Sat, 02 Mar 2013

Package spatialkernel (with last version 0.4-14) was removed from CRAN

Previous versions (as known to CRANberries) which should be available via the Archive link are:

2012-05-03 0.4-13
2012-05-03 0.4-14
2011-01-17 0.4-10
2009-01-05 0.4-9
2006-06-29 0.4-8

Permanent link
Package twitteR updated to version 1.1.0 with previous version 0.99.19 dated 2012-02-20

Title: R based Twitter client
Description: Provides an interface to the Twitter web API
Author: Jeff Gentry
Maintainer: Jeff Gentry

Diff between twitteR versions 0.99.19 dated 2012-02-20 and 1.1.0 dated 2013-03-02

 twitteR-0.99.19/twitteR/man/rateLimitInfo-class.Rd |only
 twitteR-0.99.19/twitteR/man/trend-class.Rd         |only
 twitteR-1.1.0/twitteR/ChangeLog                    |   19 +
 twitteR-1.1.0/twitteR/DESCRIPTION                  |    9 
 twitteR-1.1.0/twitteR/MD5                          |   50 ++--
 twitteR-1.1.0/twitteR/NAMESPACE                    |   12 
 twitteR-1.1.0/twitteR/R/account.R                  |   57 +---
 twitteR-1.1.0/twitteR/R/comm.R                     |  173 +++++--------
 twitteR-1.1.0/twitteR/R/followers.R                |   19 +
 twitteR-1.1.0/twitteR/R/search.R                   |   17 -
 twitteR-1.1.0/twitteR/R/statuses.R                 |   36 +-
 twitteR-1.1.0/twitteR/R/trends.R                   |   95 ++-----
 twitteR-1.1.0/twitteR/R/users.R                    |   20 +
 twitteR-1.1.0/twitteR/R/utils.R                    |   21 +
 twitteR-1.1.0/twitteR/inst/doc/twitteR.Rnw         |  260 ---------------------
 twitteR-1.1.0/twitteR/inst/doc/twitteR.pdf         |binary
 twitteR-1.1.0/twitteR/inst/sweave                  |only
 twitteR-1.1.0/twitteR/man/directMessage-class.Rd   |    7 
 twitteR-1.1.0/twitteR/man/friendships.Rd           |only
 twitteR-1.1.0/twitteR/man/getCurRateLimitInfo.Rd   |   29 +-
 twitteR-1.1.0/twitteR/man/getTrends.Rd             |   38 +--
 twitteR-1.1.0/twitteR/man/getUser.Rd               |    3 
 twitteR-1.1.0/twitteR/man/registerTwitterOAuth.Rd  |   12 
 twitteR-1.1.0/twitteR/man/search.Rd                |   27 +-
 twitteR-1.1.0/twitteR/man/status-class.Rd          |   18 -
 twitteR-1.1.0/twitteR/man/timelines.Rd             |   27 --
 twitteR-1.1.0/twitteR/man/twListToDF.Rd            |   11 
 twitteR-1.1.0/twitteR/man/user-class.Rd            |    9 
 28 files changed, 355 insertions(+), 614 deletions(-)

More information about twitteR at CRAN
Permanent link

Package spatialprobit updated to version 0.9-8 with previous version 0.9-7 dated 2013-02-18

Title: Spatial Probit Models
Description: Bayesian Estimation of Spatial Probit and Tobit Models
Author: Stefan Wilhelm and Miguel Godinho de Matos
Maintainer: Stefan Wilhelm

Diff between spatialprobit versions 0.9-7 dated 2013-02-18 and 0.9-8 dated 2013-03-02

 DESCRIPTION                       |   12 +++----
 MD5                               |   18 ++++++----
 NAMESPACE                         |    4 ++
 NEWS                              |    4 ++
 R/SpatialProbit-MCMC.R            |   63 ++++++++++++++++++++++++++++++++------
 R/sar_base.r                      |   51 ------------------------------
 R/semprobit.R                     |   25 +++++++++++++++
 inst                              |only
 man/logLik.Rd                     |only
 man/marginal.effects.sarprobit.Rd |   22 +++----------
 10 files changed, 109 insertions(+), 90 deletions(-)

More information about spatialprobit at CRAN
Permanent link

Package sna updated to version 2.3-1 with previous version 2.2-2 dated 2013-01-10

Title: Tools for Social Network Analysis
Description: A range of tools for social network analysis, including node and graph-level indices, structural distance and covariance methods, structural equivalence detection, network regression, random graph generation, and 2D/3D network visualization.
Author: Carter T. Butts
Maintainer: Carter T. Butts

Diff between sna versions 2.2-2 dated 2013-01-10 and 2.3-1 dated 2013-03-02

 ChangeLog           |   41 +++++++
 DESCRIPTION         |   26 ++---
 MD5                 |   39 +++----
 NAMESPACE           |    7 -
 R/connectivity.R    |    4 
 R/dataprep.R        |   62 ++++++++---
 R/gli.R             |  180 ++++++++++++++++++++++++++++++----
 R/gtest.R           |    6 -
 R/models.R          |   30 ++---
 R/nli.R             |    4 
 R/randomgraph.R     |   10 -
 R/sna-operators.R   |    4 
 R/visualization.R   |  269 ++++++++++++++++++++++++++++++++--------------------
 R/zzz.R             |only
 man/gden.Rd         |    4 
 man/gplot.Rd        |   33 +++---
 man/grecip.Rd       |   12 +-
 man/gtrans.Rd       |   13 +-
 man/sna-coercion.Rd |    6 -
 src/triads.c        |   79 ++++++++++-----
 src/triads.h        |    4 
 21 files changed, 573 insertions(+), 260 deletions(-)

More information about sna at CRAN
Permanent link

Package SKAT updated to version 0.82 with previous version 0.81 dated 2013-01-15

Title: SNP-set (Sequence) Kernel Association Test
Description: Kernel based SNP set test
Author: Seunggeun Lee, Larisa Miropolsky and Micheal Wu
Maintainer: Seunggeun (Shawn) Lee

Diff between SKAT versions 0.81 dated 2013-01-15 and 0.82 dated 2013-03-02

 DESCRIPTION                     |    9 -
 MD5                             |   22 ++--
 R/Function.R                    |   41 ++++++-
 R/KMTest_Linear.R               |   16 ++
 R/KMTest_Logistic_VarMatching.R |   50 ++++++---
 R/KMTest_Optimal.R              |   30 ++++-
 R/Power.R                       |  215 ++++++++++++++++++++++++++++++++++++++--
 R/Power_Corr.R                  |  193 -----------------------------------
 R/SSD.R                         |   52 ++++++++-
 inst/doc/SKAT.pdf               |binary
 man/SKAT.rd                     |   12 +-
 src/error_messages.h            |    2 
 12 files changed, 383 insertions(+), 259 deletions(-)

More information about SKAT at CRAN
Permanent link

Package GrapheR updated to version 1.9-81 with previous version 1.9-80 dated 2012-11-10

Title: A multi-platform GUI for drawing customizable graphs in R
Description: GrapheR is a multi-platform user interface for drawing highly customizable graphs in R. It aims to be a valuable help to quickly draw publishable graphs without any knowledge of R commands. Six kinds of graph are available: histogram, box-and-whisker plot, bar plot, pie chart, curve and scatter plot.
Author: Maxime Hervé
Maintainer: Maxime Hervé

Diff between GrapheR versions 1.9-80 dated 2012-11-10 and 1.9-81 dated 2013-03-02

 DESCRIPTION            |    9 +++++----
 MD5                    |   10 +++++-----
 NEWS                   |    6 ++++++
 R/Sources.R            |   24 ++++++++++++++++++++----
 R/zzzz.R               |    2 +-
 man/GrapheR-package.Rd |    4 ++--
 6 files changed, 39 insertions(+), 16 deletions(-)

More information about GrapheR at CRAN
Permanent link

Package ggplot2 updated to version 0.9.3.1 with previous version 0.9.3 dated 2012-12-05

Title: An implementation of the Grammar of Graphics
Description: An implementation of the grammar of graphics in R. It combines the advantages of both base and lattice graphics: conditioning and shared axes are handled automatically, and you can still build up a plot step by step from multiple data sources. It also implements a sophisticated multidimensional conditioning system and a consistent interface to map data to aesthetic attributes. See the ggplot2 website for more information, documentation and examples.
Author: Hadley Wickham , Winston Chang
Maintainer: Hadley Wickham

Diff between ggplot2 versions 0.9.3 dated 2012-12-05 and 0.9.3.1 dated 2013-03-02

 DESCRIPTION                |    7 +++---
 MD5                        |   46 ++++++++++++++++++++---------------------
 NEWS                       |   20 ++++++++++++++++++
 R/annotation-logticks.r    |   29 +++++++++++++++++++++-----
 R/geom-crossbar.r          |   10 ++++++++-
 R/geom-errorh.r            |    2 -
 R/geom-path-density2d.r    |    2 -
 R/geom-polygon.r           |    5 ++++
 R/position-dodge.r         |    5 ++--
 R/quick-plot.r             |   50 ++++++++++++++++++++++-----------------------
 R/scale-continuous.r       |    2 -
 R/stat-contour.r           |    6 +++--
 R/stat-density.r           |    2 -
 R/stat-summary.r           |    3 --
 R/theme-elements.r         |    3 +-
 R/theme.r                  |    3 ++
 R/utilities-help.r         |   29 +++++++++++++-------------
 build/partial.rdb          |binary
 man/annotation_logticks.Rd |   15 ++++++++++++-
 man/position_dodge.Rd      |    5 ++--
 man/qplot.Rd               |    2 -
 man/scale_continuous.Rd    |    2 -
 man/stat_density.Rd        |    2 -
 man/theme.Rd               |    3 ++
 24 files changed, 164 insertions(+), 89 deletions(-)

More information about ggplot2 at CRAN
Permanent link

Package texreg updated to version 1.22 with previous version 1.21 dated 2013-02-19

Title: Conversion of R regression output to LaTeX or HTML tables.
Description: texreg converts coefficients, standard errors, significance stars, and goodness-of-fit statistics of statistical models into LaTeX tables or HTML tables/MS Word documents or to nicely formatted screen output for the R console for easy model comparison. A list of several models can be combined in a single table. The output is highly customizable. New model types can be easily implemented.
Author: Philip Leifeld
Maintainer: Philip Leifeld

Diff between texreg versions 1.21 dated 2013-02-19 and 1.22 dated 2013-03-02

 texreg-1.21/texreg/vignettes/texreg.Rnw.backup |only
 texreg-1.22/texreg/DESCRIPTION                 |   13 -
 texreg-1.22/texreg/MD5                         |   25 +--
 texreg-1.22/texreg/NAMESPACE                   |    1 
 texreg-1.22/texreg/R/extract.R                 |   61 +++++++
 texreg-1.22/texreg/R/internal.R                |  134 +++++++++-------
 texreg-1.22/texreg/R/texreg.R                  |  202 +++++++++++++++++++------
 texreg-1.22/texreg/inst/doc/texreg.Rnw         |    3 
 texreg-1.22/texreg/inst/doc/texreg.pdf         |binary
 texreg-1.22/texreg/man/extract-methods.Rd      |    5 
 texreg-1.22/texreg/man/extract.Rd              |    4 
 texreg-1.22/texreg/man/texreg-package.Rd       |    7 
 texreg-1.22/texreg/man/texreg.Rd               |   59 ++++---
 texreg-1.22/texreg/vignettes/texreg.Rnw        |    3 
 14 files changed, 361 insertions(+), 156 deletions(-)

More information about texreg at CRAN
Permanent link

Package RcppArmadillo updated to version 0.3.800.0 with previous version 0.3.6.3 dated 2013-02-20

Title: Rcpp integration for Armadillo templated linear algebra library
Description: R and Armadillo integration using Rcpp Armadillo is a templated C++ linear algebra library (by Conrad Sanderson) that aims towards a good balance between speed and ease of use. Integer, floating point and complex numbers are supported, as well as a subset of trigonometric and statistics functions. Various matrix decompositions are provided through optional integration with LAPACK and ATLAS libraries. A delayed evaluation approach is employed (during compile time) to combine several operations into one, and to reduce (or eliminate) the need for temporaries. This is accomplished through recursive templates and template meta-programming. This library is useful if C++ has been decided as the language of choice (due to speed and/or integration capabilities), rather than another language. The RcppArmadillo package includes the header files from the templated Armadillo library (currently version 3.800.0). Thus users do not need to install Armadillo itself in order to use RcppArmadillo. This Armadillo integration provides a nice illustration of the capabilities of the Rcpp package for seamless R and C++ integration. Armadillo is licensed under the MPL 2.0, while RcppArmadillo (the Rcpp bindings/bridge to Armadillo) is licensed under the GNU GPL version 2 or later, as is the rest of Rcpp.
Author: Romain Francois, Dirk Eddelbuettel and Doug Bates
Maintainer: Dirk Eddelbuettel

Diff between RcppArmadillo versions 0.3.6.3 dated 2013-02-20 and 0.3.800.0 dated 2013-03-02

 .Rinstignore                                             |    2 
 ChangeLog                                                |   15 
 DESCRIPTION                                              |   20 
 MD5                                                      |  707 +++++------
 inst/CITATION                                            |only
 inst/NEWS.Rd                                             |   21 
 inst/doc/Makefile                                        |    8 
 inst/doc/RcppArmadillo-intro.Rnw                         |  892 ++++++++++++++-
 inst/doc/RcppArmadillo-intro.pdf                         |binary
 inst/doc/RcppArmadillo-unitTests.pdf                     |binary
 inst/doc/RcppArmadillo.bib                               |   48 
 inst/doc/elsarticle-harv.bst                             |only
 inst/doc/elsarticle.cls                                  |only
 inst/doc/unitTests-results/RcppArmadillo-unitTests.html  |    6 
 inst/doc/unitTests-results/RcppArmadillo-unitTests.txt   |   32 
 inst/include/armadillo                                   |   17 
 inst/include/armadillo_bits/BaseCube_bones.hpp           |   11 
 inst/include/armadillo_bits/BaseCube_meat.hpp            |   11 
 inst/include/armadillo_bits/Base_bones.hpp               |   11 
 inst/include/armadillo_bits/Base_meat.hpp                |   11 
 inst/include/armadillo_bits/Col_bones.hpp                |   11 
 inst/include/armadillo_bits/Col_meat.hpp                 |   11 
 inst/include/armadillo_bits/Cube_bones.hpp               |   36 
 inst/include/armadillo_bits/Cube_meat.hpp                |  241 ++--
 inst/include/armadillo_bits/GenCube_bones.hpp            |   11 
 inst/include/armadillo_bits/GenCube_meat.hpp             |   11 
 inst/include/armadillo_bits/Gen_bones.hpp                |   11 
 inst/include/armadillo_bits/Gen_meat.hpp                 |   11 
 inst/include/armadillo_bits/GlueCube_bones.hpp           |   11 
 inst/include/armadillo_bits/GlueCube_meat.hpp            |   11 
 inst/include/armadillo_bits/Glue_bones.hpp               |   11 
 inst/include/armadillo_bits/Glue_meat.hpp                |   11 
 inst/include/armadillo_bits/Mat_bones.hpp                |   18 
 inst/include/armadillo_bits/Mat_meat.hpp                 |   82 +
 inst/include/armadillo_bits/OpCube_bones.hpp             |   11 
 inst/include/armadillo_bits/OpCube_meat.hpp              |   11 
 inst/include/armadillo_bits/Op_bones.hpp                 |   11 
 inst/include/armadillo_bits/Op_meat.hpp                  |   11 
 inst/include/armadillo_bits/Proxy.hpp                    |   11 
 inst/include/armadillo_bits/ProxyCube.hpp                |   11 
 inst/include/armadillo_bits/Row_bones.hpp                |   11 
 inst/include/armadillo_bits/Row_meat.hpp                 |   11 
 inst/include/armadillo_bits/SpBase_bones.hpp             |   11 
 inst/include/armadillo_bits/SpBase_meat.hpp              |   11 
 inst/include/armadillo_bits/SpCol_bones.hpp              |   11 
 inst/include/armadillo_bits/SpCol_meat.hpp               |   11 
 inst/include/armadillo_bits/SpGlue_bones.hpp             |   11 
 inst/include/armadillo_bits/SpGlue_meat.hpp              |   11 
 inst/include/armadillo_bits/SpMat_bones.hpp              |   11 
 inst/include/armadillo_bits/SpMat_iterators_meat.hpp     |   11 
 inst/include/armadillo_bits/SpMat_meat.hpp               |   11 
 inst/include/armadillo_bits/SpOp_bones.hpp               |   11 
 inst/include/armadillo_bits/SpOp_meat.hpp                |   11 
 inst/include/armadillo_bits/SpProxy.hpp                  |   11 
 inst/include/armadillo_bits/SpRow_bones.hpp              |   11 
 inst/include/armadillo_bits/SpRow_meat.hpp               |   11 
 inst/include/armadillo_bits/SpSubview_bones.hpp          |   11 
 inst/include/armadillo_bits/SpSubview_iterators_meat.hpp |   11 
 inst/include/armadillo_bits/SpSubview_meat.hpp           |   11 
 inst/include/armadillo_bits/SpValProxy_bones.hpp         |   11 
 inst/include/armadillo_bits/SpValProxy_meat.hpp          |   11 
 inst/include/armadillo_bits/access.hpp                   |   11 
 inst/include/armadillo_bits/arma_config.hpp              |   11 
 inst/include/armadillo_bits/arma_ostream_bones.hpp       |   11 
 inst/include/armadillo_bits/arma_ostream_meat.hpp        |   11 
 inst/include/armadillo_bits/arma_static_check.hpp        |   11 
 inst/include/armadillo_bits/arma_version.hpp             |   21 
 inst/include/armadillo_bits/arrayops_bones.hpp           |   11 
 inst/include/armadillo_bits/arrayops_meat.hpp            |   11 
 inst/include/armadillo_bits/atlas_bones.hpp              |   11 
 inst/include/armadillo_bits/atlas_wrapper.hpp            |   11 
 inst/include/armadillo_bits/auxlib_bones.hpp             |   11 
 inst/include/armadillo_bits/auxlib_meat.hpp              |  299 ++---
 inst/include/armadillo_bits/blas_bones.hpp               |   11 
 inst/include/armadillo_bits/blas_wrapper.hpp             |   11 
 inst/include/armadillo_bits/cmath_wrap.hpp               |   11 
 inst/include/armadillo_bits/compiler_setup.hpp           |   11 
 inst/include/armadillo_bits/cond_rel_bones.hpp           |   11 
 inst/include/armadillo_bits/cond_rel_meat.hpp            |   11 
 inst/include/armadillo_bits/config.hpp                   |   11 
 inst/include/armadillo_bits/constants.hpp                |   27 
 inst/include/armadillo_bits/constants_compat.hpp         |   11 
 inst/include/armadillo_bits/debug.hpp                    |   11 
 inst/include/armadillo_bits/diagmat_proxy.hpp            |   11 
 inst/include/armadillo_bits/diagview_bones.hpp           |   11 
 inst/include/armadillo_bits/diagview_meat.hpp            |   11 
 inst/include/armadillo_bits/diskio_bones.hpp             |   11 
 inst/include/armadillo_bits/diskio_meat.hpp              |   11 
 inst/include/armadillo_bits/eGlueCube_bones.hpp          |   11 
 inst/include/armadillo_bits/eGlueCube_meat.hpp           |   11 
 inst/include/armadillo_bits/eGlue_bones.hpp              |   11 
 inst/include/armadillo_bits/eGlue_meat.hpp               |   11 
 inst/include/armadillo_bits/eOpCube_bones.hpp            |   11 
 inst/include/armadillo_bits/eOpCube_meat.hpp             |   11 
 inst/include/armadillo_bits/eOp_bones.hpp                |   11 
 inst/include/armadillo_bits/eOp_meat.hpp                 |   11 
 inst/include/armadillo_bits/eglue_core_bones.hpp         |   11 
 inst/include/armadillo_bits/eglue_core_meat.hpp          |   11 
 inst/include/armadillo_bits/eop_aux.hpp                  |   67 -
 inst/include/armadillo_bits/eop_core_bones.hpp           |   16 
 inst/include/armadillo_bits/eop_core_meat.hpp            |   17 
 inst/include/armadillo_bits/field_bones.hpp              |   11 
 inst/include/armadillo_bits/field_meat.hpp               |   11 
 inst/include/armadillo_bits/fn_accu.hpp                  |   11 
 inst/include/armadillo_bits/fn_as_scalar.hpp             |   11 
 inst/include/armadillo_bits/fn_chol.hpp                  |   11 
 inst/include/armadillo_bits/fn_conv.hpp                  |   11 
 inst/include/armadillo_bits/fn_conv_to.hpp               |   11 
 inst/include/armadillo_bits/fn_cor.hpp                   |   11 
 inst/include/armadillo_bits/fn_cov.hpp                   |   11 
 inst/include/armadillo_bits/fn_cross.hpp                 |   11 
 inst/include/armadillo_bits/fn_cumsum.hpp                |   11 
 inst/include/armadillo_bits/fn_det.hpp                   |   11 
 inst/include/armadillo_bits/fn_diagmat.hpp               |   11 
 inst/include/armadillo_bits/fn_diagvec.hpp               |   11 
 inst/include/armadillo_bits/fn_dot.hpp                   |   11 
 inst/include/armadillo_bits/fn_eig.hpp                   |   11 
 inst/include/armadillo_bits/fn_elem.hpp                  |   78 -
 inst/include/armadillo_bits/fn_eps.hpp                   |   15 
 inst/include/armadillo_bits/fn_eye.hpp                   |   11 
 inst/include/armadillo_bits/fn_flip.hpp                  |   11 
 inst/include/armadillo_bits/fn_hist.hpp                  |   11 
 inst/include/armadillo_bits/fn_histc.hpp                 |   11 
 inst/include/armadillo_bits/fn_inv.hpp                   |   11 
 inst/include/armadillo_bits/fn_join.hpp                  |   11 
 inst/include/armadillo_bits/fn_kron.hpp                  |   11 
 inst/include/armadillo_bits/fn_log_det.hpp               |   11 
 inst/include/armadillo_bits/fn_lu.hpp                    |   11 
 inst/include/armadillo_bits/fn_max.hpp                   |   11 
 inst/include/armadillo_bits/fn_mean.hpp                  |   11 
 inst/include/armadillo_bits/fn_median.hpp                |   11 
 inst/include/armadillo_bits/fn_min.hpp                   |   11 
 inst/include/armadillo_bits/fn_misc.hpp                  |   75 -
 inst/include/armadillo_bits/fn_n_unique.hpp              |   11 
 inst/include/armadillo_bits/fn_norm.hpp                  |   19 
 inst/include/armadillo_bits/fn_ones.hpp                  |   11 
 inst/include/armadillo_bits/fn_pinv.hpp                  |   11 
 inst/include/armadillo_bits/fn_princomp.hpp              |   11 
 inst/include/armadillo_bits/fn_prod.hpp                  |   11 
 inst/include/armadillo_bits/fn_qr.hpp                    |   11 
 inst/include/armadillo_bits/fn_randn.hpp                 |   11 
 inst/include/armadillo_bits/fn_randu.hpp                 |   11 
 inst/include/armadillo_bits/fn_rank.hpp                  |   11 
 inst/include/armadillo_bits/fn_repmat.hpp                |   11 
 inst/include/armadillo_bits/fn_reshape.hpp               |   11 
 inst/include/armadillo_bits/fn_resize.hpp                |   11 
 inst/include/armadillo_bits/fn_shuffle.hpp               |   11 
 inst/include/armadillo_bits/fn_solve.hpp                 |   11 
 inst/include/armadillo_bits/fn_sort.hpp                  |   11 
 inst/include/armadillo_bits/fn_sort_index.hpp            |   11 
 inst/include/armadillo_bits/fn_speye.hpp                 |   11 
 inst/include/armadillo_bits/fn_spones.hpp                |   11 
 inst/include/armadillo_bits/fn_sprandn.hpp               |   11 
 inst/include/armadillo_bits/fn_sprandu.hpp               |   11 
 inst/include/armadillo_bits/fn_stddev.hpp                |   11 
 inst/include/armadillo_bits/fn_strans.hpp                |   11 
 inst/include/armadillo_bits/fn_sum.hpp                   |   11 
 inst/include/armadillo_bits/fn_svd.hpp                   |   11 
 inst/include/armadillo_bits/fn_syl_lyap.hpp              |   11 
 inst/include/armadillo_bits/fn_symmat.hpp                |   11 
 inst/include/armadillo_bits/fn_toeplitz.hpp              |   37 
 inst/include/armadillo_bits/fn_trace.hpp                 |   11 
 inst/include/armadillo_bits/fn_trans.hpp                 |   11 
 inst/include/armadillo_bits/fn_trig.hpp                  |   11 
 inst/include/armadillo_bits/fn_trimat.hpp                |   11 
 inst/include/armadillo_bits/fn_trunc_exp.hpp             |   13 
 inst/include/armadillo_bits/fn_trunc_log.hpp             |   13 
 inst/include/armadillo_bits/fn_unique.hpp                |   11 
 inst/include/armadillo_bits/fn_var.hpp                   |   11 
 inst/include/armadillo_bits/fn_zeros.hpp                 |   11 
 inst/include/armadillo_bits/format_wrap.hpp              |   11 
 inst/include/armadillo_bits/forward_bones.hpp            |   11 
 inst/include/armadillo_bits/gemm.hpp                     |   11 
 inst/include/armadillo_bits/gemm_mixed.hpp               |   11 
 inst/include/armadillo_bits/gemv.hpp                     |   11 
 inst/include/armadillo_bits/glue_conv_bones.hpp          |   11 
 inst/include/armadillo_bits/glue_conv_meat.hpp           |   21 
 inst/include/armadillo_bits/glue_cor_bones.hpp           |   11 
 inst/include/armadillo_bits/glue_cor_meat.hpp            |   11 
 inst/include/armadillo_bits/glue_cov_bones.hpp           |   11 
 inst/include/armadillo_bits/glue_cov_meat.hpp            |   11 
 inst/include/armadillo_bits/glue_cross_bones.hpp         |   11 
 inst/include/armadillo_bits/glue_cross_meat.hpp          |   11 
 inst/include/armadillo_bits/glue_hist_bones.hpp          |   11 
 inst/include/armadillo_bits/glue_hist_meat.hpp           |   17 
 inst/include/armadillo_bits/glue_histc_bones.hpp         |   11 
 inst/include/armadillo_bits/glue_histc_meat.hpp          |   17 
 inst/include/armadillo_bits/glue_join_bones.hpp          |   11 
 inst/include/armadillo_bits/glue_join_meat.hpp           |   11 
 inst/include/armadillo_bits/glue_kron_bones.hpp          |   11 
 inst/include/armadillo_bits/glue_kron_meat.hpp           |   11 
 inst/include/armadillo_bits/glue_mixed_bones.hpp         |   11 
 inst/include/armadillo_bits/glue_mixed_meat.hpp          |   11 
 inst/include/armadillo_bits/glue_relational_bones.hpp    |   11 
 inst/include/armadillo_bits/glue_relational_meat.hpp     |   11 
 inst/include/armadillo_bits/glue_solve_bones.hpp         |   11 
 inst/include/armadillo_bits/glue_solve_meat.hpp          |   11 
 inst/include/armadillo_bits/glue_times_bones.hpp         |   11 
 inst/include/armadillo_bits/glue_times_meat.hpp          |   11 
 inst/include/armadillo_bits/glue_toeplitz_bones.hpp      |   26 
 inst/include/armadillo_bits/glue_toeplitz_meat.hpp       |  195 ---
 inst/include/armadillo_bits/hdf5_misc.hpp                |   11 
 inst/include/armadillo_bits/include_atlas.hpp            |   11 
 inst/include/armadillo_bits/injector_bones.hpp           |   11 
 inst/include/armadillo_bits/injector_meat.hpp            |   11 
 inst/include/armadillo_bits/lapack_bones.hpp             |   11 
 inst/include/armadillo_bits/lapack_wrapper.hpp           |   11 
 inst/include/armadillo_bits/memory.hpp                   |   11 
 inst/include/armadillo_bits/mtGlueCube_bones.hpp         |   11 
 inst/include/armadillo_bits/mtGlueCube_meat.hpp          |   11 
 inst/include/armadillo_bits/mtGlue_bones.hpp             |   11 
 inst/include/armadillo_bits/mtGlue_meat.hpp              |   11 
 inst/include/armadillo_bits/mtOpCube_bones.hpp           |   11 
 inst/include/armadillo_bits/mtOpCube_meat.hpp            |   11 
 inst/include/armadillo_bits/mtOp_bones.hpp               |   11 
 inst/include/armadillo_bits/mtOp_meat.hpp                |   11 
 inst/include/armadillo_bits/mtSpOp_bones.hpp             |   11 
 inst/include/armadillo_bits/mtSpOp_meat.hpp              |   11 
 inst/include/armadillo_bits/op_chol_bones.hpp            |   11 
 inst/include/armadillo_bits/op_chol_meat.hpp             |   11 
 inst/include/armadillo_bits/op_cor_bones.hpp             |   11 
 inst/include/armadillo_bits/op_cor_meat.hpp              |   11 
 inst/include/armadillo_bits/op_cov_bones.hpp             |   11 
 inst/include/armadillo_bits/op_cov_meat.hpp              |   11 
 inst/include/armadillo_bits/op_cumsum_bones.hpp          |   11 
 inst/include/armadillo_bits/op_cumsum_meat.hpp           |   11 
 inst/include/armadillo_bits/op_cx_scalar_bones.hpp       |   11 
 inst/include/armadillo_bits/op_cx_scalar_meat.hpp        |   11 
 inst/include/armadillo_bits/op_diagmat_bones.hpp         |   11 
 inst/include/armadillo_bits/op_diagmat_meat.hpp          |   11 
 inst/include/armadillo_bits/op_diagvec_bones.hpp         |   11 
 inst/include/armadillo_bits/op_diagvec_meat.hpp          |   11 
 inst/include/armadillo_bits/op_dot_bones.hpp             |   13 
 inst/include/armadillo_bits/op_dot_meat.hpp              |   13 
 inst/include/armadillo_bits/op_dotext_bones.hpp          |   11 
 inst/include/armadillo_bits/op_dotext_meat.hpp           |   11 
 inst/include/armadillo_bits/op_find_bones.hpp            |   11 
 inst/include/armadillo_bits/op_find_meat.hpp             |   11 
 inst/include/armadillo_bits/op_flip_bones.hpp            |   11 
 inst/include/armadillo_bits/op_flip_meat.hpp             |   11 
 inst/include/armadillo_bits/op_hist_bones.hpp            |   11 
 inst/include/armadillo_bits/op_hist_meat.hpp             |   11 
 inst/include/armadillo_bits/op_htrans_bones.hpp          |   11 
 inst/include/armadillo_bits/op_htrans_meat.hpp           |   11 
 inst/include/armadillo_bits/op_inv_bones.hpp             |   11 
 inst/include/armadillo_bits/op_inv_meat.hpp              |   11 
 inst/include/armadillo_bits/op_max_bones.hpp             |   11 
 inst/include/armadillo_bits/op_max_meat.hpp              |   11 
 inst/include/armadillo_bits/op_mean_bones.hpp            |   11 
 inst/include/armadillo_bits/op_mean_meat.hpp             |   11 
 inst/include/armadillo_bits/op_median_bones.hpp          |   11 
 inst/include/armadillo_bits/op_median_meat.hpp           |   11 
 inst/include/armadillo_bits/op_min_bones.hpp             |   11 
 inst/include/armadillo_bits/op_min_meat.hpp              |   11 
 inst/include/armadillo_bits/op_misc_bones.hpp            |   11 
 inst/include/armadillo_bits/op_misc_meat.hpp             |   11 
 inst/include/armadillo_bits/op_pinv_bones.hpp            |   11 
 inst/include/armadillo_bits/op_pinv_meat.hpp             |   11 
 inst/include/armadillo_bits/op_princomp_bones.hpp        |   11 
 inst/include/armadillo_bits/op_princomp_meat.hpp         |   11 
 inst/include/armadillo_bits/op_prod_bones.hpp            |   11 
 inst/include/armadillo_bits/op_prod_meat.hpp             |   11 
 inst/include/armadillo_bits/op_relational_bones.hpp      |   11 
 inst/include/armadillo_bits/op_relational_meat.hpp       |   11 
 inst/include/armadillo_bits/op_repmat_bones.hpp          |   11 
 inst/include/armadillo_bits/op_repmat_meat.hpp           |   11 
 inst/include/armadillo_bits/op_reshape_bones.hpp         |   11 
 inst/include/armadillo_bits/op_reshape_meat.hpp          |   11 
 inst/include/armadillo_bits/op_resize_bones.hpp          |   11 
 inst/include/armadillo_bits/op_resize_meat.hpp           |   11 
 inst/include/armadillo_bits/op_shuffle_bones.hpp         |   11 
 inst/include/armadillo_bits/op_shuffle_meat.hpp          |   11 
 inst/include/armadillo_bits/op_sort_bones.hpp            |   11 
 inst/include/armadillo_bits/op_sort_meat.hpp             |   11 
 inst/include/armadillo_bits/op_stddev_bones.hpp          |   11 
 inst/include/armadillo_bits/op_stddev_meat.hpp           |   11 
 inst/include/armadillo_bits/op_strans_bones.hpp          |   11 
 inst/include/armadillo_bits/op_strans_meat.hpp           |   11 
 inst/include/armadillo_bits/op_sum_bones.hpp             |   11 
 inst/include/armadillo_bits/op_sum_meat.hpp              |   11 
 inst/include/armadillo_bits/op_symmat_bones.hpp          |   11 
 inst/include/armadillo_bits/op_symmat_meat.hpp           |   11 
 inst/include/armadillo_bits/op_toeplitz_bones.hpp        |only
 inst/include/armadillo_bits/op_toeplitz_meat.hpp         |only
 inst/include/armadillo_bits/op_trimat_bones.hpp          |   11 
 inst/include/armadillo_bits/op_trimat_meat.hpp           |   11 
 inst/include/armadillo_bits/op_unique_bones.hpp          |   11 
 inst/include/armadillo_bits/op_unique_meat.hpp           |   11 
 inst/include/armadillo_bits/op_var_bones.hpp             |   11 
 inst/include/armadillo_bits/op_var_meat.hpp              |   11 
 inst/include/armadillo_bits/operator_cube_div.hpp        |   11 
 inst/include/armadillo_bits/operator_cube_minus.hpp      |   11 
 inst/include/armadillo_bits/operator_cube_plus.hpp       |   11 
 inst/include/armadillo_bits/operator_cube_relational.hpp |   11 
 inst/include/armadillo_bits/operator_cube_schur.hpp      |   11 
 inst/include/armadillo_bits/operator_cube_times.hpp      |   11 
 inst/include/armadillo_bits/operator_div.hpp             |   11 
 inst/include/armadillo_bits/operator_minus.hpp           |   11 
 inst/include/armadillo_bits/operator_ostream.hpp         |   11 
 inst/include/armadillo_bits/operator_plus.hpp            |   11 
 inst/include/armadillo_bits/operator_relational.hpp      |   11 
 inst/include/armadillo_bits/operator_schur.hpp           |   11 
 inst/include/armadillo_bits/operator_times.hpp           |   11 
 inst/include/armadillo_bits/podarray_bones.hpp           |   11 
 inst/include/armadillo_bits/podarray_meat.hpp            |   11 
 inst/include/armadillo_bits/promote_type.hpp             |   11 
 inst/include/armadillo_bits/restrictors.hpp              |   28 
 inst/include/armadillo_bits/running_stat_bones.hpp       |   11 
 inst/include/armadillo_bits/running_stat_meat.hpp        |   11 
 inst/include/armadillo_bits/running_stat_vec_bones.hpp   |   11 
 inst/include/armadillo_bits/running_stat_vec_meat.hpp    |   55 
 inst/include/armadillo_bits/span.hpp                     |   11 
 inst/include/armadillo_bits/spglue_minus_bones.hpp       |   11 
 inst/include/armadillo_bits/spglue_minus_meat.hpp        |   11 
 inst/include/armadillo_bits/spglue_plus_bones.hpp        |   11 
 inst/include/armadillo_bits/spglue_plus_meat.hpp         |   11 
 inst/include/armadillo_bits/spglue_times_bones.hpp       |   11 
 inst/include/armadillo_bits/spglue_times_meat.hpp        |   11 
 inst/include/armadillo_bits/spop_htrans_bones.hpp        |   11 
 inst/include/armadillo_bits/spop_htrans_meat.hpp         |   11 
 inst/include/armadillo_bits/spop_max_bones.hpp           |   11 
 inst/include/armadillo_bits/spop_max_meat.hpp            |   11 
 inst/include/armadillo_bits/spop_mean_bones.hpp          |   11 
 inst/include/armadillo_bits/spop_mean_meat.hpp           |   11 
 inst/include/armadillo_bits/spop_min_bones.hpp           |   11 
 inst/include/armadillo_bits/spop_min_meat.hpp            |   11 
 inst/include/armadillo_bits/spop_misc_bones.hpp          |   11 
 inst/include/armadillo_bits/spop_misc_meat.hpp           |   11 
 inst/include/armadillo_bits/spop_strans_bones.hpp        |   11 
 inst/include/armadillo_bits/spop_strans_meat.hpp         |   11 
 inst/include/armadillo_bits/spop_sum_bones.hpp           |   11 
 inst/include/armadillo_bits/spop_sum_meat.hpp            |   11 
 inst/include/armadillo_bits/spop_var_bones.hpp           |   11 
 inst/include/armadillo_bits/spop_var_meat.hpp            |   11 
 inst/include/armadillo_bits/strip.hpp                    |   11 
 inst/include/armadillo_bits/subview_bones.hpp            |   11 
 inst/include/armadillo_bits/subview_cube_bones.hpp       |   11 
 inst/include/armadillo_bits/subview_cube_meat.hpp        |   11 
 inst/include/armadillo_bits/subview_each_bones.hpp       |   11 
 inst/include/armadillo_bits/subview_each_meat.hpp        |   15 
 inst/include/armadillo_bits/subview_elem1_bones.hpp      |   11 
 inst/include/armadillo_bits/subview_elem1_meat.hpp       |   11 
 inst/include/armadillo_bits/subview_elem2_bones.hpp      |   11 
 inst/include/armadillo_bits/subview_elem2_meat.hpp       |   11 
 inst/include/armadillo_bits/subview_field_bones.hpp      |   11 
 inst/include/armadillo_bits/subview_field_meat.hpp       |   11 
 inst/include/armadillo_bits/subview_meat.hpp             |   11 
 inst/include/armadillo_bits/traits.hpp                   |   11 
 inst/include/armadillo_bits/typedef.hpp                  |   11 
 inst/include/armadillo_bits/typedef_blas_int.hpp         |   11 
 inst/include/armadillo_bits/typedef_fixed.hpp            |   11 
 inst/include/armadillo_bits/undefine_conflicts.hpp       |   11 
 inst/include/armadillo_bits/unwrap.hpp                   |   15 
 inst/include/armadillo_bits/unwrap_cube.hpp              |   11 
 inst/include/armadillo_bits/unwrap_spmat.hpp             |   11 
 inst/include/armadillo_bits/upgrade_val.hpp              |   11 
 inst/include/armadillo_bits/wall_clock_bones.hpp         |   11 
 inst/include/armadillo_bits/wall_clock_meat.hpp          |   11 
 358 files changed, 2967 insertions(+), 3722 deletions(-)

More information about RcppArmadillo at CRAN
Permanent link

Package iid.test (with last version 1.13) was removed from CRAN

Previous versions (as known to CRANberries) which should be available via the Archive link are:

2011-03-01 1.13
2010-09-23 1.11
2010-08-05 1.6
2008-10-13 1.5
2007-11-21 1.3
2007-11-20 1.2
2007-09-07 1.0
2006-08-25 0.8

Permanent link
Package spikeslab (with last version 1.1.4) was removed from CRAN

Previous versions (as known to CRANberries) which should be available via the Archive link are:

2011-04-03 1.1.4
2011-02-25 1.1.3.1
2011-02-18 1.1.2.1
2010-10-29 1.1.2
2010-08-18 1.1.1
2010-06-15 1.1.0
2010-05-06 1.0.3
2010-04-27 1.0.2
2010-04-19 1.0.1
2010-03-17 1.0.0

Permanent link
Package pamctdp (with last version 0.2.3) was removed from CRAN

Previous versions (as known to CRANberries) which should be available via the Archive link are:

2010-11-05 0.2.3
2010-10-29 0.2.2
2010-08-04 0.1.8
2010-07-24 0.1.5
2010-02-16 0.1.3
2010-02-06 0.1.2

Permanent link
Package gptk (with last version 1.05) was removed from CRAN

Previous versions (as known to CRANberries) which should be available via the Archive link are:

2011-12-05 1.05
2011-11-22 1.04
2011-07-26 1.03
2011-06-17 1.02
2010-12-21 1.01
2010-12-12 1.0

Permanent link
Package replicationDemos (with last version 1.05) was removed from CRAN

Previous versions (as known to CRANberries) which should be available via the Archive link are:

2012-12-04 1.05
2012-03-17 1.00
2012-02-29 0.97

Permanent link
Package simone (with last version 1.0-1) was removed from CRAN

Previous versions (as known to CRANberries) which should be available via the Archive link are:

2011-10-26 1.0-1
2010-05-17 1.0-0
2010-01-27 0.1-4
2009-05-28 0.1-3
2009-02-23 0.1-2
2008-10-25 0.1-1

Permanent link
Package paloma (with last version 1.2.2) was removed from CRAN

Previous versions (as known to CRANberries) which should be available via the Archive link are:

2011-11-17 1.2.2
2011-08-23 1.2.1
2011-08-03 1.1

Permanent link
Package esd4all (with last version 1.0-9) was removed from CRAN

Previous versions (as known to CRANberries) which should be available via the Archive link are:

2011-02-02 1.0-9
2009-10-26 1.0-3

Permanent link
Package qqplotter (with last version 1.16) was removed from CRAN

Previous versions (as known to CRANberries) which should be available via the Archive link are:

2012-03-15 1.16
2011-10-15 1.11

Permanent link
Package spBayes updated to version 0.3-5 with previous version 0.3-4 dated 2013-02-10

Title: Univariate and Multivariate Spatial Modeling
Description: spBayes fits univariate and multivariate spatial models with Markov chain Monte Carlo (MCMC).
Author: Andrew O. Finley , Sudipto Banerjee
Maintainer: Andrew O. Finley

Diff between spBayes versions 0.3-4 dated 2013-02-10 and 0.3-5 dated 2013-03-02

 DESCRIPTION              |   11 ++-
 MD5                      |   27 +++++++--
 NAMESPACE                |    3 +
 R/bayesRegression.R      |only
 R/bayesUtilities.R       |only
 R/mkMatUtil.R            |   37 ++++++++++++-
 R/spDynLM.R              |only
 R/spPredict.R            |  133 ++++++++++++++++++++++++++++++++++++++++++++++-
 data/FBC07.dat.tab.gz    |only
 data/FORMGMT.dat.tab.gz  |only
 data/NETemp.dat.tab.gz   |only
 inst/ChangeLog           |    5 +
 man/FBC07.dat.Rd         |only
 man/FORMGMT.dat.Rd       |only
 man/NETemp.dat.Rd        |only
 man/bayesGeostatExact.Rd |only
 man/bayesLMConjugate.Rd  |only
 man/spDynLM.Rd           |only
 src/spDynLM.cpp          |only
 src/util.cpp             |   94 +++++++++++++++++++++++++++++++--
 src/util.h               |    2 
 21 files changed, 293 insertions(+), 19 deletions(-)

More information about spBayes at CRAN
Permanent link

Package glmnet updated to version 1.9-3 with previous version 1.9-1 dated 2013-02-10

Title: Lasso and elastic-net regularized generalized linear models
Description: Extremely efficient procedures for fitting the entire lasso or elastic-net regularization path for linear regression, logistic and multinomial regression models, poisson regression and the Cox model. Two recent additions are the multiresponse gaussian, and the grouped multinomial. The algorithm uses cyclical coordinate descent in a pathwise fashion, as described in the paper listed below.
Author: Jerome Friedman, Trevor Hastie, Rob Tibshirani
Maintainer: Trevor Hastie

Diff between glmnet versions 1.9-1 dated 2013-02-10 and 1.9-3 dated 2013-03-02

 glmnet-1.9-1/glmnet/inst/mortran/newmultGLMnet.m |only
 glmnet-1.9-1/glmnet/src/glmnet2.f90              |only
 glmnet-1.9-3/glmnet/ChangeLog                    |    2 +
 glmnet-1.9-3/glmnet/DESCRIPTION                  |    9 +++--
 glmnet-1.9-3/glmnet/MD5                          |   36 +++++++++++------------
 glmnet-1.9-3/glmnet/R/cv.coxnet.R                |    2 -
 glmnet-1.9-3/glmnet/R/cv.elnet.R                 |    2 -
 glmnet-1.9-3/glmnet/R/cv.fishnet.R               |    2 -
 glmnet-1.9-3/glmnet/R/cv.lognet.R                |    2 -
 glmnet-1.9-3/glmnet/R/cv.mrelnet.R               |    2 -
 glmnet-1.9-3/glmnet/R/cv.multnet.R               |    2 -
 glmnet-1.9-3/glmnet/R/elnet.R                    |    6 +--
 glmnet-1.9-3/glmnet/R/fishnet.R                  |    6 +--
 glmnet-1.9-3/glmnet/R/glmnet.R                   |   14 +++++---
 glmnet-1.9-3/glmnet/R/lognet.R                   |    6 +--
 glmnet-1.9-3/glmnet/R/mrelnet.R                  |    6 +--
 glmnet-1.9-3/glmnet/inst/doc/Coxnet.pdf          |binary
 glmnet-1.9-3/glmnet/inst/mortran/glmnet2.m       |only
 glmnet-1.9-3/glmnet/man/glmnet.Rd                |    6 ++-
 glmnet-1.9-3/glmnet/man/plot.cv.glmnet.Rd        |    2 -
 glmnet-1.9-3/glmnet/src/glmnet3.f90              |only
 21 files changed, 56 insertions(+), 49 deletions(-)

More information about glmnet at CRAN
Permanent link

Package R4dfp (with last version 0.1-9) was removed from CRAN

Previous versions (as known to CRANberries) which should be available via the Archive link are:

2010-07-31 0.1-9
2010-06-24 0.1-6
2010-06-22 0.1-5
2010-06-21 0.1-0

Permanent link
Package anchors (with last version 3.0-7) was removed from CRAN

Previous versions (as known to CRANberries) which should be available via the Archive link are:

2011-05-23 3.0-7
2011-04-24 3.0-6
2009-07-19 3.0-4

Permanent link
Package BootPR (with last version 0.58) was removed from CRAN

Previous versions (as known to CRANberries) which should be available via the Archive link are:

2009-06-24 0.58
2009-05-04 0.57
2008-06-12 0.56
2008-04-20 0.55

Permanent link
Package dma (with last version 1.1) was removed from CRAN

Previous versions (as known to CRANberries) which should be available via the Archive link are:

2012-05-15 1.1

Permanent link
Package cyclones (with last version 1.2-13) was removed from CRAN

Previous versions (as known to CRANberries) which should be available via the Archive link are:

2012-01-04 1.2-13
2011-02-17 1.2-10
2010-08-13 1.2-9
2010-04-12 1.2-8
2007-09-10 1.2-0
2007-09-07 1.1-7
2006-02-10 1.1-6

Permanent link
Package clim.pact (with last version 2.3-10) was removed from CRAN

Previous versions (as known to CRANberries) which should be available via the Archive link are:

2011-11-22 2.3-10
2011-03-26 2.3-7
2011-02-10 2.3-5
2010-12-20 2.3-2
2010-12-08 2.3-1
2010-02-08 2.2-41
2009-10-21 2.2-39
2009-06-16 2.2-38
2009-06-14 2.2-37
2009-06-03 2.2-36
2009-05-27 2.2-35
2009-04-17 2.2-34
2009-04-15 2.2-33
2009-03-26 2.2-31
2009-03-04 2.2-30
2009-02-04 2.2-29
2008-12-21 2.2-26
2008-10-25 2.2-23
2008-10-14 2.2-22
2008-08-01 2.2-15
2008-04-10 2.2-14
2008-01-10 2.2-13
2008-01-09 2.2-12
2007-09-07 2.2-9
2007-06-16 2.2-7

Permanent link
Package EcoTroph (with last version 1.4) was removed from CRAN

Previous versions (as known to CRANberries) which should be available via the Archive link are:

2012-07-09 1.4
2012-05-25 1.3
2012-02-16 1.2

Permanent link
Package PrecipStat (with last version 1.03) was removed from CRAN

Previous versions (as known to CRANberries) which should be available via the Archive link are:

2012-03-26 1.03
2011-10-14 1.00

Permanent link
Package PPtree (with last version 2.0.6) was removed from CRAN

Previous versions (as known to CRANberries) which should be available via the Archive link are:

2012-08-17 2.0.6

Permanent link
Package Bayesthresh (with last version 0.2) was removed from CRAN

Previous versions (as known to CRANberries) which should be available via the Archive link are:

2012-10-01 0.2
2012-08-16 0.1.1
2012-08-08 0.1

Permanent link

Built and running on Debian GNU/Linux using R, littler and blosxom. Styled with Bootstrap.