Title: A wrapper algorithm for all-relevant feature selection
Description: Boruta is an all-relevant feature selection wrapper algorithm.
It finds relevant features by comparing original attributes'
importance with importance achievable at random, estimated
using their permuted copies.
Author: Miron Bartosz Kursa [aut, cre],
Witold Remigiusz Rudnicki [aut]
Maintainer: Miron Bartosz Kursa
Diff between Boruta versions 3.0.0 dated 2013-12-03 and 3.1.0 dated 2014-06-08
DESCRIPTION | 7 +- MD5 | 30 +++++----- NAMESPACE | 16 +++-- R/Boruta.R | 57 +++++++++++-------- R/TentativeRoughFix.R | 2 R/plot.Boruta.R | 4 - inst/NEWS | 4 + man/Boruta.Rd | 127 +++++++++++++++---------------------------- man/TentativeRoughFix.Rd | 48 ++++++++-------- man/attStats.Rd | 26 +++----- man/getImpFerns.Rd | 23 ++----- man/getImpRf.Rd | 24 +++----- man/getSelectedAttributes.Rd | 15 ++--- man/plot.Boruta.Rd | 48 ++++++---------- man/plotImpHistory.Rd | 49 ++++++---------- man/print.Boruta.Rd | 14 ++-- 16 files changed, 218 insertions(+), 276 deletions(-)
More information about berryFunctions at CRAN
Permanent link
Title: Synthetic Likelihood methods for intractable likelihoods.
Description: Framework to perform synthetic likelihood inference
for models where the likelihood function is unavailable or
intractable.
Author: Matteo Fasiolo and Simon Wood
Maintainer: Matteo Fasiolo
Diff between synlik versions 0.1.0 dated 2014-03-20 and 0.1.1 dated 2014-06-08
synlik-0.1.0/synlik/vignettes/figure |only synlik-0.1.1/synlik/DESCRIPTION | 7 - synlik-0.1.1/synlik/MD5 | 113 +++----------------------- synlik-0.1.1/synlik/NEWS |only synlik-0.1.1/synlik/R/I_empDens.R | 2 synlik-0.1.1/synlik/build/vignette.rds |binary synlik-0.1.1/synlik/data/bf1.rda |binary synlik-0.1.1/synlik/data/bf2.rda |binary synlik-0.1.1/synlik/data/bf3.rda |binary synlik-0.1.1/synlik/data/blow_sl.RData |binary synlik-0.1.1/synlik/data/blow_smcmc.RData |binary synlik-0.1.1/synlik/data/ricker_sl.RData |binary synlik-0.1.1/synlik/data/ricker_smcmc.RData |binary synlik-0.1.1/synlik/inst/doc/synlik.html | 34 +++---- synlik-0.1.1/synlik/src/checkBounds.cpp | 2 synlik-0.1.1/synlik/src/cleanStats.cpp | 2 synlik-0.1.1/synlik/src/simple_simulators.cpp | 2 17 files changed, 40 insertions(+), 122 deletions(-)
Title: Extra functions to cut, label and colour dendrogram clusters
Description: This package provides extra functions to manipulate dendrograms
that build on the base functions provided by the stats package. The main
functionality it is designed to add is the ability to colour all the edges
in an object of class dendrogram according to cluster membership i.e. each
subtree is coloured, not just the terminal leaves. In addition it provides
some utility functions to cut dendrogram and hclust objects and to set/get
labels.
Author: Gregory Jefferis
Maintainer: Gregory Jefferis
Diff between dendroextras versions 0.1-4 dated 2014-03-03 and 0.2 dated 2014-06-08
DESCRIPTION | 8 ++++---- MD5 | 26 +++++++++++++------------- NAMESPACE | 2 ++ NEWS | 7 +++++++ R/colour_clusters.R | 12 +++++++++++- R/dendroextras-package.R | 24 +++++++++++++++++++++++- inst/tests/test-colour-clusters.R | 17 +++++++++++++++++ man/colour_clusters.Rd | 33 +++++++++++++++------------------ man/dendroextras-package.Rd | 34 ++++++++++++++++++++++++++++++---- man/labels-assign.Rd | 8 ++++---- man/labels.hclust.Rd | 13 +++++++------ man/leaf_colours.Rd | 9 ++++----- man/set_leaf_colours.Rd | 10 +++++----- man/slice.Rd | 18 ++++++++---------- 14 files changed, 150 insertions(+), 71 deletions(-)
Title: Dynamic generation of scientific reports
Description: The RSP markup language makes any text-based document come alive. RSP provides a powerful markup for controlling the content and output of LaTeX, HTML, Markdown, AsciiDoc, Sweave and knitr documents (and more), e.g. 'Today's date is <%=Sys.Date()%>'. Contrary to many other literate programming languages, with RSP it is straightforward to loop over mixtures of code and text sections, e.g. in month-by-month summaries. RSP has also several preprocessing directives for incorporating static and dynamic contents of external files (local or online) among other things. Functions rstring() and rcat() make it easy to process RSP strings, rsource() sources an RSP file as it was an R script, while rfile() compiles it (even online) into its final output format, e.g. rfile('report.tex.rsp') generates 'report.pdf' and rfile('report.md.rsp') generates 'report.html'. RSP is ideal for self-contained scientific reports and R package vignettes. It's easy to use - if you know how to write an R script, you'll be up and running within minutes.
Author: Henrik Bengtsson [aut, cre, cph]
Maintainer: Henrik Bengtsson
Diff between R.rsp versions 0.15.0 dated 2014-02-27 and 0.19.0 dated 2014-06-08
R.rsp-0.15.0/R.rsp/R/evalWithEcho.R |only R.rsp-0.15.0/R.rsp/inst/doc/Dynamic_document_creation_using_RSP.R |only R.rsp-0.15.0/R.rsp/inst/doc/NonSweaveVignettes.R |only R.rsp-0.15.0/R.rsp/inst/doc/NonSweaveVignettes.pdf |only R.rsp-0.15.0/R.rsp/inst/doc/NonSweaveVignettes.tex.rsp |only R.rsp-0.15.0/R.rsp/inst/doc/RSP-intro.R |only R.rsp-0.15.0/R.rsp/inst/doc/RSP-refcard.R |only R.rsp-0.15.0/R.rsp/inst/tests_rsp_online |only R.rsp-0.15.0/R.rsp/vignettes/NonSweaveVignettes.tex.rsp |only R.rsp-0.19.0/R.rsp/.Rinstignore | 2 R.rsp-0.19.0/R.rsp/DESCRIPTION | 22 - R.rsp-0.19.0/R.rsp/MD5 | 200 +++++----- R.rsp-0.19.0/R.rsp/NAMESPACE | 15 R.rsp-0.19.0/R.rsp/NEWS | 111 +++++ R.rsp-0.19.0/R.rsp/R/999.NonDocumentedObjects.R | 1 R.rsp-0.19.0/R.rsp/R/999.package.R | 20 - R.rsp-0.19.0/R.rsp/R/HttpDaemon.R | 2 R.rsp-0.19.0/R.rsp/R/RspDirective.R | 11 R.rsp-0.19.0/R.rsp/R/RspDocument.R | 38 + R.rsp-0.19.0/R.rsp/R/RspFileProduct.R | 61 ++- R.rsp-0.19.0/R.rsp/R/RspParser.R | 10 R.rsp-0.19.0/R.rsp/R/RspProduct.R | 18 R.rsp-0.19.0/R.rsp/R/RspRSourceCode.R | 2 R.rsp-0.19.0/R.rsp/R/RspRSourceCodeFactory.R | 45 +- R.rsp-0.19.0/R.rsp/R/RspSourceCodeFactory.R | 8 R.rsp-0.19.0/R.rsp/R/RspString.R | 16 R.rsp-0.19.0/R.rsp/R/buildNonSweaveVignette.R | 32 + R.rsp-0.19.0/R.rsp/R/buildVignette.R | 4 R.rsp-0.19.0/R.rsp/R/compileAsciiDoc.R | 17 R.rsp-0.19.0/R.rsp/R/compileAsciiDocNoweb.R | 17 R.rsp-0.19.0/R.rsp/R/compileKnitr.R | 17 R.rsp-0.19.0/R.rsp/R/compileLaTeX.R | 174 ++++++++ R.rsp-0.19.0/R.rsp/R/compileMarkdown.R | 17 R.rsp-0.19.0/R.rsp/R/compileRnw.R | 30 + R.rsp-0.19.0/R.rsp/R/compileRsp.R | 16 R.rsp-0.19.0/R.rsp/R/compileSweave.R | 15 R.rsp-0.19.0/R.rsp/R/parseInternetMediaType.R | 4 R.rsp-0.19.0/R.rsp/R/parseRsp.R | 2 R.rsp-0.19.0/R.rsp/R/rargs.R | 2 R.rsp-0.19.0/R.rsp/R/rcat.R | 1 R.rsp-0.19.0/R.rsp/R/rclean.R | 1 R.rsp-0.19.0/R.rsp/R/rcompile.R | 142 ++++++- R.rsp-0.19.0/R.rsp/R/rfile.R | 56 ++ R.rsp-0.19.0/R.rsp/R/rscript.R | 141 ++++++- R.rsp-0.19.0/R.rsp/R/rsptex.R | 4 R.rsp-0.19.0/R.rsp/R/rstring.R | 1 R.rsp-0.19.0/R.rsp/R/typeOfRnw.R | 15 R.rsp-0.19.0/R.rsp/R/xweavetangle.R | 152 +++++-- R.rsp-0.19.0/R.rsp/R/zzz.R | 21 - R.rsp-0.19.0/R.rsp/build/vignette.rds |binary R.rsp-0.19.0/R.rsp/inst/doc/Dynamic_document_creation_using_RSP.pdf |binary R.rsp-0.19.0/R.rsp/inst/doc/Dynamic_document_creation_using_RSP.tex.rsp | 23 - R.rsp-0.19.0/R.rsp/inst/doc/RSP-intro.html | 41 +- R.rsp-0.19.0/R.rsp/inst/doc/RSP-intro.md.rsp | 7 R.rsp-0.19.0/R.rsp/inst/doc/RSP-refcard.pdf |binary R.rsp-0.19.0/R.rsp/inst/doc/RSP-refcard.tex.rsp | 2 R.rsp-0.19.0/R.rsp/inst/doc/R_packages-RSP_vignettes.html |only R.rsp-0.19.0/R.rsp/inst/doc/R_packages-RSP_vignettes.md.rsp |only R.rsp-0.19.0/R.rsp/inst/doc/R_packages-Static_PDF_and_HTML_vignettes.pdf |only R.rsp-0.19.0/R.rsp/inst/doc/R_packages-Static_PDF_and_HTML_vignettes.pdf.asis |only R.rsp-0.19.0/R.rsp/inst/doc/R_packages-Vignettes_prior_to_R300.pdf |only R.rsp-0.19.0/R.rsp/inst/doc/R_packages-Vignettes_prior_to_R300.tex.rsp |only R.rsp-0.19.0/R.rsp/inst/doc/templates/Makefile | 5 R.rsp-0.19.0/R.rsp/inst/doc/templates/enginesMap.R | 29 + R.rsp-0.19.0/R.rsp/inst/rsp_LoremIpsum/LoremIpsum.knitr.Rnw | 2 R.rsp-0.19.0/R.rsp/inst/rsp_LoremIpsum/LoremIpsum.tex.rsp | 2 R.rsp-0.19.0/R.rsp/inst/rsp_examples/LoremIpsum.tex.rsp | 2 R.rsp-0.19.0/R.rsp/inst/rsp_examples/R_packages-Static_PDF_and_HTML_vignettes.pdf.asis.rsp |only R.rsp-0.19.0/R.rsp/inst/rsp_examples/R_packages-Static_PDF_and_HTML_vignettes.tex.rsp |only R.rsp-0.19.0/R.rsp/inst/rsp_tests/R-vignette.tex.rsp | 2 R.rsp-0.19.0/R.rsp/inst/rsp_tests/multi,selfcontained.md.rsp | 4 R.rsp-0.19.0/R.rsp/inst/rsp_tests/variables.txt.rsp | 16 R.rsp-0.19.0/R.rsp/inst/rsp_tests_online |only R.rsp-0.19.0/R.rsp/man/FileRspResponse.Rd | 2 R.rsp-0.19.0/R.rsp/man/HtmlRspLanguage.Rd | 2 R.rsp-0.19.0/R.rsp/man/HttpDaemon.Rd | 2 R.rsp-0.19.0/R.rsp/man/HttpDaemonRspResponse.Rd | 2 R.rsp-0.19.0/R.rsp/man/HttpRequest.Rd | 2 R.rsp-0.19.0/R.rsp/man/Non-documented_objects.Rd | 1 R.rsp-0.19.0/R.rsp/man/R.rsp-package.Rd | 24 - R.rsp-0.19.0/R.rsp/man/RRspPackage.Rd | 2 R.rsp-0.19.0/R.rsp/man/RspException.Rd | 2 R.rsp-0.19.0/R.rsp/man/RspLanguage.Rd | 2 R.rsp-0.19.0/R.rsp/man/RspPage.Rd | 2 R.rsp-0.19.0/R.rsp/man/RspResponse.Rd | 2 R.rsp-0.19.0/R.rsp/man/buildNonSweaveTexToPdf.Rd | 2 R.rsp-0.19.0/R.rsp/man/compileRnw.Rd | 7 R.rsp-0.19.0/R.rsp/man/getMetadata.RspDocument.Rd | 2 R.rsp-0.19.0/R.rsp/man/getMetadata.RspProduct.Rd | 2 R.rsp-0.19.0/R.rsp/man/getMetadata.RspString.Rd | 2 R.rsp-0.19.0/R.rsp/man/getType.RspProduct.Rd | 2 R.rsp-0.19.0/R.rsp/man/makeSourceCode.RspSourceCodeFactory.Rd | 3 R.rsp-0.19.0/R.rsp/man/rcompile.Rd | 19 R.rsp-0.19.0/R.rsp/man/rfile.Rd | 2 R.rsp-0.19.0/R.rsp/man/rscript.Rd | 20 - R.rsp-0.19.0/R.rsp/man/rspTangle.Rd | 4 R.rsp-0.19.0/R.rsp/man/rspWeave.Rd | 9 R.rsp-0.19.0/R.rsp/tests/LoremIpsum.R | 1 R.rsp-0.19.0/R.rsp/tests/compileLaTeX.R | 14 R.rsp-0.19.0/R.rsp/tests/deparse.R | 2 R.rsp-0.19.0/R.rsp/tests/rcat.R | 8 R.rsp-0.19.0/R.rsp/tests/rcompile.R | 2 R.rsp-0.19.0/R.rsp/tests/rscript.R |only R.rsp-0.19.0/R.rsp/tests/rsp_tests_online.R |only R.rsp-0.19.0/R.rsp/vignettes/Dynamic_document_creation_using_RSP.tex.rsp | 23 - R.rsp-0.19.0/R.rsp/vignettes/RSP-intro.md.rsp | 7 R.rsp-0.19.0/R.rsp/vignettes/RSP-refcard.tex.rsp | 2 R.rsp-0.19.0/R.rsp/vignettes/R_packages-RSP_vignettes.md.rsp |only R.rsp-0.19.0/R.rsp/vignettes/R_packages-Static_PDF_and_HTML_vignettes.pdf.asis |only R.rsp-0.19.0/R.rsp/vignettes/R_packages-Vignettes_prior_to_R300.tex.rsp |only 110 files changed, 1366 insertions(+), 410 deletions(-)
Title: Numeric routines for optically stimulated luminescence dating
Description: Package for optimizing regular numeric problems in optically stimulated luminescence dating, such as: equivalent dose calculation; decay curve decomposition and fast-component equivalent dose estimation; statistical age models analysis and radial plot drawing.
Author: Peng Jun
Maintainer: Peng Jun
Diff between numOSL versions 1.3 dated 2014-04-20 and 1.4 dated 2014-06-08
numOSL-1.3/numOSL/src/diffev.f90 |only numOSL-1.3/numOSL/src/fitlm.f90 |only numOSL-1.3/numOSL/src/lmfit.f90 |only numOSL-1.3/numOSL/src/lmfunc.f90 |only numOSL-1.3/numOSL/src/lmfunc1.f90 |only numOSL-1.3/numOSL/src/targfunc.f90 |only numOSL-1.4/numOSL/DESCRIPTION | 8 numOSL-1.4/numOSL/MD5 | 30 - numOSL-1.4/numOSL/NEWS | 3 numOSL-1.4/numOSL/R/numOSL.R | 11 numOSL-1.4/numOSL/THANKS | 3 numOSL-1.4/numOSL/man/RadialPlotter.Rd | 18 numOSL-1.4/numOSL/man/fastED.Rd | 10 numOSL-1.4/numOSL/man/numOSL-package.Rd | 6 numOSL-1.4/numOSL/src/FineED.f90 | 7 numOSL-1.4/numOSL/src/FineED1.f90 | 7 numOSL-1.4/numOSL/src/decomp.f90 | 837 ++++++++++++++++++++++++++++++ numOSL-1.4/numOSL/src/decomp_Constant.f90 | 4 numOSL-1.4/numOSL/src/kmeans.f90 | 4 19 files changed, 896 insertions(+), 52 deletions(-)
Title: Methods that apply to rows and columns of a matrix
Description: This packages provides methods operating on rows and columns of matrices, e.g. col/rowMedians() and col/rowRanks(). There are also some vector-based methods, e.g. anyMissing(), weightedMedians(), and binMeans(). The objective is to have all methods being optimized for speed and memory usage.
Author: Henrik Bengtsson [aut, cre, cph], Hector Corrada Bravo [ctb], Robert Gentleman [ctb], Ola Hossjer [ctb], Harris Jaffee [ctb], Peter Langfelder [ctb]
Maintainer: Henrik Bengtsson
Diff between matrixStats versions 0.9.7 dated 2014-06-07 and 0.10.0 dated 2014-06-08
DESCRIPTION | 12 ++++++------ MD5 | 18 +++++++++--------- NEWS | 11 +++++++++++ R/rowProds.R | 15 +++++---------- man/matrixStats-package.Rd | 2 +- man/rowProds.Rd | 15 +++++---------- tests/product.R | 13 +++++++------ tests/rowMads.R | 12 ++++++------ tests/rowProds.R | 15 ++++++++------- tests/rowRanges.R | 24 ++++++++++++------------ 10 files changed, 70 insertions(+), 67 deletions(-)
Title: Seamless R and C++ Integration
Description: The Rcpp package provides R functions as well as a C++ library
which facilitate the integration of R and C++.
R data types (SEXP) are matched to C++ objects in a class hierarchy. All R
types are supported (vectors, functions, environment, etc ...) and each
type is mapped to a dedicated class. For example, numeric vectors are
represented as instances of the Rcpp::NumericVector class, environments are
represented as instances of Rcpp::Environment, functions are represented as
Rcpp::Function, etc ... The "Rcpp-introduction" vignette provides a good
entry point to Rcpp.
Conversion from C++ to R and back is driven by the templates Rcpp::wrap
and Rcpp::as which are highly flexible and extensible, as documented
in the "Rcpp-extending" vignette.
Rcpp also provides Rcpp modules, a framework that allows exposing
C++ functions and classes to the R level. The "Rcpp-modules" vignette
details the current set of features of Rcpp-modules.
Rcpp includes a concept called Rcpp sugar that brings many R functions
into C++. Sugar takes advantage of lazy evaluation and expression templates
to achieve great performance while exposing a syntax that is much nicer
to use than the equivalent low-level loop code. The "Rcpp-sugar" vignette
gives an overview of the feature.
Rcpp attributes provide a high-level syntax for declaring C++
functions as callable from R and automatically generating the code
required to invoke them. Attributes are intended to facilitate both
interactive use of C++ within R sessions as well as to support R
package development. Attributes are built on top of Rcpp modules and
their implementation is based on previous work in the inline package.
Many examples are included, and around 900 unit tests in 446 unit
test functions provide additional usage examples.
An earlier version of Rcpp, containing what we now call the 'classic Rcpp
API' was written during 2005 and 2006 by Dominick Samperi. This code has
been factored out of Rcpp into the package RcppClassic, and it is still
available for code relying on the older interface. New development should
always use this Rcpp package instead.
Additional documentation is available via the paper by Eddelbuettel and
Francois (2011, JSS) paper and the book by Eddelbuettel (2013, Springer);
see 'citation("Rcpp")' for details.
Author: Dirk Eddelbuettel, Romain Francois, JJ Allaire, Kevin Ushey,
Douglas Bates, and John Chambers
Maintainer: Dirk Eddelbuettel
Diff between Rcpp versions 0.11.1 dated 2014-03-14 and 0.11.2 dated 2014-06-08
ChangeLog | 136 DESCRIPTION | 40 MD5 | 796 +-- R/Attributes.R | 37 R/Module.R | 4 README.md | 3 build/vignette.rds |binary inst/NEWS.Rd | 32 inst/doc/Rcpp-FAQ.pdf |binary inst/doc/Rcpp-attributes.Rnw | 2 inst/doc/Rcpp-attributes.pdf |binary inst/doc/Rcpp-extending.pdf |binary inst/doc/Rcpp-introduction.pdf |binary inst/doc/Rcpp-modules.pdf |binary inst/doc/Rcpp-package.Rnw | 2 inst/doc/Rcpp-package.pdf |binary inst/doc/Rcpp-quickref.pdf |binary inst/doc/Rcpp-sugar.Rnw | 7 inst/doc/Rcpp-sugar.pdf |binary inst/doc/Rcpp-unitTests.pdf |binary inst/examples/Attributes/Export.cpp | 14 inst/examples/ConvolveBenchmarks/convolve10_cpp.cpp | 16 inst/examples/ConvolveBenchmarks/convolve10_cpp.h | 12 inst/examples/ConvolveBenchmarks/convolve11_cpp.cpp | 2 inst/examples/ConvolveBenchmarks/convolve12_cpp.cpp | 4 inst/examples/ConvolveBenchmarks/convolve13_cpp.cpp | 4 inst/examples/ConvolveBenchmarks/convolve14_cpp.cpp | 4 inst/examples/ConvolveBenchmarks/convolve3_cpp.cpp | 2 inst/examples/ConvolveBenchmarks/convolve4_cpp.cpp | 6 inst/examples/ConvolveBenchmarks/convolve5_cpp.cpp | 2 inst/examples/ConvolveBenchmarks/convolve8_cpp.cpp | 8 inst/examples/ConvolveBenchmarks/convolve9_cpp.cpp | 28 inst/examples/ConvolveBenchmarks/loopmacro.h | 2 inst/examples/SugarPerformance/Timer.h | 8 inst/include/Rcpp.h | 2 inst/include/Rcpp/Benchmark/Timer.h | 44 inst/include/Rcpp/DataFrame.h | 73 inst/include/Rcpp/Date.h | 72 inst/include/Rcpp/DateVector.h | 6 inst/include/Rcpp/Datetime.h | 36 inst/include/Rcpp/DatetimeVector.h | 6 inst/include/Rcpp/Dimension.h | 22 inst/include/Rcpp/DottedPair.h | 20 inst/include/Rcpp/DottedPairImpl.h | 40 inst/include/Rcpp/Environment.h | 131 inst/include/Rcpp/Extractor.h | 12 inst/include/Rcpp/Fast.h | 12 inst/include/Rcpp/Formula.h | 26 inst/include/Rcpp/Function.h | 34 inst/include/Rcpp/InputParameter.h | 34 inst/include/Rcpp/InternalFunction.h | 20 inst/include/Rcpp/Interrupt.h | 26 inst/include/Rcpp/Language.h | 70 inst/include/Rcpp/Module.h | 172 inst/include/Rcpp/Na_Proxy.h | 30 inst/include/Rcpp/Named.h | 24 inst/include/Rcpp/Pairlist.h | 16 inst/include/Rcpp/Promise.h | 36 inst/include/Rcpp/RObject.h | 29 inst/include/Rcpp/Reference.h | 24 inst/include/Rcpp/Rmath.h | 12 inst/include/Rcpp/S4.h | 24 inst/include/Rcpp/StretchyList.h | 38 inst/include/Rcpp/String.h | 204 inst/include/Rcpp/StringTransformer.h | 10 inst/include/Rcpp/Symbol.h | 26 inst/include/Rcpp/Vector.h | 7 inst/include/Rcpp/WeakReference.h | 12 inst/include/Rcpp/XPtr.h | 60 inst/include/Rcpp/algo.h | 16 inst/include/Rcpp/api/bones/Date.h | 10 inst/include/Rcpp/api/bones/Datetime.h | 10 inst/include/Rcpp/api/bones/bones.h | 2 inst/include/Rcpp/api/bones/wrap_extra_steps.h | 2 inst/include/Rcpp/api/meat/DataFrame.h | 4 inst/include/Rcpp/api/meat/Date.h | 10 inst/include/Rcpp/api/meat/Datetime.h | 16 inst/include/Rcpp/api/meat/Dimension.h | 8 inst/include/Rcpp/api/meat/DottedPairImpl.h | 26 inst/include/Rcpp/api/meat/Environment.h | 18 inst/include/Rcpp/api/meat/Rcpp_eval.h | 24 inst/include/Rcpp/api/meat/S4.h | 18 inst/include/Rcpp/api/meat/StretchyList.h | 8 inst/include/Rcpp/api/meat/Vector.h | 10 inst/include/Rcpp/api/meat/as.h | 8 inst/include/Rcpp/api/meat/export.h | 22 inst/include/Rcpp/api/meat/is.h | 24 inst/include/Rcpp/api/meat/meat.h | 2 inst/include/Rcpp/api/meat/module/Module.h | 6 inst/include/Rcpp/api/meat/wrap.h | 14 inst/include/Rcpp/as.h | 68 inst/include/Rcpp/barrier.h | 2 inst/include/Rcpp/clone.h | 8 inst/include/Rcpp/complex.h | 4 inst/include/Rcpp/config.h | 4 inst/include/Rcpp/exceptions.h | 88 inst/include/Rcpp/generated/DataFrame_generated.h | 40 inst/include/Rcpp/generated/Function__operator.h | 46 inst/include/Rcpp/generated/InternalFunction__ctors.h | 2 inst/include/Rcpp/generated/Language__ctors.h | 338 - inst/include/Rcpp/generated/Vector__create.h | 1384 +++--- inst/include/Rcpp/grow.h | 30 inst/include/Rcpp/hash/IndexHash.h | 82 inst/include/Rcpp/hash/SelfHash.h | 32 inst/include/Rcpp/internal/Exporter.h | 34 inst/include/Rcpp/internal/GreedyVector.h | 48 inst/include/Rcpp/internal/ListInitialization.h | 8 inst/include/Rcpp/internal/NAComparator.h | 20 inst/include/Rcpp/internal/NAEquals.h | 4 inst/include/Rcpp/internal/Proxy_Iterator.h | 22 inst/include/Rcpp/internal/SEXP_Iterator.h | 26 inst/include/Rcpp/internal/caster.h | 26 inst/include/Rcpp/internal/converter.h | 10 inst/include/Rcpp/internal/export.h | 58 inst/include/Rcpp/internal/na.h | 6 inst/include/Rcpp/internal/r_coerce.h | 114 inst/include/Rcpp/internal/r_vector.h | 32 inst/include/Rcpp/internal/wrap.h | 288 - inst/include/Rcpp/internal/wrap_end.h | 8 inst/include/Rcpp/iostream/Rstreambuf.h | 28 inst/include/Rcpp/is.h | 24 inst/include/Rcpp/lang.h | 72 inst/include/Rcpp/macros/debug.h | 26 inst/include/Rcpp/macros/dispatch.h | 6 inst/include/Rcpp/macros/interface.h | 2 inst/include/Rcpp/macros/macros.h | 8 inst/include/Rcpp/macros/module.h | 10 inst/include/Rcpp/macros/preprocessor_generated.h | 4 inst/include/Rcpp/macros/unroll.h | 2 inst/include/Rcpp/macros/xp.h | 2 inst/include/Rcpp/module/CppFunction.h | 30 inst/include/Rcpp/module/Module.h | 90 inst/include/Rcpp/module/Module_Add_Property.h | 42 inst/include/Rcpp/module/Module_Field.h | 38 inst/include/Rcpp/module/Module_Property.h | 146 inst/include/Rcpp/module/Module_generated_Constructor.h | 60 inst/include/Rcpp/module/Module_generated_CppFunction.h | 920 ++-- inst/include/Rcpp/module/Module_generated_CppMethod.h | 1976 ++++----- inst/include/Rcpp/module/Module_generated_Factory.h | 78 inst/include/Rcpp/module/Module_generated_Pointer_CppMethod.h | 2116 +++++----- inst/include/Rcpp/module/Module_generated_Pointer_method.h | 132 inst/include/Rcpp/module/Module_generated_class_constructor.h | 76 inst/include/Rcpp/module/Module_generated_class_factory.h | 76 inst/include/Rcpp/module/Module_generated_ctor_signature.h | 18 inst/include/Rcpp/module/Module_generated_function.h | 266 - 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Title: rmngb Miscellaneous
Description: A collection of miscellaneous functions. Exploratory data analysis, multidimensional visualization, medico-economic simulation, multiple testing...
Author: Antoine Filipovic Pierucci
Maintainer: Antoine Filipovic Pierucci
Diff between rmngb versions 0.3-1 dated 2014-04-26 and 0.4-1 dated 2014-06-08
rmngb-0.3-1/rmngb/man/reverse.Rd |only rmngb-0.4-1/rmngb/DESCRIPTION | 8 ++++---- rmngb-0.4-1/rmngb/MD5 | 12 ++++++++---- rmngb-0.4-1/rmngb/NEWS | 8 ++++++++ rmngb-0.4-1/rmngb/R/listOperations.R |only rmngb-0.4-1/rmngb/R/utils.R | 12 ++++++------ rmngb-0.4-1/rmngb/man/colClasses.Rd |only rmngb-0.4-1/rmngb/man/nDistinct.Rd |only rmngb-0.4-1/rmngb/man/outerList.Rd |only rmngb-0.4-1/rmngb/man/zipLists.Rd |only 10 files changed, 26 insertions(+), 14 deletions(-)
Title: Package for Luminescence Dating data analysis
Description: Package provides a collection of various R functions for Luminescence Dating data analysis.
Author: Sebastian Kreutzer [aut, trl, cre],
Christoph Schmidt [aut],
Margret C. Fuchs [aut],
Michael Dietze [aut],
Manfred Fischer [aut, trl],
Christoph Burow [aut],
Markus Fuchs [ths]
Maintainer: Sebastian Kreutzer
Diff between Luminescence versions 0.3.3 dated 2014-04-14 and 0.3.4 dated 2014-06-08
Luminescence-0.3.3/Luminescence/inst/doc/S4-class_objects.pdf |only Luminescence-0.3.4/Luminescence/DESCRIPTION | 15 Luminescence-0.3.4/Luminescence/MD5 | 73 Luminescence-0.3.4/Luminescence/NEWS | 75 Luminescence-0.3.4/Luminescence/R/analyse_SAR.CWOSL.R | 21 Luminescence-0.3.4/Luminescence/R/apply_CosmicRayRemoval.R | 55 Luminescence-0.3.4/Luminescence/R/calc_CentralDose.R | 540 +- Luminescence-0.3.4/Luminescence/R/calc_FiniteMixture.R | 1855 +++++----- Luminescence-0.3.4/Luminescence/R/plot_AbanicoPlot.R | 43 Luminescence-0.3.4/Luminescence/R/plot_GrowthCurve.R | 107 Luminescence-0.3.4/Luminescence/R/plot_KDE.R | 112 Luminescence-0.3.4/Luminescence/R/plot_RLum.Data.Spectrum.R | 6 Luminescence-0.3.4/Luminescence/R/plot_RadialPlot.R | 15 Luminescence-0.3.4/Luminescence/R/readXSYG2R.R | 14 Luminescence-0.3.4/Luminescence/inst/NEWS.Rd | 87 Luminescence-0.3.4/Luminescence/inst/doc/S4classObjects.pdf |only Luminescence-0.3.4/Luminescence/inst/doc/index.html |only Luminescence-0.3.4/Luminescence/man/BaseDataSet.CosmicDoseRate.Rd | 1 Luminescence-0.3.4/Luminescence/man/ExampleData.BINfileData.Rd | 4 Luminescence-0.3.4/Luminescence/man/ExampleData.CW_OSL_Curve.Rd | 3 Luminescence-0.3.4/Luminescence/man/ExampleData.DeValues.Rd | 8 Luminescence-0.3.4/Luminescence/man/ExampleData.FittingLM.Rd | 8 Luminescence-0.3.4/Luminescence/man/ExampleData.LxTxData.Rd | 6 Luminescence-0.3.4/Luminescence/man/ExampleData.LxTxOSLData.Rd | 6 Luminescence-0.3.4/Luminescence/man/ExampleData.RLum.Analysis.Rd | 7 Luminescence-0.3.4/Luminescence/man/ExampleData.XSYG.Rd | 7 Luminescence-0.3.4/Luminescence/man/Luminescence-package.Rd | 10 Luminescence-0.3.4/Luminescence/man/Risoe.BINfileData-class.Rd | 2 Luminescence-0.3.4/Luminescence/man/analyse_SAR.CWOSL.Rd | 196 - Luminescence-0.3.4/Luminescence/man/analyse_SAR.TL.Rd | 2 Luminescence-0.3.4/Luminescence/man/apply_CosmicRayRemoval.Rd | 10 Luminescence-0.3.4/Luminescence/man/calc_CentralDose.Rd | 2 Luminescence-0.3.4/Luminescence/man/calc_FiniteMixture.Rd | 8 Luminescence-0.3.4/Luminescence/man/plot_AbanicoPlot.Rd | 4 Luminescence-0.3.4/Luminescence/man/plot_GrowthCurve.Rd | 13 Luminescence-0.3.4/Luminescence/man/plot_KDE.Rd | 2 Luminescence-0.3.4/Luminescence/man/plot_RLum.Data.Spectrum.Rd | 2 Luminescence-0.3.4/Luminescence/man/plot_RadialPlot.Rd | 8 Luminescence-0.3.4/Luminescence/man/readXSYG2R.Rd | 2 39 files changed, 1767 insertions(+), 1562 deletions(-)