Title: circos layout in R
Diff between circlize versions 0.0.2 dated 2013-05-26 and 0.0.3 dated 2013-06-02
Description: circlize is an R package which implements circos layout
(http://circos.ca/) in R. It can do almost everything that
circos can do. And due to the natural born feature of drawing
statistical graphics in R, this package can provide a more
flexible way to visualize information in a circular style.
Author: Zuguang Gu
Maintainer: Zuguang Gu
CHANGES | 13
DESCRIPTION | 12
MD5 | 81 +-
NAMESPACE | 2
R/global.R | 256 +++---
R/link.R |only
R/overview.R | 31
R/plot.R | 464 +++++------
R/utils.R | 161 ----
inst/doc/circlize.R | 1401 ++++++++++++++++++++++-------------
inst/doc/circlize.Rnw | 833 +++++++++++---------
inst/doc/circlize.pdf |binary
inst/doc/draw-ideogram.R | 690 +++++++++++------
inst/doc/draw-ideogram.Rnw | 522 +++++--------
inst/doc/draw-ideogram.pdf |binary
inst/doc/draw-relations.R | 279 +++---
inst/doc/draw-relations.Rnw | 135 +--
inst/doc/draw-relations.pdf |binary
inst/doc/interesting-graphics.R | 262 +++---
inst/doc/interesting-graphics.Rnw | 98 +-
inst/doc/interesting-graphics.pdf |binary
man/circlize.rd | 85 +-
man/circos.axis.rd | 26
man/circos.clear.rd | 6
man/circos.initialize.rd | 4
man/circos.initializeWithIdeogram.rd | 67 -
man/circos.lines.rd | 30
man/circos.link.rd | 37
man/circos.par.rd | 27
man/circos.points.rd | 4
man/circos.polygon.rd | 2
man/circos.rect.rd | 5
man/circos.text.rd | 26
man/circos.trackHist.rd | 22
man/circos.trackLines.rd | 14
man/circos.trackPlotRegion.rd | 10
man/circos.trackPoints.rd | 8
man/circos.trackText.rd | 9
man/circos.updatePlotRegion.rd | 2
man/draw.sector.rd | 69 +
man/get.cell.meta.data.rd | 18
man/show.index.rd | 10
42 files changed, 3186 insertions(+), 2535 deletions(-)
Title: Classes for Spatial Data
Diff between ngspatial versions 0.5-2 dated 2012-12-09 and 1.0 dated 2013-06-02
Description: ngspatial provides tools for analyzing spatial data,
especially non-Gaussian areal data.
Author: John Hughes
Maintainer: John Hughes
COPYING | 2
DESCRIPTION | 11
MD5 | 34 -
R/autologistic.R | 941 ++++++++++++++++++++++++++++----------------
R/misc.R | 46 --
R/moller.R | 67 +--
R/sparse.sglmm.R | 682 ++++++++++++++++++-------------
R/zzz.R | 8
inst/CITATION | 1
man/autologistic.Rd | 206 +++++----
man/rautologistic.Rd | 44 +-
man/sparse.sglmm.Rd | 70 ++-
man/summary.autologistic.Rd | 15
man/summary.sparse.sglmm.Rd | 13
man/vcov.autologistic.Rd | 3
src/moller.cpp | 194 ++++-----
src/moller.h | 11
src/perfsampler.cpp | 38 -
18 files changed, 1407 insertions(+), 979 deletions(-)