Title: Access to Twitter Streaming API via R
Description: This package provides a series of functions that allow R users
to access Twitter's filter, sample, and user streams, and to
parse the output into data frames.
Author: Pablo Barbera
Maintainer: Pablo Barbera
Diff between streamR versions 0.1 dated 2013-01-19 and 0.2 dated 2014-01-05
ChangeLog |only DESCRIPTION | 19 +-- MD5 | 27 +++-- NAMESPACE | 2 R/filterStream.R | 233 ++++++++++++++++++++++++------------------------- R/parseTweets.R | 200 ++++++++++++++++++++++-------------------- R/readTweets.R |only R/sampleStream.R | 156 ++++++++++++++++---------------- R/streamR-package.R | 6 - R/userStream.R | 134 ++++++++++++++++++---------- man/filterStream.Rd | 97 ++++++++++++-------- man/parseTweets.Rd | 10 +- man/readTweets.Rd |only man/sampleStream.Rd | 42 +++++--- man/streamR-package.Rd | 6 - man/userStream.Rd | 62 ++++++++----- 16 files changed, 556 insertions(+), 438 deletions(-)
Title: Utility function for defining S3 methods
Description: Methods that simplify the setup of S3 generic functions and S3 methods. Major effort has been made in making definition of methods as simple as possible with a minimum of maintenance for package developers. For example, generic functions are created automatically, if missing, and naming conflict are automatically solved, if possible. The method setMethodS3() is a good start for those who in the future may want to migrate to S4. This is a cross-platform package implemented in pure R that generates standard S3 methods.
Author: Henrik Bengtsson [aut, cre, cph]
Maintainer: Henrik Bengtsson
Diff between R.methodsS3 versions 1.5.2 dated 2013-10-08 and 1.6.1 dated 2014-01-05
DESCRIPTION | 8 ++++---- MD5 | 10 +++++----- R/010.setGenericS3.R | 36 ++++++++++++++++++++++++++++++------ R/030.setMethodS3.R | 18 ++++++++++++++++++ inst/NEWS | 22 +++++++++++++++++++--- man/setGenericS3.Rd | 5 +---- 6 files changed, 77 insertions(+), 22 deletions(-)
Title: Multivariate Response Generalized Linear Models
Description: The package provides functions that (1) fit multivariate discrete distributions, (2) generate random numbers from multivariate discrete distributions, and (3) run regression and penalized regression on the multivariate categorical response data. Implemented models include: multinomial logit model, Dirichlet multinomial model, generalized Dirichlet multinomial model, and negative multinomial model. Making the best of the minorization-maximization (MM) algorithm and Newton-Raphson method, we derive and implement stable and efficient algorithms to find the maximum likelihood estimates. On a multi-core machine, multi-threading is supported.
Author: Yiwen Zhang
Maintainer: Yiwen Zhang
Diff between MGLM versions 0.0.2 dated 2013-11-07 and 0.0.3 dated 2014-01-05
DESCRIPTION | 8 ++++---- MD5 | 8 +++++--- R/MGLMfit.R | 14 +++++++++----- R/MGLMreg.R | 4 +--- build |only inst/doc/Vignette.R |only 6 files changed, 19 insertions(+), 15 deletions(-)
Title: Seismic Time Series Analysis Tools
Description: Multiple interactive codes to view and analyze seismic data, via spectrum analysis, wavelet transforms, particle motion, hodograms. Includes general time-series tools, plotting, filtering, interactive display.
Author: Jonathan M. Lees
Maintainer: Jonathan M. Lees
Diff between RSEIS versions 3.2-5 dated 2013-11-06 and 3.3-3 dated 2014-01-05
DESCRIPTION | 9 +- MD5 | 132 +++++++++++++++++++++---------------------- NAMESPACE | 5 + NEWS | 6 + R/BUTREPLOT.R | 6 - R/DOsgram.R | 2 R/GAZI.R | 4 - R/JGRAY.R | 2 R/LocalUnwrap.R | 2 R/MTM.drive.R | 159 +++++++++++++++++++++++++++++++--------------------- R/MTMplot.R | 8 +- R/PICK.DOC.R | 6 - R/PLOT.ALLPX.R | 8 +- R/PLOT.MATN.R | 4 - R/PLOT.SEISN.R | 4 - R/PLOT.TTCURVE.R | 4 - R/PMOT.drive.R | 36 +++++------ R/SELBUT.R | 28 ++++----- R/SELSTA.R | 12 +-- R/SNET.drive.R | 26 ++++---- R/SPECT.drive.R | 32 +++++----- R/ZOOM.SEISN.R | 8 +- R/addpoints.hodo.R | 20 +++--- R/blankevol.R | 16 ++--- R/choosfilt.R | 2 R/circ.R | 2 R/complex.hodo.R | 28 ++++----- R/contwlet.R | 12 +-- R/detail.pick.R | 10 +-- R/doGABOR.AR.R | 2 R/doGABOR.MTM.R | 2 R/evolfft.R | 5 - R/ghstamp.R |only R/hodogram.R | 28 ++++----- R/idpoints.hodo.R | 12 +-- R/longfft.R | 4 - R/longpstart.R | 2 R/plotevol.R | 14 ++-- R/plotevol2.R | 16 ++--- R/plotseis24.R | 4 - R/plotwlet.R | 75 ++++++++++++++++++------ R/plt.MTM0.R | 12 +-- R/pwlet2freqs.R | 5 - R/rdistaz.R | 12 +-- R/selAPX.R | 2 R/selpgen.R | 4 - R/swig.ALLPX.R | 4 - R/swig.R | 30 ++++----- R/symshot1.R | 2 R/varsquig.R | 12 +-- R/wigFUNCS.R | 10 ++- R/wlet.do.R | 4 - R/wlet.drive.R | 30 ++++----- data/CE1.RData |binary data/GH.RData |binary data/KH.RData |binary data/OH.RData |binary data/VELMOD1D.RData |binary demo/COSO.R | 7 +- demo/REVENT.R | 5 - demo/SUNrs.R | 9 +- man/evolfft.Rd | 10 ++- man/ghstamp.Rd |only man/jitter.lab.Rd | 4 - man/plotwlet.Rd | 7 +- man/plt.MTM0.Rd | 4 - man/sigconv.Rd | 2 man/wlet.do.Rd | 13 +++- 68 files changed, 530 insertions(+), 415 deletions(-)
Title: Access to Facebook API via R
Description: Provides an interface to the Facebook API
Author: Pablo Barbera
Maintainer: Pablo Barbera
Diff between Rfacebook versions 0.2 dated 2013-11-16 and 0.3 dated 2014-01-05
ChangeLog | 17 ++++++++++- DESCRIPTION | 11 +++---- MD5 | 42 +++++++++++++++------------ NAMESPACE | 3 + R/fbOAuth.R | 13 ++++++-- R/getCheckins.R |only R/getFriends.R | 4 +- R/getLikes.R |only R/getNetwork.R | 2 - R/getNewsfeed.R |only R/getPage.R | 3 + R/getPost.R | 52 ++++++++++++++++++++-------------- R/searchFacebook.R | 5 +-- R/updateStatus.R | 14 +++++++-- R/utils.R | 76 ++++++++++++++++++++++++++++++++++++++++++++++++-- man/fbOAuth.Rd | 27 +++++++++++------ man/getCheckins.Rd |only man/getFriends.Rd | 5 +-- man/getLikes.Rd |only man/getNetwork.Rd | 15 +++++---- man/getNewsfeed.Rd |only man/getPost.Rd | 11 +++++-- man/getUsers.Rd | 2 - man/searchFacebook.Rd | 13 +++----- man/updateStatus.Rd | 7 +++- 25 files changed, 230 insertions(+), 92 deletions(-)
Title: RClimMAWGEN (R Climate Index Multi-site Auto-regressive Weather
GENeretor): a package to generate time series of climate
indices from RMAWGEN generations.
Description: This package contains wrapper functions and methods which allow to
use "climdex.pcic" and "RMAWGEN" packages. With this simple approach it is
possible to calculate climate change indices, suggested by the WMO-CCL,
CLIVAR, ETCCDMI(http://www.climdex.org),on stochastic generations of
temperature and precipitation time series, obtained by the application of
RMAWGEN. Each index can be applied to both observed data and to synthetic
time series produced by the Weather Generator, over a reference period
(e.g. 1981-2010, as in the example). It contains also functions and methods
to evaluate the generated time series of climate change indices consistency
by statistical tests.Bugs/comments/questions/collaboration of any kind are
warmly welcomed.
Author: Emanuele Cordano, Annalisa Di Piazza
Maintainer: Emanuele Cordano
Diff between RClimMAWGEN versions 1.0 dated 2013-02-25 and 1.1 dated 2014-01-05
RClimMAWGEN-1.0/RClimMAWGEN/R/clindex.data.frame.R |only RClimMAWGEN-1.1/RClimMAWGEN/DESCRIPTION | 35 ++++------ RClimMAWGEN-1.1/RClimMAWGEN/MD5 | 18 ++--- RClimMAWGEN-1.1/RClimMAWGEN/NAMESPACE | 2 RClimMAWGEN-1.1/RClimMAWGEN/R/RClimMAWGEN-package.R | 4 - RClimMAWGEN-1.1/RClimMAWGEN/R/climdex.data.frame.R |only RClimMAWGEN-1.1/RClimMAWGEN/data/generation_p1.rda |binary RClimMAWGEN-1.1/RClimMAWGEN/data/trentino_1958_2010.rda |binary RClimMAWGEN-1.1/RClimMAWGEN/man/RClimMAWGEN-package.Rd | 2 RClimMAWGEN-1.1/RClimMAWGEN/man/climdex.data.frame.Rd | 55 ++++++++++++---- RClimMAWGEN-1.1/RClimMAWGEN/man/generation_p1.Rd | 5 + 11 files changed, 78 insertions(+), 43 deletions(-)
Title: Functions for Aster Book on Inverse Theory
Description: Several Functions for Aster Book on Inverse Theory. These functions are translations of MATLAB code developed by the authors to illustrate the concepts of Inverse theory as applied to geophysics. There is one function, rlsqr, written by Keehoon Kim, that is a wrapper for the FORTRAN based Paige and Saunders LSQR routine.
Author: Jonathan M. Lees
Maintainer: Jonathan M. Lees
Diff between PEIP versions 1.2 dated 2012-05-19 and 1.6 dated 2014-01-05
DESCRIPTION | 17 ++++++++--------- MD5 | 34 +++++++++++++++++++--------------- NAMESPACE | 5 +++-- R/USV.R | 8 +++++--- R/bartl.R | 2 +- R/bayes.R | 6 +++--- R/blf2.R | 20 ++++++++++---------- R/cgls.R | 2 +- R/get_l_rough.R | 6 +++--- R/irlsl1reg.R | 2 +- R/loadMAT.R | 4 ++-- R/occam.R | 8 ++++---- R/rlsqr.R |only man/PEIP-package.Rd | 4 ++-- man/USV.Rd | 10 +++++++--- man/interp2grid.Rd | 4 +++- man/loadMAT.Rd | 5 +++-- man/rlsqr.Rd |only src/raprod.f |only src/rlsqr.f |only 20 files changed, 75 insertions(+), 62 deletions(-)
Title: Methods that apply to rows and columns of a matrix
Description: This packages provides methods operating on rows and columns of matrices, e.g. col/rowMedians() and col/rowRanks(). There are also some vector-based methods, e.g. anyMissing(), weightedMedians(), and binMeans(). The objective is to have all methods being optimized for speed and memory.
Author: Henrik Bengtsson [aut, cre, cph], Hector Corrada Bravo [ctb], Robert Gentleman [ctb], Ola Hossjer [ctb], Harris Jaffee [ctb], Peter Langfelder [ctb]
Maintainer: Henrik Bengtsson
Diff between matrixStats versions 0.8.12 dated 2013-09-27 and 0.8.14 dated 2014-01-05
DESCRIPTION | 10 MD5 | 44 +-- R/binCounts.R | 33 ++ R/binMeans.R | 20 + R/rowAvgsPerColSet.R | 7 R/rowCollapse.R | 4 R/rowCounts.R | 2 R/rowProds.R | 8 R/rowWeightedMeans.matrix.R | 18 + R/rowWeightedMedians.matrix.R | 6 R/sdDiff.R | 6 R/varDiff.R | 6 R/weightedMad.R | 7 R/weightedMedian.R | 17 + inst/NEWS | 566 +++++++++++++++++++++-------------------- man/binCounts.Rd | 21 + man/binMeans.Rd | 9 man/matrixStats-package.Rd | 2 src/binCounts-BINBY-template.h |only src/binCounts.c | 72 +---- src/binMeans-BINBY-template.h |only src/binMeans.c | 95 +----- tests/binCounts,benchmark.R | 24 + tests/binMeans,binCounts.R | 5 24 files changed, 525 insertions(+), 457 deletions(-)
Title: Topographic and Geologic Mapping
Description: Set of routines for making Map Projections (forward and inverse), Topographic Maps, Perspective plots, Geological Maps, geological map symbols, geological databases, interactive plotting and selection of focus regions.
Author: Jonathan M. Lees
Maintainer: Jonathan M. Lees
Diff between GEOmap versions 2.1 dated 2013-03-30 and 2.2-2 dated 2014-01-05
DESCRIPTION | 18 ++--- MD5 | 176 +++++++++++++++++++++++++------------------------- NAMESPACE | 3 R/BASICTOPOMAP.R | 2 R/ExplodeSymbols.R | 46 ++++++------- R/GEOTOPO.R | 2 R/GEOmap.limit.R | 10 +- R/GEOsymbols.R | 6 - R/GETXprofile.R | 12 +-- R/KINOUT.R | 2 R/LLlabel.R | 2 R/LOCPOLIMAP.R | 2 R/LandSeaCol.R | 10 +- R/NSarrow.R | 2 R/SELGEOmap.R | 10 +- R/SETPOLIMAP.R | 12 +-- R/TOPOCOL.R | 2 R/XSECDEMg.R | 14 +-- R/XSECEQ.R | 14 +-- R/XSECwin.R | 16 ++-- R/addLLXY.R | 2 R/boundGEOmap.R | 10 +- R/distaz.R | 12 +-- R/equid.cyl.xy.R | 4 - R/fixCoastwrap.R | 4 - R/geoLEGEND.R | 2 R/geoarea.R | 4 - R/inpoly.R | 4 - R/lambert.cc.xy.R | 2 R/lambert.ea.xy.R | 2 R/locworld.R | 4 - R/mapTeleSeis.R | 10 +- R/maplim.R | 2 R/merc.sphr.xy.R | 4 - R/normalfault.R | 2 R/plotGEOmap.R | 28 +++---- R/plotGEOmapXY.R | 22 +++--- R/plotUTM.R | 8 +- R/plotworldmap.R | 34 ++++----- R/polyintern.R | 4 - R/rose.R | 2 R/setPROJ.R | 2 R/sqrTICXY.R | 8 +- R/stereo.sphr.xy.R | 2 R/subsetTOPO.R | 6 - R/targetLL.R | 3 R/utm.wgs84.xy.R | 4 - R/utmbox.R | 2 build |only data/EHB.LLZ.RData |binary data/NSWath.RData |binary data/coastmap.RData |binary inst/doc/GEOmap.R |only man/BASICTOPOMAP.Rd | 9 +- man/GEOmap-package.Rd | 13 --- man/GLOBE.ORTH.Rd | 10 +- man/GlobeView.Rd | 9 +- man/KINOUT.Rd | 2 man/LandSeaCol.Rd | 25 ++++--- man/NSarrow.Rd | 3 man/NoOverlap.Rd | 2 man/OverTurned.Rd | 3 man/SSfault.Rd | 3 man/SynAnticline.Rd | 3 man/TOPOCOL.Rd | 6 + man/XSECEQ.Rd | 12 +-- man/XSECwin.Rd | 11 +-- man/addLLXY.Rd | 7 + man/addTIX.Rd | 4 - man/geoLEGEND.Rd | 10 +- man/getgreatarc.Rd | 2 man/insideGEOmapXY.Rd | 2 man/mapTeleSeis.Rd | 2 man/maplim.Rd | 1 man/maps2GEOmap.Rd | 9 +- man/plotGEOmap.Rd | 12 ++- man/plotGEOmapXY.Rd | 21 +++-- man/plotUTM.Rd | 12 ++- man/plothypos.Rd | 1 man/plotnicetix.Rd | 3 man/plotworldmap.Rd | 3 man/polyintern.Rd | 6 + man/rose.Rd | 4 - man/rotateGEOmap.Rd | 6 + man/rotmat2D.Rd | 2 man/setPROJ.Rd | 7 + man/sizelegend.Rd | 4 - man/sqrTICXY.Rd | 5 + man/zebra.Rd | 6 + vignettes/GEOmap.Rnw | 120 +++++++++++++++++----------------- 90 files changed, 493 insertions(+), 421 deletions(-)
Title: Functions for medical statistics book with some demographic data
Description: Several utility functions for the book entitled
"Practices of Medical and Health Data Analysis using R"
(Pearson Education Japan, 2007) with Japanese demographic
data and some demographic analysis related functions.
Author: Minato Nakazawa
Maintainer: Minato Nakazawa
Diff between fmsb versions 0.4.1 dated 2013-07-02 and 0.4.2 dated 2014-01-05
DESCRIPTION | 16 ++++++++-------- MD5 | 8 ++++---- NEWS | 10 +++++++--- R/demogjpn.R | 36 ++++++++++++++++++------------------ man/Jvital.Rd | 5 +++-- 5 files changed, 40 insertions(+), 35 deletions(-)
Title: CRAN Task Views
Description: Server-side and client-side tools for task views
to CRAN-style repositories
Author: Achim Zeileis [aut, cre],
Kurt Hornik [aut]
Maintainer: Achim Zeileis
Diff between ctv versions 0.7-8 dated 2013-04-12 and 0.7-9 dated 2014-01-05
ctv-0.7-8/ctv/WISHLIST |only ctv-0.7-9/ctv/DESCRIPTION | 23 ctv-0.7-9/ctv/MD5 | 76 - ctv-0.7-9/ctv/NEWS | 5 ctv-0.7-9/ctv/R/ctv-server.R | 2 ctv-0.7-9/ctv/build |only ctv-0.7-9/ctv/inst/ctv/Bayesian.ctv | 43 ctv-0.7-9/ctv/inst/ctv/ChemPhys.ctv | 67 - ctv-0.7-9/ctv/inst/ctv/ClinicalTrials.ctv | 7 ctv-0.7-9/ctv/inst/ctv/Cluster.ctv | 84 - ctv-0.7-9/ctv/inst/ctv/DifferentialEquations.ctv | 22 ctv-0.7-9/ctv/inst/ctv/Distributions.ctv | 81 + ctv-0.7-9/ctv/inst/ctv/Econometrics.ctv | 40 ctv-0.7-9/ctv/inst/ctv/Environmetrics.ctv | 30 ctv-0.7-9/ctv/inst/ctv/ExperimentalDesign.ctv | 10 ctv-0.7-9/ctv/inst/ctv/Finance.ctv | 62 - ctv-0.7-9/ctv/inst/ctv/Genetics.ctv | 6 ctv-0.7-9/ctv/inst/ctv/HighPerformanceComputing.ctv | 97 + ctv-0.7-9/ctv/inst/ctv/MachineLearning.ctv | 40 ctv-0.7-9/ctv/inst/ctv/MedicalImaging.ctv | 17 ctv-0.7-9/ctv/inst/ctv/MetaAnalysis.ctv | 86 + ctv-0.7-9/ctv/inst/ctv/Multivariate.ctv | 16 ctv-0.7-9/ctv/inst/ctv/NaturalLanguageProcessing.ctv | 215 +-- ctv-0.7-9/ctv/inst/ctv/NumericalMathematics.ctv |only ctv-0.7-9/ctv/inst/ctv/OfficialStatistics.ctv | 26 ctv-0.7-9/ctv/inst/ctv/Pharmacokinetics.ctv | 8 ctv-0.7-9/ctv/inst/ctv/Phylogenetics.ctv | 41 ctv-0.7-9/ctv/inst/ctv/Psychometrics.ctv | 108 + ctv-0.7-9/ctv/inst/ctv/ReproducibleResearch.ctv | 26 ctv-0.7-9/ctv/inst/ctv/Robust.ctv | 123 +- ctv-0.7-9/ctv/inst/ctv/SocialSciences.ctv | 7 ctv-0.7-9/ctv/inst/ctv/Spatial.ctv | 180 ++- ctv-0.7-9/ctv/inst/ctv/SpatioTemporal.ctv | 1028 +++++++++---------- ctv-0.7-9/ctv/inst/ctv/Survival.ctv | 29 ctv-0.7-9/ctv/inst/ctv/TimeSeries.ctv | 94 + ctv-0.7-9/ctv/inst/ctv/WebTechnologies.ctv |only ctv-0.7-9/ctv/inst/ctv/gR.ctv | 23 ctv-0.7-9/ctv/inst/doc/ctv-howto.Rnw | 8 ctv-0.7-9/ctv/inst/doc/ctv-howto.pdf |binary ctv-0.7-9/ctv/man/ctv-server.Rd | 5 ctv-0.7-9/ctv/vignettes/ctv-howto.Rnw | 8 41 files changed, 1592 insertions(+), 1151 deletions(-)