 10
tabplot-0.12/tabplot/R/tablePalettes.R | 23 -
tabplot-0.12/tabplot/R/tableplot.R | 184 ++++++++---
tabplot-0.12/tabplot/R/tableplot_checkCols.R |only
tabplot-0.12/tabplot/inst/doc/tabplot-vignette.Rnw | 328 ---------------------
tabplot-0.12/tabplot/inst/doc/tabplot-vignette.pdf |binary
tabplot-0.12/tabplot/man/plot.tabplot.Rd | 12
tabplot-0.12/tabplot/man/tableChange.Rd | 7
tabplot-0.12/tabplot/man/tablePalettes.Rd | 29 +
tabplot-0.12/tabplot/man/tableplot.Rd | 88 +++--
tabplot-0.12/tabplot/man/tabplot-package.Rd | 13
22 files changed, 457 insertions(+), 537 deletions(-)
Title: GUTS: Fast Calculation of the Likelihood of a Stochastic
Survival Model
Diff between GUTS versions 0.1.45 dated 2011-06-22 and 0.2.8 dated 2012-07-12
Description: Given exposure and survival time series as well as
parameter values, GUTS allows for the calculation of the
survival probabilities as well as the logarithm of the
corresponding likelihood.
Author: Carlo Albert
Maintainer: Sören Vogel
GUTS-0.1.45/GUTS/man/GUTS-class.Rd |only
GUTS-0.1.45/GUTS/src/GUTS_doSample.cpp |only
GUTS-0.1.45/GUTS/src/GUTS_rcpp_module.cpp |only
GUTS-0.2.8/GUTS/DESCRIPTION | 27
GUTS-0.2.8/GUTS/MD5 |only
GUTS-0.2.8/GUTS/Makefile.am |only
GUTS-0.2.8/GUTS/NAMESPACE | 2
GUTS-0.2.8/GUTS/R/GUTS.R | 153 +++-
GUTS-0.2.8/GUTS/R/zzz.R | 11
GUTS-0.2.8/GUTS/aclocal.m4 |only
GUTS-0.2.8/GUTS/configure |only
GUTS-0.2.8/GUTS/configure.ac |only
GUTS-0.2.8/GUTS/data |only
GUTS-0.2.8/GUTS/inst |only
GUTS-0.2.8/GUTS/m4 |only
GUTS-0.2.8/GUTS/man/Rcpp_GUTS-class.Rd |only
GUTS-0.2.8/GUTS/man/diazinon.Rd |only
GUTS-0.2.8/GUTS/src/GUTS.cpp | 570 ++++++++---------
GUTS-0.2.8/GUTS/src/GUTS.h | 330 +++++----
GUTS-0.2.8/GUTS/src/GUTS_Rcpp.cpp |only
GUTS-0.2.8/GUTS/src/GUTS_calcLoglikelihood.cpp | 225 ++----
GUTS-0.2.8/GUTS/src/GUTS_calcSample.cpp |only
GUTS-0.2.8/GUTS/src/GUTS_calcSurvivalProbabilities.cpp |only
GUTS-0.2.8/GUTS/src/Makevars | 5
GUTS-0.2.8/GUTS/src/Makevars.in |only
GUTS-0.2.8/GUTS/src/Makevars.win | 1
26 files changed, 688 insertions(+), 636 deletions(-)
Title: eVenn: A powerful tool to compare lists and draw Venn diagrams.
Diff between eVenn versions 2.1.5 dated 2012-03-13 and 2.1.6 dated 2012-07-12
Description: Compute a matrix comparison of lists (from 2 to infinite)
and plot the results in a Venn diagram if (N<=4) with
regulation details. It allows to produce a complete annotated
file, merging the annotations of the compared lists. It is also
possible to compute an overlaps table to show the overlaps
proportions of all the couples of lists and draw proportional
Venn diagrams.
Author: Nicolas Cagnard
Maintainer: Nicolas Cagnard
eVenn-2.1.5/eVenn/R/evenn.R |only
eVenn-2.1.6/eVenn/DESCRIPTION | 8 ++++----
eVenn-2.1.6/eVenn/MD5 | 10 +++++-----
eVenn-2.1.6/eVenn/R/evenn.r |only
eVenn-2.1.6/eVenn/R/man.evenn.R | 13 ++++++++-----
eVenn-2.1.6/eVenn/man/eVenn-package.Rd | 5 +++--
eVenn-2.1.6/eVenn/man/evenn.Rd | 11 ++++++++++-
7 files changed, 30 insertions(+), 17 deletions(-)
Title: Functions for actuarial scientists
Diff between ActuDistns versions 1.0 dated 2012-06-16 and 2.0 dated 2012-07-12
Description: Computes the probability density function, hazard rate
function, integrated hazard rate function and the quantile
function for 44 commonly used survival models
Author: Saralees Nadarajah
Maintainer: Saralees Nadarajah
DESCRIPTION | 6
MD5 | 352 +++++++++++++++++++--------------------
R/richards.R | 423 +++++++++++++++++++++---------------------------
man/daddweibull.Rd | 15 -
man/dbeard.Rd | 16 -
man/dbeta.Rd | 11 -
man/dburrx.Rd | 11 -
man/dchen.Rd | 12 -
man/dee.Rd | 8
man/del.Rd | 8
man/dew.Rd | 8
man/dexpext.Rd | 9 -
man/dexponential.Rd | 10 -
man/dfrechet.Rd | 8
man/dfw.Rd | 9 -
man/dgamma.Rd | 12 -
man/dgenF.Rd | 10 -
man/dgengamma.Rd | 18 --
man/dgompertz.Rd | 10 -
man/dgpw.Rd | 12 -
man/dgumbel.Rd | 7
man/dhjorth.Rd | 9 -
man/dige.Rd | 8
man/dinvgauss.Rd | 14 -
man/djshape.Rd | 9 -
man/dkum.Rd | 8
man/dlai.Rd | 9 -
man/dle.Rd | 8
man/dlgamma.Rd | 8
man/dlinear.Rd | 8
man/dll.Rd | 9 -
man/dlogistic.Rd | 9 -
man/dloglogistic.Rd | 15 -
man/dlognormal.Rd | 9 -
man/dlr.Rd | 8
man/dmakeham.Rd | 13 -
man/dmakehambeard.Rd | 22 --
man/dmakehamperks.Rd | 20 --
man/dmoe.Rd | 8
man/dmow.Rd | 11 -
man/dnormal.Rd | 9 -
man/dpareto.Rd | 9 -
man/dperks.Rd | 10 -
man/dschabe.Rd | 9 -
man/duniform.Rd | 7
man/dweibull.Rd | 11 -
man/dxie.Rd | 9 -
man/haddweibull.Rd | 12 -
man/hbeard.Rd | 12 -
man/hbeta.Rd | 8
man/hburrx.Rd | 9 -
man/hchen.Rd | 8
man/hee.Rd | 9 -
man/hel.Rd | 9 -
man/hew.Rd | 9 -
man/hexpext.Rd | 8
man/hexponential.Rd | 9 -
man/hfrechet.Rd | 8
man/hfw.Rd | 8
man/hgamma.Rd | 13 -
man/hgenF.Rd | 12 -
man/hgengamma.Rd | 20 --
man/hgompertz.Rd | 10 -
man/hgpw.Rd | 12 -
man/hgumbel.Rd | 8
man/hhjorth.Rd | 8
man/hige.Rd | 9 -
man/hinvgauss.Rd | 15 -
man/hjshape.Rd | 9 -
man/hkum.Rd | 8
man/hlai.Rd | 8
man/hle.Rd | 9 -
man/hlgamma.Rd | 9 -
man/hlinear.Rd | 8
man/hll.Rd | 8
man/hlogistic.Rd | 9 -
man/hloglogistic.Rd | 15 -
man/hlognormal.Rd | 10 -
man/hlr.Rd | 9 -
man/hmakeham.Rd | 12 -
man/hmakehambeard.Rd | 14 -
man/hmakehamperks.Rd | 12 -
man/hmoe.Rd | 8
man/hmow.Rd | 11 -
man/hnormal.Rd | 10 -
man/hpareto.Rd | 9 -
man/hperks.Rd | 10 -
man/hschabe.Rd | 8
man/huniform.Rd | 8
man/hweibull.Rd | 11 -
man/hxie.Rd | 8
man/iaddweibull.Rd | 9 -
man/ibeard.Rd | 13 -
man/ibeta.Rd | 9 -
man/iburrx.Rd | 9 -
man/ichen.Rd | 8
man/iee.Rd | 9 -
man/iel.Rd | 10 -
man/iew.Rd | 10 -
man/iexpext.Rd | 9 -
man/iexponential.Rd | 10 -
man/ifrechet.Rd | 8
man/ifw.Rd | 9 -
man/igamma.Rd | 13 -
man/igenF.Rd | 12 -
man/igengamma.Rd | 20 --
man/igompertz.Rd | 11 -
man/igpw.Rd | 9 -
man/igumbel.Rd | 9 -
man/ihjorth.Rd | 10 -
man/iige.Rd | 10 -
man/iinvgauss.Rd | 15 -
man/ijshape.Rd | 11 -
man/ikum.Rd | 9 -
man/ilai.Rd | 13 -
man/ile.Rd | 10 -
man/ilgamma.Rd | 10 -
man/ilinear.Rd | 9 -
man/ill.Rd | 8
man/ilogistic.Rd | 10 -
man/iloglogistic.Rd | 16 -
man/ilognormal.Rd | 11 -
man/ilr.Rd | 10 -
man/imakeham.Rd | 13 -
man/imakehambeard.Rd | 16 -
man/imakehamperks.Rd | 14 -
man/imoe.Rd | 9 -
man/imow.Rd | 10 -
man/inormal.Rd | 10 -
man/ipareto.Rd | 10 -
man/iperks.Rd | 11 -
man/ischabe.Rd | 9 -
man/iuniform.Rd | 8
man/iweibull.Rd | 13 -
man/ixie.Rd | 9 -
man/qaddweibull.Rd | 17 -
man/qbeard.Rd | 14 -
man/qbeta.Rd | 10 -
man/qburrx.Rd | 10 -
man/qchen.Rd | 9 -
man/qee.Rd | 10 -
man/qel.Rd | 10 -
man/qew.Rd | 11 -
man/qexpext.Rd | 9 -
man/qexponential.Rd | 10 -
man/qfrechet.Rd | 10 -
man/qfw.Rd | 10 -
man/qgamma.Rd | 14 -
man/qgenF.Rd | 13 -
man/qgengamma.Rd | 20 --
man/qgompertz.Rd | 11 -
man/qgpw.Rd | 9 -
man/qgumbel.Rd | 9 -
man/qhjorth.Rd | 21 --
man/qige.Rd | 10 -
man/qinversegaussian.Rd | 16 -
man/qjshape.Rd | 10 -
man/qkum.Rd | 9 -
man/qlai.Rd | 24 --
man/qle.Rd | 10 -
man/qlgamma.Rd | 10 -
man/qlinear.Rd | 10 -
man/qll.Rd | 9 -
man/qlogistic.Rd | 11 -
man/qloglogis.Rd | 13 -
man/qlognormal.Rd | 14 -
man/qlr.Rd | 10 -
man/qmoe.Rd | 9 -
man/qmow.Rd | 10 -
man/qnormal.Rd | 11 -
man/qpareto.Rd | 10 -
man/qperks.Rd | 11 -
man/qschabe.Rd | 10 -
man/quniform.Rd | 8
man/qweibull.Rd | 11 -
man/qxie.Rd | 9 -
man/richards-package.Rd | 4
177 files changed, 490 insertions(+), 2140 deletions(-)
Title: Interface between R and GGobi
Diff between rggobi versions 2.1.17 dated 2011-04-06 and 2.1.19 dated 2012-07-12
Description: The rggobi package provides a command-line interface to
GGobi, an interactive and dynamic graphics package. Rggobi
complements GGobi's graphical user interface, providing a way
to fluidly transition between analysis and exploration, as well
as automating common tasks.
Author: Duncan Temple Lang
Maintainer: Hadley Wickham
.gitignore |only
DESCRIPTION | 10
MD5 |only
R/call.r | 5
R/display.r | 32
R/edges.r | 8
aclocal.m4 | 67 -
configure | 2387 ++++++++++++++++++++-----------------
man/GGobiData-class.rd |only
man/as-data-frame-GGobiData-i6.rd | 4
man/close-GGobi-kz.rd | 4
man/close-GGobiDisplay-ke.rd | 4
man/dataset-GGobiDisplay-gk.rd | 2
man/dataset-numeric-gd.rd | 2
man/dim-GGobiData-ok.rd | 2
man/dimnames---GGobiData-ds.rd | 2
man/dimnames-GGobiData-x0.rd | 2
man/display-GGobiData-vz.rd | 2
man/displays-GGobi-n2.rd | 2
man/edges---GGobi-m7.rd | 2
man/edges---GGobiData-qe.rd | 2
man/edges---GGobiDisplay-1y.rd | 2
man/excluded---GGobiData-3z.rd | 2
man/excluded-GGobiData-ic.rd | 2
man/get--GGobi-7p.rd | 2
man/get--GGobiData-9v.rd | 2
man/ggobi-GGobiDisplay-zh.rd | 4
man/ggobi-default-20.rd | 2
man/glyph-colour---GGobiData-u7.rd | 2
man/glyph-colour-GGobiData-p2.rd | 2
man/glyph-size---GGobiData-9w.rd | 2
man/glyph-size-GGobiData-3t.rd | 2
man/glyph-type---GGobiData-r1.rd | 2
man/glyph-type-GGobiData-og.rd | 2
man/ids---GGobiData-mw.rd | 2
man/ids-GGobiData-yu.rd | 2
man/length-GGobiDisplay-gt.rd | 2
man/names---GGobiData-p2.rd | 2
man/names-GGobi-pt.rd | 2
man/names-GGobiData-c0.rd | 4
man/ncol-GGobiData-p3.rd | 2
man/nrow-GGobiData-om.rd | 2
man/print-GGobi-yo.rd | 4
man/print-GGobiData-ja.rd | 4
man/print-GGobiDisplay-o0.rd | 4
man/rownames---GGobiData-rg.rd | 2
man/rownames-GGobiData-pv.rd | 2
man/selected-GGobiData-xv.rd | 2
man/set--GGobi-b7.rd | 2
man/set--GGobiData-56.rd | 2
man/shadowed---GGobiData-h7.rd | 2
man/shadowed-GGobiData-8b.rd | 2
man/summary-GGobi-c4.rd | 4
man/summary-GGobiData-mm.rd | 4
man/variables---GGobiDisplay-a6.rd | 2
man/variables-GGobiDisplay-si.rd | 2
src/Makevars | 4
src/Makevars.win | 6
src/display.c | 10
59 files changed, 1436 insertions(+), 1207 deletions(-)
Title: Generalized Dynamic Linear Modeler
Diff between dlmodeler versions 1.2-0 dated 2012-07-10 and 1.2-1 dated 2012-07-12
Description: dlmodeler is a set of user-friendly functions to simplify
the state-space modelling, fitting, analysis and forecasting of
Generalized Dynamic Linear Models (DLMs). It includes functions
to name and extract individual components of a DLM, build
classical seasonal time-series models (monthly, quarterly,
yearly, etc. with calendar adjustments) and provides a unified
interface compatible with other state-space packages including:
dlm, FKF and KFAS.
Author: Cyrille Szymanski
Maintainer: Cyrille Szymanski
ChangeLog | 3 +++
DESCRIPTION | 10 +++++-----
MD5 | 4 ++--
3 files changed, 10 insertions(+), 7 deletions(-)
Title: US Census 2010 Suite of R Packages
Diff between UScensus2010 versions 0.10 dated 2011-11-23 and 0.11 dated 2012-07-12
Description: US Census 2010 shape files and additional demographic data
from the SF1 100 percent files. This package contains a number
of helper functions for the UScensus2010blk,
UScensus2010blkgrp, UScensus2010tract, UScensus2010cdp
packages.
Author: Zack W. Almquist
Maintainer: Zack W. Almquist
DESCRIPTION | 21 +++++++++++----------
MD5 | 18 +++++++++---------
NAMESPACE | 4 +++-
R/demographics.R | 6 +++---
R/zzz.R | 13 +++++++++----
man/areaPoly.Rd | 2 +-
man/choropleth.Rd | 2 +-
man/county.Rd | 2 +-
man/install.cdp.Rd | 2 +-
man/install.county.Rd | 2 +-
10 files changed, 40 insertions(+), 32 deletions(-)
Title: US Census 2000 Suite of R Packages: Demographic Add
Diff between UScensus2000add versions 1.00 dated 2010-11-17 and 1.02 dated 2012-07-12
More information about UScensus2000add at CRAN
Description: US 2000 Census shape files and additional demographic data
from the SF1 100 percent files. This package contains a helper
functions for the UScensus2000addblk, UScensus2000addblkgrp,
UScensus2000addtract, UScensus2000add packages.
Author: Zack W. Almquist
Maintainer: Zack W. Almquist
DESCRIPTION | 7 +++----
MD5 |only
NAMESPACE |only
R/demographics.add.R | 4 ++--
R/zzz.R | 26 ++++++++++----------------
5 files changed, 15 insertions(+), 22 deletions(-)
Permanent link
Title: Two-table ExPosition
Diff between TExPosition versions 1.0 dated 2012-06-21 and 1.1 dated 2012-07-12
Description: TExPosition is an extension of ExPosition for two table
analyses, specifically, discriminant analyses.
Author: Derek Beaton, Jenny Rieck, Cherise R. Chin Fatt, Herve Abdi
Maintainer: Derek Beaton
DESCRIPTION | 8 ++++----
MD5 | 10 +++++-----
R/tepBADA.R | 1 +
R/tepDICA.R | 1 +
R/tepGraphs.R | 5 ++---
man/TExPosition-package.Rd | 4 ++--
6 files changed, 15 insertions(+), 14 deletions(-)
Title: Rcpp integration for Armadillo templated linear algebra library
Diff between RcppArmadillo versions 0.3.2.3 dated 2012-07-02 and 0.3.2.4 dated 2012-07-12
Description: R and Armadillo integration using Rcpp Armadillo is a
templated C++ linear algebra library (by Conrad Sanderson) that
aims towards a good balance between speed and ease of use.
Integer, floating point and complex numbers are supported, as
well as a subset of trigonometric and statistics functions.
Various matrix decompositions are provided through optional
integration with LAPACK and ATLAS libraries.
A delayed evaluation approach is employed (during compile time) to
combine several operations into one, and to reduce (or
eliminate) the need for temporaries. This is accomplished
through recursive templates and template meta-programming.
This library is useful if C++ has been decided as the language of
choice (due to speed and/or integration capabilities), rather
than another language.
The RcppArmadillo package includes the header files from the templated
Armadillo library (currently version 3.2.4). Thus users do not
need to install Armadillo itself in order to use RcppArmadillo.
This Armadillo integration provides a nice illustration of the
capabilities of the Rcpp package for seamless R and C++
integration.
Armadillo is licensed under the GNU LGPL version 3 or later, while
RcppArmadillo (the Rcpp bindings/bridge to Armadillo) is
licenses under the GNU GPL version 2 or later, as is the rest
of Rcpp.
Author: Romain Francois, Dirk Eddelbuettel and Doug Bates
Maintainer: Dirk Eddelbuettel
ChangeLog | 6
DESCRIPTION | 10 -
MD5 | 26 +-
inst/NEWS | 6
inst/doc/RcppArmadillo-intro.pdf |binary
inst/doc/RcppArmadillo-unitTests.pdf |binary
inst/doc/unitTests-results/RcppArmadillo-unitTests.html | 6
inst/doc/unitTests-results/RcppArmadillo-unitTests.txt | 28 +-
inst/include/armadillo_bits/Col_bones.hpp | 152 ++++++++--------
inst/include/armadillo_bits/Mat_bones.hpp | 148 ++++++++-------
inst/include/armadillo_bits/Mat_meat.hpp | 69 ++++++-
inst/include/armadillo_bits/Row_bones.hpp | 148 ++++++++-------
inst/include/armadillo_bits/arma_version.hpp | 2
inst/include/armadillo_bits/compiler_setup.hpp | 9
14 files changed, 364 insertions(+), 246 deletions(-)
Title: Fraction Proliferation via a quiescent growth model
Diff between fracprolif versions 1.0.2 dated 2012-04-27 and 1.0.3 dated 2012-07-12
Description: Functions for fitting data to a quiescent growth model,
i.e. a growth process that involves members of the population
who stop dividing or propagating.
Author: Shawn Garbett, Darren Tyson
Maintainer: Shawn Garbett
DESCRIPTION | 10 +++---
MD5 | 11 +++----
NAMESPACE | 6 +++
R/q.rates.R | 72 +++++++++++++++++++++++++++++++++++-----------
man/fracprolif-package.Rd | 12 +++----
man/q.rates.Rd | 5 +--
man/qrate-class.Rd |only
7 files changed, 81 insertions(+), 35 deletions(-)
Title: Tools to Fit Flexible Parametric Curves
Diff between FlexParamCurve versions 1.4-1 dated 2012-06-27 and 1.4-2 dated 2012-07-12
More information about FlexParamCurve at CRAN
Description: selfStart functions and model selection tools to fit
parametric curves in nls, nlsList and nlme frameworks.
Author: Stephen Oswald
Maintainer: Stephen Oswald
DESCRIPTION | 9 +++---
MD5 | 18 ++++++------
R/modpar.R | 62 +++++++++++++++++++++---------------------
R/pn.mod.compare.R | 10 +++---
R/pn.modselect.step.R | 12 ++++----
man/FlexParamCurve-package.Rd | 4 +-
man/SSposnegRichards.Rd | 2 -
man/modpar.Rd | 6 +++-
man/pn.mod.compare.Rd | 10 +++---
man/pn.modselect.step.Rd | 11 ++++---
10 files changed, 76 insertions(+), 68 deletions(-)
Permanent link
Title: Exploratory analysis with the singular value decomposition.
Diff between ExPosition versions 1.0 dated 2012-06-20 and 1.1 dated 2012-07-12
Description: ExPosition is for descriptive (i.e., fixed-effects)
multivariate analysis with the singular value decomposition.
Author: Derek Beaton, Cherise R. Chin Fatt, Herve Abdi
Maintainer: Derek Beaton
DESCRIPTION | 8 ++++----
MD5 | 16 ++++++++--------
R/caNorm.R | 7 ++++---
R/computeMW.R | 1 +
R/coreCA.R | 28 ++++++++++++++++------------
R/epMCA.R | 2 +-
R/hellingerNorm.R | 7 ++++---
R/mca.eigen.fix.R | 27 +++++++++++++++------------
man/ExPosition-package.Rd | 4 ++--
9 files changed, 55 insertions(+), 45 deletions(-)