Title: IDI and NRI for comparing competing risk prediction models with
censored survival data
Diff between survIDINRI versions 1.0-2 dated 2012-11-20 and 1.0-3 dated 2012-12-07
Description: Performs inference for a class of measures to compare
competing risk prediction models with censored survival data.
The class includes the integrated discrimination improvement
index (IDI) and category-less net reclassification index (NRI).
Author: Hajime Uno, Tianxi Cai
Maintainer: Hajime Uno
DESCRIPTION | 8 ++++----
IDI.INF.Rd |only
MD5 | 7 ++++---
man/IDI.INF.Rd | 15 ++++++++++-----
man/survIDINRI-package.Rd | 17 +++++++++++------
5 files changed, 29 insertions(+), 18 deletions(-)
Title: Response-surface analysis
Diff between rsm versions 1.41 dated 2012-07-28 and 2.00 dated 2012-12-07
Description: Provides functions to generate response-surface designs,
fit first- and second-order response-surface models, make
surface plots, obtain the path of steepest ascent, and do
canonical analysis.
Author: Russell V. Lenth
Maintainer: Russell V Lenth
rsm-1.41/rsm/R/sysdata.rda |only
rsm-1.41/rsm/inst/doc/rsm-plots-basics.pdf |only
rsm-1.41/rsm/inst/doc/rsm-plots-cont1.pdf |only
rsm-1.41/rsm/inst/doc/rsm-plots-cont2.pdf |only
rsm-1.41/rsm/inst/doc/rsm-plots-lessbas.pdf |only
rsm-1.41/rsm/inst/doc/rsm-plots-persp.pdf |only
rsm-1.41/rsm/inst/doc/rsm.bib |only
rsm-2.00/rsm/DESCRIPTION | 15
rsm-2.00/rsm/MD5 | 73 +-
rsm-2.00/rsm/NAMESPACE | 23
rsm-2.00/rsm/R/bbd.R | 37 -
rsm-2.00/rsm/R/ccd.R | 851 ++++++++++++++++++++++++----
rsm-2.00/rsm/R/coding.R | 363 ++++++++---
rsm-2.00/rsm/R/contour-lm.R | 554 +++++++++---------
rsm-2.00/rsm/R/datasets.R |only
rsm-2.00/rsm/R/rsm.R | 355 +++++++----
rsm-2.00/rsm/R/varfcn.R |only
rsm-2.00/rsm/inst/NEWS | 78 ++
rsm-2.00/rsm/inst/doc/rs-illus.Rtex |only
rsm-2.00/rsm/inst/doc/rs-illus.pdf |only
rsm-2.00/rsm/inst/doc/rsm-plots.Rtex | 6
rsm-2.00/rsm/inst/doc/rsm-plots.pdf |binary
rsm-2.00/rsm/inst/doc/rsm.Rtex | 186 ++++--
rsm-2.00/rsm/inst/doc/rsm.pdf |binary
rsm-2.00/rsm/man/ChemReact.Rd | 21
rsm-2.00/rsm/man/FO.Rd | 20
rsm-2.00/rsm/man/bbd.Rd | 18
rsm-2.00/rsm/man/ccd.Rd | 162 +++--
rsm-2.00/rsm/man/ccd.pick.Rd | 19
rsm-2.00/rsm/man/codata.Rd |only
rsm-2.00/rsm/man/coded.data.Rd | 166 ++++-
rsm-2.00/rsm/man/contour.lm.Rd | 61 +-
rsm-2.00/rsm/man/heli.Rd | 2
rsm-2.00/rsm/man/join.Rd |only
rsm-2.00/rsm/man/model.data.Rd | 4
rsm-2.00/rsm/man/rsm-package.Rd | 13
rsm-2.00/rsm/man/rsm.Rd | 69 +-
rsm-2.00/rsm/man/steepest.Rd | 7
rsm-2.00/rsm/man/varfcn.Rd |only
rsm-2.00/rsm/vignettes |only
40 files changed, 2230 insertions(+), 873 deletions(-)
Title: Distance sampling analyses
Diff between Rdistance versions 1.0 dated 2012-03-06 and 1.1 dated 2012-12-07
Description: Analysis of line transect surveys. Estimates
distance-based sightability functions and abundances.
Author: Trent McDonald, with contributions from Ryan Nielson, James
Griswald, and Patrick McCann.
Maintainer: Trent McDonald
DESCRIPTION | 11 ++++++-----
MD5 | 46 +++++++++++++++++++++++-----------------------
R/F.abund.estim.r | 37 ++++++++++++++++++++++++++++++++-----
R/plot.dfunc.r | 2 +-
R/zzz.R | 7 ++++---
man/AIC.dfunc.Rd | 11 +++++++----
man/ESW.Rd | 3 +++
man/F.abund.estim.Rd | 25 ++++++++++++++++++-------
man/F.automated.CDA.Rd | 4 +++-
man/F.dfunc.estim.Rd | 5 +++--
man/F.double.obs.prob.Rd | 1 +
man/F.gx.estim.Rd | 3 +++
man/F.maximize.g.Rd | 5 +++--
man/F.nLL.Rd | 1 +
man/Gamma.like.Rd | 4 +++-
man/Rdistance-package.Rd | 2 +-
man/coef.dfunc.Rd | 3 +++
man/cosine.expansion.Rd | 1 +
man/hermite.expansion.Rd | 1 +
man/plot.dfunc.Rd | 5 +++--
man/print.abund.Rd | 5 ++++-
man/print.dfunc.Rd | 5 ++++-
man/simple.expansion.Rd | 1 +
man/uniform.like.Rd | 5 ++++-
24 files changed, 133 insertions(+), 60 deletions(-)
Title: Joint Modeling of Longitudinal and Survival Data
Diff between JM versions 1.0-1 dated 2012-09-17 and 1.1-0 dated 2012-12-07
Description: Shared parameter models for the joint modeling of
longitudinal and time-to-event data.
Author: Dimitris Rizopoulos
Maintainer: Dimitris Rizopoulos
DESCRIPTION | 8 ++++----
MD5 | 22 +++++++++++-----------
R/plot.jointModel.R | 4 ++--
data/aids.id.rda |binary
data/aids.rda |binary
data/pbc2.id.rda |binary
data/pbc2.rda |binary
data/prothro.rda |binary
data/prothros.rda |binary
inst/NEWS | 8 ++++++++
man/JM.Rd | 4 ++--
man/jointModel.Rd | 4 ++--
12 files changed, 29 insertions(+), 21 deletions(-)
Title: Rcpp integration for Armadillo templated linear algebra library
Diff between RcppArmadillo versions 0.3.4.4 dated 2012-11-16 and 0.3.6.0 dated 2012-12-07
Description: R and Armadillo integration using Rcpp Armadillo is a
templated C++ linear algebra library (by Conrad Sanderson) that
aims towards a good balance between speed and ease of use.
Integer, floating point and complex numbers are supported, as
well as a subset of trigonometric and statistics functions.
Various matrix decompositions are provided through optional
integration with LAPACK and ATLAS libraries.
A delayed evaluation approach is employed (during compile time) to
combine several operations into one, and to reduce (or
eliminate) the need for temporaries. This is accomplished
through recursive templates and template meta-programming.
This library is useful if C++ has been decided as the language of
choice (due to speed and/or integration capabilities), rather
than another language.
The RcppArmadillo package includes the header files from the templated
Armadillo library (currently version 3.6.0). Thus users do not
need to install Armadillo itself in order to use RcppArmadillo.
This Armadillo integration provides a nice illustration of the
capabilities of the Rcpp package for seamless R and C++
integration.
Armadillo is licensed under the GNU LGPL version 3 or later, while
RcppArmadillo (the Rcpp bindings/bridge to Armadillo) is
licensed under the GNU GPL version 2 or later, as is the rest
of Rcpp.
Author: Romain Francois, Dirk Eddelbuettel and Doug Bates
Maintainer: Dirk Eddelbuettel
ChangeLog | 6
DESCRIPTION | 8
MD5 | 124
inst/NEWS.Rd | 16
inst/examples/fastLm.r | 2
inst/include/armadillo | 6
inst/include/armadillo_bits/Col_bones.hpp | 3
inst/include/armadillo_bits/Col_meat.hpp | 15
inst/include/armadillo_bits/Cube_meat.hpp | 138 -
inst/include/armadillo_bits/Mat_meat.hpp | 21
inst/include/armadillo_bits/Row_bones.hpp | 1
inst/include/armadillo_bits/Row_meat.hpp | 15
inst/include/armadillo_bits/SpGlue_bones.hpp | 7
inst/include/armadillo_bits/SpMat_bones.hpp | 106
inst/include/armadillo_bits/SpMat_iterators_meat.hpp | 273 +-
inst/include/armadillo_bits/SpMat_meat.hpp | 548 ++++
inst/include/armadillo_bits/SpOp_bones.hpp | 7
inst/include/armadillo_bits/SpProxy.hpp | 147 -
inst/include/armadillo_bits/SpRow_bones.hpp | 8
inst/include/armadillo_bits/SpRow_meat.hpp | 24
inst/include/armadillo_bits/SpSubview_bones.hpp | 106
inst/include/armadillo_bits/SpSubview_iterators_meat.hpp | 298 +-
inst/include/armadillo_bits/SpSubview_meat.hpp | 322 ++
inst/include/armadillo_bits/arma_ostream_bones.hpp | 6
inst/include/armadillo_bits/arma_ostream_meat.hpp | 47
inst/include/armadillo_bits/arma_version.hpp | 6
inst/include/armadillo_bits/compiler_setup.hpp | 37
inst/include/armadillo_bits/debug.hpp | 105
inst/include/armadillo_bits/diskio_bones.hpp | 65
inst/include/armadillo_bits/diskio_meat.hpp | 1907 +++++----------
inst/include/armadillo_bits/eglue_core_meat.hpp | 22
inst/include/armadillo_bits/eop_core_meat.hpp | 22
inst/include/armadillo_bits/fn_accu.hpp | 7
inst/include/armadillo_bits/fn_elem.hpp | 68
inst/include/armadillo_bits/fn_mean.hpp | 76
inst/include/armadillo_bits/fn_norm.hpp | 220 +
inst/include/armadillo_bits/fn_sort.hpp | 51
inst/include/armadillo_bits/fn_sort_index.hpp | 139 -
inst/include/armadillo_bits/fn_strans.hpp | 11
inst/include/armadillo_bits/fn_trans.hpp | 44
inst/include/armadillo_bits/fn_trunc_exp.hpp | 12
inst/include/armadillo_bits/fn_trunc_log.hpp | 10
inst/include/armadillo_bits/fn_var.hpp | 60
inst/include/armadillo_bits/forward_bones.hpp | 10
inst/include/armadillo_bits/glue_relational_meat.hpp | 16
inst/include/armadillo_bits/hdf5_misc.hpp | 2
inst/include/armadillo_bits/memory.hpp | 10
inst/include/armadillo_bits/mtSpOp_bones.hpp |only
inst/include/armadillo_bits/mtSpOp_meat.hpp |only
inst/include/armadillo_bits/op_median_bones.hpp | 2
inst/include/armadillo_bits/op_misc_meat.hpp | 126
inst/include/armadillo_bits/op_relational_meat.hpp | 32
inst/include/armadillo_bits/op_shuffle_meat.hpp | 10
inst/include/armadillo_bits/spop_max_meat.hpp | 37
inst/include/armadillo_bits/spop_mean_bones.hpp |only
inst/include/armadillo_bits/spop_mean_meat.hpp |only
inst/include/armadillo_bits/spop_min_meat.hpp | 37
inst/include/armadillo_bits/spop_misc_bones.hpp | 31
inst/include/armadillo_bits/spop_misc_meat.hpp | 118
inst/include/armadillo_bits/spop_sum_bones.hpp | 3
inst/include/armadillo_bits/spop_sum_meat.hpp | 90
inst/include/armadillo_bits/spop_var_bones.hpp |only
inst/include/armadillo_bits/spop_var_meat.hpp |only
inst/include/armadillo_bits/traits.hpp | 32
inst/include/armadillo_bits/unwrap_spmat.hpp | 15
man/RcppArmadillo-package.Rd | 40
66 files changed, 3738 insertions(+), 1989 deletions(-)
Title: multinomial logit model
Diff between mlogit versions 0.2-2 dated 2011-11-23 and 0.2-3 dated 2012-12-07
Description: Estimation of the multinomial logit model
Author: Yves Croissant
Maintainer: Yves Croissant
mlogit-0.2-2/mlogit/inst/doc/LongExamples.R |only
mlogit-0.2-2/mlogit/inst/doc/README |only
mlogit-0.2-2/mlogit/inst/doc/bibmlogit.bib |only
mlogit-0.2-2/mlogit/inst/doc/creation_graphiques.R |only
mlogit-0.2-2/mlogit/inst/doc/fgraphiques.R |only
mlogit-0.2-2/mlogit/inst/doc/graph |only
mlogit-0.2-2/mlogit/inst/doc/mlogit.sty |only
mlogit-0.2-2/mlogit/inst/doc/threetests.R |only
mlogit-0.2-3/mlogit/DESCRIPTION | 13 +--
mlogit-0.2-3/mlogit/MD5 | 85 ++++++++++-----------
mlogit-0.2-3/mlogit/R/mlogit.R | 11 +-
mlogit-0.2-3/mlogit/R/mlogit.tools.R | 2
mlogit-0.2-3/mlogit/changelog | 3
mlogit-0.2-3/mlogit/data/Beef.rda |binary
mlogit-0.2-3/mlogit/data/Car.rda |binary
mlogit-0.2-3/mlogit/data/Catsup.rda |binary
mlogit-0.2-3/mlogit/data/Cracker.rda |binary
mlogit-0.2-3/mlogit/data/Electricity.rda |binary
mlogit-0.2-3/mlogit/data/Examples.rda |binary
mlogit-0.2-3/mlogit/data/Fishing.rda |binary
mlogit-0.2-3/mlogit/data/Game.rda |binary
mlogit-0.2-3/mlogit/data/Game2.rda |binary
mlogit-0.2-3/mlogit/data/HC.rda |binary
mlogit-0.2-3/mlogit/data/Heating.rda |binary
mlogit-0.2-3/mlogit/data/Ketchup.rda |binary
mlogit-0.2-3/mlogit/data/MobilePhones.rda |binary
mlogit-0.2-3/mlogit/data/Mode.rda |binary
mlogit-0.2-3/mlogit/data/ModeCanada.rda |binary
mlogit-0.2-3/mlogit/data/Telephone.rda |binary
mlogit-0.2-3/mlogit/data/TollRoad.rda |binary
mlogit-0.2-3/mlogit/data/Train.rda |binary
mlogit-0.2-3/mlogit/data/Tuna.rda |binary
mlogit-0.2-3/mlogit/data/Yogurt.rda |binary
mlogit-0.2-3/mlogit/inst/doc/Exercises.pdf |binary
mlogit-0.2-3/mlogit/inst/doc/mlogit.pdf |binary
mlogit-0.2-3/mlogit/vignettes |only
36 files changed, 63 insertions(+), 51 deletions(-)
Title: Taxonomic search and phylogeny retrieval.
Diff between taxize versions 0.0.1 dated 2012-12-04 and 0.0.2 dated 2012-12-07
Description: Taxonomic search and phylogeny retrieval.
Author: Scott Chamberlain [aut, cre], Eduard Szoecs [aut], Carl
Boettiger [aut]
Maintainer: Scott Chamberlain
taxize-0.0.1/taxize/R/iplant_tnrsmatch.R |only
taxize-0.0.1/taxize/inst |only
taxize-0.0.1/taxize/man/iplant_tnrsmatch.Rd |only
taxize-0.0.1/taxize/tests |only
taxize-0.0.2/taxize/DESCRIPTION | 23 +++++-------
taxize-0.0.2/taxize/MD5 | 53 +++++-----------------------
taxize-0.0.2/taxize/NAMESPACE | 1
taxize-0.0.2/taxize/NEWS |only
taxize-0.0.2/taxize/R/get_genes_avail.R | 8 ++--
taxize-0.0.2/taxize/R/get_seqs.R | 8 ++--
taxize-0.0.2/taxize/R/gnr_datasources.R | 1
taxize-0.0.2/taxize/R/gnr_resolve.R | 1
taxize-0.0.2/taxize/R/iucn_summary.R | 2 -
taxize-0.0.2/taxize/README.md | 1
taxize-0.0.2/taxize/man/gnr_datasources.Rd | 3 -
taxize-0.0.2/taxize/man/gnr_resolve.Rd | 3 -
16 files changed, 32 insertions(+), 72 deletions(-)
Title: Package development utilities
Diff between pkgmaker versions 0.9 dated 2012-11-03 and 0.10.1 dated 2012-12-07
Description: This package provides some low-level utilities to use for
package development. It currently provides managers for
multiple package specific options and registries, vignette,
unit test and bibtex related utilities. It serves as a base
package for packages like NMF, RcppOctave, doRNG, and as an
incubator package for other general purposes utilities, that
will eventually be packaged separately. It is still under
heavy development and changes in the interface(s) are more than
likely to happen.
Author: Renaud Gaujoux
Maintainer: Renaud Gaujoux
DESCRIPTION | 15 +--
MD5 | 58 +++++++-----
NAMESPACE | 19 +++-
R/bibtex.R | 10 +-
R/colors.R |only
R/devutils.R | 152 ++++++++++++++++++++++-----------
R/files.R | 2
R/graphics.R |only
R/namespace.R | 7 -
R/options.R | 17 ++-
R/package-extra.R |only
R/package.R | 1
R/packages.R | 82 +++++++++++++++--
R/registry.R | 103 +++++++++++++++++++---
R/unitTests.R | 58 +++++++-----
R/utils.R | 179 ++++++++++++++++++++++++++++++++++++---
R/vignette.R | 77 +++++++++++++---
inst/doc/pkgmaker-unitTests.Rnw | 41 +++++++-
inst/doc/pkgmaker-unitTests.pdf |binary
inst/tests/runit.options.r | 43 +++++++++
inst/vignette.mk | 66 ++++++++++----
man/alphacol.Rd |only
man/devutils.Rd | 18 ++-
man/expand_list.Rd |only
man/graphics-utils.Rd |only
man/install.dependencies.Rd |only
man/packageData.Rd |only
man/packageExtra.Rd |only
man/quickinstall.Rd | 5 -
man/registry.Rd | 20 +++-
man/sVariable.Rd |only
man/str_diff.Rd | 2
man/str_out.Rd | 18 ++-
man/write.bib.Rd | 5 -
vignettes/pkgmaker-unitTests.Rnw | 41 +++++++-
35 files changed, 817 insertions(+), 222 deletions(-)
Title: An R interface for the ChemCpp library
Diff between Rchemcpp versions 1.0.4 dated 2012-12-03 and 1.0.5 dated 2012-12-07
Description: Rchemcpp compares sets of molecules and returns a
similarity matrix. This matrix can be used as input to support
vector machines. It wraps the c++ library 'chemcpp' by P. Mahe
and J.-L. Perret to emulate the tools "sd2gram",
"sd2gram3Dspectrum", "sd2gramSubtree", "sd2gram3Dpharma" and
"sd2gramSpectrum".
Author: Michael Mahr, Guenter Klambauer
Maintainer: Guenter Klambauer
DESCRIPTION | 6 +++---
MD5 | 6 +++---
inst/doc/Rchemcpp.pdf |binary
src/chemcpp/src/Makefile | 9 +++++++--
4 files changed, 13 insertions(+), 8 deletions(-)
Title: Quantitative Analysis of Mass Spectrometry Data
Diff between MALDIquant versions 1.4 dated 2012-10-30 and 1.5 dated 2012-12-07
Description: MALDIquant provides a complete analysis pipeline for
MALDI-TOF and other mass spectrometry data. Distinctive
features include baseline subtraction using the SNIP algorithm,
peak alignment using warping functions, handling of replicated
measurements as well as allowing spectra with different
resolutions.
Author: Sebastian Gibb [aut, cre], Korbinian Strimmer [ths]
Maintainer: Sebastian Gibb
DESCRIPTION | 8 +--
LICENSE |only
MD5 | 48 ++++++++++++-----------
NAMESPACE | 1
NEWS | 17 ++++++--
R/AllGenerics.R | 2
R/arguments-functions.R | 24 ++---------
R/binPeaks-functions.R | 6 +-
R/determineWarpingFunctions-functions.R | 66 +++++++++++++-------------------
R/doByLabels-functions.R | 11 +++--
R/findLocalMaxima-methods.R | 7 +--
R/grouper-functions.R | 6 +-
R/labelPeaks-methods.R | 58 +++++++++++++++-------------
R/localMaxima-functions.R | 23 +++++++++--
R/merge-functions.R | 8 +--
R/movingAverage-functions.R |only
R/warp-functions.R | 6 +-
R/warpingFunction-functions.R | 6 +-
demo/warping.R | 3 -
demo/workflow.R | 3 -
man/MALDIquant-internal.Rd | 1
man/MALDIquant-package.Rd | 13 +-----
man/labelPeaks-methods.Rd | 24 +++++++----
man/movingAverage-functions.Rd |only
src/localMaxima.c |only
src/lowerConvexHull.c | 8 +--
src/snip.c | 8 +--
27 files changed, 184 insertions(+), 173 deletions(-)
Title: Random Forests for Survival, Regression and Classification
(RF-SRC)
Diff between randomForestSRC versions 1.0.1 dated 2012-11-13 and 1.0.2 dated 2012-12-07
More information about randomForestSRC at CRAN
Description: A unified treatment of Breiman's random forests for
survival, regression and classification problems based on
Ishwaran and Kogalur's random survival forests (RSF) package.
The package runs in both serial and parallel (OpenMP) modes.
Author: Hemant Ishwaran
Maintainer: Udaya B. Kogalur
DESCRIPTION | 17 +-
MD5 | 154 ++++++++++++-------------
R/data.utilities.R | 12 +-
R/factor.utilities.R | 4
R/find.interaction.R | 4
R/generic.predict.rfsrc.R | 5
R/impute.rfsrc.R | 25 +---
R/max.subtree.R | 4
R/plot.competing.risk.R | 4
R/plot.rfsrc.R | 8 -
R/plot.survival.R | 53 ++++----
R/plot.variable.R | 4
R/predict.rfsrc.R | 4
R/print.rfsrc.R | 6 -
R/restore.rfsrc.R | 4
R/rf2rfz.R | 4
R/rfsrc.R | 27 ++--
R/rfsrc.news.R | 4
R/utilities.R | 6 -
R/var.select.R | 8 -
R/vimp.R | 4
R/zzz.R | 4
configure.ac | 2
inst/NEWS | 15 ++
inst/doc/rsf-Rnews.pdf |binary
man/impute.Rd | 5
man/predict.rfsrc.Rd | 28 +++-
man/randomForestSRC_package.Rd | 90 ++++++++-------
man/rfsrc.Rd | 135 ++++++++++++----------
src/bootstrap.c | 4
src/bootstrap.h | 4
src/classification.c | 6 -
src/classification.h | 4
src/dataParser.c | 4
src/dataParser.h | 4
src/entry.c | 4
src/entry.h | 4
src/extern.h | 4
src/factor.h | 4
src/factorOps.c | 4
src/factorOps.h | 4
src/global.h | 4
src/importance.c | 4
src/importance.h | 4
src/impute.c | 11 +
src/impute.h | 4
src/node.h | 4
src/nodeOps.c | 4
src/nodeOps.h | 4
src/nrutil.c | 4
src/nrutil.h | 4
src/random.c | 4
src/random.h | 4
src/regression.c | 4
src/regression.h | 4
src/rfsrc.c | 17 ++
src/rfsrc.h | 4
src/rfsrcUtil.c | 4
src/rfsrcUtil.h | 4
src/split.c | 4
src/split.h | 4
src/splitSurv.c | 4
src/splitSurv.h | 4
src/splitUtil.c | 4
src/splitUtil.h | 4
src/stack.c | 6 -
src/stack.h | 4
src/survival.c | 4
src/survival.h | 4
src/survivalE.c | 4
src/survivalE.h | 4
src/terminal.h | 4
src/trace.c | 4
src/trace.h | 4
src/tree.c | 4
src/tree.h | 4
src/treeUtil.c | 246 ++++++++++++++++++-----------------------
src/treeUtil.h | 5
78 files changed, 565 insertions(+), 538 deletions(-)
Permanent link
Title: Practical Numerical Math Functions
Diff between pracma versions 1.2.5 dated 2012-11-08 and 1.3.1 dated 2012-12-07
Description: Implementations of functions in numerical analysis as R
scripts, with a special view on on optimization and time series
routines. Uses Matlab function names where appropriate to
simplify porting.
Author: Hans W Borchers
Maintainer: HwB
pracma-1.2.5/pracma/R/transfinite.R |only
pracma-1.2.5/pracma/man/transfinite.Rd |only
pracma-1.3.1/pracma/DESCRIPTION | 12 ++--
pracma-1.3.1/pracma/MD5 | 60 ++++++++++++--------
pracma-1.3.1/pracma/NEWS | 50 ++++++++++++++++-
pracma-1.3.1/pracma/R/akima.R |only
pracma-1.3.1/pracma/R/bvp.R | 88 ++++++++++++++++++++----------
pracma-1.3.1/pracma/R/clear.R | 3 +
pracma-1.3.1/pracma/R/curvefit.R |only
pracma-1.3.1/pracma/R/hyperbolic.R |only
pracma-1.3.1/pracma/R/kriging.R |only
pracma-1.3.1/pracma/R/lsqlin.R |only
pracma-1.3.1/pracma/R/matlab.R | 64 +++++++++++++++------
pracma-1.3.1/pracma/R/pinv.R |only
pracma-1.3.1/pracma/R/procrustes.R |only
pracma-1.3.1/pracma/R/rank.R | 3 +
pracma-1.3.1/pracma/R/savgol.R | 26 --------
pracma-1.3.1/pracma/R/str2num.R | 21 +++++--
pracma-1.3.1/pracma/R/tictoc.R | 2
pracma-1.3.1/pracma/R/trisolve.R |only
pracma-1.3.1/pracma/R/zzz.R | 6 +-
pracma-1.3.1/pracma/data/brown72.rda |binary
pracma-1.3.1/pracma/data/titanium.rda |binary
pracma-1.3.1/pracma/man/akima.Rd |only
pracma-1.3.1/pracma/man/bvp.Rd | 77 +++++++++++++++++---------
pracma-1.3.1/pracma/man/circlefit.Rd | 2
pracma-1.3.1/pracma/man/clear.Rd | 13 +++-
pracma-1.3.1/pracma/man/curvefit.Rd |only
pracma-1.3.1/pracma/man/hyperbolic.Rd |only
pracma-1.3.1/pracma/man/kriging.Rd |only
pracma-1.3.1/pracma/man/lsqlin.Rd |only
pracma-1.3.1/pracma/man/matlab.Rd | 14 +---
pracma-1.3.1/pracma/man/nullspace.Rd | 4 +
pracma-1.3.1/pracma/man/pracma-package.Rd | 50 ++++++++++++++++-
pracma-1.3.1/pracma/man/procrustes.Rd |only
pracma-1.3.1/pracma/man/ratinterp.Rd | 2
pracma-1.3.1/pracma/man/str2num.Rd | 10 ++-
pracma-1.3.1/pracma/man/tictoc.Rd | 3 +
pracma-1.3.1/pracma/man/trigonometric.Rd |only
pracma-1.3.1/pracma/man/trisolve.Rd |only
40 files changed, 352 insertions(+), 158 deletions(-)
Title: Fitting Generalized Linear Models
Diff between glm2 versions 1.1 dated 2012-11-28 and 1.1.1 dated 2012-12-07
Description: Fits generalized linear models using the same model
specification as glm in the stats package, but with a modified
default fitting method that provides greater stability for
models that may fail to converge using glm
Author: Ian Marschner (using code from glm and glm.fit in the stats
package)
Maintainer: Ian Marschner
DESCRIPTION | 8 ++++----
MD5 | 6 +++---
R/glm.fit2.R | 2 +-
man/glm2-package.Rd | 4 ++--
4 files changed, 10 insertions(+), 10 deletions(-)