Package rpf updated to version 0.28 with previous version 0.27 dated 2014-03-18

Title: Response Probability Functions
Description: The purpose of this package is to factor out logic and math common to Item Factor Analysis fitting, diagnostics, and analysis. It is envisioned as core support code suitable for more specialized IRT packages to build upon. Complete access to optimized C functions are made available with R_RegisterCCallable.
Author: Joshua Pritikin [cre, aut], Jonathan Weeks [ctb], Li Cai [ctb], Carrie Houts [ctb], Phil Chalmers [ctb]
Maintainer: Joshua Pritikin

Diff between rpf versions 0.27 dated 2014-03-18 and 0.28 dated 2014-04-03

 DESCRIPTION                 |    8 ++++----
 MD5                         |   18 +++++++++---------
 R/classes.R                 |   16 ++++++++++++++++
 R/sample.R                  |    2 +-
 inst/doc/flexmirt-plots.pdf |binary
 inst/tests/test-dTheta.R    |   16 ++++++++--------
 inst/tests/test-extreme.R   |    2 +-
 inst/tests/test-plink.R     |    2 +-
 inst/tests/test-sample.R    |    2 +-
 man/rpf.base-class.Rd       |    2 ++
 10 files changed, 43 insertions(+), 25 deletions(-)

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New package bigsplines with initial version 1.0-0
Package: bigsplines
Type: Package
Title: Big Splines (smoothing splines for large samples)
Version: 1.0-0
Date: 2014-04-03
Author: Nathaniel E. Helwig
Maintainer: Nathaniel E. Helwig
Description: Fits smoothing spline regression models using scalable algorithms designed for large samples. Five marginal spline types are supported: cubic, different cubic, cubic periodic, cubic thin-plate, and nominal. Parametric predictors are also supported.
License: GPL (>= 2)
Packaged: 2014-04-03 05:01:17 UTC; Nate
NeedsCompilation: yes
Repository: CRAN
Date/Publication: 2014-04-04 01:27:18

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New package aRpsDCA with initial version 1.0.0
Package: aRpsDCA
Version: 1.0.0
Date: 2014-04-03
Title: Arps Decline Curve Analysis in R
Authors@R: c(person("Derrick", "Turk", role = c("aut", "cre", "cph"), email = "dwt@terminusdatascience.com"))
Description: Functions for Arps decline-curve analysis on oil and gas data. Includes exponential, hyperbolic, harmonic, and hyperbolic-to-exponential models as well as the preceding with initial curtailment. Functions included for computing rate, cumulative production, instantaneous decline, EUR, time to economic limit, and performing least-squares best fits.
License: LGPL-2.1
URL: https://github.com/derrickturk/aRpsDCA
BugReports: https://github.com/derrickturk/aRpsDCA/issues
Packaged: 2014-04-03 21:44:35 UTC; derrick
Author: Derrick Turk [aut, cre, cph]
Maintainer: Derrick Turk
NeedsCompilation: no
Repository: CRAN
Date/Publication: 2014-04-04 01:20:41

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New package rivervis with initial version 0.38.2
Package: rivervis
Type: Package
Title: River Visualisation Tool
Version: 0.38.2
Date: 2014-04-03
Author: Feng Mao , Yichuan Shi , and Keith Richards
Maintainer: Feng Mao
Description: Visualisation for quantitative and qualitative riverine data
License: GPL (>= 2)
Encoding: UTF-8
Imports: graphics
Repository: CRAN
Packaged: 2014-04-03 16:53:35 UTC; Fujitsu
NeedsCompilation: no
Date/Publication: 2014-04-03 20:20:38

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New package rDVR with initial version 0.1.1
Package: rDVR
Title: The rDVR package allows you to start stop and save a video server from within R.
Version: 0.1.1
Authors@R: "John Harrison [aut, cre]"
Description: The rDVR package allows you to start stop and save a video server from within R. It does this by way of a REST interface to a JAVA service. The jar binary relies on the screen recorder included in the Monte Media Library (CC BY 3.0 licence) developed by Werner Randelshofer (http://http://www.randelshofer.ch/monte/). The REST interface was modified from https://github.com/tuenti/VideoRecorderService which has an Apache licence.
URL: http://johndharrison.github.io/rDVR/
BugReports: https://github.com/johndharrison/rDVR/issues
Imports: methods,RCurl
Depends: R (>= 3.0.0)
Suggests: knitr,RSelenium
VignetteBuilder: knitr
License: AGPL-3
LazyData: yes
Packaged: 2014-04-03 16:53:11 UTC; john
Author: "John Harrison" [aut, cre]
Maintainer: "John Harrison"
NeedsCompilation: no
Repository: CRAN
Date/Publication: 2014-04-03 20:20:36

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New package findpython with initial version 1.0.1
Package: findpython
Type: Package
Title: Python tools to find an acceptable python binary
Version: 1.0.1
Author: Trevor L Davis and Paul Gilbert.
Maintainer: Trevor L Davis
URL: https://github.com/trevorld/findpython
BugReports: https://github.com/trevorld/findpython/issues
Description: Package designed to find an acceptable python binary.
Suggests: testthat
License: MIT + file LICENSE
Collate: 'find_python_cmd.r'
Packaged: 2014-04-03 17:33:07 UTC; trevorld
NeedsCompilation: no
Repository: CRAN
Date/Publication: 2014-04-03 20:20:34

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Package usl updated to version 1.2.2 with previous version 1.2.1 dated 2013-08-12

Title: Analyze system scalability with the Universal Scalability Law
Description: The Universal Scalability Law is a model to predict hardware and software scalability. It uses system capacity as a function of load to forecast the scalability for the system.
Author: Neil J. Gunther [aut], Stefan Moeding [aut, cre]
Maintainer: Stefan Moeding

Diff between usl versions 1.2.1 dated 2013-08-12 and 1.2.2 dated 2014-04-03

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 usl-1.2.2/usl/MD5                                |  101 ++++++++---------
 usl-1.2.2/usl/NAMESPACE                          |    2 
 usl-1.2.2/usl/NEWS                               |    6 +
 usl-1.2.2/usl/R/AllClasses.R                     |   34 ++---
 usl-1.2.2/usl/R/confint.R                        |    6 -
 usl-1.2.2/usl/R/efficiency.R                     |    7 -
 usl-1.2.2/usl/R/extract.R                        |    6 -
 usl-1.2.2/usl/R/finish.R                         |    2 
 usl-1.2.2/usl/R/initialize.R                     |    6 -
 usl-1.2.2/usl/R/plot.R                           |    6 -
 usl-1.2.2/usl/R/predict.R                        |   10 -
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 usl-1.2.2/usl/R/usl-package.R                    |    1 
 usl-1.2.2/usl/R/usl.R                            |   26 ++--
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 usl-1.2.2/usl/man/usl.Rd                         |  135 +++++++++++------------
 usl-1.2.2/usl/man/usl.solve.lm.Rd                |   20 +--
 usl-1.2.2/usl/man/usl.solve.nls.Rd               |   16 +-
 usl-1.2.2/usl/man/usl.solve.nlxb.Rd              |   16 +-
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 usl-1.2.2/usl/tests/t02.R                        |   10 -
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 usl-1.2.2/usl/tests/t05.R                        |    8 -
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 64 files changed, 358 insertions(+), 373 deletions(-)

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Package SSDforR updated to version 1.4.3 with previous version 1.4.2 dated 2014-02-13

Title: SSD for R to analyze single system data
Description: Package to visually and statistically analyze single system data
Author: Charles Auerbach,PHD Wendy Zeitlin Schudrich,PHD Wurzweiler School of Social Work
Maintainer: Charles Auerbach

Diff between SSDforR versions 1.4.2 dated 2014-02-13 and 1.4.3 dated 2014-04-03

 DESCRIPTION     |    6 +++---
 MD5             |   18 +++++++++---------
 R/Gindex.R      |   16 ++++++++++++----
 R/IQRline.R     |    2 ++
 R/SD2legend.R   |    2 +-
 R/Trimline.R    |    2 ++
 R/regabove.R    |    2 +-
 R/regbelow.R    |    2 +-
 R/robregabove.R |    2 +-
 R/robregbelow.R |    2 +-
 10 files changed, 33 insertions(+), 21 deletions(-)

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Package move updated to version 1.1.441-2 with previous version 1.1.441 dated 2013-10-21

Title: Visualizing and analyzing animal track data
Description: move is a package that contains functions to access movement data stored in movebank.org as well as tools to visualize and statistically analyse animal movement data. Move addresses movement ecological questions.
Author: Bart Kranstauber , Marco Smolla
Maintainer: Bart Kranstauber

Diff between move versions 1.1.441 dated 2013-10-21 and 1.1.441-2 dated 2014-04-03

 DESCRIPTION                      |    9 +++++----
 MD5                              |   16 ++++++++--------
 NAMESPACE                        |    6 ++++++
 R/AAClass.R                      |    4 ++--
 R/WebImport.R                    |    2 +-
 R/burst.R                        |    2 +-
 R/move.R                         |    6 +++---
 R/moveStack.R                    |    7 +++----
 inst/unitTests/runit.moveStack.R |    2 +-
 9 files changed, 30 insertions(+), 24 deletions(-)

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Package doRedis updated to version 1.1.1 with previous version 1.1.0 dated 2014-02-25

Title: Foreach parallel adapter for the rredis package
Description: A Redis parallel backend for the %dopar% function
Author: B. W. Lewis
Maintainer: B. W. Lewis

Diff between doRedis versions 1.1.0 dated 2014-02-25 and 1.1.1 dated 2014-04-03

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 doRedis-1.1.1/doRedis/R/redisWorker.R       |   90 +-
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New package ConnMatTools with initial version 0.1.4
Package: ConnMatTools
Type: Package
Title: Tools for working with connectivity matrices
Version: 0.1.4
Date: 2013-07-09
Author: Marco Andrello
Maintainer: David M. Kaplan
Description: ConnMatTools collects several different methods for analyzing and working with connectivity matrices in R. Though primarily oriented towards marine larval dispersal, many of the methods are general and useful for terrestrial systems as well.
URL: https://github.com/dmkaplan2000/ConnMatTools.git
Suggests: igraph
Collate: 'ConnMatTools.R' 'eigs.R' 'Jacobi_EPT_reserve_selection.R' 'datasets.R' 'dpr_model.R' 'retentionStats.R' 'jacobi_etal_2012.R'
License: GPL (>= 2)
Packaged: 2014-04-03 12:29:41 UTC; dmk
NeedsCompilation: no
Repository: CRAN
Date/Publication: 2014-04-03 18:30:23

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Package PReMiuM updated to version 3.0.23 with previous version 3.0.21 dated 2013-10-01

Title: Dirichlet Process Bayesian Clustering, Profile Regression
Description: Dirichlet process Bayesian clustering, also known as profile regression.
Author: David I. Hastie , Silvia Liverani , Sylvia Richardson , Lamiae Azizi
Maintainer: Silvia Liverani

Diff between PReMiuM versions 3.0.21 dated 2013-10-01 and 3.0.23 dated 2014-04-03

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 PReMiuM-3.0.23/PReMiuM/NAMESPACE                           |    2 
 PReMiuM-3.0.23/PReMiuM/R/generateData.R                    |   71 
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 PReMiuM-3.0.23/PReMiuM/src/include/PReMiuMProposals.h      |   19 
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 36 files changed, 596 insertions(+), 1548 deletions(-)

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New package nlreg with initial version 1.2-2
Package: nlreg
Version: 1.2-2
Date: 2014-03-31
Title: Higher Order Inference for Nonlinear Heteroscedastic Models
Author: S original by Alessandra R. Brazzale and Ruggero Bellio . R port by Alessandra R. Brazzale , following earlier work by Douglas Bates.
Maintainer: Alessandra R. Brazzale
URL: http://www.r-project.org, http://statwww.epfl.ch/AA/
Description: Likelihood inference based on higher order approximations for nonlinear models with possibly non constant variance
Depends: R (>= 3.0.0), statmod, survival
Suggests: boot, cond, csampling, marg
License: GPL (>= 2) | file LICENCE
LazyLoad: yes
LazyData: yes
Packaged: 2014-04-03 08:32:56 UTC; brazzale
NeedsCompilation: no
Repository: CRAN
Date/Publication: 2014-04-03 14:00:52

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New package marg with initial version 1.2-2
Package: marg
Version: 1.2-2
Date: 2014-03-31
Title: Approximate marginal inference for regression-scale models
Author: S original by Alessandra R. Brazzale . R port by Alessandra R. Brazzale , following earlier work by Douglas Bates.
Maintainer: Alessandra R. Brazzale
Depends: R (>= 3.0.0), statmod, survival
Suggests: boot, cond, csampling, nlreg
Description: Likelihood inference based on higher order approximations for linear nonnormal regression models
License: GPL (>= 2) | file LICENCE
URL: http://www.r-project.org, http://statwww.epfl.ch/AA/
LazyLoad: yes
LazyData: yes
Packaged: 2014-04-03 08:30:00 UTC; brazzale
NeedsCompilation: no
Repository: CRAN
Date/Publication: 2014-04-03 14:00:49

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New package JBTools with initial version 0.7.2.6
Package: JBTools
Title: JBs tools and helper functions.
Version: 0.7.2.6
Date: 2014-01-01
Author: Jannis v. Buttlar
Maintainer: Jannis v. Buttlar
Description: Collection of several tools and helper functions used across the other packages of J. Buttlar (ncdf.tools and spectral.methods).
Imports: foreach, parallel, gplots, colorspace, plotrix
Suggests: doMC
License: GPL-2
LazyLoad: yes
Depends: R (>= 2.14.0)
Packaged: 2014-04-03 09:53:01 UTC; jbuttlar
NeedsCompilation: no
Repository: CRAN
Date/Publication: 2014-04-03 14:00:41

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New package csampling with initial version 1.2-2
Package: csampling
Version: 1.2-2
Date: 2014-03-31
Title: Functions for Conditional Simulation in Regression-Scale Models
Author: S original by Alessandra R. Brazzale . R port by Alessandra R. Brazzale .
Maintainer: Alessandra R. Brazzale
Depends: R (>= 3.0.0), marg, statmod, survival
Description: Monte Carlo conditional inference for the parameters of a linear nonnormal regression model
License: GPL (>= 2) | file LICENCE
URL: http://www.r-project.org, http://statwww.epfl.ch/AA/
LazyLoad: yes
LazyData: yes
Packaged: 2014-04-03 08:28:05 UTC; brazzale
NeedsCompilation: no
Repository: CRAN
Date/Publication: 2014-04-03 14:00:47

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New package cond with initial version 1.2-2
Package: cond
Version: 1.2-2
Date: 2014-03-31
Title: Approximate conditional inference for logistic and loglinear models
Author: S original by Alessandra R. Brazzale . R port by Alessandra R. Brazzale , following earlier work by Douglas Bates.
Maintainer: Alessandra R. Brazzale
Depends: R (>= 3.0.0), statmod, survival
Suggests: boot, csampling, marg, nlreg
Description: Higher order likelihood-based inference for logistic and loglinear models
License: GPL (>= 2) | file LICENCE
URL: http://www.r-project.org, http://statwww.epfl.ch/AA/
LazyLoad: yes
LazyData: yes
Packaged: 2014-04-03 08:26:33 UTC; brazzale
NeedsCompilation: no
Repository: CRAN
Date/Publication: 2014-04-03 14:00:45

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New package Methplot with initial version 1.0
Package: Methplot
Type: Package
Title: Visualize the methylation patterns
Version: 1.0
Date: 2014-03-10
Author: Xin Yang
Maintainer: Xin Yang
Imports: ggplot2, grid, reshape
Description: It plots the output from Methpup (https://github.com/XinYang6699/Methpup)
License: GPL (>= 2)
LazyData: FALSE
Packaged: 2014-04-02 15:21:30 UTC; xin
NeedsCompilation: no
Repository: CRAN
Date/Publication: 2014-04-03 12:04:00

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Package linkcomm updated to version 1.0-8 with previous version 1.0-7 dated 2013-05-29

Title: Tools for Generating, Visualizing, and Analysing Link Communities in Networks
Description: Link communities reveal the nested and overlapping structure in networks, and uncover the key nodes that form connections to multiple communities. linkcomm provides a set of tools for generating, visualizing, and analysing link communities in networks of arbitrary size and type. The linkcomm package also includes tools for generating, visualizing, and analysing Overlapping Cluster Generator (OCG) communities.
Author: Alex T. Kalinka , with contributions from Alain Guenoche
Maintainer: Alex T. Kalinka

Diff between linkcomm versions 1.0-7 dated 2013-05-29 and 1.0-8 dated 2014-04-03

 DESCRIPTION                   |   20 ++-----
 MD5                           |   36 +++++++------
 NAMESPACE                     |    4 -
 NEWS                          |   17 ++++++
 R/linkcomm_misc.R             |  115 +++++++++++++++++++++++++++++++++++++++++-
 R/linkcomm_plotting.R         |    4 -
 build                         |only
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 src/linkcomm_edgesims.cpp     |   20 +++++--
 src/linkcomm_edgesims_all.cpp |    4 +
 src/linkcomm_functions.cpp    |    2 
 src/linkcomm_hclust.cpp       |    2 
 vignettes/linkcomm.Rnw        |   28 +++++++++-
 21 files changed, 279 insertions(+), 75 deletions(-)

More information about linkcomm at CRAN
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Package secr updated to version 2.8.1 with previous version 2.8.0 dated 2014-03-31

Title: Spatially explicit capture-recapture
Description: Functions to estimate the density and size of a spatially distributed animal population sampled with an array of passive detectors, such as traps, or by searching polygons or transects. Models incorporating distance-dependent detection are fitted by maximizing the likelihood. Tools are included for data manipulation and model selection.
Author: Murray Efford
Maintainer: Murray Efford

Diff between secr versions 2.8.0 dated 2014-03-31 and 2.8.1 dated 2014-04-03

 DESCRIPTION              |    8 ++++----
 MD5                      |   20 ++++++++++----------
 NEWS                     |   11 +++++++++++
 R/fxi.R                  |   24 +++++++++++++++---------
 R/reduce.R               |    4 ++--
 R/usagePlot.R            |    7 +++++--
 inst/doc/index.html      |   30 +++++++++++++++++++++++++++---
 inst/doc/secr-manual.pdf |binary
 man/secr-package.Rd      |    4 ++--
 man/usagePlot.Rd         |   11 ++++++-----
 src/secr.c               |   14 ++++++++------
 11 files changed, 90 insertions(+), 43 deletions(-)

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Package TrackReconstruction updated to version 1.1 with previous version 1.0 dated 2014-03-14

Title: Reconstruct animal tracks from magnetometer, accelerometer, depth and optional speed data.
Description: Reconstructs animal tracks from magnetometer, accelerometer, depth and optional speed data. Designed primarily using data from Wildlife Computers Daily Diary tags deployed on northern fur seals.
Author: Brian Battaile
Maintainer: Brian Battaile

Diff between TrackReconstruction versions 1.0 dated 2014-03-14 and 1.1 dated 2014-04-03

 TrackReconstruction-1.0/TrackReconstruction/R/CalcBering.R                                 |only
 TrackReconstruction-1.0/TrackReconstruction/man/CalcBering.Rd                              |only
 TrackReconstruction-1.0/TrackReconstruction/vignettes/TrackReconstructionVignette3-019.jpg |only
 TrackReconstruction-1.0/TrackReconstruction/vignettes/TrackReconstructionVignette3-022.jpg |only
 TrackReconstruction-1.0/TrackReconstruction/vignettes/TrackReconstructionVignette3-026.jpg |only
 TrackReconstruction-1.1/TrackReconstruction/DESCRIPTION                                    |   14 -
 TrackReconstruction-1.1/TrackReconstruction/MD5                                            |   94 +++++----
 TrackReconstruction-1.1/TrackReconstruction/NAMESPACE                                      |    2 
 TrackReconstruction-1.1/TrackReconstruction/R/CalcBearing.R                                |only
 TrackReconstruction-1.1/TrackReconstruction/R/CalcLatitude.R                               |    4 
 TrackReconstruction-1.1/TrackReconstruction/R/CalcLongitude.R                              |    4 
 TrackReconstruction-1.1/TrackReconstruction/R/DeadReckoning.R                              |    1 
 TrackReconstruction-1.1/TrackReconstruction/R/GPStable.R                                   |    4 
 TrackReconstruction-1.1/TrackReconstruction/R/GeoRef.R                                     |    2 
 TrackReconstruction-1.1/TrackReconstruction/R/GeoReference.R                               |   96 +++++-----
 TrackReconstruction-1.1/TrackReconstruction/R/GraphLimits.R                                |    2 
 TrackReconstruction-1.1/TrackReconstruction/R/Mapper.R                                     |   19 -
 TrackReconstruction-1.1/TrackReconstruction/data/datalist                                  |    1 
 TrackReconstruction-1.1/TrackReconstruction/data/square.rda                                |only
 TrackReconstruction-1.1/TrackReconstruction/inst/doc/TrackReconstruction.R                 |    8 
 TrackReconstruction-1.1/TrackReconstruction/inst/doc/TrackReconstruction.Snw               |   17 +
 TrackReconstruction-1.1/TrackReconstruction/inst/doc/TrackReconstruction.pdf               |binary
 TrackReconstruction-1.1/TrackReconstruction/man/CalcBearing.Rd                             |only
 TrackReconstruction-1.1/TrackReconstruction/man/CalcDistance.Rd                            |   14 -
 TrackReconstruction-1.1/TrackReconstruction/man/CalcLatitude.Rd                            |   15 -
 TrackReconstruction-1.1/TrackReconstruction/man/CalcLongitude.Rd                           |   20 +-
 TrackReconstruction-1.1/TrackReconstruction/man/DeadReckoning.Rd                           |   43 ++--
 TrackReconstruction-1.1/TrackReconstruction/man/GPStable.Rd                                |    9 
 TrackReconstruction-1.1/TrackReconstruction/man/GapFinder.Rd                               |    8 
 TrackReconstruction-1.1/TrackReconstruction/man/GeoRef.Rd                                  |   15 -
 TrackReconstruction-1.1/TrackReconstruction/man/GeoReference.Rd                            |   15 -
 TrackReconstruction-1.1/TrackReconstruction/man/GraphLimits.Rd                             |    8 
 TrackReconstruction-1.1/TrackReconstruction/man/Mapper.Rd                                  |   30 +--
 TrackReconstruction-1.1/TrackReconstruction/man/Splitter.Rd                                |   13 -
 TrackReconstruction-1.1/TrackReconstruction/man/Standardize.Rd                             |   11 -
 TrackReconstruction-1.1/TrackReconstruction/man/TrackReconstruction-package.Rd             |   18 -
 TrackReconstruction-1.1/TrackReconstruction/man/bathymetry.Rd                              |   23 +-
 TrackReconstruction-1.1/TrackReconstruction/man/georef1min01.Rd                            |   13 -
 TrackReconstruction-1.1/TrackReconstruction/man/georef1min02.Rd                            |   14 -
 TrackReconstruction-1.1/TrackReconstruction/man/georef1min03.Rd                            |   13 -
 TrackReconstruction-1.1/TrackReconstruction/man/georef1min26.Rd                            |   14 -
 TrackReconstruction-1.1/TrackReconstruction/man/georef1min95.Rd                            |   14 -
 TrackReconstruction-1.1/TrackReconstruction/man/gpsdata01.Rd                               |    4 
 TrackReconstruction-1.1/TrackReconstruction/man/gpsdata02.Rd                               |    5 
 TrackReconstruction-1.1/TrackReconstruction/man/gpsdata03.Rd                               |    4 
 TrackReconstruction-1.1/TrackReconstruction/man/gpsdata26.Rd                               |    4 
 TrackReconstruction-1.1/TrackReconstruction/man/gpsdata95.Rd                               |    4 
 TrackReconstruction-1.1/TrackReconstruction/man/rawdata.Rd                                 |    8 
 TrackReconstruction-1.1/TrackReconstruction/man/rawdatagap.Rd                              |    5 
 TrackReconstruction-1.1/TrackReconstruction/man/square.Rd                                  |only
 TrackReconstruction-1.1/TrackReconstruction/vignettes/TrackReconstruction.Snw              |   17 +
 TrackReconstruction-1.1/TrackReconstruction/vignettes/TrackReconstructionPlotFig-006.jpg   |only
 TrackReconstruction-1.1/TrackReconstruction/vignettes/TrackReconstructionPlotFig-009.jpg   |only
 TrackReconstruction-1.1/TrackReconstruction/vignettes/TrackReconstructionPlotFig-012.jpg   |only
 54 files changed, 354 insertions(+), 275 deletions(-)

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New package survivalMPL with initial version 0.1.0
Package: survivalMPL
Title: Penalised Maximum Likelihood for Survival Analysis Models
Version: 0.1.0
Date: 2014-04-03
Author: Dominique-Laurent Couturier, Jun Ma, Stephane Heritier.
Maintainer: Dominique-Laurent Couturier
Description: Estimate the regression coefficients and the baseline hazard of proportional hazard Cox models using maximum penalised likelihood. A 'non-parametric' smooth estimate of the baseline hazard function is provided.
Depends: survival
NeedsCompilation: yes
License: LGPL (>= 2)
Packaged: 2014-04-03 03:45:10 UTC; research
Repository: CRAN
Date/Publication: 2014-04-03 06:01:58

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New package RankResponse with initial version 3.0.3
Package: RankResponse
Type: Package
Title: Ranking Responses in a Single Response Question or a Multiple Response Question
Version: 3.0.3
Date: 2014-03-18
Author: Hsiuying Wang, Yu-Jun Lin
Maintainer: Hsiuying Wang
Description: Methods for ranking responses of a single response question or a multiple response question
License: GPL-2
Packaged: 2014-04-02 16:45:17 UTC; Much
NeedsCompilation: no
Repository: CRAN
Date/Publication: 2014-04-03 05:57:23

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Package pcg updated to version 1.1 with previous version 1.0 dated 2014-02-18

Title: Preconditioned Conjugate Gradient Algorithm for solving Ax=b
Description: The package solves linear system of equations Ax=b by using Preconditioned Conjugate Gradient Algorithm where A is real symmetric positive definite matrix. A suitable preconditioner matrix may be provided by user. This can also be used to minimize quadratic function (x'Ax)/2-bx for unknown x.
Author: B N Mandal and Jun Ma
Maintainer: B N Mandal

Diff between pcg versions 1.0 dated 2014-02-18 and 1.1 dated 2014-04-03

 DESCRIPTION |   12 ++++++------
 MD5         |    4 ++--
 R/pcg.R     |    5 +++--
 3 files changed, 11 insertions(+), 10 deletions(-)

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Package climdex.pcic updated to version 1.1-1 with previous version 1.0-3 dated 2013-12-24

Title: PCIC implementation of Climdex routines
Description: The climdex.pcic package provides PCIC's implementation of Climdex routines for computation of climate indices.
Author: David Bronaugh for the Pacific Climate Impacts Consortium
Maintainer: David Bronaugh

Diff between climdex.pcic versions 1.0-3 dated 2013-12-24 and 1.1-1 dated 2014-04-03

 CHANGELOG                                   |   10 +
 DESCRIPTION                                 |   13 +-
 MD5                                         |  112 +++++++++++-----------
 NAMESPACE                                   |    4 
 R/climdex.pcic-package.R                    |    3 
 R/climdex.r                                 |   96 +++++++------------
 man/climdex.cdd.Rd                          |   29 ++---
 man/climdex.csdi.Rd                         |   61 ++++++------
 man/climdex.cwd.Rd                          |   30 ++---
 man/climdex.dtr.Rd                          |   28 ++---
 man/climdex.fd.Rd                           |   23 ++--
 man/climdex.get.available.indices.Rd        |   21 ++--
 man/climdex.gsl.Rd                          |   84 ++++++++--------
 man/climdex.id.Rd                           |   23 ++--
 man/climdex.pcic.Rd                         |   90 ++++++++---------
 man/climdex.prcptot.Rd                      |   24 ++--
 man/climdex.quantile.Rd                     |   14 +-
 man/climdex.r10mm.Rd                        |   20 ++-
 man/climdex.r20mm.Rd                        |   20 ++-
 man/climdex.r95ptot.Rd                      |   25 ++--
 man/climdex.r99ptot.Rd                      |   25 ++--
 man/climdex.rnnmm.Rd                        |   22 ++--
 man/climdex.rx1day.Rd                       |   36 +++----
 man/climdex.rx5day.Rd                       |   38 +++----
 man/climdex.sdii.Rd                         |   28 ++---
 man/climdex.su.Rd                           |   24 ++--
 man/climdex.tn10p.Rd                        |   63 +++++++-----
 man/climdex.tn90p.Rd                        |   63 +++++++-----
 man/climdex.tnn.Rd                          |   21 ++--
 man/climdex.tnx.Rd                          |   21 ++--
 man/climdex.tr.Rd                           |   23 ++--
 man/climdex.tx10p.Rd                        |   63 +++++++-----
 man/climdex.tx90p.Rd                        |   63 +++++++-----
 man/climdex.txn.Rd                          |   21 ++--
 man/climdex.txx.Rd                          |   21 ++--
 man/climdex.wsdi.Rd                         |   61 ++++++------
 man/climdexInput.Rd                         |  131 +++++++++++++-------------
 man/climdexInput.csv.Rd                     |  119 +++++++++++------------
 man/climdexInput.raw.Rd                     |  129 ++++---------------------
 man/ec.1018935.Rd                           |   25 ++--
 man/get.last.monthday.of.year.Rd            |   13 +-
 man/get.outofbase.quantiles.Rd              |   45 ++++----
 man/get.series.lengths.at.ends.Rd           |   21 +---
 man/growing.season.length.Rd                |   44 ++++----
 man/nday.consec.prec.max.Rd                 |   26 ++---
 man/number.days.op.threshold.Rd             |   25 ++--
 man/percent.days.op.threshold.Rd            |   30 +++--
 man/select.blocks.gt.length.Rd              |   21 +---
 man/simple.precipitation.intensity.index.Rd |   21 +---
 man/spell.length.max.Rd                     |   33 +++---
 man/threshold.exceedance.duration.index.Rd  |   41 +++-----
 man/total.precip.op.threshold.Rd            |   17 +--
 src/zhang_running_quantile.cc               |  141 +++++++---------------------
 tests/bootstrap.R                           |    1 
 tests/exemplar_data.rda                     |binary
 tests/test_indices.R                        |    8 -
 tests/test_primitives.R                     |   56 ++++++++++-
 57 files changed, 1119 insertions(+), 1151 deletions(-)

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