Sun, 08 Jun 2014

New package mvnfast with initial version 0.1.0
Package: mvnfast
Type: Package
Title: Fast multivariate normal methods
Version: 0.1.0
Date: 2014-06-08
Author: Matteo Fasiolo, employing the C++ parallel RNG provided by Thijs van den Berg
Maintainer: Matteo Fasiolo
Description: The package provides computationally efficient tools related to the multivariate normal distribution. The main functionalities are: simulating multivariate normal random vectors, evaluating multivariate normal densities and Mahalanobis distances. These tools are very efficient thanks to the use of C++ code and of the OpenMP API.
License: GPL (>= 2.0)
URL: https://github.com/mfasiolo/mvnfast, www.sitmo.com
Imports: Rcpp (>= 0.10.4)
Suggests: knitr, testthat, mvtnorm, microbenchmark, MASS, plyr
LinkingTo: Rcpp, RcppArmadillo
VignetteBuilder: knitr
Packaged: 2014-06-08 20:35:35 UTC; teo
NeedsCompilation: yes
Repository: CRAN
Date/Publication: 2014-06-08 23:20:24

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New package EBEN with initial version 1.1
Package: EBEN
Type: Package
Title: Empirical Bayesian Elastic Net
Version: 1.1
Date: 2014-06-06
Author: Anhui Huang; Shizhong Xu; Xiaodong Cai
Maintainer: Anhui Huang
Description: Empirical Bayesian Elastic Net algorithms.
License: GPL
Packaged: 2014-06-08 21:42:34 UTC; Anhui
Depends: R (>= 2.10)
NeedsCompilation: yes
Repository: CRAN
Date/Publication: 2014-06-09 00:27:46

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Package Boruta updated to version 3.1.0 with previous version 3.0.0 dated 2013-12-03

Title: A wrapper algorithm for all-relevant feature selection
Description: Boruta is an all-relevant feature selection wrapper algorithm. It finds relevant features by comparing original attributes' importance with importance achievable at random, estimated using their permuted copies.
Author: Miron Bartosz Kursa [aut, cre], Witold Remigiusz Rudnicki [aut]
Maintainer: Miron Bartosz Kursa

Diff between Boruta versions 3.0.0 dated 2013-12-03 and 3.1.0 dated 2014-06-08

 DESCRIPTION                  |    7 +-
 MD5                          |   30 +++++-----
 NAMESPACE                    |   16 +++--
 R/Boruta.R                   |   57 +++++++++++--------
 R/TentativeRoughFix.R        |    2 
 R/plot.Boruta.R              |    4 -
 inst/NEWS                    |    4 +
 man/Boruta.Rd                |  127 +++++++++++++++----------------------------
 man/TentativeRoughFix.Rd     |   48 ++++++++--------
 man/attStats.Rd              |   26 +++-----
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 man/getSelectedAttributes.Rd |   15 ++---
 man/plot.Boruta.Rd           |   48 ++++++----------
 man/plotImpHistory.Rd        |   49 ++++++----------
 man/print.Boruta.Rd          |   14 ++--
 16 files changed, 218 insertions(+), 276 deletions(-)

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New package berryFunctions with initial version 1.3
Package: berryFunctions
Type: Package
Title: function collection related to hydrology, zooming and shapefiles
Version: 1.3
Date: 2014-06-08
Suggests: evd, lmom, maptools, spatstat
Author: Berry Boessenkool
Maintainer: Berry Boessenkool
Description: collection of functions to: zoom in X11 graphics and ESRI shapefile plots, use the unit hydrograph in a linear storage cascade, compare several extreme-value-distributions at return periods, draw horizontal histograms and scatterplots colored by 3rd dimension, convert lists to data.frames, fit multiple functions (power, reciprocal, exponential, logarithmic, polynomial, rational) by regression.
License: GPL-2
Packaged: 2014-06-08 19:58:51 UTC; berry
NeedsCompilation: no
Repository: CRAN
Date/Publication: 2014-06-09 00:27:33

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Package synlik updated to version 0.1.1 with previous version 0.1.0 dated 2014-03-20

Title: Synthetic Likelihood methods for intractable likelihoods.
Description: Framework to perform synthetic likelihood inference for models where the likelihood function is unavailable or intractable.
Author: Matteo Fasiolo and Simon Wood
Maintainer: Matteo Fasiolo

Diff between synlik versions 0.1.0 dated 2014-03-20 and 0.1.1 dated 2014-06-08

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 17 files changed, 40 insertions(+), 122 deletions(-)

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Package dendroextras updated to version 0.2 with previous version 0.1-4 dated 2014-03-03

Title: Extra functions to cut, label and colour dendrogram clusters
Description: This package provides extra functions to manipulate dendrograms that build on the base functions provided by the stats package. The main functionality it is designed to add is the ability to colour all the edges in an object of class dendrogram according to cluster membership i.e. each subtree is coloured, not just the terminal leaves. In addition it provides some utility functions to cut dendrogram and hclust objects and to set/get labels.
Author: Gregory Jefferis
Maintainer: Gregory Jefferis

Diff between dendroextras versions 0.1-4 dated 2014-03-03 and 0.2 dated 2014-06-08

 DESCRIPTION                       |    8 ++++----
 MD5                               |   26 +++++++++++++-------------
 NAMESPACE                         |    2 ++
 NEWS                              |    7 +++++++
 R/colour_clusters.R               |   12 +++++++++++-
 R/dendroextras-package.R          |   24 +++++++++++++++++++++++-
 inst/tests/test-colour-clusters.R |   17 +++++++++++++++++
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 man/labels-assign.Rd              |    8 ++++----
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 man/leaf_colours.Rd               |    9 ++++-----
 man/set_leaf_colours.Rd           |   10 +++++-----
 man/slice.Rd                      |   18 ++++++++----------
 14 files changed, 150 insertions(+), 71 deletions(-)

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Package R.rsp updated to version 0.19.0 with previous version 0.15.0 dated 2014-02-27

Title: Dynamic generation of scientific reports
Description: The RSP markup language makes any text-based document come alive. RSP provides a powerful markup for controlling the content and output of LaTeX, HTML, Markdown, AsciiDoc, Sweave and knitr documents (and more), e.g. 'Today's date is <%=Sys.Date()%>'. Contrary to many other literate programming languages, with RSP it is straightforward to loop over mixtures of code and text sections, e.g. in month-by-month summaries. RSP has also several preprocessing directives for incorporating static and dynamic contents of external files (local or online) among other things. Functions rstring() and rcat() make it easy to process RSP strings, rsource() sources an RSP file as it was an R script, while rfile() compiles it (even online) into its final output format, e.g. rfile('report.tex.rsp') generates 'report.pdf' and rfile('report.md.rsp') generates 'report.html'. RSP is ideal for self-contained scientific reports and R package vignettes. It's easy to use - if you know how to write an R script, you'll be up and running within minutes.
Author: Henrik Bengtsson [aut, cre, cph]
Maintainer: Henrik Bengtsson

Diff between R.rsp versions 0.15.0 dated 2014-02-27 and 0.19.0 dated 2014-06-08

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 R.rsp-0.19.0/R.rsp/.Rinstignore                                                            |    2 
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 R.rsp-0.19.0/R.rsp/MD5                                                                     |  200 +++++-----
 R.rsp-0.19.0/R.rsp/NAMESPACE                                                               |   15 
 R.rsp-0.19.0/R.rsp/NEWS                                                                    |  111 +++++
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 R.rsp-0.19.0/R.rsp/R/999.package.R                                                         |   20 -
 R.rsp-0.19.0/R.rsp/R/HttpDaemon.R                                                          |    2 
 R.rsp-0.19.0/R.rsp/R/RspDirective.R                                                        |   11 
 R.rsp-0.19.0/R.rsp/R/RspDocument.R                                                         |   38 +
 R.rsp-0.19.0/R.rsp/R/RspFileProduct.R                                                      |   61 ++-
 R.rsp-0.19.0/R.rsp/R/RspParser.R                                                           |   10 
 R.rsp-0.19.0/R.rsp/R/RspProduct.R                                                          |   18 
 R.rsp-0.19.0/R.rsp/R/RspRSourceCode.R                                                      |    2 
 R.rsp-0.19.0/R.rsp/R/RspRSourceCodeFactory.R                                               |   45 +-
 R.rsp-0.19.0/R.rsp/R/RspSourceCodeFactory.R                                                |    8 
 R.rsp-0.19.0/R.rsp/R/RspString.R                                                           |   16 
 R.rsp-0.19.0/R.rsp/R/buildNonSweaveVignette.R                                              |   32 +
 R.rsp-0.19.0/R.rsp/R/buildVignette.R                                                       |    4 
 R.rsp-0.19.0/R.rsp/R/compileAsciiDoc.R                                                     |   17 
 R.rsp-0.19.0/R.rsp/R/compileAsciiDocNoweb.R                                                |   17 
 R.rsp-0.19.0/R.rsp/R/compileKnitr.R                                                        |   17 
 R.rsp-0.19.0/R.rsp/R/compileLaTeX.R                                                        |  174 ++++++++
 R.rsp-0.19.0/R.rsp/R/compileMarkdown.R                                                     |   17 
 R.rsp-0.19.0/R.rsp/R/compileRnw.R                                                          |   30 +
 R.rsp-0.19.0/R.rsp/R/compileRsp.R                                                          |   16 
 R.rsp-0.19.0/R.rsp/R/compileSweave.R                                                       |   15 
 R.rsp-0.19.0/R.rsp/R/parseInternetMediaType.R                                              |    4 
 R.rsp-0.19.0/R.rsp/R/parseRsp.R                                                            |    2 
 R.rsp-0.19.0/R.rsp/R/rargs.R                                                               |    2 
 R.rsp-0.19.0/R.rsp/R/rcat.R                                                                |    1 
 R.rsp-0.19.0/R.rsp/R/rclean.R                                                              |    1 
 R.rsp-0.19.0/R.rsp/R/rcompile.R                                                            |  142 ++++++-
 R.rsp-0.19.0/R.rsp/R/rfile.R                                                               |   56 ++
 R.rsp-0.19.0/R.rsp/R/rscript.R                                                             |  141 ++++++-
 R.rsp-0.19.0/R.rsp/R/rsptex.R                                                              |    4 
 R.rsp-0.19.0/R.rsp/R/rstring.R                                                             |    1 
 R.rsp-0.19.0/R.rsp/R/typeOfRnw.R                                                           |   15 
 R.rsp-0.19.0/R.rsp/R/xweavetangle.R                                                        |  152 +++++--
 R.rsp-0.19.0/R.rsp/R/zzz.R                                                                 |   21 -
 R.rsp-0.19.0/R.rsp/build/vignette.rds                                                      |binary
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 R.rsp-0.19.0/R.rsp/inst/doc/RSP-intro.md.rsp                                               |    7 
 R.rsp-0.19.0/R.rsp/inst/doc/RSP-refcard.pdf                                                |binary
 R.rsp-0.19.0/R.rsp/inst/doc/RSP-refcard.tex.rsp                                            |    2 
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 R.rsp-0.19.0/R.rsp/inst/rsp_tests/multi,selfcontained.md.rsp                               |    4 
 R.rsp-0.19.0/R.rsp/inst/rsp_tests/variables.txt.rsp                                        |   16 
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 R.rsp-0.19.0/R.rsp/man/FileRspResponse.Rd                                                  |    2 
 R.rsp-0.19.0/R.rsp/man/HtmlRspLanguage.Rd                                                  |    2 
 R.rsp-0.19.0/R.rsp/man/HttpDaemon.Rd                                                       |    2 
 R.rsp-0.19.0/R.rsp/man/HttpDaemonRspResponse.Rd                                            |    2 
 R.rsp-0.19.0/R.rsp/man/HttpRequest.Rd                                                      |    2 
 R.rsp-0.19.0/R.rsp/man/Non-documented_objects.Rd                                           |    1 
 R.rsp-0.19.0/R.rsp/man/R.rsp-package.Rd                                                    |   24 -
 R.rsp-0.19.0/R.rsp/man/RRspPackage.Rd                                                      |    2 
 R.rsp-0.19.0/R.rsp/man/RspException.Rd                                                     |    2 
 R.rsp-0.19.0/R.rsp/man/RspLanguage.Rd                                                      |    2 
 R.rsp-0.19.0/R.rsp/man/RspPage.Rd                                                          |    2 
 R.rsp-0.19.0/R.rsp/man/RspResponse.Rd                                                      |    2 
 R.rsp-0.19.0/R.rsp/man/buildNonSweaveTexToPdf.Rd                                           |    2 
 R.rsp-0.19.0/R.rsp/man/compileRnw.Rd                                                       |    7 
 R.rsp-0.19.0/R.rsp/man/getMetadata.RspDocument.Rd                                          |    2 
 R.rsp-0.19.0/R.rsp/man/getMetadata.RspProduct.Rd                                           |    2 
 R.rsp-0.19.0/R.rsp/man/getMetadata.RspString.Rd                                            |    2 
 R.rsp-0.19.0/R.rsp/man/getType.RspProduct.Rd                                               |    2 
 R.rsp-0.19.0/R.rsp/man/makeSourceCode.RspSourceCodeFactory.Rd                              |    3 
 R.rsp-0.19.0/R.rsp/man/rcompile.Rd                                                         |   19 
 R.rsp-0.19.0/R.rsp/man/rfile.Rd                                                            |    2 
 R.rsp-0.19.0/R.rsp/man/rscript.Rd                                                          |   20 -
 R.rsp-0.19.0/R.rsp/man/rspTangle.Rd                                                        |    4 
 R.rsp-0.19.0/R.rsp/man/rspWeave.Rd                                                         |    9 
 R.rsp-0.19.0/R.rsp/tests/LoremIpsum.R                                                      |    1 
 R.rsp-0.19.0/R.rsp/tests/compileLaTeX.R                                                    |   14 
 R.rsp-0.19.0/R.rsp/tests/deparse.R                                                         |    2 
 R.rsp-0.19.0/R.rsp/tests/rcat.R                                                            |    8 
 R.rsp-0.19.0/R.rsp/tests/rcompile.R                                                        |    2 
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 110 files changed, 1366 insertions(+), 410 deletions(-)

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Package numOSL updated to version 1.4 with previous version 1.3 dated 2014-04-20

Title: Numeric routines for optically stimulated luminescence dating
Description: Package for optimizing regular numeric problems in optically stimulated luminescence dating, such as: equivalent dose calculation; decay curve decomposition and fast-component equivalent dose estimation; statistical age models analysis and radial plot drawing.
Author: Peng Jun
Maintainer: Peng Jun

Diff between numOSL versions 1.3 dated 2014-04-20 and 1.4 dated 2014-06-08

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 19 files changed, 896 insertions(+), 52 deletions(-)

More information about numOSL at CRAN
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Package matrixStats updated to version 0.10.0 with previous version 0.9.7 dated 2014-06-07

Title: Methods that apply to rows and columns of a matrix
Description: This packages provides methods operating on rows and columns of matrices, e.g. col/rowMedians() and col/rowRanks(). There are also some vector-based methods, e.g. anyMissing(), weightedMedians(), and binMeans(). The objective is to have all methods being optimized for speed and memory usage.
Author: Henrik Bengtsson [aut, cre, cph], Hector Corrada Bravo [ctb], Robert Gentleman [ctb], Ola Hossjer [ctb], Harris Jaffee [ctb], Peter Langfelder [ctb]
Maintainer: Henrik Bengtsson

Diff between matrixStats versions 0.9.7 dated 2014-06-07 and 0.10.0 dated 2014-06-08

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 10 files changed, 70 insertions(+), 67 deletions(-)

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Package Rcpp updated to version 0.11.2 with previous version 0.11.1 dated 2014-03-14

Title: Seamless R and C++ Integration
Description: The Rcpp package provides R functions as well as a C++ library which facilitate the integration of R and C++. R data types (SEXP) are matched to C++ objects in a class hierarchy. All R types are supported (vectors, functions, environment, etc ...) and each type is mapped to a dedicated class. For example, numeric vectors are represented as instances of the Rcpp::NumericVector class, environments are represented as instances of Rcpp::Environment, functions are represented as Rcpp::Function, etc ... The "Rcpp-introduction" vignette provides a good entry point to Rcpp. Conversion from C++ to R and back is driven by the templates Rcpp::wrap and Rcpp::as which are highly flexible and extensible, as documented in the "Rcpp-extending" vignette. Rcpp also provides Rcpp modules, a framework that allows exposing C++ functions and classes to the R level. The "Rcpp-modules" vignette details the current set of features of Rcpp-modules. Rcpp includes a concept called Rcpp sugar that brings many R functions into C++. Sugar takes advantage of lazy evaluation and expression templates to achieve great performance while exposing a syntax that is much nicer to use than the equivalent low-level loop code. The "Rcpp-sugar" vignette gives an overview of the feature. Rcpp attributes provide a high-level syntax for declaring C++ functions as callable from R and automatically generating the code required to invoke them. Attributes are intended to facilitate both interactive use of C++ within R sessions as well as to support R package development. Attributes are built on top of Rcpp modules and their implementation is based on previous work in the inline package. Many examples are included, and around 900 unit tests in 446 unit test functions provide additional usage examples. An earlier version of Rcpp, containing what we now call the 'classic Rcpp API' was written during 2005 and 2006 by Dominick Samperi. This code has been factored out of Rcpp into the package RcppClassic, and it is still available for code relying on the older interface. New development should always use this Rcpp package instead. Additional documentation is available via the paper by Eddelbuettel and Francois (2011, JSS) paper and the book by Eddelbuettel (2013, Springer); see 'citation("Rcpp")' for details.
Author: Dirk Eddelbuettel, Romain Francois, JJ Allaire, Kevin Ushey, Douglas Bates, and John Chambers
Maintainer: Dirk Eddelbuettel

Diff between Rcpp versions 0.11.1 dated 2014-03-14 and 0.11.2 dated 2014-06-08

 ChangeLog                                                                |  136 
 DESCRIPTION                                                              |   40 
 MD5                                                                      |  796 +--
 R/Attributes.R                                                           |   37 
 R/Module.R                                                               |    4 
 README.md                                                                |    3 
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 inst/NEWS.Rd                                                             |   32 
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 inst/doc/Rcpp-package.Rnw                                                |    2 
 inst/doc/Rcpp-package.pdf                                                |binary
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 inst/doc/Rcpp-sugar.Rnw                                                  |    7 
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 inst/examples/Attributes/Export.cpp                                      |   14 
 inst/examples/ConvolveBenchmarks/convolve10_cpp.cpp                      |   16 
 inst/examples/ConvolveBenchmarks/convolve10_cpp.h                        |   12 
 inst/examples/ConvolveBenchmarks/convolve11_cpp.cpp                      |    2 
 inst/examples/ConvolveBenchmarks/convolve12_cpp.cpp                      |    4 
 inst/examples/ConvolveBenchmarks/convolve13_cpp.cpp                      |    4 
 inst/examples/ConvolveBenchmarks/convolve14_cpp.cpp                      |    4 
 inst/examples/ConvolveBenchmarks/convolve3_cpp.cpp                       |    2 
 inst/examples/ConvolveBenchmarks/convolve4_cpp.cpp                       |    6 
 inst/examples/ConvolveBenchmarks/convolve5_cpp.cpp                       |    2 
 inst/examples/ConvolveBenchmarks/convolve8_cpp.cpp                       |    8 
 inst/examples/ConvolveBenchmarks/convolve9_cpp.cpp                       |   28 
 inst/examples/ConvolveBenchmarks/loopmacro.h                             |    2 
 inst/examples/SugarPerformance/Timer.h                                   |    8 
 inst/include/Rcpp.h                                                      |    2 
 inst/include/Rcpp/Benchmark/Timer.h                                      |   44 
 inst/include/Rcpp/DataFrame.h                                            |   73 
 inst/include/Rcpp/Date.h                                                 |   72 
 inst/include/Rcpp/DateVector.h                                           |    6 
 inst/include/Rcpp/Datetime.h                                             |   36 
 inst/include/Rcpp/DatetimeVector.h                                       |    6 
 inst/include/Rcpp/Dimension.h                                            |   22 
 inst/include/Rcpp/DottedPair.h                                           |   20 
 inst/include/Rcpp/DottedPairImpl.h                                       |   40 
 inst/include/Rcpp/Environment.h                                          |  131 
 inst/include/Rcpp/Extractor.h                                            |   12 
 inst/include/Rcpp/Fast.h                                                 |   12 
 inst/include/Rcpp/Formula.h                                              |   26 
 inst/include/Rcpp/Function.h                                             |   34 
 inst/include/Rcpp/InputParameter.h                                       |   34 
 inst/include/Rcpp/InternalFunction.h                                     |   20 
 inst/include/Rcpp/Interrupt.h                                            |   26 
 inst/include/Rcpp/Language.h                                             |   70 
 inst/include/Rcpp/Module.h                                               |  172 
 inst/include/Rcpp/Na_Proxy.h                                             |   30 
 inst/include/Rcpp/Named.h                                                |   24 
 inst/include/Rcpp/Pairlist.h                                             |   16 
 inst/include/Rcpp/Promise.h                                              |   36 
 inst/include/Rcpp/RObject.h                                              |   29 
 inst/include/Rcpp/Reference.h                                            |   24 
 inst/include/Rcpp/Rmath.h                                                |   12 
 inst/include/Rcpp/S4.h                                                   |   24 
 inst/include/Rcpp/StretchyList.h                                         |   38 
 inst/include/Rcpp/String.h                                               |  204 
 inst/include/Rcpp/StringTransformer.h                                    |   10 
 inst/include/Rcpp/Symbol.h                                               |   26 
 inst/include/Rcpp/Vector.h                                               |    7 
 inst/include/Rcpp/WeakReference.h                                        |   12 
 inst/include/Rcpp/XPtr.h                                                 |   60 
 inst/include/Rcpp/algo.h                                                 |   16 
 inst/include/Rcpp/api/bones/Date.h                                       |   10 
 inst/include/Rcpp/api/bones/Datetime.h                                   |   10 
 inst/include/Rcpp/api/bones/bones.h                                      |    2 
 inst/include/Rcpp/api/bones/wrap_extra_steps.h                           |    2 
 inst/include/Rcpp/api/meat/DataFrame.h                                   |    4 
 inst/include/Rcpp/api/meat/Date.h                                        |   10 
 inst/include/Rcpp/api/meat/Datetime.h                                    |   16 
 inst/include/Rcpp/api/meat/Dimension.h                                   |    8 
 inst/include/Rcpp/api/meat/DottedPairImpl.h                              |   26 
 inst/include/Rcpp/api/meat/Environment.h                                 |   18 
 inst/include/Rcpp/api/meat/Rcpp_eval.h                                   |   24 
 inst/include/Rcpp/api/meat/S4.h                                          |   18 
 inst/include/Rcpp/api/meat/StretchyList.h                                |    8 
 inst/include/Rcpp/api/meat/Vector.h                                      |   10 
 inst/include/Rcpp/api/meat/as.h                                          |    8 
 inst/include/Rcpp/api/meat/export.h                                      |   22 
 inst/include/Rcpp/api/meat/is.h                                          |   24 
 inst/include/Rcpp/api/meat/meat.h                                        |    2 
 inst/include/Rcpp/api/meat/module/Module.h                               |    6 
 inst/include/Rcpp/api/meat/wrap.h                                        |   14 
 inst/include/Rcpp/as.h                                                   |   68 
 inst/include/Rcpp/barrier.h                                              |    2 
 inst/include/Rcpp/clone.h                                                |    8 
 inst/include/Rcpp/complex.h                                              |    4 
 inst/include/Rcpp/config.h                                               |    4 
 inst/include/Rcpp/exceptions.h                                           |   88 
 inst/include/Rcpp/generated/DataFrame_generated.h                        |   40 
 inst/include/Rcpp/generated/Function__operator.h                         |   46 
 inst/include/Rcpp/generated/InternalFunction__ctors.h                    |    2 
 inst/include/Rcpp/generated/Language__ctors.h                            |  338 -
 inst/include/Rcpp/generated/Vector__create.h                             | 1384 +++---
 inst/include/Rcpp/grow.h                                                 |   30 
 inst/include/Rcpp/hash/IndexHash.h                                       |   82 
 inst/include/Rcpp/hash/SelfHash.h                                        |   32 
 inst/include/Rcpp/internal/Exporter.h                                    |   34 
 inst/include/Rcpp/internal/GreedyVector.h                                |   48 
 inst/include/Rcpp/internal/ListInitialization.h                          |    8 
 inst/include/Rcpp/internal/NAComparator.h                                |   20 
 inst/include/Rcpp/internal/NAEquals.h                                    |    4 
 inst/include/Rcpp/internal/Proxy_Iterator.h                              |   22 
 inst/include/Rcpp/internal/SEXP_Iterator.h                               |   26 
 inst/include/Rcpp/internal/caster.h                                      |   26 
 inst/include/Rcpp/internal/converter.h                                   |   10 
 inst/include/Rcpp/internal/export.h                                      |   58 
 inst/include/Rcpp/internal/na.h                                          |    6 
 inst/include/Rcpp/internal/r_coerce.h                                    |  114 
 inst/include/Rcpp/internal/r_vector.h                                    |   32 
 inst/include/Rcpp/internal/wrap.h                                        |  288 -
 inst/include/Rcpp/internal/wrap_end.h                                    |    8 
 inst/include/Rcpp/iostream/Rstreambuf.h                                  |   28 
 inst/include/Rcpp/is.h                                                   |   24 
 inst/include/Rcpp/lang.h                                                 |   72 
 inst/include/Rcpp/macros/debug.h                                         |   26 
 inst/include/Rcpp/macros/dispatch.h                                      |    6 
 inst/include/Rcpp/macros/interface.h                                     |    2 
 inst/include/Rcpp/macros/macros.h                                        |    8 
 inst/include/Rcpp/macros/module.h                                        |   10 
 inst/include/Rcpp/macros/preprocessor_generated.h                        |    4 
 inst/include/Rcpp/macros/unroll.h                                        |    2 
 inst/include/Rcpp/macros/xp.h                                            |    2 
 inst/include/Rcpp/module/CppFunction.h                                   |   30 
 inst/include/Rcpp/module/Module.h                                        |   90 
 inst/include/Rcpp/module/Module_Add_Property.h                           |   42 
 inst/include/Rcpp/module/Module_Field.h                                  |   38 
 inst/include/Rcpp/module/Module_Property.h                               |  146 
 inst/include/Rcpp/module/Module_generated_Constructor.h                  |   60 
 inst/include/Rcpp/module/Module_generated_CppFunction.h                  |  920 ++--
 inst/include/Rcpp/module/Module_generated_CppMethod.h                    | 1976 ++++-----
 inst/include/Rcpp/module/Module_generated_Factory.h                      |   78 
 inst/include/Rcpp/module/Module_generated_Pointer_CppMethod.h            | 2116 +++++-----
 inst/include/Rcpp/module/Module_generated_Pointer_method.h               |  132 
 inst/include/Rcpp/module/Module_generated_class_constructor.h            |   76 
 inst/include/Rcpp/module/Module_generated_class_factory.h                |   76 
 inst/include/Rcpp/module/Module_generated_ctor_signature.h               |   18 
 inst/include/Rcpp/module/Module_generated_function.h                     |  266 -
 inst/include/Rcpp/module/Module_generated_get_signature.h                |  136 
 inst/include/Rcpp/module/Module_generated_method.h                       |  268 -
 inst/include/Rcpp/module/class.h                                         |  254 -
 inst/include/Rcpp/module/class_Base.h                                    |   42 
 inst/include/Rcpp/module/get_return_type.h                               |    8 
 inst/include/Rcpp/platform/compiler.h                                    |    4 
 inst/include/Rcpp/platform/solaris.h                                     |   42 
 inst/include/Rcpp/protection/Armor.h                                     |   26 
 inst/include/Rcpp/protection/Shelter.h                                   |   14 
 inst/include/Rcpp/proxy/AttributeProxy.h                                 |   52 
 inst/include/Rcpp/proxy/Binding.h                                        |   70 
 inst/include/Rcpp/proxy/DottedPairProxy.h                                |   58 
 inst/include/Rcpp/proxy/FieldProxy.h                                     |   46 
 inst/include/Rcpp/proxy/GenericProxy.h                                   |    4 
 inst/include/Rcpp/proxy/NamesProxy.h                                     |   44 
 inst/include/Rcpp/proxy/ProtectedProxy.h                                 |   46 
 inst/include/Rcpp/proxy/RObjectMethods.h                                 |   20 
 inst/include/Rcpp/proxy/SlotProxy.h                                      |   48 
 inst/include/Rcpp/proxy/TagProxy.h                                       |   52 
 inst/include/Rcpp/r_cast.h                                               |   63 
 inst/include/Rcpp/routines.h                                             |   86 
 inst/include/Rcpp/sprintf.h                                              |    2 
 inst/include/Rcpp/stats/cauchy.h                                         |    2 
 inst/include/Rcpp/stats/chisq.h                                          |    2 
 inst/include/Rcpp/stats/dpq/dpq.h                                        |  160 
 inst/include/Rcpp/stats/dpq/macros.h                                     |    2 
 inst/include/Rcpp/stats/exp.h                                            |   20 
 inst/include/Rcpp/stats/f.h                                              |    2 
 inst/include/Rcpp/stats/gamma.h                                          |   10 
 inst/include/Rcpp/stats/geom.h                                           |    2 
 inst/include/Rcpp/stats/hyper.h                                          |    2 
 inst/include/Rcpp/stats/lnorm.h                                          |    6 
 inst/include/Rcpp/stats/logis.h                                          |   14 
 inst/include/Rcpp/stats/nbeta.h                                          |    2 
 inst/include/Rcpp/stats/nbinom.h                                         |    4 
 inst/include/Rcpp/stats/nbinom_mu.h                                      |    2 
 inst/include/Rcpp/stats/nchisq.h                                         |    2 
 inst/include/Rcpp/stats/nf.h                                             |    2 
 inst/include/Rcpp/stats/norm.h                                           |    6 
 inst/include/Rcpp/stats/nt.h                                             |    2 
 inst/include/Rcpp/stats/random/random.h                                  |   68 
 inst/include/Rcpp/stats/random/rbeta.h                                   |   12 
 inst/include/Rcpp/stats/random/rbinom.h                                  |   10 
 inst/include/Rcpp/stats/random/rcauchy.h                                 |   24 
 inst/include/Rcpp/stats/random/rchisq.h                                  |   14 
 inst/include/Rcpp/stats/random/rexp.h                                    |   14 
 inst/include/Rcpp/stats/random/rf.h                                      |   30 
 inst/include/Rcpp/stats/random/rgamma.h                                  |   10 
 inst/include/Rcpp/stats/random/rgeom.h                                   |   12 
 inst/include/Rcpp/stats/random/rhyper.h                                  |   10 
 inst/include/Rcpp/stats/random/rlnorm.h                                  |   30 
 inst/include/Rcpp/stats/random/rlogis.h                                  |   30 
 inst/include/Rcpp/stats/random/rnbinom.h                                 |   14 
 inst/include/Rcpp/stats/random/rnbinom_mu.h                              |   14 
 inst/include/Rcpp/stats/random/rnchisq.h                                 |   14 
 inst/include/Rcpp/stats/random/rnorm.h                                   |   40 
 inst/include/Rcpp/stats/random/rpois.h                                   |    8 
 inst/include/Rcpp/stats/random/rsignrank.h                               |    6 
 inst/include/Rcpp/stats/random/rt.h                                      |   14 
 inst/include/Rcpp/stats/random/runif.h                                   |   20 
 inst/include/Rcpp/stats/random/rweibull.h                                |   28 
 inst/include/Rcpp/stats/random/rwilcox.h                                 |    8 
 inst/include/Rcpp/stats/unif.h                                           |   12 
 inst/include/Rcpp/stats/weibull.h                                        |    4 
 inst/include/Rcpp/storage/NoProtectStorage.h                             |   32 
 inst/include/Rcpp/storage/PreserveStorage.h                              |   28 
 inst/include/Rcpp/sugar/Range.h                                          |   24 
 inst/include/Rcpp/sugar/block/SugarBlock_1.h                             |   12 
 inst/include/Rcpp/sugar/block/SugarBlock_2.h                             |   34 
 inst/include/Rcpp/sugar/block/SugarBlock_3.h                             |   44 
 inst/include/Rcpp/sugar/block/SugarMath.h                                |   46 
 inst/include/Rcpp/sugar/block/Vectorized_Math.h                          |   20 
 inst/include/Rcpp/sugar/functions/Lazy.h                                 |    2 
 inst/include/Rcpp/sugar/functions/all.h                                  |   16 
 inst/include/Rcpp/sugar/functions/any.h                                  |   16 
 inst/include/Rcpp/sugar/functions/clamp.h                                |   30 
 inst/include/Rcpp/sugar/functions/complex.h                              |   54 
 inst/include/Rcpp/sugar/functions/cumsum.h                               |   14 
 inst/include/Rcpp/sugar/functions/diff.h                                 |   40 
 inst/include/Rcpp/sugar/functions/duplicated.h                           |    2 
 inst/include/Rcpp/sugar/functions/head.h                                 |   16 
 inst/include/Rcpp/sugar/functions/ifelse.h                               |  252 -
 inst/include/Rcpp/sugar/functions/is_finite.h                            |   12 
 inst/include/Rcpp/sugar/functions/is_infinite.h                          |   12 
 inst/include/Rcpp/sugar/functions/is_na.h                                |   32 
 inst/include/Rcpp/sugar/functions/is_nan.h                               |   12 
 inst/include/Rcpp/sugar/functions/lapply.h                               |   18 
 inst/include/Rcpp/sugar/functions/mapply/mapply_2.h                      |   70 
 inst/include/Rcpp/sugar/functions/mapply/mapply_3.h                      |   42 
 inst/include/Rcpp/sugar/functions/match.h                                |    2 
 inst/include/Rcpp/sugar/functions/max.h                                  |   18 
 inst/include/Rcpp/sugar/functions/mean.h                                 |    6 
 inst/include/Rcpp/sugar/functions/min.h                                  |   18 
 inst/include/Rcpp/sugar/functions/na_omit.h                              |   18 
 inst/include/Rcpp/sugar/functions/pmax.h                                 |   76 
 inst/include/Rcpp/sugar/functions/pmin.h                                 |   74 
 inst/include/Rcpp/sugar/functions/pow.h                                  |   20 
 inst/include/Rcpp/sugar/functions/range.h                                |   24 
 inst/include/Rcpp/sugar/functions/rep.h                                  |   14 
 inst/include/Rcpp/sugar/functions/rep_each.h                             |    4 
 inst/include/Rcpp/sugar/functions/rep_len.h                              |   10 
 inst/include/Rcpp/sugar/functions/rev.h                                  |   12 
 inst/include/Rcpp/sugar/functions/sapply.h                               |   54 
 inst/include/Rcpp/sugar/functions/sd.h                                   |    8 
 inst/include/Rcpp/sugar/functions/self_match.h                           |   26 
 inst/include/Rcpp/sugar/functions/seq_along.h                            |    6 
 inst/include/Rcpp/sugar/functions/setdiff.h                              |   78 
 inst/include/Rcpp/sugar/functions/sign.h                                 |   10 
 inst/include/Rcpp/sugar/functions/strings/collapse.h                     |   12 
 inst/include/Rcpp/sugar/functions/sum.h                                  |   20 
 inst/include/Rcpp/sugar/functions/table.h                                |   40 
 inst/include/Rcpp/sugar/functions/tail.h                                 |   16 
 inst/include/Rcpp/sugar/functions/unique.h                               |   16 
 inst/include/Rcpp/sugar/functions/var.h                                  |    8 
 inst/include/Rcpp/sugar/functions/which_max.h                            |   24 
 inst/include/Rcpp/sugar/functions/which_min.h                            |   24 
 inst/include/Rcpp/sugar/logical/SingleLogicalResult.h                    |   34 
 inst/include/Rcpp/sugar/logical/and.h                                    |  164 
 inst/include/Rcpp/sugar/logical/can_have_na.h                            |    2 
 inst/include/Rcpp/sugar/logical/is.h                                     |    6 
 inst/include/Rcpp/sugar/logical/logical.h                                |    2 
 inst/include/Rcpp/sugar/logical/not.h                                    |   14 
 inst/include/Rcpp/sugar/logical/or.h                                     |  168 
 inst/include/Rcpp/sugar/matrix/as_vector.h                               |   16 
 inst/include/Rcpp/sugar/matrix/col.h                                     |   16 
 inst/include/Rcpp/sugar/matrix/diag.h                                    |   26 
 inst/include/Rcpp/sugar/matrix/lower_tri.h                               |   24 
 inst/include/Rcpp/sugar/matrix/outer.h                                   |   36 
 inst/include/Rcpp/sugar/matrix/row.h                                     |   14 
 inst/include/Rcpp/sugar/matrix/tools.h                                   |    4 
 inst/include/Rcpp/sugar/matrix/upper_tri.h                               |   22 
 inst/include/Rcpp/sugar/nona/nona.h                                      |   32 
 inst/include/Rcpp/sugar/operators/Comparator.h                           |   44 
 inst/include/Rcpp/sugar/operators/Comparator_With_One_Value.h            |   44 
 inst/include/Rcpp/sugar/operators/divides.h                              |  261 -
 inst/include/Rcpp/sugar/operators/logical_operators__Vector__Vector.h    |  126 
 inst/include/Rcpp/sugar/operators/logical_operators__Vector__primitive.h |  248 -
 inst/include/Rcpp/sugar/operators/minus.h                                |  259 -
 inst/include/Rcpp/sugar/operators/not.h                                  |   22 
 inst/include/Rcpp/sugar/operators/operators.h                            |    4 
 inst/include/Rcpp/sugar/operators/plus.h                                 |  337 -
 inst/include/Rcpp/sugar/operators/r_binary_op.h                          |    2 
 inst/include/Rcpp/sugar/operators/times.h                                |  301 -
 inst/include/Rcpp/sugar/operators/unary_minus.h                          |   40 
 inst/include/Rcpp/sugar/sets.h                                           |   20 
 inst/include/Rcpp/sugar/tools/iterator.h                                 |   56 
 inst/include/Rcpp/sugar/undoRmath.h                                      |  248 -
 inst/include/Rcpp/traits/char_type.h                                     |   12 
 inst/include/Rcpp/traits/expands_to_logical.h                            |   16 
 inst/include/Rcpp/traits/get_na.h                                        |    6 
 inst/include/Rcpp/traits/has_iterator.h                                  |   30 
 inst/include/Rcpp/traits/has_na.h                                        |    6 
 inst/include/Rcpp/traits/if_.h                                           |    8 
 inst/include/Rcpp/traits/init_type.h                                     |    2 
 inst/include/Rcpp/traits/integral_constant.h                             |    8 
 inst/include/Rcpp/traits/is_const.h                                      |    6 
 inst/include/Rcpp/traits/is_convertible.h                                |   10 
 inst/include/Rcpp/traits/is_eigen_base.h                                 |    6 
 inst/include/Rcpp/traits/is_finite.h                                     |   34 
 inst/include/Rcpp/traits/is_infinite.h                                   |   18 
 inst/include/Rcpp/traits/is_module_object.h                              |    6 
 inst/include/Rcpp/traits/is_na.h                                         |   36 
 inst/include/Rcpp/traits/is_nan.h                                        |   20 
 inst/include/Rcpp/traits/is_pointer.h                                    |    6 
 inst/include/Rcpp/traits/is_primitive.h                                  |    4 
 inst/include/Rcpp/traits/is_reference.h                                  |    6 
 inst/include/Rcpp/traits/is_sugar_expression.h                           |   12 
 inst/include/Rcpp/traits/is_trivial.h                                    |    2 
 inst/include/Rcpp/traits/is_wide_string.h                                |    8 
 inst/include/Rcpp/traits/longlong.h                                      |    4 
 inst/include/Rcpp/traits/matrix_interface.h                              |   12 
 inst/include/Rcpp/traits/module_wrap_traits.h                            |    8 
 inst/include/Rcpp/traits/named_object.h                                  |   18 
 inst/include/Rcpp/traits/num2type.h                                      |    2 
 inst/include/Rcpp/traits/r_sexptype_traits.h                             |    6 
 inst/include/Rcpp/traits/r_type_traits.h                                 |   32 
 inst/include/Rcpp/traits/remove_const.h                                  |    6 
 inst/include/Rcpp/traits/remove_const_and_reference.h                    |    6 
 inst/include/Rcpp/traits/remove_reference.h                              |    6 
 inst/include/Rcpp/traits/result_of.h                                     |    2 
 inst/include/Rcpp/traits/same_type.h                                     |    2 
 inst/include/Rcpp/traits/storage_type.h                                  |   14 
 inst/include/Rcpp/traits/traits.h                                        |    5 
 inst/include/Rcpp/traits/un_pointer.h                                    |    8 
 inst/include/Rcpp/traits/wrap_type_traits.h                              |    4 
 inst/include/Rcpp/vector/00_forward_Vector.h                             |    2 
 inst/include/Rcpp/vector/00_forward_proxy.h                              |   10 
 inst/include/Rcpp/vector/ChildVector.h                                   |only
 inst/include/Rcpp/vector/LazyVector.h                                    |   16 
 inst/include/Rcpp/vector/ListOf.h                                        |only
 inst/include/Rcpp/vector/Matrix.h                                        |   82 
 inst/include/Rcpp/vector/MatrixBase.h                                    |   46 
 inst/include/Rcpp/vector/MatrixColumn.h                                  |   44 
 inst/include/Rcpp/vector/MatrixRow.h                                     |   94 
 inst/include/Rcpp/vector/RangeIndexer.h                                  |   34 
 inst/include/Rcpp/vector/SubMatrix.h                                     |   24 
 inst/include/Rcpp/vector/Subsetter.h                                     |  130 
 inst/include/Rcpp/vector/Vector.h                                        |  357 -
 inst/include/Rcpp/vector/VectorBase.h                                    |   44 
 inst/include/Rcpp/vector/const_generic_proxy.h                           |   42 
 inst/include/Rcpp/vector/const_string_proxy.h                            |   90 
 inst/include/Rcpp/vector/converter.h                                     |   26 
 inst/include/Rcpp/vector/generic_proxy.h                                 |   58 
 inst/include/Rcpp/vector/instantiation.h                                 |   16 
 inst/include/Rcpp/vector/no_init.h                                       |   20 
 inst/include/Rcpp/vector/proxy.h                                         |   70 
 inst/include/Rcpp/vector/string_proxy.h                                  |  122 
 inst/include/Rcpp/vector/swap.h                                          |    4 
 inst/include/Rcpp/vector/traits.h                                        |   26 
 inst/include/Rcpp/vector/vector_from_string.h                            |   13 
 inst/include/RcppCommon.h                                                |   40 
 inst/include/doxygen/Examples.h                                          |   30 
 inst/skeleton/Num.cpp                                                    |    4 
 inst/skeleton/rcpp_hello_world.cpp                                       |    4 
 inst/skeleton/rcpp_hello_world.h                                         |    4 
 inst/skeleton/rcpp_hello_world_attributes.cpp                            |    4 
 inst/skeleton/rcpp_module.cpp                                            |   24 
 inst/skeleton/stdVector.cpp                                              |   18 
 inst/unitTests/RcppTestA/src/rcpp_hello_world.cpp                        |    2 
 inst/unitTests/cpp/Environment.cpp                                       |    2 
 inst/unitTests/cpp/ListOf.cpp                                            |only
 inst/unitTests/cpp/Module.cpp                                            |   66 
 inst/unitTests/cpp/RObject.cpp                                           |    8 
 inst/unitTests/cpp/String.cpp                                            |   16 
 inst/unitTests/cpp/Subset.cpp                                            |    5 
 inst/unitTests/cpp/Vector.cpp                                            |  190 
 inst/unitTests/cpp/XPtr.cpp                                              |    4 
 inst/unitTests/cpp/attributes.cpp                                        |only
 inst/unitTests/cpp/language.cpp                                          |   10 
 inst/unitTests/cpp/misc.cpp                                              |   62 
 inst/unitTests/cpp/modref.cpp                                            |    6 
 inst/unitTests/cpp/stats.cpp                                             |    2 
 inst/unitTests/cpp/sugar.cpp                                             |    8 
 inst/unitTests/cpp/wrap.cpp                                              |   18 
 inst/unitTests/cpp/wstring.cpp                                           |   14 
 inst/unitTests/runit.ListOf.R                                            |only
 inst/unitTests/runit.attributes.R                                        |only
 inst/unitTests/testRcppClass/src/Num.cpp                                 |    2 
 inst/unitTests/testRcppClass/src/rcpp_hello_world.cpp                    |    4 
 inst/unitTests/testRcppClass/src/rcpp_module.cpp                         |   14 
 inst/unitTests/testRcppClass/src/stdVector.cpp                           |   16 
 inst/unitTests/testRcppModule/src/Num.cpp                                |    4 
 inst/unitTests/testRcppModule/src/rcpp_hello_world.cpp                   |    4 
 inst/unitTests/testRcppModule/src/rcpp_module.cpp                        |   10 
 inst/unitTests/testRcppModule/src/stdVector.cpp                          |   18 
 man/cppFunction.Rd                                                       |    2 
 src/Date.cpp                                                             |   38 
 src/Module.cpp                                                           |   54 
 src/Rcpp_init.cpp                                                        |   36 
 src/api.cpp                                                              |  102 
 src/attributes.cpp                                                       | 1534 +++----
 src/barrier.cpp                                                          |   60 
 src/internal.h                                                           |    4 
 tests/doRUnit.R                                                          |    6 
 vignettes/Rcpp-attributes.Rnw                                            |    2 
 vignettes/Rcpp-package.Rnw                                               |    2 
 vignettes/Rcpp-sugar.Rnw                                                 |    7 
 402 files changed, 11311 insertions(+), 11018 deletions(-)

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Package rmngb updated to version 0.4-1 with previous version 0.3-1 dated 2014-04-26

Title: rmngb Miscellaneous
Description: A collection of miscellaneous functions. Exploratory data analysis, multidimensional visualization, medico-economic simulation, multiple testing...
Author: Antoine Filipovic Pierucci
Maintainer: Antoine Filipovic Pierucci

Diff between rmngb versions 0.3-1 dated 2014-04-26 and 0.4-1 dated 2014-06-08

 rmngb-0.3-1/rmngb/man/reverse.Rd     |only
 rmngb-0.4-1/rmngb/DESCRIPTION        |    8 ++++----
 rmngb-0.4-1/rmngb/MD5                |   12 ++++++++----
 rmngb-0.4-1/rmngb/NEWS               |    8 ++++++++
 rmngb-0.4-1/rmngb/R/listOperations.R |only
 rmngb-0.4-1/rmngb/R/utils.R          |   12 ++++++------
 rmngb-0.4-1/rmngb/man/colClasses.Rd  |only
 rmngb-0.4-1/rmngb/man/nDistinct.Rd   |only
 rmngb-0.4-1/rmngb/man/outerList.Rd   |only
 rmngb-0.4-1/rmngb/man/zipLists.Rd    |only
 10 files changed, 26 insertions(+), 14 deletions(-)

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New package rdrobust with initial version 0.5
Package: rdrobust
Type: Package
Title: Robust data-driven statistical inference in Regression-Discontinuity designs
Version: 0.5
Date: 2014-06-06
Author: Sebastian Calonico , Matias D. Cattaneo , Rocio Titiunik
Maintainer: Sebastian Calonico
Description: Regression-discontinuity (RD) designs are quasi-experimental research designs popular in social, behavioral and natural sciences. The RD design is usually employed to study the (local) causal effect of a treatment, intervention or policy. This package provides tools for data-driven graphical and analytical statistical inference in RD designs: rdrobust to construct local-polynomial point estimators and robust confidence intervals for average treatment effects at the cutoff in Sharp, Fuzzy and Kink RD settings, rdbwselect to perform bandwidth selection for the different procedures implemented, and rdbinselect to conduct exploratory data analysis (RD plots).
Depends: R (>= 3.0.2)
License: GPL-2
Packaged: 2014-06-08 00:35:40 UTC; Sebastian
NeedsCompilation: no
Repository: CRAN
Date/Publication: 2014-06-08 12:35:04

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Package Luminescence updated to version 0.3.4 with previous version 0.3.3 dated 2014-04-14

Title: Package for Luminescence Dating data analysis
Description: Package provides a collection of various R functions for Luminescence Dating data analysis.
Author: Sebastian Kreutzer [aut, trl, cre], Christoph Schmidt [aut], Margret C. Fuchs [aut], Michael Dietze [aut], Manfred Fischer [aut, trl], Christoph Burow [aut], Markus Fuchs [ths]
Maintainer: Sebastian Kreutzer

Diff between Luminescence versions 0.3.3 dated 2014-04-14 and 0.3.4 dated 2014-06-08

 Luminescence-0.3.3/Luminescence/inst/doc/S4-class_objects.pdf     |only
 Luminescence-0.3.4/Luminescence/DESCRIPTION                       |   15 
 Luminescence-0.3.4/Luminescence/MD5                               |   73 
 Luminescence-0.3.4/Luminescence/NEWS                              |   75 
 Luminescence-0.3.4/Luminescence/R/analyse_SAR.CWOSL.R             |   21 
 Luminescence-0.3.4/Luminescence/R/apply_CosmicRayRemoval.R        |   55 
 Luminescence-0.3.4/Luminescence/R/calc_CentralDose.R              |  540 +-
 Luminescence-0.3.4/Luminescence/R/calc_FiniteMixture.R            | 1855 +++++-----
 Luminescence-0.3.4/Luminescence/R/plot_AbanicoPlot.R              |   43 
 Luminescence-0.3.4/Luminescence/R/plot_GrowthCurve.R              |  107 
 Luminescence-0.3.4/Luminescence/R/plot_KDE.R                      |  112 
 Luminescence-0.3.4/Luminescence/R/plot_RLum.Data.Spectrum.R       |    6 
 Luminescence-0.3.4/Luminescence/R/plot_RadialPlot.R               |   15 
 Luminescence-0.3.4/Luminescence/R/readXSYG2R.R                    |   14 
 Luminescence-0.3.4/Luminescence/inst/NEWS.Rd                      |   87 
 Luminescence-0.3.4/Luminescence/inst/doc/S4classObjects.pdf       |only
 Luminescence-0.3.4/Luminescence/inst/doc/index.html               |only
 Luminescence-0.3.4/Luminescence/man/BaseDataSet.CosmicDoseRate.Rd |    1 
 Luminescence-0.3.4/Luminescence/man/ExampleData.BINfileData.Rd    |    4 
 Luminescence-0.3.4/Luminescence/man/ExampleData.CW_OSL_Curve.Rd   |    3 
 Luminescence-0.3.4/Luminescence/man/ExampleData.DeValues.Rd       |    8 
 Luminescence-0.3.4/Luminescence/man/ExampleData.FittingLM.Rd      |    8 
 Luminescence-0.3.4/Luminescence/man/ExampleData.LxTxData.Rd       |    6 
 Luminescence-0.3.4/Luminescence/man/ExampleData.LxTxOSLData.Rd    |    6 
 Luminescence-0.3.4/Luminescence/man/ExampleData.RLum.Analysis.Rd  |    7 
 Luminescence-0.3.4/Luminescence/man/ExampleData.XSYG.Rd           |    7 
 Luminescence-0.3.4/Luminescence/man/Luminescence-package.Rd       |   10 
 Luminescence-0.3.4/Luminescence/man/Risoe.BINfileData-class.Rd    |    2 
 Luminescence-0.3.4/Luminescence/man/analyse_SAR.CWOSL.Rd          |  196 -
 Luminescence-0.3.4/Luminescence/man/analyse_SAR.TL.Rd             |    2 
 Luminescence-0.3.4/Luminescence/man/apply_CosmicRayRemoval.Rd     |   10 
 Luminescence-0.3.4/Luminescence/man/calc_CentralDose.Rd           |    2 
 Luminescence-0.3.4/Luminescence/man/calc_FiniteMixture.Rd         |    8 
 Luminescence-0.3.4/Luminescence/man/plot_AbanicoPlot.Rd           |    4 
 Luminescence-0.3.4/Luminescence/man/plot_GrowthCurve.Rd           |   13 
 Luminescence-0.3.4/Luminescence/man/plot_KDE.Rd                   |    2 
 Luminescence-0.3.4/Luminescence/man/plot_RLum.Data.Spectrum.Rd    |    2 
 Luminescence-0.3.4/Luminescence/man/plot_RadialPlot.Rd            |    8 
 Luminescence-0.3.4/Luminescence/man/readXSYG2R.Rd                 |    2 
 39 files changed, 1767 insertions(+), 1562 deletions(-)

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