Title: Diagnostic tools for hierarchical (multilevel) linear models
Diff between HLMdiag versions 0.1.6 dated 2012-09-01 and 0.2.0 dated 2013-02-18
Description: A suite of diagnostic tools for hierarchical (multilevel)
linear models. The package offers not only leverage and
traditional deletion diagnostics (Cook's distance, covratio,
covtrace, and MDFFITS) but also provides convenience functions
and graphics for residual analysis. The package assumes that
models were fit using the lme4 package.
Author: Adam Loy
Maintainer: Adam Loy
HLMdiag-0.1.6/HLMdiag/R/parse_formula.R |only
HLMdiag-0.1.6/HLMdiag/man/ggplot_ppnorm.Rd |only
HLMdiag-0.1.6/HLMdiag/man/ppnormBand.Rd |only
HLMdiag-0.2.0/HLMdiag/DESCRIPTION | 33 -
HLMdiag-0.2.0/HLMdiag/MD5 | 67 +--
HLMdiag-0.2.0/HLMdiag/NAMESPACE | 62 +-
HLMdiag-0.2.0/HLMdiag/NEWS | 48 +-
HLMdiag-0.2.0/HLMdiag/R/HLMresid.R | 220 ++++++----
HLMdiag-0.2.0/HLMdiag/R/LSresids.R | 174 ++++---
HLMdiag-0.2.0/HLMdiag/R/adjust_formula_lmList.R | 85 ++-
HLMdiag-0.2.0/HLMdiag/R/case_delete.R | 327 +++++++++------
HLMdiag-0.2.0/HLMdiag/R/diagnostic_functions.R | 284 ++++++++-----
HLMdiag-0.2.0/HLMdiag/R/group_level_residual_functions.R | 38 +
HLMdiag-0.2.0/HLMdiag/R/help.R |only
HLMdiag-0.2.0/HLMdiag/R/identification.R | 19
HLMdiag-0.2.0/HLMdiag/R/influence_functions.R |only
HLMdiag-0.2.0/HLMdiag/R/plot_functions.R | 261 +++++++++--
HLMdiag-0.2.0/HLMdiag/R/quantile_functions.R | 151 ++----
HLMdiag-0.2.0/HLMdiag/R/utility_functions.R |only
HLMdiag-0.2.0/HLMdiag/README.md |only
HLMdiag-0.2.0/HLMdiag/man/HLMdiag.Rd |only
HLMdiag-0.2.0/HLMdiag/man/HLMresid.Rd | 140 +++++-
HLMdiag-0.2.0/HLMdiag/man/LSresids.Rd | 59 +-
HLMdiag-0.2.0/HLMdiag/man/adjust_lmList-class.Rd | 17
HLMdiag-0.2.0/HLMdiag/man/adjust_lmList.Rd | 42 +
HLMdiag-0.2.0/HLMdiag/man/case_delete.Rd | 96 ++--
HLMdiag-0.2.0/HLMdiag/man/compare_eb_ls.Rd | 17
HLMdiag-0.2.0/HLMdiag/man/cooks.distance.mer.Rd |only
HLMdiag-0.2.0/HLMdiag/man/covratio.mer.Rd |only
HLMdiag-0.2.0/HLMdiag/man/diagnostics.Rd | 110 ++---
HLMdiag-0.2.0/HLMdiag/man/dotplot_diag.Rd | 70 ++-
HLMdiag-0.2.0/HLMdiag/man/ggplot_qqnorm.Rd | 11
HLMdiag-0.2.0/HLMdiag/man/group_qqnorm.Rd | 22 -
HLMdiag-0.2.0/HLMdiag/man/leverage.mer.Rd |only
HLMdiag-0.2.0/HLMdiag/man/rvc.mer.Rd |only
HLMdiag-0.2.0/HLMdiag/man/varcomp.mer.Rd |only
HLMdiag-0.2.0/HLMdiag/man/wages.Rd | 74 +--
HLMdiag-0.2.0/HLMdiag/src |only
38 files changed, 1513 insertions(+), 914 deletions(-)
Title: Big Random Forests: Classification and Regression Forests for
Large Data Sets
Diff between bigrf versions 0.1-1 dated 2013-02-15 and 0.1-3 dated 2013-02-18
Description: This is an implementation of Leo Breiman's and Adele
Cutler's Random Forest algorithms for classification and
regression, with optimizations for performance and for handling
of data sets that are too large to be processed in memory.
Forests can be built in parallel at two levels. First, trees
can be grown in parallel on a single machine using foreach.
Second, multiple forests can be built in parallel on multiple
machines, then merged into one. For large data sets, disk-based
big.matrix's may be used for storing data and intermediate
computations, to prevent excessive virtual memory swapping by
the operating system. Currently, only classification forests
with a subset of the functionality in Breiman and Cutler's
original code are implemented. More functionality and
regression trees will be added in the future. See file
INSTALL-WINDOWS in the source package for Windows installation
instructions.
Author: Aloysius Lim, Leo Breiman, Adele Cutler
Maintainer: Aloysius Lim
DESCRIPTION | 18 +++++++++++-------
INSTALL-WINDOWS |only
MD5 | 32 +++++++++++++++++---------------
NEWS |only
README.md | 6 +++---
man/bigrf-package.Rd | 19 ++++++++++---------
man/bigrfc.Rd | 2 +-
man/fastimp-methods.Rd | 2 +-
man/generateSyntheticClass.Rd | 3 ++-
man/grow-methods.Rd | 2 +-
man/interactions-methods.Rd | 2 +-
man/merge-methods.Rd | 4 ++--
man/outliers-methods.Rd | 4 ++--
man/predict-methods.Rd | 4 ++--
man/prototypes-methods.Rd | 4 ++--
man/proximities-methods.Rd | 4 ++--
man/scaling-methods.Rd | 4 ++--
man/varimp-methods.Rd | 2 +-
18 files changed, 60 insertions(+), 52 deletions(-)
Title: An examination of indices for determining the number of clusters
: NbClust Package
Diff between NbClust versions 1.2 dated 2012-06-29 and 1.3 dated 2013-02-18
Description: This package provides most of the popular indices for
cluster validation ready to use for the outputs produced by
functions coming from the same package. It also proposes to
user the best clustering scheme from the different results
obtained by varying all combinations of number of clusters,
distance measures, and clustering methods.
Author: Malika Charrad
Maintainer: Malika Charrad
DESCRIPTION | 9 +++++----
MD5 | 6 +++---
R/NbClust.R | 11 ++++++-----
man/NbClust.Rd | 25 ++++++++++++++++++++++++-
4 files changed, 38 insertions(+), 13 deletions(-)
Title: Elastic Functional Data Analysis
Diff between fdasrvf versions 1.3 dated 2012-12-26 and 1.4 dated 2013-02-18
Description: A library for functional data analysis using the square
root velocity framework
Author: J. Derek Tucker
Maintainer: J. Derek Tucker
DESCRIPTION | 9 ++++----
MD5 | 42 +++++++++++++++++++-------------------
NEWS | 8 ++++++-
R/SqrtMean.R | 2 -
R/align_fPCA.R | 25 ++++++++++------------
R/gauss_model.R | 4 +--
R/horizFPCA.R | 2 -
R/outlier.detection.R | 2 -
R/rgam.R | 37 ++++++++++++++++++---------------
R/smooth.data.R | 2 -
R/time_warping.R | 27 +++++++++++-------------
R/vertFPCA.R | 4 +--
README.md | 2 -
man/SqrtMean.Rd | 4 +--
man/align_fPCA.Rd | 26 ++++++++++++-----------
man/gauss_model.Rd | 4 +--
man/horizFPCA.Rd | 4 +--
man/outlier.detection.Rd | 2 -
man/smooth.data.Rd | 2 -
man/time_warping.Rd | 23 +++++++++++----------
man/vertFPCA.Rd | 4 +--
src/DynamicProgrammingQ2.c | 49 ++++++++++++++-------------------------------
22 files changed, 138 insertions(+), 146 deletions(-)
Title: Bayesian quantile regression
Diff between bayesQR versions 2.0 dated 2013-01-04 and 2.1 dated 2013-02-18
Description: Bayesian quantile regression using the asymmetric Laplace
distribution, both continuous as well as binary dependent
variables are supported. The package consists of
implementations of the methods of Yu & Moyeed (2001), Benoit &
Van den Poel (2012) and Al-Hamzawi, Yu & Benoit (2012). To
speed up the calculations, the Markov Chain Monte Carlo core of
all algorithms is programmed in Fortran and called from R.
Author: Dries F. Benoit, Rahim Al-Hamzawi, Keming Yu, Dirk Van den Poel
Maintainer: Dries F. Benoit
bayesQR-2.0/bayesQR/R/QRb.AL.r |only
bayesQR-2.0/bayesQR/R/QRb.pred.r |only
bayesQR-2.0/bayesQR/R/QRb.r |only
bayesQR-2.0/bayesQR/R/QRc.AL.r |only
bayesQR-2.0/bayesQR/R/QRc.r |only
bayesQR-2.0/bayesQR/R/QRplot.r |only
bayesQR-2.0/bayesQR/R/QRseq.r |only
bayesQR-2.0/bayesQR/R/QRsummary.r |only
bayesQR-2.0/bayesQR/man/QRb.AL.Rd |only
bayesQR-2.0/bayesQR/man/QRb.Rd |only
bayesQR-2.0/bayesQR/man/QRb.pred.Rd |only
bayesQR-2.0/bayesQR/man/QRc.AL.Rd |only
bayesQR-2.0/bayesQR/man/QRc.Rd |only
bayesQR-2.0/bayesQR/man/QRplot.Rd |only
bayesQR-2.0/bayesQR/man/QRseq.Rd |only
bayesQR-2.0/bayesQR/man/QRsummary.Rd |only
bayesQR-2.1/bayesQR/DESCRIPTION | 9 ++---
bayesQR-2.1/bayesQR/MD5 | 42 +++++++++++--------------
bayesQR-2.1/bayesQR/NAMESPACE | 11 +++++-
bayesQR-2.1/bayesQR/R/bayesQR.r |only
bayesQR-2.1/bayesQR/R/bayesQR.single.r |only
bayesQR-2.1/bayesQR/R/plot.bayesQR.r |only
bayesQR-2.1/bayesQR/R/predict.bayesQR.r |only
bayesQR-2.1/bayesQR/R/print.bayesQR.summary.r |only
bayesQR-2.1/bayesQR/R/prior.r |only
bayesQR-2.1/bayesQR/R/summary.bayesQR.r |only
bayesQR-2.1/bayesQR/R/summary.bayesQR.single.r |only
bayesQR-2.1/bayesQR/man/bayesQR.Rd |only
bayesQR-2.1/bayesQR/man/plot.bayesQR.Rd |only
bayesQR-2.1/bayesQR/man/predict.bayesQR.Rd |only
bayesQR-2.1/bayesQR/man/print.bayesQR.Rd |only
bayesQR-2.1/bayesQR/man/prior.Rd |only
bayesQR-2.1/bayesQR/man/summary.bayesQR.Rd |only
bayesQR-2.1/bayesQR/src/QRb_AL_mcmc.f95 | 2 +
bayesQR-2.1/bayesQR/src/QRb_mcmc.f95 | 1
bayesQR-2.1/bayesQR/src/QRc_AL_mcmc.f95 | 4 ++
bayesQR-2.1/bayesQR/src/QRc_mcmc.f95 | 11 ++----
37 files changed, 46 insertions(+), 34 deletions(-)
Title: Generalized multistate simulation model
Diff between gems versions 0.9 dated 2013-02-01 and 0.9.1 dated 2013-02-18
Description: This package allows to simulating and analyzing multistate
models with general hazard functions. It provides functionality
for the preparation of hazard functions and parameters,
simulation from a general multistate model and predicting
future events. The multistate model is not required to be a
Markov model and may take the history of previous events into
account. In the basic version, it allows to simulate from
transition-specific hazard function, whose parameters are
multivariable normally distributed.
Author: Luisa Salazar Vizcaya, Nello Blaser, Thomas Gsponer
Maintainer: Luisa Salazar Vizcaya
DESCRIPTION | 7
MD5 | 10 -
R/gems.r | 372 ++++++++++++++++-------------------------
changeLog | 5
man/cumulativeIncidence.Rd | 5
man/transitionProbabilities.Rd | 5
6 files changed, 170 insertions(+), 234 deletions(-)
Title: Routines for fitting kinetic models with one or more state
variables to chemical degradation data
Diff between mkin versions 0.9-10 dated 2013-02-17 and 0.9-12 dated 2013-02-18
Description: Calculation routines based on the FOCUS Kinetics Report
(2006). Includes a function for conveniently defining
differential equation models, model solution based on
eigenvalues if possible or using numerical solvers and a choice
of the optimisation methods made available by the FME package
(default is a Levenberg-Marquardt variant). Please note that
no warranty is implied for correctness of results or fitness
for a particular purpose.
Author: Johannes Ranke, Katrin Lindenberger, René Lehmann
Maintainer: Johannes Ranke
mkin-0.9-10/mkin/mkin-Ex.R |only
mkin-0.9-10/mkin/vignettes/examples.bbl |only
mkin-0.9-10/mkin/vignettes/examples.blg |only
mkin-0.9-12/mkin/DESCRIPTION | 8 ++--
mkin-0.9-12/mkin/MD5 | 27 +++++++---------
mkin-0.9-12/mkin/R/mkin_wide_to_long.R | 6 +--
mkin-0.9-12/mkin/R/mkinerrmin.R | 6 +--
mkin-0.9-12/mkin/R/mkinfit.R | 5 +--
mkin-0.9-12/mkin/R/mkinresplot.R | 3 +
mkin-0.9-12/mkin/R/plot.mkinfit.R | 26 +++++++++++++++-
mkin-0.9-12/mkin/R/transform_odeparms.R | 20 ++++++++++++
mkin-0.9-12/mkin/inst/doc/examples.Rnw | 52 +++++++++++++++++++++++++++++---
mkin-0.9-12/mkin/inst/doc/examples.pdf |binary
mkin-0.9-12/mkin/inst/doc/mkin.pdf |binary
mkin-0.9-12/mkin/man/plot.mkinfit.Rd | 3 +
mkin-0.9-12/mkin/vignettes/examples.Rnw | 52 +++++++++++++++++++++++++++++---
16 files changed, 170 insertions(+), 38 deletions(-)
Title: bild: a package for BInary Longitudinal Data
Diff between bild versions 1.1-1 dated 2012-09-22 and 1.1-3 dated 2013-02-18
Description: bild performs logistic regression for binary longitudinal
data, allowing for serial dependence among observations from a
given individual and a random intercept term. Estimation is via
maximization of the exact likelihood of a suitably defined
model. Missing values and unbalanced data are allowed, with
some restrictions.
Author: M. Helena Gonçalves, M. Salomé Cabral and Adelchi Azzalini,
apart from a set of Fortran-77 subroutines written by R.
Piessens and E. de Doncker, belonging to the suite "Quadpack"
Maintainer: M. Helena Gonçalves
bild-1.1-1/bild/R/zzz.R |only
bild-1.1-3/bild/DESCRIPTION | 9 ++++----
bild-1.1-3/bild/MD5 | 9 +++-----
bild-1.1-3/bild/NAMESPACE | 1
bild-1.1-3/bild/R/bild.R | 48 +++++++++++++++++++++++++++++++++++++++++---
bild-1.1-3/bild/history.txt | 8 +++++++
6 files changed, 63 insertions(+), 12 deletions(-)
Title: Spatial Probit Models
Diff between spatialprobit versions 0.9-6 dated 2013-02-15 and 0.9-7 dated 2013-02-18
Description: Bayesian Estimation of Spatial Probit and Tobit Models
Author: Stefan Wilhelm
Maintainer: Stefan Wilhelm
DESCRIPTION | 8 ++++----
MD5 | 12 ++++++------
NEWS | 3 +++
R/LeSagePaceExperiment.R | 2 +-
R/SpatialProbit-MCMC.R | 4 ++--
R/sartobit.R | 4 ++--
R/semprobit.R | 2 +-
7 files changed, 19 insertions(+), 16 deletions(-)
Title: Diverse basic statistical and graphical functions
Diff between RVAideMemoire versions 0.9-11 dated 2012-07-30 and 0.9-22 dated 2013-02-18
Description: This package contains diverse more or less complicated
functions, written to simplify beginners' (but not only) life:
simplifications of existing functions, basic but not
implemented tests, easy-to-use tools... All functions are
presented in the French book 'Aide-memoire de statistique
appliquee a la biologie', written by the same author and
available on CRAN.
Author: Maxime Hervé
Maintainer: Maxime Hervé
RVAideMemoire-0.9-11/RVAideMemoire/R/perm.anova.1way.R |only
RVAideMemoire-0.9-11/RVAideMemoire/R/perm.anova.2wayA.R |only
RVAideMemoire-0.9-11/RVAideMemoire/R/perm.anova.2wayB.R |only
RVAideMemoire-0.9-11/RVAideMemoire/R/perm.anova.2wayC.R |only
RVAideMemoire-0.9-11/RVAideMemoire/R/perm.anova.2wayD.R |only
RVAideMemoire-0.9-11/RVAideMemoire/R/perm.anova.3wayA.R |only
RVAideMemoire-0.9-11/RVAideMemoire/R/perm.anova.3wayB.R |only
RVAideMemoire-0.9-11/RVAideMemoire/R/print.G.multcomp.R |only
RVAideMemoire-0.9-11/RVAideMemoire/R/print.G.test.R |only
RVAideMemoire-0.9-11/RVAideMemoire/R/print.G.theo.multcomp.R |only
RVAideMemoire-0.9-11/RVAideMemoire/R/print.adjust.esticon.R |only
RVAideMemoire-0.9-11/RVAideMemoire/R/print.bootstrap.R |only
RVAideMemoire-0.9-11/RVAideMemoire/R/print.byf.shapiro.R |only
RVAideMemoire-0.9-11/RVAideMemoire/R/print.chisq.bintest.R |only
RVAideMemoire-0.9-11/RVAideMemoire/R/print.chisq.exp.R |only
RVAideMemoire-0.9-11/RVAideMemoire/R/print.chisq.multcomp.R |only
RVAideMemoire-0.9-11/RVAideMemoire/R/print.chisq.theo.multcomp.R |only
RVAideMemoire-0.9-11/RVAideMemoire/R/print.cochran.qtest.R |only
RVAideMemoire-0.9-11/RVAideMemoire/R/print.cor.2comp.R |only
RVAideMemoire-0.9-11/RVAideMemoire/R/print.cor.conf.R |only
RVAideMemoire-0.9-11/RVAideMemoire/R/print.cor.multcomp.R |only
RVAideMemoire-0.9-11/RVAideMemoire/R/print.cramer.coeff.R |only
RVAideMemoire-0.9-11/RVAideMemoire/R/print.fisher.multcomp.R |only
RVAideMemoire-0.9-11/RVAideMemoire/R/print.ind.contrib.R |only
RVAideMemoire-0.9-11/RVAideMemoire/R/print.least.rect.R |only
RVAideMemoire-0.9-11/RVAideMemoire/R/print.lr.multcomp.R |only
RVAideMemoire-0.9-11/RVAideMemoire/R/print.pairwise.G.test.R |only
RVAideMemoire-0.9-11/RVAideMemoire/R/print.perm.anova.R |only
RVAideMemoire-0.9-11/RVAideMemoire/R/print.perm.bartlett.test.R |only
RVAideMemoire-0.9-11/RVAideMemoire/R/print.perm.cor.test.R |only
RVAideMemoire-0.9-11/RVAideMemoire/R/print.perm.t.test.R |only
RVAideMemoire-0.9-11/RVAideMemoire/R/print.perm.var.test.R |only
RVAideMemoire-0.9-11/RVAideMemoire/R/print.plotsurvivors.R |only
RVAideMemoire-0.9-11/RVAideMemoire/R/print.prop.multcomp.R |only
RVAideMemoire-0.9-11/RVAideMemoire/R/print.reg.intcomp.R |only
RVAideMemoire-0.9-11/RVAideMemoire/R/print.reg.slpcomp.R |only
RVAideMemoire-0.9-11/RVAideMemoire/R/print.spearman.ci.R |only
RVAideMemoire-0.9-11/RVAideMemoire/R/print.surv.multcomp.R |only
RVAideMemoire-0.9-11/RVAideMemoire/R/print.wilcox.paired.multcomp.R |only
RVAideMemoire-0.9-11/RVAideMemoire/R/print.wilcox.signtest.R |only
RVAideMemoire-0.9-11/RVAideMemoire/man/ci.Rd |only
RVAideMemoire-0.9-11/RVAideMemoire/man/print.bootstrap.Rd |only
RVAideMemoire-0.9-11/RVAideMemoire/man/psignif.Rd |only
RVAideMemoire-0.9-22/RVAideMemoire/DESCRIPTION | 11
RVAideMemoire-0.9-22/RVAideMemoire/MD5 | 243 +++-----
RVAideMemoire-0.9-22/RVAideMemoire/NAMESPACE | 9
RVAideMemoire-0.9-22/RVAideMemoire/R/DA.valid.R |only
RVAideMemoire-0.9-22/RVAideMemoire/R/DA.var.R |only
RVAideMemoire-0.9-22/RVAideMemoire/R/G.multcomp.R | 4
RVAideMemoire-0.9-22/RVAideMemoire/R/G.test.R | 5
RVAideMemoire-0.9-22/RVAideMemoire/R/G.theo.multcomp.R | 8
RVAideMemoire-0.9-22/RVAideMemoire/R/LDA.format.R |only
RVAideMemoire-0.9-22/RVAideMemoire/R/adjust.esticon.R | 11
RVAideMemoire-0.9-22/RVAideMemoire/R/ancova.multcomp.R | 14
RVAideMemoire-0.9-22/RVAideMemoire/R/bootstrap.R | 11
RVAideMemoire-0.9-22/RVAideMemoire/R/byf.hist.R | 20
RVAideMemoire-0.9-22/RVAideMemoire/R/byf.mqqnorm.R |only
RVAideMemoire-0.9-22/RVAideMemoire/R/byf.normhist.R |only
RVAideMemoire-0.9-22/RVAideMemoire/R/byf.qqnorm.R | 20
RVAideMemoire-0.9-22/RVAideMemoire/R/byf.shapiro.R | 25
RVAideMemoire-0.9-22/RVAideMemoire/R/chisq.bintest.R | 49 -
RVAideMemoire-0.9-22/RVAideMemoire/R/chisq.exp.R | 13
RVAideMemoire-0.9-22/RVAideMemoire/R/chisq.multcomp.R | 4
RVAideMemoire-0.9-22/RVAideMemoire/R/chisq.theo.multcomp.R | 8
RVAideMemoire-0.9-22/RVAideMemoire/R/ci.R | 2
RVAideMemoire-0.9-22/RVAideMemoire/R/cochran.qtest.R | 47 -
RVAideMemoire-0.9-22/RVAideMemoire/R/cor.2comp.R | 26
RVAideMemoire-0.9-22/RVAideMemoire/R/cor.conf.R | 16
RVAideMemoire-0.9-22/RVAideMemoire/R/cor.multcomp.R | 35 -
RVAideMemoire-0.9-22/RVAideMemoire/R/cox.resid.R | 2
RVAideMemoire-0.9-22/RVAideMemoire/R/cramer.coeff.R | 15
RVAideMemoire-0.9-22/RVAideMemoire/R/dendro.gp.R |only
RVAideMemoire-0.9-22/RVAideMemoire/R/fisher.multcomp.R | 5
RVAideMemoire-0.9-22/RVAideMemoire/R/ind.contrib.R | 19
RVAideMemoire-0.9-22/RVAideMemoire/R/least.rect.R | 43 -
RVAideMemoire-0.9-22/RVAideMemoire/R/lr.multcomp.R | 43 -
RVAideMemoire-0.9-22/RVAideMemoire/R/mat.cont.R | 5
RVAideMemoire-0.9-22/RVAideMemoire/R/mqqnorm.R | 8
RVAideMemoire-0.9-22/RVAideMemoire/R/pairwise.G.test.R | 4
RVAideMemoire-0.9-22/RVAideMemoire/R/pairwise.manova.R |only
RVAideMemoire-0.9-22/RVAideMemoire/R/pairwise.perm.t.test.R | 15
RVAideMemoire-0.9-22/RVAideMemoire/R/perm.anova.R | 291 ++++++++--
RVAideMemoire-0.9-22/RVAideMemoire/R/perm.bartlett.test.R | 26
RVAideMemoire-0.9-22/RVAideMemoire/R/perm.cor.test.R | 15
RVAideMemoire-0.9-22/RVAideMemoire/R/perm.t.test.R | 41 -
RVAideMemoire-0.9-22/RVAideMemoire/R/perm.var.test.R | 36 -
RVAideMemoire-0.9-22/RVAideMemoire/R/plot1comp.ind.R |only
RVAideMemoire-0.9-22/RVAideMemoire/R/plot1comp.var.R |only
RVAideMemoire-0.9-22/RVAideMemoire/R/plotresid.R | 4
RVAideMemoire-0.9-22/RVAideMemoire/R/plotsurvivors.R | 4
RVAideMemoire-0.9-22/RVAideMemoire/R/print.RV.multcomp.R |only
RVAideMemoire-0.9-22/RVAideMemoire/R/print.RVtest.R |only
RVAideMemoire-0.9-22/RVAideMemoire/R/prop.multcomp.R | 8
RVAideMemoire-0.9-22/RVAideMemoire/R/psignif.R | 2
RVAideMemoire-0.9-22/RVAideMemoire/R/reg.ci.R | 1
RVAideMemoire-0.9-22/RVAideMemoire/R/reg.intcomp.R | 47 +
RVAideMemoire-0.9-22/RVAideMemoire/R/reg.slpcomp.R | 41 -
RVAideMemoire-0.9-22/RVAideMemoire/R/spearman.ci.R | 13
RVAideMemoire-0.9-22/RVAideMemoire/R/surv.multcomp.R | 92 +--
RVAideMemoire-0.9-22/RVAideMemoire/R/wilcox.paired.multcomp.R | 35 -
RVAideMemoire-0.9-22/RVAideMemoire/R/wilcox.signtest.R | 48 -
RVAideMemoire-0.9-22/RVAideMemoire/R/zzz.R | 2
RVAideMemoire-0.9-22/RVAideMemoire/RVAideMemoire-Ex.R | 230 ++++++-
RVAideMemoire-0.9-22/RVAideMemoire/man/DA.valid.Rd |only
RVAideMemoire-0.9-22/RVAideMemoire/man/DA.var.Rd |only
RVAideMemoire-0.9-22/RVAideMemoire/man/G.multcomp.Rd | 2
RVAideMemoire-0.9-22/RVAideMemoire/man/G.test.Rd | 6
RVAideMemoire-0.9-22/RVAideMemoire/man/G.theo.multcomp.Rd | 6
RVAideMemoire-0.9-22/RVAideMemoire/man/LDA.format.Rd |only
RVAideMemoire-0.9-22/RVAideMemoire/man/RVAideMemoire-package.Rd | 4
RVAideMemoire-0.9-22/RVAideMemoire/man/adjust.esticon.Rd | 6
RVAideMemoire-0.9-22/RVAideMemoire/man/bootstrap.Rd | 5
RVAideMemoire-0.9-22/RVAideMemoire/man/byf.hist.Rd | 12
RVAideMemoire-0.9-22/RVAideMemoire/man/byf.mqqnorm.Rd |only
RVAideMemoire-0.9-22/RVAideMemoire/man/byf.normhist.Rd |only
RVAideMemoire-0.9-22/RVAideMemoire/man/byf.qqnorm.Rd | 17
RVAideMemoire-0.9-22/RVAideMemoire/man/byf.shapiro.Rd | 12
RVAideMemoire-0.9-22/RVAideMemoire/man/chisq.bintest.Rd | 14
RVAideMemoire-0.9-22/RVAideMemoire/man/chisq.exp.Rd | 1
RVAideMemoire-0.9-22/RVAideMemoire/man/chisq.multcomp.Rd | 2
RVAideMemoire-0.9-22/RVAideMemoire/man/chisq.theo.multcomp.Rd | 6
RVAideMemoire-0.9-22/RVAideMemoire/man/cochran.qtest.Rd | 15
RVAideMemoire-0.9-22/RVAideMemoire/man/cor.2comp.Rd | 20
RVAideMemoire-0.9-22/RVAideMemoire/man/cor.conf.Rd | 10
RVAideMemoire-0.9-22/RVAideMemoire/man/cor.multcomp.Rd | 24
RVAideMemoire-0.9-22/RVAideMemoire/man/cox.resid.Rd | 3
RVAideMemoire-0.9-22/RVAideMemoire/man/cramer.coeff.Rd | 5
RVAideMemoire-0.9-22/RVAideMemoire/man/dendro.gp.Rd |only
RVAideMemoire-0.9-22/RVAideMemoire/man/fisher.multcomp.Rd | 2
RVAideMemoire-0.9-22/RVAideMemoire/man/ind.contrib.Rd | 1
RVAideMemoire-0.9-22/RVAideMemoire/man/least.rect.Rd | 3
RVAideMemoire-0.9-22/RVAideMemoire/man/lr.multcomp.Rd | 3
RVAideMemoire-0.9-22/RVAideMemoire/man/mqqnorm.Rd | 7
RVAideMemoire-0.9-22/RVAideMemoire/man/pairwise.G.test.Rd | 2
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RVAideMemoire-0.9-22/RVAideMemoire/man/perm.bartlett.test.Rd | 5
RVAideMemoire-0.9-22/RVAideMemoire/man/perm.cor.test.Rd | 6
RVAideMemoire-0.9-22/RVAideMemoire/man/perm.t.test.Rd | 4
RVAideMemoire-0.9-22/RVAideMemoire/man/perm.var.test.Rd | 5
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RVAideMemoire-0.9-22/RVAideMemoire/man/plotresid.Rd | 2
RVAideMemoire-0.9-22/RVAideMemoire/man/plotsurvivors.Rd | 3
RVAideMemoire-0.9-22/RVAideMemoire/man/print.RV.multcomp.Rd |only
RVAideMemoire-0.9-22/RVAideMemoire/man/print.RVtest.Rd |only
RVAideMemoire-0.9-22/RVAideMemoire/man/prop.multcomp.Rd | 6
RVAideMemoire-0.9-22/RVAideMemoire/man/reg.intcomp.Rd | 3
RVAideMemoire-0.9-22/RVAideMemoire/man/reg.slpcomp.Rd | 3
RVAideMemoire-0.9-22/RVAideMemoire/man/scat.mix.categorical.Rd | 1
RVAideMemoire-0.9-22/RVAideMemoire/man/scat.mix.numeric.Rd | 1
RVAideMemoire-0.9-22/RVAideMemoire/man/spearman.ci.Rd | 6
RVAideMemoire-0.9-22/RVAideMemoire/man/surv.multcomp.Rd | 7
RVAideMemoire-0.9-22/RVAideMemoire/man/wilcox.paired.multcomp.Rd | 5
RVAideMemoire-0.9-22/RVAideMemoire/man/wilcox.signtest.Rd | 6
155 files changed, 1208 insertions(+), 742 deletions(-)
Title: R interface to the QuantLib library
Diff between RQuantLib versions 0.3.9 dated 2012-12-02 and 0.3.10 dated 2013-02-18
Description: The RQuantLib package makes parts of QuantLib visible to
the R user. Currently a number option pricing functions are
included, both vanilla and exotic, as well as a broad range of
fixed-income functions. Also included are general calendaring
and holiday utilities. Further software contributions are
welcome.
The QuantLib project aims to provide a comprehensive software framework
for quantitative finance. The goal is to provide a standard
open source library for quantitative analysis, modeling,
trading, and risk management of financial assets.
The Windows binary version is self-contained and does not require a
QuantLib (or Boost) installation.
RQuantLib uses the Rcpp R/C++ interface class library. See the Rcpp
package on CRAN (or R-Forge) for more information on Rcpp.
Note that while RQuantLib's code is licensed under the GPL (v2 or
later), QuantLib itself is released under a somewhat less
restrictive Open Source license (see QuantLib-License.txt).
Author: Dirk Eddelbuettel
Maintainer: Dirk Eddelbuettel
ChangeLog | 20 ++++++++
DESCRIPTION | 9 ++--
MD5 | 22 ++++-----
R/arrays.R | 35 ++++++++-------
cleanup | 31 ++-----------
demo/OptionSurfaces.R | 108 ++++++++++++++++++++++++------------------------
man/Bond.Rd | 4 -
man/DiscountCurve.Rd | 1
man/FixedRateBond.Rd | 3 -
man/FloatingRateBond.Rd | 2
man/ZeroCouponBond.Rd | 4 +
src/discount.cpp | 5 +-
12 files changed, 124 insertions(+), 120 deletions(-)
Title: Regression Discontinuity Estimation
Diff between rdd versions 0.50 dated 2012-10-26 and 0.51 dated 2013-02-18
Description: This package provides the tools to undertake estimation in
Regression Discontinuity Designs. Both sharp and fuzzy designs
are supported. Estimation is accomplished using local linear
regression. A provided function will utilize
Imbens-Kalyanaraman optimal bandwidth calculation. A function
is also included to test the assumption of no-sorting effects.
Author: Drew Dimmery
Maintainer: Drew Dimmery
rdd-0.50/rdd/Read-and-delete-me |only
rdd-0.51/rdd/DESCRIPTION | 22 +++---
rdd-0.51/rdd/MD5 | 21 +++---
rdd-0.51/rdd/NAMESPACE | 7 +-
rdd-0.51/rdd/R/RDestimate.R | 130 ++++++++++++++++++++++++----------------
rdd-0.51/rdd/R/plot.RD.R | 9 +-
rdd-0.51/rdd/R/print.RD.R |only
rdd-0.51/rdd/R/summary.RD.R | 104 +++++++++++++++++++-------------
rdd-0.51/rdd/VERSION | 61 +++---------------
rdd-0.51/rdd/man/RDestimate.Rd | 43 ++++++++-----
rdd-0.51/rdd/man/plot.RD.Rd | 5 +
rdd-0.51/rdd/man/print.RD.Rd |only
rdd-0.51/rdd/man/summary.RD.Rd | 13 +++-
13 files changed, 228 insertions(+), 187 deletions(-)
Title: imputation
Diff between imputation versions 2.0.0 dated 2013-02-15 and 2.0.1 dated 2013-02-18
Description: Fill missing values in a data matrix using mean, kNN, SVD,
Singular Value Thresholding, tree, or linear imputation,.
Author: Jeffrey Wong
Maintainer: Jeffrey Wong
DESCRIPTION | 8 ++++----
MD5 | 6 +++---
R/SVT.R | 2 +-
README.md | 11 +++++++++++
4 files changed, 19 insertions(+), 8 deletions(-)
Title: Effect Displays for Linear, Generalized Linear,
Multinomial-Logit, Proportional-Odds Logit Models and
Mixed-Effects Models
Diff between effects versions 2.2-3 dated 2012-12-15 and 2.2-4 dated 2013-02-18
Description: Graphical and tabular effect displays, e.g., of
interactions, for linear generalized linear, multinomial-logit,
and proportional-odds logit models.
Author: John Fox [aut, cre], Sanford Weisberg [aut], Jangman Hong
[aut], Robert Andersen [ctb], David Firth [ctb], Michael
Friendly [ctb], Steve Taylor [ctb]
Maintainer: John Fox
DESCRIPTION | 13 +-
MD5 | 16 +-
NEWS | 8 +
R/Effect.R | 61 +++++++++
R/effects.R | 58 ++++++++-
R/plot-summary-print-methods.R | 261 ++++++++++++++++++++++++++++++-----------
man/effect.Rd | 54 ++++++++
man/effects-package.Rd | 4
man/summary.effect.Rd | 14 +-
9 files changed, 396 insertions(+), 93 deletions(-)
Title: Heteroscedastic Discriminant Analysis
Diff between hda versions 0.2-10 dated 2013-01-07 and 0.2-11 dated 2013-02-18
Description: Functions to perform dimensionality reduction for
classification if the covariance matrices of the classes are
unequal.
Author: Gero Szepannek
Maintainer: Gero Szepannek
DESCRIPTION | 9 +++---
MD5 | 4 +-
R/hda.r | 90 ++++++++++++++++++++++++++++++++++++++++++++++++++++++++----
3 files changed, 91 insertions(+), 12 deletions(-)
Title: Companion to Applied Regression
Diff between car versions 2.0-15 dated 2012-10-09 and 2.0-16 dated 2013-02-18
Description: This package accompanies J. Fox and S. Weisberg, An R
Companion to Applied Regression, Second Edition, Sage, 2011.
Author: John Fox [aut, cre], Sanford Weisberg [aut], Douglas Bates
[ctb], David Firth [ctb], Michael Friendly [ctb], Gregor
Gorjanc [ctb], Spencer Graves [ctb], Richard Heiberger [ctb],
Rafael Laboissiere [ctb], Georges Monette [ctb], Henric Nilsson
[ctb], Derek Ogle [ctb], Brian Ripley [ctb], Achim Zeileis
[ctb], R-Core [ctb]
Maintainer: John Fox
DESCRIPTION | 13
MD5 | 144 ++++-----
NAMESPACE | 1
NEWS | 21 +
R/Boot.R | 76 ++--
R/Boxplot.R | 11
R/Ellipse.R | 176 +++++++----
R/bootCase.R | 34 +-
R/deltaMethod.R | 9
R/linearHypothesis.R | 32 +-
R/ncvTest.R | 4
R/residualPlots.R | 10
R/scatterplot.R | 11
R/scatterplotMatrix.R | 383 ++++++++++++------------
R/showLabels.R | 131 ++++----
R/utility-functions.R | 7
data/AMSsurvey.rda |binary
data/Adler.rda |binary
data/Angell.rda |binary
data/Anscombe.rda |binary
data/Baumann.rda |binary
data/Bfox.rda |binary
data/Blackmoor.rda |binary
data/Burt.rda |binary
data/CanPop.rda |binary
data/Chile.rda |binary
data/Chirot.rda |binary
data/Cowles.rda |binary
data/Davis.rda |binary
data/DavisThin.rda |binary
data/Depredations.rda |binary
data/Duncan.rda |binary
data/Ericksen.rda |binary
data/Florida.rda |binary
data/Freedman.rda |binary
data/Friendly.rda |binary
data/Ginzberg.rda |binary
data/Greene.rda |binary
data/Guyer.rda |binary
data/Hartnagel.rda |binary
data/Highway1.rda |binary
data/Leinhardt.rda |binary
data/Mandel.rda |binary
data/Migration.rda |binary
data/Moore.rda |binary
data/Mroz.rda |binary
data/OBrienKaiser.rda |binary
data/Ornstein.rda |binary
data/Pottery.rda |binary
data/Prestige.rda |binary
data/Quartet.rda |binary
data/Robey.rda |binary
data/SLID.rda |binary
data/Sahlins.rda |binary
data/Salaries.rda |binary
data/Soils.rda |binary
data/States.rda |binary
data/Transact.rda |binary
data/UN.rda |binary
data/USPop.rda |binary
data/Vocab.rda |binary
data/WeightLoss.rda |binary
data/Womenlf.rda |binary
data/Wool.rda |binary
man/Boot.Rd | 4
man/Boxplot.Rd | 6
man/Ellipses.Rd | 37 +-
man/bootCase.Rd | 10
man/car-package.Rd | 8
man/linearHypothesis.Rd | 744 ++++++++++++++++++++++++------------------------
man/powerTransform.Rd | 2
man/scatter3d.Rd | 7
man/showLabels.Rd | 7
73 files changed, 1032 insertions(+), 856 deletions(-)