Title: Flexible regression models for survival data.
Diff between timereg versions 1.6-9 dated 2012-12-18 and 1.7.0 dated 2013-01-16
Description: Programs for Martinussen and Scheike (2006), `Dynamic
Regression Models for Survival Data', Springer Verlag. Plus
more recent developments. Additive survival model,
semiparametric proportional odds model, cumulative residuals,
excess risk models and more. Flexible competing risks
regression including GOF-tests. Two-stage frailty modelling.
PLS for the additive risk model. Lasso in ahaz package.
Author: Thomas Scheike with contributions from Torben Martinussen and
Jeremy Silver
Maintainer: Thomas Scheike
timereg-1.6-9/timereg/R/libdef.r |only
timereg-1.7.0/timereg/DESCRIPTION | 8 +++----
timereg-1.7.0/timereg/MD5 | 28 ++++++++++++-------------
timereg-1.7.0/timereg/R/base.r | 23 --------------------
timereg-1.7.0/timereg/R/clusterindex-reshape.r |only
timereg-1.7.0/timereg/R/comprisk.r | 12 ++++++++--
timereg-1.7.0/timereg/R/predict-timereg.r | 22 +++++++++++--------
timereg-1.7.0/timereg/man/Gprop.odds.Rd | 8 ++++---
timereg-1.7.0/timereg/man/dynreg.Rd | 3 +-
timereg-1.7.0/timereg/man/krylow.pls.Rd | 2 +
timereg-1.7.0/timereg/man/plot.dynreg.Rd | 2 +
timereg-1.7.0/timereg/man/predict.timereg.Rd | 2 +
timereg-1.7.0/timereg/man/timecox.Rd | 2 +
timereg-1.7.0/timereg/src/comprisk.c | 4 +--
timereg-1.7.0/timereg/src/matrix.h | 2 -
timereg-1.7.0/timereg/src/pred.c | 17 ++++++++++-----
16 files changed, 70 insertions(+), 65 deletions(-)
Title: Optimal stratification of sampling frames for multipurpose
sampling surveys
Diff between SamplingStrata versions 1.0 dated 2012-12-04 and 1.0-1 dated 2013-01-16
More information about SamplingStrata at CRAN
Description: In the field of stratified sampling design, this package
offers an approach for the determination of the best
stratification of a sampling frame, the one that ensures the
minimum sample cost under the condition to satisfy precision
constraints in a multivariate and multidomain case. This
approach is based on the use of the genetic algorithm: each
solution (i.e. a particular partition in strata of the sampling
frame) is considered as an individual in a population; the
fitness of all individuals is evaluated applying the
Bethel-Chromy algorithm to calculate the sampling size
satisfying precision constraints on the target estimates.
Functions in the package allows to: (a) analyse the obtained
results of the optimisation step; (b) assign the new strata
labels to the sampling frame; (c) select a sample from the new
frame accordingly to the best allocation. Functions for the
execution of the genetic algorithm are a modified version of
the functions in the 'genalg' package.
Author: Giulio Barcaroli, Daniela Pagliuca and Egon Willighagen
Maintainer: Giulio Barcaroli
SamplingStrata-1.0-1/SamplingStrata/DESCRIPTION | 28 --
SamplingStrata-1.0-1/SamplingStrata/MD5 | 52 ++--
SamplingStrata-1.0-1/SamplingStrata/NEWS |only
SamplingStrata-1.0-1/SamplingStrata/R/aggrStrata.r | 7
SamplingStrata-1.0-1/SamplingStrata/R/buildStrataDF.R | 6
SamplingStrata-1.0-1/SamplingStrata/R/checkInput.R | 4
SamplingStrata-1.0-1/SamplingStrata/R/evalSolution.r | 42 ++--
SamplingStrata-1.0-1/SamplingStrata/R/optimizeStrata.R | 71 ++----
SamplingStrata-1.0-1/SamplingStrata/R/plot.rbga.R | 4
SamplingStrata-1.0-1/SamplingStrata/R/rbgaV2.R | 22 --
SamplingStrata-1.0-1/SamplingStrata/R/selectSample.R | 65 ++++--
SamplingStrata-1.0-1/SamplingStrata/R/strataGenalg.R | 105 +++++-----
SamplingStrata-1.0-1/SamplingStrata/R/summary.rbga.R | 5
SamplingStrata-1.0-1/SamplingStrata/R/tuneParameters.r | 43 ++--
SamplingStrata-1.0-1/SamplingStrata/R/updateFrame.R | 20 +
SamplingStrata-1.0-1/SamplingStrata/R/updateStrata.r | 48 +---
SamplingStrata-1.0-1/SamplingStrata/R/var.bin.R | 7
SamplingStrata-1.0-1/SamplingStrata/inst/doc/SamplingStrataVignette.Rnw | 20 +
SamplingStrata-1.0-1/SamplingStrata/inst/doc/SamplingStrataVignette.pdf |binary
SamplingStrata-1.0-1/SamplingStrata/inst/doc/tuneParameters.pdf |binary
SamplingStrata-1.0-1/SamplingStrata/man/bethel.Rd | 2
SamplingStrata-1.0-1/SamplingStrata/man/evalSolution.Rd | 59 ++++-
SamplingStrata-1.0-1/SamplingStrata/man/optimizeStrata.Rd | 25 +-
SamplingStrata-1.0-1/SamplingStrata/man/selectSample.Rd | 16 -
SamplingStrata-1.0-1/SamplingStrata/man/tuneParameters.Rd | 43 ++--
SamplingStrata-1.0-1/SamplingStrata/man/updateFrame.Rd | 14 -
SamplingStrata-1.0-1/SamplingStrata/man/updateStrata.Rd | 22 +-
SamplingStrata-1.0/SamplingStrata/LICENCE.cda |only
28 files changed, 422 insertions(+), 308 deletions(-)
Permanent link
Title: R Commander
Diff between Rcmdr versions 1.9-2 dated 2012-10-14 and 1.9-3 dated 2013-01-16
Description: A platform-independent basic-statistics GUI (graphical
user interface) for R, based on the tcltk package.
Author: John Fox [aut, cre], Liviu Andronic [ctb], Michael Ash [ctb],
Milan Bouchet-Valat [ctb], Theophilius Boye [ctb], Stefano
Calza [ctb], Andy Chang [ctb], Philippe Grosjean [ctb], Richard
Heiberger [ctb], Kosar Karimi Pour [ctb], G. Jay Kerns [ctb],
Renaud Lancelot [ctb], Matthieu Lesnoff [ctb], Uwe Ligges
[ctb], Samir Messad [ctb], Martin Maechler [ctb], Robert
Muenchen [ctb], Duncan Murdoch [ctb], Erich Neuwirth [ctb], Dan
Putler [ctb], Brian Ripley [ctb], Miroslav Ristic [ctb], Peter
Wolf [ctb]
Maintainer: John Fox
DESCRIPTION | 14
MD5 | 56
NAMESPACE | 27
NEWS | 20
R/cluster.R | 960 +++----
R/commander.R | 51
R/data-menu.R | 48
R/distributions-menu.R | 1118 ++++----
R/distributions-plotDistributions-menu.R | 435 +--
R/distributions-sample.R | 330 +-
R/file-menu.R | 6
R/globals.R | 2
R/model-menu.R | 1592 +++++------
R/sciviews-specific.R | 580 ++--
R/startup.R | 263 -
R/statistics-dimensional-menu.R | 672 ++---
R/statistics-means-menu.R | 2
R/statistics-models-menu.R | 1017 +++----
R/statistics-nonparametric-menu.R | 391 +-
R/statistics-proportions-menu.R | 316 +-
R/statistics-summaries-menu.R | 12
R/statistics-tables-menu.R | 661 ++--
R/utilities.R | 4145 +++++++++++++++----------------
inst/etc/R-logo.ico |only
inst/po/fr/LC_MESSAGES/R-Rcmdr.mo |binary
man/Commander.Rd | 56
man/Rcmdr-internal.Rd |only
man/Rcmdr-package.Rd | 14
man/Rcmdr.Utilities.Rd | 6
po/R-fr.po | 4
30 files changed, 6500 insertions(+), 6298 deletions(-)
Title: SBML Integration in Package sybil
Diff between sybilSBML versions 1.1.15 dated 2012-10-15 and 1.1.16 dated 2013-01-16
Description: SBML (Systems Biology Markup Language) integration in
sybil
Author: Gabriel Gelius-Dietrich [aut, cre]
Maintainer: Gabriel Gelius-Dietrich
sybilSBML-1.1.15/sybilSBML/NEWS.Rd |only
sybilSBML-1.1.16/sybilSBML/DESCRIPTION | 8 ++++----
sybilSBML-1.1.16/sybilSBML/MD5 | 15 +++++++--------
sybilSBML-1.1.16/sybilSBML/R/readSBMLmod.R | 8 ++++----
sybilSBML-1.1.16/sybilSBML/R/uglyHack.R | 8 ++++----
sybilSBML-1.1.16/sybilSBML/inst/NEWS.Rd | 8 ++++++++
sybilSBML-1.1.16/sybilSBML/inst/doc/sybilSBML.Rnw | 2 +-
sybilSBML-1.1.16/sybilSBML/inst/doc/sybilSBML.pdf |binary
sybilSBML-1.1.16/sybilSBML/vignettes/sybilSBML.Rnw | 2 +-
9 files changed, 29 insertions(+), 22 deletions(-)
Title: Set the value of options("width") on terminal emulators
Diff between setwidth versions 1.0-2 dated 2012-12-24 and 1.0-3 dated 2013-01-16
Description: Automatically sets the value of options("width") when the
terminal emulator is resized. The functions of this package
only work if R is compiled for Linux systems and it is running
interactively in a terminal emulator.
Author: Jakson Aquino
Maintainer: Jakson Alves de Aquino
DESCRIPTION | 8 ++++----
MD5 | 8 ++++----
NEWS | 4 ++++
R/setwidth.R | 2 +-
src/setwidth.c | 14 +++++++++++---
5 files changed, 24 insertions(+), 12 deletions(-)
Title: R Interface to C API of COIN-OR Clp
Diff between clpAPI versions 1.2.1 dated 2012-04-21 and 1.2.2 dated 2013-01-16
Description: R Interface to C API of COIN-OR Clp, depends on COIN-OR
Clp Version >= 1.12.0
Author: Gabriel Gelius-Dietrich [aut, cre]
Maintainer: Gabriel Gelius-Dietrich
clpAPI-1.2.1/clpAPI/NEWS.Rd |only
clpAPI-1.2.2/clpAPI/DESCRIPTION | 14 ++++++++------
clpAPI-1.2.2/clpAPI/MD5 | 29 ++++++++++++++---------------
clpAPI-1.2.2/clpAPI/R/clp.R | 2 +-
clpAPI-1.2.2/clpAPI/R/clpAPI.R | 2 +-
clpAPI-1.2.2/clpAPI/R/clp_ptrClass.R | 2 +-
clpAPI-1.2.2/clpAPI/R/generics.R | 2 +-
clpAPI-1.2.2/clpAPI/R/zzz.R | 2 +-
clpAPI-1.2.2/clpAPI/configure | 18 +++++++++---------
clpAPI-1.2.2/clpAPI/configure.ac | 2 +-
clpAPI-1.2.2/clpAPI/inst/NEWS.Rd | 8 ++++++++
clpAPI-1.2.2/clpAPI/inst/doc/clpAPI.pdf |binary
clpAPI-1.2.2/clpAPI/src/clpAPI.c | 2 +-
clpAPI-1.2.2/clpAPI/src/clpAPI.h | 2 +-
clpAPI-1.2.2/clpAPI/src/clpR.h | 2 +-
clpAPI-1.2.2/clpAPI/src/init.c | 2 +-
16 files changed, 49 insertions(+), 40 deletions(-)
Title: Statistical shape analysis
Diff between shapes versions 1.1-6 dated 2012-09-04 and 1.1-7 dated 2013-01-16
Description: Routines for the statistical analysis of shapes. In
particular, the package provides routines for Procrustes
analysis, displaying shapes and principal components, testing
for mean shape difference, thin-plate spline transformation
grids and comparing covariance matrices.
Author: Ian L. Dryden
Maintainer: Ian Dryden
DESCRIPTION | 12 +-
MD5 | 27 ++++-
R/shapes.R | 244 ++++++++++++++++++++++++++++++++++++++++++-------
data/apes.rda |only
data/macaques.rda |only
data/mice.rda |only
data/sand.rda |only
data/schizophrenia.rda |only
data/steroids.rda |only
man/apes.Rd |only
man/brains.Rd | 10 +-
man/centroid.size.Rd |only
man/frechet.Rd |only
man/macaques.Rd |only
man/mice.Rd |only
man/procGPA.Rd | 27 ++---
man/procOPA.Rd | 2
man/sand.Rd |only
man/schizophrenia.Rd |only
man/shapes-internal.Rd | 4
man/ssriemdist.Rd |only
man/steroids.Rd |only
22 files changed, 262 insertions(+), 64 deletions(-)
Title: An R Package for the Calculation and Visualization of Student
Growth Percentiles & Percentile Growth Trajectories.
Diff between SGP versions 0.9-9.0 dated 2012-07-31 and 1.0-0.0 dated 2013-01-16
Description: Functions to calculate student growth percentiles and
percentile growth projections/trajectories for students using
large scale, longitudinal assessment data. Functions use
quantile regression to estimate the conditional density
associated with each student's achievement history. Percentile
growth projections/trajectories are calculated using the
coefficient matrices derived from the quantile regression
analyses and specify what percentile growth is required for
students to reach future achievement targets.
Author: Damian W. Betebenner
Maintainer: Damian W. Betebenner
SGP-0.9-9.0/SGP/R/viewSummaryGroups.R |only
SGP-0.9-9.0/SGP/man/viewSummaryGroups.Rd |only
SGP-1.0-0.0/SGP/DESCRIPTION | 67 +-
SGP-1.0-0.0/SGP/MD5 | 109 ++-
SGP-1.0-0.0/SGP/NAMESPACE | 27
SGP-1.0-0.0/SGP/R/abcSGP.R | 13
SGP-1.0-0.0/SGP/R/analyzeSGP.R | 766 +++++++++---------------
SGP-1.0-0.0/SGP/R/as.splineMatrix.R | 199 +++++-
SGP-1.0-0.0/SGP/R/baselineSGP.R | 424 +++++--------
SGP-1.0-0.0/SGP/R/bubblePlot.R | 7
SGP-1.0-0.0/SGP/R/bubblePlot_Styles.R | 37 -
SGP-1.0-0.0/SGP/R/capwords.R | 4
SGP-1.0-0.0/SGP/R/checkConfig.R |only
SGP-1.0-0.0/SGP/R/checkSGP.R | 118 +++
SGP-1.0-0.0/SGP/R/checksplineMatrix.R |only
SGP-1.0-0.0/SGP/R/combineSGP.R | 341 ++++------
SGP-1.0-0.0/SGP/R/createKnotsBoundaries.R |only
SGP-1.0-0.0/SGP/R/getAchievementLevel.R |only
SGP-1.0-0.0/SGP/R/getErrorReports.R |only
SGP-1.0-0.0/SGP/R/getHighNeedStatus.R |only
SGP-1.0-0.0/SGP/R/getKnotsBoundaries.R |only
SGP-1.0-0.0/SGP/R/getMaxOrderForProgression.R |only
SGP-1.0-0.0/SGP/R/getPanelData.R |only
SGP-1.0-0.0/SGP/R/getPanelDataVnames.R |only
SGP-1.0-0.0/SGP/R/getPercentileTableNames.R |only
SGP-1.0-0.0/SGP/R/getSGPBaselineConfig.R |only
SGP-1.0-0.0/SGP/R/getSGPConfig.R |only
SGP-1.0-0.0/SGP/R/getStateAbbreviation.R |only
SGP-1.0-0.0/SGP/R/getTargetInitialStatus.R |only
SGP-1.0-0.0/SGP/R/getTargetName.R |only
SGP-1.0-0.0/SGP/R/getTargetSGP.R |only
SGP-1.0-0.0/SGP/R/getTargetScaleScore.R |only
SGP-1.0-0.0/SGP/R/getsplineMatrix.R |only
SGP-1.0-0.0/SGP/R/gofSGP.R |only
SGP-1.0-0.0/SGP/R/growthAchievementPlot.R | 76 +-
SGP-1.0-0.0/SGP/R/mergeSGP.R |only
SGP-1.0-0.0/SGP/R/outputSGP.R | 239 +++++--
SGP-1.0-0.0/SGP/R/prepareSGP.R | 617 ++++++++-----------
SGP-1.0-0.0/SGP/R/splineMatrix-class.R | 31
SGP-1.0-0.0/SGP/R/sqliteSGP.R | 201 +++---
SGP-1.0-0.0/SGP/R/startParallel.R | 54 +
SGP-1.0-0.0/SGP/R/studentGrowthPercentiles.R | 717 ++++++++++------------
SGP-1.0-0.0/SGP/R/studentGrowthPlot.R | 414 ++++--------
SGP-1.0-0.0/SGP/R/studentGrowthPlot_Styles.R | 683 +++++++++++++++++++--
SGP-1.0-0.0/SGP/R/studentGrowthProjections.R | 319 +++++----
SGP-1.0-0.0/SGP/R/summarizeSGP.R | 118 ++-
SGP-1.0-0.0/SGP/R/testSGP.R | 211 ++++++
SGP-1.0-0.0/SGP/R/unique.splineMatrix.R |only
SGP-1.0-0.0/SGP/R/updateSGP.R |only
SGP-1.0-0.0/SGP/R/visualizeSGP.R | 378 ++++++++---
SGP-1.0-0.0/SGP/R/zzz.R |only
SGP-1.0-0.0/SGP/data/SGPstateData.rda |binary
SGP-1.0-0.0/SGP/inst/CITATION | 8
SGP-1.0-0.0/SGP/inst/NEWS | 72 ++
SGP-1.0-0.0/SGP/man/SGP-package.Rd | 6
SGP-1.0-0.0/SGP/man/SGPstateData.Rd | 8
SGP-1.0-0.0/SGP/man/abcSGP.Rd | 8
SGP-1.0-0.0/SGP/man/baselineSGP.Rd | 15
SGP-1.0-0.0/SGP/man/capwords.Rd |only
SGP-1.0-0.0/SGP/man/combineSGP.Rd | 19
SGP-1.0-0.0/SGP/man/gofSGP.Rd |only
SGP-1.0-0.0/SGP/man/outputSGP.Rd | 8
SGP-1.0-0.0/SGP/man/splineMatrix-class.Rd | 6
SGP-1.0-0.0/SGP/man/studentGrowthPercentiles.Rd | 26
SGP-1.0-0.0/SGP/man/studentGrowthPlot_Styles.Rd | 17
SGP-1.0-0.0/SGP/man/studentGrowthProjections.Rd | 26
SGP-1.0-0.0/SGP/man/summarizeSGP.Rd | 12
SGP-1.0-0.0/SGP/man/testSGP.Rd | 5
SGP-1.0-0.0/SGP/man/updateSGP.Rd |only
SGP-1.0-0.0/SGP/man/visualizeSGP.Rd | 23
70 files changed, 3766 insertions(+), 2663 deletions(-)
Title: Models for Analysing Moult Data
Diff between moult versions 1.1 dated 2012-06-23 and 1.2 dated 2013-01-16
Description: Functions to estimate start and duration of moult from
moult data (of types 1 to 5), based on models developed in
Underhill and Zucchini (1988, 1990). Allows modelling
parameters as functions of covariates.
Author: Birgit Erni
Maintainer: Birgit Erni
DESCRIPTION | 12 ++++++------
MD5 | 13 +++++++------
NEWS | 4 ++++
inst |only
man/moult-package.Rd | 7 ++++++-
man/moult.Rd | 7 ++++++-
man/predict.moult.Rd | 16 +++++++++++-----
man/sanderlings.Rd | 2 +-
8 files changed, 41 insertions(+), 20 deletions(-)
Title: Linear Group Fixed Effects
Diff between lfe versions 1.4-731 dated 2011-12-07 and 1.4-771 dated 2013-01-16
Description: Estimate linear models with multiple group fixed effects
Author: Simen Gaure, Ragnar Frisch Centre for Economic Research
Maintainer: Simen Gaure
lfe-1.4-731/lfe/inst/doc/presentation.pdf |only
lfe-1.4-771/lfe/DESCRIPTION | 10
lfe-1.4-771/lfe/MD5 | 51 -
lfe-1.4-771/lfe/NAMESPACE | 4
lfe-1.4-771/lfe/R/kaczmarz.R | 33 -
lfe-1.4-771/lfe/R/lfe.R | 326 ++++++++++-
lfe-1.4-771/lfe/R/utils.R | 50 +
lfe-1.4-771/lfe/aclocal.m4 | 115 ++-
lfe-1.4-771/lfe/configure | 130 ++--
lfe-1.4-771/lfe/exec/lfescript | 55 +
lfe-1.4-771/lfe/inst/doc/CHANGELOG | 854 -----------------------------
lfe-1.4-771/lfe/inst/doc/lfeguide.txt | 22
lfe-1.4-771/lfe/inst/doc/lfehow.Rnw | 10
lfe-1.4-771/lfe/inst/doc/lfehow.pdf |binary
lfe-1.4-771/lfe/man/felm.Rd | 41 +
lfe-1.4-771/lfe/man/kaczmarz.Rd | 11
lfe-1.4-771/lfe/man/lfe-package.Rd | 4
lfe-1.4-771/lfe/src/lfe.c | 114 +++
lfe-1.4-771/lfe/tests/comparelm.Rout.save | 8
lfe-1.4-771/lfe/tests/degenerate.Rout.save | 8
lfe-1.4-771/lfe/tests/efcheck.Rout.save | 12
lfe-1.4-771/lfe/tests/fourfac.Rout.save | 14
lfe-1.4-771/lfe/tests/ivtest.R |only
lfe-1.4-771/lfe/tests/ivtest.Rout.save |only
lfe-1.4-771/lfe/tests/lfetest.Rout.save | 8
lfe-1.4-771/lfe/tests/nonest.Rout.save | 16
lfe-1.4-771/lfe/tests/onefac.Rout.save | 8
lfe-1.4-771/lfe/tests/verify.Rout.save | 10
28 files changed, 860 insertions(+), 1054 deletions(-)
Title: Joint Optimization Plot
Diff between JOP versions 3.3 dated 2012-11-15 and 3.4 dated 2013-01-16
Description: JOP is a tool for simultaneous optimization of multiple
responses and visualization of the results. The visualization
is done by the joint optimization plot introduced by Kuhnt and
Erdbruegge (2004).
Author: Sonja Kuhnt and Nikolaus Rudak
Maintainer: Nikolaus Rudak
DESCRIPTION | 9 +++++----
MD5 | 18 +++++++++---------
R/JOP.R | 50 ++++++++++++++++++++++++++++++--------------------
R/locate.R | 22 +++++++++++-----------
R/plot.JOP.R | 21 ++++++++++-----------
man/JOP.Rd | 37 +++++++++++++++++++------------------
man/datax.rd | 4 ++++
man/datay.rd | 4 ++++
man/locate.rd | 17 +++++++++--------
man/plot.JOP.rd | 17 ++++++++---------
10 files changed, 109 insertions(+), 90 deletions(-)
Title: Spatial and Space-Time Point Pattern Analysis
Diff between splancs versions 2.01-31 dated 2012-01-22 and 2.01-32 dated 2013-01-16
Description: Spatial and Space-Time Point Pattern Analysis Functions
Author: Barry Rowlingson
Maintainer: Roger Bivand
ChangeLog | 13 +++++++++++++
DESCRIPTION | 8 ++++----
MD5 | 8 ++++----
R/First.lib.S | 3 ++-
inst/ChangeLog | 13 +++++++++++++
5 files changed, 36 insertions(+), 9 deletions(-)
Title: Spatial and Phylogenetic Analysis of Community Diversity
Diff between spacodiR versions 0.12.0108 dated 2012-01-10 and 0.13.0115 dated 2013-01-16
Description: SPACoDi is primarily designed to characterise the
structure and phylogenetic diversity of communities using
abundance or presence-absence data of species among community
plots.
Author: Jonathan Eastman, Timothy Paine, and Olivier Hardy
Maintainer: Jonathan Eastman
ChangeLog | 4 ++
DESCRIPTION | 8 ++---
MD5 | 10 +++---
R/dataResampling.R | 84 ++++++++++++++++++++++++++++++++++-------------------
man/resamp.2x.Rd | 4 +-
man/resamp.3x.Rd | 2 -
6 files changed, 71 insertions(+), 41 deletions(-)
Title: Interface to Geometry Engine - Open Source (GEOS)
Diff between rgeos versions 0.2-11 dated 2012-12-18 and 0.2-12 dated 2013-01-16
Description: Interface to Geometry Engine - Open Source (GEOS) using
the C API for topology operations on geometries. The GEOS
library is external to the package, and, when installing the
package from source, must be correctly installed first. Windows
and Mac Intel OS X binaries are provided on CRAN.
Author: Roger Bivand [cre, aut], Colin Rundel [aut], Edzer Pebesma
[ctb], Karl Ove Hufthammer [ctb]
Maintainer: Roger Bivand
ChangeLog | 8 ++++++++
DESCRIPTION | 8 ++++----
MD5 | 10 +++++-----
R/AAA.R | 6 +++++-
inst/ChangeLog | 8 ++++++++
inst/SVN_VERSION | 2 +-
6 files changed, 31 insertions(+), 11 deletions(-)
Title: Examples using Rcpp to interface R and C++
Diff between RcppExamples versions 0.1.5 dated 2012-12-28 and 0.1.6 dated 2013-01-16
Description: Examples for Seamless R and C++ integration The Rcpp
package contains a C++ library that facilitates the integration
of R and C++ in various ways. This package provides some usage
examples.
Note that the documentation in this package currently does not cover
all the features in the package. It is not even close. On the
other hand, the site http://gallery.rcpp.org is regrouping a
number of examples for Rcpp.
Author: Dirk Eddelbuettel and Romain Francois
Maintainer: Dirk Eddelbuettel
RcppExamples-0.1.5/RcppExamples/NEWS.Rd |only
RcppExamples-0.1.6/RcppExamples/ChangeLog | 9 +++++++++
RcppExamples-0.1.6/RcppExamples/DESCRIPTION | 12 +++++++-----
RcppExamples-0.1.6/RcppExamples/MD5 | 8 ++++----
RcppExamples-0.1.6/RcppExamples/inst |only
RcppExamples-0.1.6/RcppExamples/man/RcppExamples-package.Rd | 3 +++
6 files changed, 23 insertions(+), 9 deletions(-)
Title: Tools for reading and handling spatial objects
Diff between maptools versions 0.8-21 dated 2012-12-21 and 0.8-22 dated 2013-01-16
Description: Set of tools for manipulating and reading geographic data,
in particular ESRI shapefiles; C code used from shapelib. It
includes binary access to GSHHS shoreline files. The package
also provides interface wrappers for exchanging spatial objects
with packages such as PBSmapping, spatstat, maps, RArcInfo,
Stata tmap, WinBUGS, Mondrian, and others.
Author: Nicholas J. Lewin-Koh and Roger Bivand, contributions by Edzer
J. Pebesma, Eric Archer, Adrian Baddeley, Hans-Jörg Bibiko,
Jonathan Callahan, German Carrillo, Stéphane Dray, David
Forrest, Michael Friendly, Patrick Giraudoux, Duncan Golicher,
Virgilio Gómez Rubio, Patrick Hausmann, Karl Ove Hufthammer,
Thomas Jagger, Sebastian P. Luque, Don MacQueen, Andrew
Niccolai, Oscar Perpiñán Lamigueiro, Tom Short, Greg Snow, Ben
Stabler and Rolf Turner
Maintainer: Roger Bivand
ChangeLog | 12 ++++++++++++
DESCRIPTION | 8 ++++----
MD5 | 12 ++++++------
R/AAA.R | 3 +++
inst/ChangeLog | 12 ++++++++++++
man/lineLabel.Rd | 12 +++++++-----
maptools-Ex.R | 2 +-
7 files changed, 45 insertions(+), 16 deletions(-)
Title: Calculate AUC-type measure when gold standard is continuous and
the corresponding optimal linear combination of variables with
respect to it.
Diff between cgAUC versions 1.0 dated 2012-12-22 and 1.1.2 dated 2013-01-16
Description: The cgAUC can calculate the AUC-type measure of
Obuchowski(2006) when gold standard is continuous, and find the
optimal linear combination of variables with respect to this
measure.
Author: Yuan-chin I. Chang, Yu-chia Chang, and Ling-wan Chen
Maintainer: Yu-chia Chang
DESCRIPTION | 8 ++++----
MD5 | 18 +++++++++---------
R/cgAUC.r | 39 +++++++++++++++++++++++----------------
man/cgAUC-package.Rd | 14 +++++++-------
man/cgAUC.Rd | 14 ++++++++------
man/cntin.Rd | 4 ++--
man/d.theta.sh.h.p.Rd | 4 ++--
man/dscrt.Rd | 4 ++--
man/optimal.delta.Rd | 4 ++--
man/s.h.Rd | 4 ++--
10 files changed, 61 insertions(+), 52 deletions(-)
Title: A multi-OS implementation of the TAMU SWAT model.
Diff between SWATmodel versions 0.5.6 dated 2013-01-14 and 0.5.7 dated 2013-01-16
Description: The Soil and Water Assessment Tool is a river basin or
watershed scale model developed by Dr. Jeff Arnold for the
USDA-ARS.
Author: Fuka, DR, Walter, MT, Steenhuis, TS, and Easton, ZM
Maintainer: Daniel Fuka
DESCRIPTION | 6 +++---
MD5 | 8 ++++----
R/runSWAT2005.R | 2 +-
R/runSWAT2009.R | 2 +-
man/SWATmodel-package.Rd | 2 +-
5 files changed, 10 insertions(+), 10 deletions(-)
Title: Running MLwiN from within R
Diff between R2MLwiN versions 0.1-2 dated 2012-12-06 and 0.1-3 dated 2013-01-16
Description: R2MLwiN is an R command interface to the MLwiN multilevel
modelling software package, allowing users to fit multilevel
models using MLwiN from within the R environment.
Author: Zhengzheng Zhang, Chris Charlton, Richard Parker, George
Leckie, William Browne
Maintainer: Zhengzheng Zhang
DESCRIPTION | 15 +++++----
MD5 | 14 ++++----
NEWS | 7 ++++
R/Formula.translate.R | 58 +++++++++++++++++++++---------------
R/MacroScript1.R | 78 ++++++++++++++++++++++++++++++++-----------------
R/MacroScript2.R | 78 ++++++++++++++++++++++++++++++++-----------------
R/sixway.R | 4 +-
man/R2MLwiN-package.Rd | 4 +-
8 files changed, 165 insertions(+), 93 deletions(-)
Title: A community modeling foundation for Eco-Hydrology.
Diff between EcoHydRology versions 0.4.6 dated 2013-01-14 and 0.4.7 dated 2013-01-16
Description: This package provides a flexible foundation for
scientists, engineers, and policy makers to base teaching
exercises as well as for more applied use to model complex
eco-hydrological interactions.
Author: Fuka DR, Walter MT, Archibald JA, Steenhuis TS, and Easton ZM
Maintainer: Daniel Fuka
DESCRIPTION | 6 +++---
MD5 | 14 +++++++-------
R/SWAT2005.R | 2 +-
R/calib_swat_ex.R | 1 +
R/swat_objective_function.R | 4 ++--
R/swat_objective_function_rch.R | 4 ++--
R/testSWAT2005.R | 3 +--
man/EcoHydRology-package.Rd | 2 +-
8 files changed, 18 insertions(+), 18 deletions(-)