Sun, 15 Sep 2013

Package yhat updated to version 2.0-0 with previous version 1.0-5 dated 2012-07-26

Title: Interpreting Regression Effects
Description: The purpose of this package is to provide methods to interpret multiple linear regression and canonical correlation results including beta weights,structure coefficients, validity coefficients, product measures, relative weights, all-possible-subsets regression, dominance analysis, commonality analysis, and adjusted effect sizes.
Author: Kim Nimon , Fred Oswald, and J. Kyle Roberts.
Maintainer: Kim Nimon

Diff between yhat versions 1.0-5 dated 2012-07-26 and 2.0-0 dated 2013-09-15

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Package R.methodsS3 updated to version 1.5.1 with previous version 1.5.0 dated 2013-09-12

Title: Utility function for defining S3 methods
Description: Methods that simplify the setup of S3 generic functions and S3 methods. Major effort has been made in making definition of methods as simple as possible with a minimum of maintenance for package developers. For example, generic functions are created automatically, if missing, and naming conflict are automatically solved, if possible. The method setMethodS3() is a good start for those who in the future may want to migrate to S4. This is a cross-platform package implemented in pure R that generates standard S3 methods.
Author: Henrik Bengtsson
Maintainer: Henrik Bengtsson

Diff between R.methodsS3 versions 1.5.0 dated 2013-09-12 and 1.5.1 dated 2013-09-15

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Package gRain updated to version 1.2-2 with previous version 1.2-1 dated 2013-08-08

Title: Graphical Independence Networks
Description: A package for probability propagation in graphical independence networks, also known as probabilistic expert systems or Bayesian networks.
Author: Søren Højsgaard
Maintainer: Søren Højsgaard

Diff between gRain versions 1.2-1 dated 2013-08-08 and 1.2-2 dated 2013-09-15

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Package dosresmeta updated to version 1.1 with previous version 1.0 dated 2013-09-09

Title: Performing dose-response meta-analysis
Description: It allows to estimate a dose-response relation from single and multiple summarized data. The trend estimation takes into account the correlation among log relative risks and use it to efficiently estimate the dose-response relation for each study included in the analysis. The results are then combined according to principles of multivariate random effects meta-analysis to obtain a pooled functional relation.
Author: Alessio Crippa
Maintainer: Alessio Crippa

Diff between dosresmeta versions 1.0 dated 2013-09-09 and 1.1 dated 2013-09-15

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Package TAM updated to version 0.7-35 with previous version 0.6-26 dated 2013-08-28

Title: Test Analysis Modules
Description: The package includes marginal and joint maximum likelihood estimation of uni- and multidimensional item response models (Rasch, 2PL, Generalized Partial Credit, Rating Scale, Multi Facets), fit statistics, standard error estimation, as well as plausible value imputation and weighted likelihood estimation of ability.
Author: Thomas Kiefer, Alexander Robitzsch, Margaret Wu
Maintainer: Alexander Robitzsch

Diff between TAM versions 0.6-26 dated 2013-08-28 and 0.7-35 dated 2013-09-15

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Package RProtoBuf updated to version 0.3.1 with previous version 0.3 dated 2013-07-15

Title: R Interface to the Protocol Buffers API
Description: Protocol Buffers are a way of encoding structured data in an efficient yet extensible format. Google uses Protocol Buffers for almost all of its internal RPC protocols and file formats.
Author: Romain Francois, Dirk Eddelbuettel and Murray Stokely
Maintainer: Dirk Eddelbuettel

Diff between RProtoBuf versions 0.3 dated 2013-07-15 and 0.3.1 dated 2013-09-15

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Package forensim updated to version 4.3 with previous version 4.1 dated 2013-05-05

Title: Statistical tools for the interpretation of forensic DNA mixtures
Description: Statistical methods and simulation tools for the interpretation of forensic DNA mixtures
Author: Hinda Haned
Maintainer: Hinda Haned

Diff between forensim versions 4.1 dated 2013-05-05 and 4.3 dated 2013-09-15

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Package osmar updated to version 1.1-6 with previous version 1.1-5 dated 2012-09-12

Title: OpenStreetMap and R
Description: This package provides infrastructure to access OpenStreetMap data from different sources, to work with the data in common R manner, and to convert data into available infrastructure provided by existing R packages (e.g., into sp and igraph objects).
Author: Thomas Schlesinger and Manuel J. A. Eugster
Maintainer: Thomas Schlesinger

Diff between osmar versions 1.1-5 dated 2012-09-12 and 1.1-6 dated 2013-09-15

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Package R.utils updated to version 1.27.1 with previous version 1.26.2 dated 2013-07-30

Title: Various programming utilities
Description: This package provides utility methods useful when programming and developing R packages.
Author: Henrik Bengtsson
Maintainer: Henrik Bengtsson

Diff between R.utils versions 1.26.2 dated 2013-07-30 and 1.27.1 dated 2013-09-15

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Package pracma updated to version 1.5.5 with previous version 1.5.0 dated 2013-08-09

Title: Practical Numerical Math Functions
Description: Functions from numerical analysis and linear algebra, numerical optimization, differential equations, plus some special functions. Uses Matlab function names where appropriate to simplify porting.
Author: Hans W Borchers
Maintainer: HwB

Diff between pracma versions 1.5.0 dated 2013-08-09 and 1.5.5 dated 2013-09-15

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Package longitudinal updated to version 1.1.8 with previous version 1.1.7 dated 2012-01-22

Title: Analysis of Multiple Time Course Data
Description: This package contains general data structures and functions for longitudinal data with multiple variables, repeated measurements, and irregularly spaced time points. It also implements a shrinkage estimator of dynamical correlation and dynamical covariance.
Author: Rainer Opgen-Rhein and Korbinian Strimmer.
Maintainer: Korbinian Strimmer

Diff between longitudinal versions 1.1.7 dated 2012-01-22 and 1.1.8 dated 2013-09-15

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New package GPCSIV with initial version 0.1.0
Package: GPCSIV
Type: Package
Title: GPCSIV, Generalized Principal Component of Symbolic Interval variables
Version: 0.1.0
Date: 2013-06-06
Author: Brahim Brahim and Sun Makosso-Kallyth
Maintainer: Brahim Brahim
Description: This package implements an extension of principal component analysis (PCA) tailored to handle multiple data tables. It can handle Big Data in the sense that the variation in massive data can be described by intervals [a, b] and multiple tables.
License: GPL (>= 2)
Depends: scatterplot3d, sqldf
Packaged: 2013-09-14 19:01:48 UTC; PSA
NeedsCompilation: no
Repository: CRAN
Date/Publication: 2013-09-15 09:53:08

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Package GeneNet updated to version 1.2.8 with previous version 1.2.7 dated 2013-06-16

Title: Modeling and Inferring Gene Networks
Description: GeneNet is a package for analyzing gene expression (time series) data with focus on the inference of gene networks. In particular, GeneNet implements the methods of Schaefer and Strimmer (2005a,b,c) and Opgen-Rhein and Strimmer (2006, 2007) for learning large-scale gene association networks (including assignment of putative directions).
Author: Juliane Schaefer, Rainer Opgen-Rhein, and Korbinian Strimmer.
Maintainer: Korbinian Strimmer

Diff between GeneNet versions 1.2.7 dated 2013-06-16 and 1.2.8 dated 2013-09-15

 DESCRIPTION         |   27 ++++++++++++++-------------
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Package fdrtool updated to version 1.2.11 with previous version 1.2.10 dated 2012-07-25

Title: Estimation of (Local) False Discovery Rates and Higher Criticism
Description: This package allows to estimate both tail area-based false discovery rates (Fdr) as well as local false discovery rates (fdr) for a variety of null models (p-values, z-scores, correlation coefficients, t-scores). The proportion of null values and the parameters of the null distribution are adaptively estimated from the data. In addition, the package contains functions for non-parametric density estimation (Grenander estimator), for monotone regression (isotonic regression and antitonic regression with weights), for computing the greatest convex minorant (GCM) and the least concave majorant (LCM), for the half-normal and correlation distributions, and for computing empirical higher criticism (HC) scores and the corresponding decision threshold.
Author: Bernd Klaus and Korbinian Strimmer.
Maintainer: Korbinian Strimmer

Diff between fdrtool versions 1.2.10 dated 2012-07-25 and 1.2.11 dated 2013-09-15

 fdrtool-1.2.10/fdrtool/LICENSE                   |only
 fdrtool-1.2.11/fdrtool/DESCRIPTION               |   34 ++++++++++-------------
 fdrtool-1.2.11/fdrtool/MD5                       |   13 ++++----
 fdrtool-1.2.11/fdrtool/NEWS                      |    8 +++++
 fdrtool-1.2.11/fdrtool/R/fdrtool.R               |    7 ++--
 fdrtool-1.2.11/fdrtool/man/fdrtool.Rd            |    6 ++--
 fdrtool-1.2.11/fdrtool/man/hc.score.Rd           |    4 +-
 fdrtool-1.2.11/fdrtool/man/pval.estimate.eta0.Rd |    5 ++-
 8 files changed, 42 insertions(+), 35 deletions(-)

More information about fdrtool at CRAN
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Package care updated to version 1.1.3 with previous version 1.1.2 dated 2012-01-22

Title: High-Dimensional Regression and CAR Score Variable Selection
Description: The "care" package implements the regression approach of Zuber and Strimmer (2011) "High-dimensional regression and variable selection using CAR scores" SAGMB 10: 34. CAR scores measure the correlation between the response and the Mahalanobis-decorrelated predictors. The squared CAR score is a natural measure of variable importance and provides a canonical ordering of variables. This package provides functions for estimating CAR scores, for variable selection using CAR scores, and for estimating corresponding regression coefficients. Both shrinkage as well as empirical estimators are available.
Author: Verena Zuber and Korbinian Strimmer.
Maintainer: Korbinian Strimmer

Diff between care versions 1.1.2 dated 2012-01-22 and 1.1.3 dated 2013-09-15

 care-1.1.2/care/LICENSE     |only
 care-1.1.3/care/DESCRIPTION |   32 ++++++++++++++++----------------
 care-1.1.3/care/MD5         |    5 ++---
 care-1.1.3/care/NEWS        |    8 +++++++-
 4 files changed, 25 insertions(+), 20 deletions(-)

More information about care at CRAN
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