Title: A Lasso for Hierarchical Interactions
Diff between hierNet versions 1.2 dated 2013-03-15 and 1.3 dated 2013-06-01
Description: Fits sparse interaction models for continuous and binary
responses subject to the strong (or weak) hierarchy restriction
that an interaction between two variables only be included if
both (or at least one of) the variables is included as a main
effect. For more details, see Bien, J., Taylor, J.,
Tibshirani, R., (2012) "A Lasso for Hierarchical Interactions"
accepted for publication in Annals of Statistics.
Author: Jacob Bien and Rob Tibshirani
Maintainer: Jacob Bien
DESCRIPTION | 6 ++--
MD5 | 4 +-
R/funcs.R | 84 ++++++++++++++++++++++++++++++++++++------------------------
3 files changed, 56 insertions(+), 38 deletions(-)
Title: Univariate and Multivariate Spatial-temporal Modeling
Diff between spBayes versions 0.3-6 dated 2013-03-19 and 0.3-7 dated 2013-06-01
Description: spBayes fits univariate and multivariate spatio-temporal
models with Markov chain Monte Carlo (MCMC).
Author: Andrew O. Finley
Maintainer: Andrew O. Finley
DESCRIPTION | 8 +-
MD5 | 33 ++++----
R/spDiag.R | 7 -
R/spDynLM.R | 108 ++++++++++++++++++++++++++--
R/spLM.R | 35 ---------
R/spMvLM.R | 41 +---------
data/NYOzone.dat.tab.gz |only
inst/ChangeLog | 10 ++
man/NYOzone.dat.Rd |only
man/spDynLM.Rd | 25 ++++--
man/spLM.Rd | 3
man/spMvLM.Rd | 3
src/spDynLM.cpp | 180 +++++++++++++++++++++++-------------------------
src/spLM.cpp | 136 ++++++++----------------------------
src/spLMRecover.cpp | 97 ++++++++++++++++++++++---
src/spMvLM.cpp | 142 ++++++++-----------------------------
src/spMvLMRecover.cpp | 173 +++++++++++++++++++++++++++++++++++++---------
src/spPPDynLM.cpp |only
src/spPPMvLM.cpp | 4 -
19 files changed, 538 insertions(+), 467 deletions(-)
Title: Sean Lahman's Baseball Database
Diff between Lahman versions 2.0-1 dated 2013-04-25 and 2.0-3 dated 2013-06-01
Description: This package provides the tables from Sean Lahman's
Baseball Database as a set of R data.frames. It uses the data
on pitching, hitting and fielding performance and other tables
from 1871 through 2012, as recorded in the 2012 version of the
database.
Author: Michael Friendly and Dennis Murphy and Martin Monkman
Maintainer: Michael Friendly
DESCRIPTION | 19 +++++++-----
MD5 | 64 ++++++++++++++++++++---------------------
NEWS | 7 ++++
data/AllstarFull.RData |binary
data/Appearances.RData |binary
data/AwardsManagers.RData |binary
data/AwardsPlayers.RData |binary
data/AwardsShareManagers.RData |binary
data/AwardsSharePlayers.RData |binary
data/Batting.RData |binary
data/BattingPost.RData |binary
data/Fielding.RData |binary
data/FieldingOF.RData |binary
data/FieldingPost.RData |binary
data/HallOfFame.RData |binary
data/LahmanData.RData |binary
data/Managers.RData |binary
data/ManagersHalf.RData |binary
data/Master.RData |binary
data/Pitching.RData |binary
data/PitchingPost.RData |binary
data/Salaries.RData |binary
data/Schools.RData |binary
data/SchoolsPlayers.RData |binary
data/SeriesPost.RData |binary
data/Teams.RData |binary
data/TeamsFranchises.RData |binary
data/TeamsHalf.RData |binary
data/battingLabels.RData |binary
data/fieldingLabels.RData |binary
data/pitchingLabels.RData |binary
man/Lahman-package.Rd | 10 +++---
man/Schools.Rd | 35 +++++++++++-----------
33 files changed, 74 insertions(+), 61 deletions(-)
Title: R functions for working with spatial data.
Diff between spatial.tools versions 0.9.4 dated 2013-02-24 and 1.0.2 dated 2013-06-01
Description: Spatial functions meant to enhance the core functionality
of the package "raster", including a parallel processing engine
for use with rasters.
Author: Jonathan Asher Greenberg
Maintainer: Jonathan Asher Greenberg
DESCRIPTION | 15 +--
MD5 | 62 ++++++++-----
NAMESPACE | 33 ++++---
R/bbox_to_SpatialPolygons.R |only
R/binary_image_write.R | 5 -
R/brickstack_to_raster_list.R |only
R/fix_extent.R | 12 ++
R/focal_hpc.R | 176 +++++++++++++++++++++++---------------
R/getValuesBlock_enhanced.R | 10 +-
R/getValuesBlock_stackfix.R |only
R/get_gdal_installation.R |only
R/is.Raster.R |only
R/modify_raster_margins.R |only
R/projectRaster_rigorous.R |only
R/sfQuickInit.R | 1
R/sfQuickStop.R | 1
R/spatial_sync_raster.R | 23 +++-
R/spatial_sync_vector.R | 10 +-
R/tahoe_highrez_training_data.R | 10 +-
R/tahoe_lidar_bareearth_data.R | 3
R/tahoe_lidar_highesthit_data.R | 3
man/bbox_to_SpatialPolygons.Rd |only
man/binary_image_write.Rd | 5 -
man/brickstack_to_raster_list.Rd |only
man/fix_extent.Rd | 9 +
man/focal_hpc.Rd | 11 +-
man/getValuesBlock_enhanced.Rd | 8 +
man/getValuesBlock_stackfix.Rd |only
man/get_gdal_installation.Rd |only
man/is.Raster.Rd |only
man/modify_raster_margins.Rd |only
man/projectRaster_rigorous.Rd |only
man/sfQuickInit.Rd | 3
man/sfQuickStop.Rd | 3
man/spatial_sync_raster.Rd | 4
man/spatial_sync_vector.Rd | 10 +-
man/tahoe_highrez_training.Rd | 10 +-
man/tahoe_lidar_bareearth.tif.Rd | 3
man/tahoe_lidar_highesthit.tif.Rd | 3
39 files changed, 277 insertions(+), 156 deletions(-)
Title: Distributed Storage and List
Diff between DSL versions 0.1-2.1 dated 2013-04-25 and 0.1-3 dated 2013-06-01
Description: A package providing functions and methods for handling
distributed storage (DStorage) and lists (DLlist). It
implements an abstract DList class for storing large list-type
objects in a distributed manner. In doing so it uses a well
defined storage backend implemented based on the DStorage
class. It allows for processing such DLists on distributed
systems efficiently.
Author: Ingo Feinerer [aut], Stefan Theussl [aut, cre], Christian
Buchta [ctb]
Maintainer: Stefan Theussl
DESCRIPTION | 10 +++++-----
MD5 | 14 +++++++-------
R/map.R | 2 +-
R/storage.R | 8 ++++----
inst/doc/DSL.Rnw | 34 +++++++++++++++++++---------------
inst/doc/DSL.pdf |binary
man/map.Rd | 3 ++-
vignettes/DSL.Rnw | 34 +++++++++++++++++++---------------
8 files changed, 57 insertions(+), 48 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2009-11-04 0.0-2
Title: Relational Class Analysis
Diff between RCA versions 1.4 dated 2013-05-23 and 1.4.1 dated 2013-06-01
Description: Relational Class Analysis (RCA) is a method for detecting
heterogeneity in attitudinal data. (as described in Goldberg
A., 2011, Am. J. Soc, 116(5)) . src/ also contains the source
files of igraph-C which was written by Gabor.
Author: Amir Goldberg
Maintainer: Yuan Wang
DESCRIPTION | 8 ++---
MD5 | 19 +++++++----
configure |only
configure.in |only
configure.win |only
man/RCA-package.Rd | 4 +-
man/RCA.Rd | 75 ++++++++++-------------------------------------
man/Result.Rd | 21 +++----------
man/SampleInputMatrix.Rd | 9 +++--
src/Makevars | 1
src/Makevars.in |only
src/Makevars.win | 1
src/config.h.in |only
13 files changed, 46 insertions(+), 92 deletions(-)
Title: Read and Write SAS XPORT Files
Diff between SASxport versions 1.3.2 dated 2013-05-12 and 1.3.4 dated 2013-06-01
Description: This package provides functions for reading, listing the
contents of, and writing SAS xport format files. The functions
support reading and writing of either individual data frames or
sets of data frames. Further, a mechanism has been provided
for customizing how variables of different data types are
stored.
Author: Unless otherwise noted, the contents of this package were
written by Gregory R. Warnes
Maintainer: Gregory R. Warnes
ChangeLog | 51 +++++++++++++++++++++++++
DESCRIPTION | 8 +--
MD5 | 69 +++++++++++++++++-----------------
NEWS | 11 +++++
R/make.formats.R | 18 ++++----
inst/ChangeLog | 51 +++++++++++++++++++++++++
inst/NEWS | 11 +++++
tests/Alfalfa_Test.R | 1
tests/Alfalfa_Test.Rout.save | 7 +--
tests/Theoph.R | 1
tests/Theoph.Rout.save | 7 +--
tests/cars.R | 1
tests/cars.Rout.save | 7 +--
tests/dfAttributes.R | 1
tests/testBlockBoundary.R | 2
tests/testDates.R | 1
tests/testDates.Rout.save | 7 +--
tests/testDuplicateNames.R | 2
tests/testDuplicateNames.Rout.save | 32 +++++++--------
tests/testFactorAllNA.R |only
tests/testManyNames.R | 1
tests/testManyNames.Rout.save | 7 +--
tests/testNegative.R | 1
tests/testNegative.Rout.save | 7 +--
tests/testNumeric.R | 1
tests/testNumeric.Rout.save | 7 +--
tests/testUnnamedComponents.R | 2
tests/testUnnamedComponents.Rout.save | 64 +++++++++++++++----------------
tests/test_as_is.R | 1
tests/test_as_is.Rout.save | 7 +--
tests/test_fields.R | 1
tests/test_fields.Rout.save | 7 +--
tests/xport.R | 1
tests/xport.Rout.save | 7 +--
tests/xxx.R | 1
tests/xxx.Rout.save | 7 +--
36 files changed, 281 insertions(+), 129 deletions(-)
Title: High dimensional multiclass classification using sparse group
lasso
Diff between msgl versions 0.1.3 dated 2013-05-27 and 0.1.4 dated 2013-06-01
Description: Sparse group lasso multiclass classification, suitable for
high dimensional problems with many classes. Fast algorithm for
solving the multinomial sparse group lasso convex optimization
problem. This package apply template metaprogramming
techniques, therefore -- when compiling the package from source
-- a high level of optimization is needed to gain full speed
(e.g. for the GCC compiler use -O3). Use of multiple processors
for cross validation and subsampling is supported through
OpenMP. The Armadillo C++ library is used as the primary linear
algebra engine. Armadillo is licensed under the MPL 2.0. The
Armadillo C++ library is primarily developed at NICTA
(Australia) by Conrad Sanderson, with contributions from around
the world. Furthermore the package utilize various Boost
libraries, in particular the Tuple library by Jaakko Jarvi and
the Random library by Jens Maurer. The Boost libraries are
licensed under the Boost Software License.
Author: Martin Vincent
Maintainer: Martin Vincent
DESCRIPTION | 8 ++++----
MD5 | 6 +++---
src/include/msgl_R_interface.h | 5 +++++
src/include/sgl/interface_basic.h | 4 ++--
4 files changed, 14 insertions(+), 9 deletions(-)
Title: Time series management, analysis and interpolation for
hydrological modelling
Diff between hydroTSM versions 0.3-6 dated 2012-10-18 and 0.4-1 dated 2013-06-01
Description: S3 functions for management, analysis, interpolation and
plotting of time series used in hydrology and related
environmental sciences. In particular, this package is highly
oriented to hydrological modelling tasks. The focus of this
package has been put in providing a collection of tools useful
for the daily work of hydrologists (although an effort was made
to optimise each function as much as possible, functionality
has had priority over speed). Bugs / comments / questions /
collaboration of any kind are very welcomed, and in particular,
datasets that can be included in this package for academic
purposes.
Author: Mauricio Zambrano-Bigiarini [aut, cre]
Maintainer: Mauricio Zambrano-Bigiarini
hydroTSM-0.3-6/hydroTSM/LICENSE |only
hydroTSM-0.4-1/hydroTSM/DESCRIPTION | 17
hydroTSM-0.4-1/hydroTSM/MD5 | 171 +++---
hydroTSM-0.4-1/hydroTSM/NAMESPACE | 8
hydroTSM-0.4-1/hydroTSM/NEWS | 198 ++-----
hydroTSM-0.4-1/hydroTSM/R/annualfunction.R | 84 +--
hydroTSM-0.4-1/hydroTSM/R/daily2annual.R | 469 ++++++++---------
hydroTSM-0.4-1/hydroTSM/R/daily2monthly.R | 461 ++++++++--------
hydroTSM-0.4-1/hydroTSM/R/dip.R | 53 +
hydroTSM-0.4-1/hydroTSM/R/diy.R | 23
hydroTSM-0.4-1/hydroTSM/R/dm2seasonal.R | 89 +--
hydroTSM-0.4-1/hydroTSM/R/drawxaxis.R | 10
hydroTSM-0.4-1/hydroTSM/R/dwdays.R | 53 +
hydroTSM-0.4-1/hydroTSM/R/dwi.R | 22
hydroTSM-0.4-1/hydroTSM/R/extract.R | 32 -
hydroTSM-0.4-1/hydroTSM/R/fdc.R | 2
hydroTSM-0.4-1/hydroTSM/R/fdcu.R | 14
hydroTSM-0.4-1/hydroTSM/R/gists2spt.R | 6
hydroTSM-0.4-1/hydroTSM/R/hip.R |only
hydroTSM-0.4-1/hydroTSM/R/hydrokrige.R | 33 -
hydroTSM-0.4-1/hydroTSM/R/hydropairs.R | 20
hydroTSM-0.4-1/hydroTSM/R/hydroplot.R | 144 ++---
hydroTSM-0.4-1/hydroTSM/R/hypsometric.R | 2
hydroTSM-0.4-1/hydroTSM/R/infillxy.R | 22
hydroTSM-0.4-1/hydroTSM/R/istdx.R | 28 -
hydroTSM-0.4-1/hydroTSM/R/izoo2rzoo.R | 11
hydroTSM-0.4-1/hydroTSM/R/ma.R | 45 +
hydroTSM-0.4-1/hydroTSM/R/matrixplot.R | 8
hydroTSM-0.4-1/hydroTSM/R/mip.R | 51 +
hydroTSM-0.4-1/hydroTSM/R/monthly2annual.R | 20
hydroTSM-0.4-1/hydroTSM/R/monthlyfunction.R | 469 ++++++++---------
hydroTSM-0.4-1/hydroTSM/R/mspplot.R | 19
hydroTSM-0.4-1/hydroTSM/R/rm1stchar.R | 19
hydroTSM-0.4-1/hydroTSM/R/seasonalfunction.R | 87 +--
hydroTSM-0.4-1/hydroTSM/R/sfreq.R | 7
hydroTSM-0.4-1/hydroTSM/R/smry.R | 71 +-
hydroTSM-0.4-1/hydroTSM/R/sname2plot.R | 333 ++++++------
hydroTSM-0.4-1/hydroTSM/R/sname2ts.R | 15
hydroTSM-0.4-1/hydroTSM/R/stdx.R | 35 -
hydroTSM-0.4-1/hydroTSM/R/subdaily2annual.R |only
hydroTSM-0.4-1/hydroTSM/R/subdaily2daily.R |only
hydroTSM-0.4-1/hydroTSM/R/subdaily2monthly.R |only
hydroTSM-0.4-1/hydroTSM/R/subdaily2seasonal.R |only
hydroTSM-0.4-1/hydroTSM/R/time2season.R | 34 -
hydroTSM-0.4-1/hydroTSM/R/vector2zoo.R | 8
hydroTSM-0.4-1/hydroTSM/R/yip.R | 57 +-
hydroTSM-0.4-1/hydroTSM/WhatsNew.txt | 146 +++++
hydroTSM-0.4-1/hydroTSM/data/KarameaAtGorgeQts.RData |only
hydroTSM-0.4-1/hydroTSM/inst/doc/hydroTSM_Vignette.R |only
hydroTSM-0.4-1/hydroTSM/inst/doc/hydroTSM_Vignette.Rnw | 141 ++++-
hydroTSM-0.4-1/hydroTSM/inst/doc/hydroTSM_Vignette.pdf |binary
hydroTSM-0.4-1/hydroTSM/man/KarameaAtGorgeQts.Rd |only
hydroTSM-0.4-1/hydroTSM/man/OcaEnOnaQts.Rd | 6
hydroTSM-0.4-1/hydroTSM/man/SanMartinoPPts.Rd | 6
hydroTSM-0.4-1/hydroTSM/man/annualfunction.Rd | 14
hydroTSM-0.4-1/hydroTSM/man/daily2annual.Rd | 48 +
hydroTSM-0.4-1/hydroTSM/man/daily2monthly.Rd | 37 -
hydroTSM-0.4-1/hydroTSM/man/dip.Rd | 14
hydroTSM-0.4-1/hydroTSM/man/diy.Rd | 8
hydroTSM-0.4-1/hydroTSM/man/dm2seasonal.Rd | 47 +
hydroTSM-0.4-1/hydroTSM/man/drawxaxis.Rd | 8
hydroTSM-0.4-1/hydroTSM/man/dwdays.Rd | 14
hydroTSM-0.4-1/hydroTSM/man/dwi.Rd | 8
hydroTSM-0.4-1/hydroTSM/man/extract.Rd | 8
hydroTSM-0.4-1/hydroTSM/man/fdc.Rd | 34 -
hydroTSM-0.4-1/hydroTSM/man/fdcu.Rd | 2
hydroTSM-0.4-1/hydroTSM/man/gists2spt.Rd | 8
hydroTSM-0.4-1/hydroTSM/man/hip.Rd |only
hydroTSM-0.4-1/hydroTSM/man/hydroTSM-package.Rd | 16
hydroTSM-0.4-1/hydroTSM/man/hydrokrige.Rd | 12
hydroTSM-0.4-1/hydroTSM/man/hydropairs.Rd | 8
hydroTSM-0.4-1/hydroTSM/man/hydroplot.Rd | 46 +
hydroTSM-0.4-1/hydroTSM/man/hypsometric.Rd | 4
hydroTSM-0.4-1/hydroTSM/man/infillxy.Rd | 8
hydroTSM-0.4-1/hydroTSM/man/istdx.Rd | 8
hydroTSM-0.4-1/hydroTSM/man/izoo2rzoo.Rd | 8
hydroTSM-0.4-1/hydroTSM/man/ma.Rd | 8
hydroTSM-0.4-1/hydroTSM/man/matrixplot.Rd | 8
hydroTSM-0.4-1/hydroTSM/man/mip.Rd | 12
hydroTSM-0.4-1/hydroTSM/man/monthlyfunction.Rd | 18
hydroTSM-0.4-1/hydroTSM/man/mspplot.Rd | 9
hydroTSM-0.4-1/hydroTSM/man/rm1stchar.Rd | 8
hydroTSM-0.4-1/hydroTSM/man/seasonalfunction.Rd | 14
hydroTSM-0.4-1/hydroTSM/man/sfreq.Rd | 4
hydroTSM-0.4-1/hydroTSM/man/smry.Rd | 8
hydroTSM-0.4-1/hydroTSM/man/sname2ts.Rd | 12
hydroTSM-0.4-1/hydroTSM/man/stdx.Rd | 8
hydroTSM-0.4-1/hydroTSM/man/subdaily2daily.Rd |only
hydroTSM-0.4-1/hydroTSM/man/time2season.Rd | 12
hydroTSM-0.4-1/hydroTSM/man/vector2zoo.Rd | 8
hydroTSM-0.4-1/hydroTSM/man/yip.Rd | 14
hydroTSM-0.4-1/hydroTSM/man/zoo2RHtest.Rd | 18
92 files changed, 2421 insertions(+), 1649 deletions(-)
Title: HTTP and WebSocket server library
Diff between httpuv versions 1.0.5 dated 2013-03-11 and 1.0.6.3 dated 2013-06-01
Description: httpuv provides low-level socket and protocol support for
handling HTTP and WebSocket requests directly from within R. It
is primarily intended as a building block for other packages,
rather than making it particularly easy to create complete web
applications using httpuv alone. httpuv is built on top of the
libuv and http-parser C libraries, both of which were developed
by Joyent, Inc. (See LICENSE file for libuv and http-parser
license information.)
Author: RStudio, Inc.
Maintainer: Joe Cheng
DESCRIPTION | 11 ++---
LICENSE | 4 +
MD5 | 32 +++++++-------
NAMESPACE | 1
NEWS |only
R/RcppExports.R | 8 ++-
R/httpuv.R | 73 +++++++++++++++++++++++++++------
configure |only
man/WebSocket.Rd | 6 ++
man/startServer.Rd | 37 ++++++++++++++---
src/RcppExports.cpp | 25 +++++++++--
src/http.cpp | 112 ++++++++++++++++++++++++++++++++++------------------
src/http.h | 28 +++++++++----
src/httpuv.cpp | 74 +++++++++++++++++++---------------
src/sha1/sha1.c | 26 ++++++------
src/sha1/sha1.h | 6 +-
src/websockets.cpp | 28 ++++---------
src/websockets.h | 2
18 files changed, 313 insertions(+), 160 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2012-11-05 1.0