Previous versions (as known to CRANberries) which should be available via the Archive link are:
2014-09-11 1.0
Title: Generate high-resolution Venn and Euler plots
Diff between VennDiagram versions 1.6.7 dated 2014-07-03 and 1.6.8 dated 2014-09-11
Description: A set of functions to generate high-resolution Venn and Euler plots. Includes handling for several special cases, including two-case scaling, and extensive customization of plot shape and structure.
Author: Hanbo Chen
Maintainer: Paul Boutros
DESCRIPTION | 6 ++--
MD5 | 8 +++---
NAMESPACE | 1
R/draw.pairwise.venn.R | 59 +++++++++++++++++++++++++------------------------
TODO | 1
5 files changed, 40 insertions(+), 35 deletions(-)
Title: International Assessment Data Manager
Diff between intsvy versions 1.3 dated 2014-03-13 and 1.4 dated 2014-09-11
Description: Provides tools for importing, merging, and analysing data from international assessment studies (TIMSS, PIRLS, PISA and PIAAC)
Author: Daniel Caro
Maintainer: Daniel Caro
intsvy-1.3/intsvy/data |only
intsvy-1.3/intsvy/man/file.names.Rd |only
intsvy-1.3/intsvy/man/iea.country.Rd |only
intsvy-1.3/intsvy/man/pisa.country.Rd |only
intsvy-1.4/intsvy/DESCRIPTION | 17
intsvy-1.4/intsvy/MD5 | 164 ++++----
intsvy-1.4/intsvy/NAMESPACE | 83 ++--
intsvy-1.4/intsvy/R/adj.input.R | 22 -
intsvy-1.4/intsvy/R/adj.measlev.R | 12
intsvy-1.4/intsvy/R/is.vlabeled.R | 24 -
intsvy-1.4/intsvy/R/piaac.mean.R |only
intsvy-1.4/intsvy/R/piaac.mean.pv.R |only
intsvy-1.4/intsvy/R/piaac.reg.R |only
intsvy-1.4/intsvy/R/piaac.reg.pv.R |only
intsvy-1.4/intsvy/R/piaac.table.R |only
intsvy-1.4/intsvy/R/pirls.ben.pv.R | 90 ++--
intsvy-1.4/intsvy/R/pirls.mean.R | 52 +-
intsvy-1.4/intsvy/R/pirls.mean.pv.R | 98 ++---
intsvy-1.4/intsvy/R/pirls.reg.R | 92 ++--
intsvy-1.4/intsvy/R/pirls.reg.pv.R | 112 ++---
intsvy-1.4/intsvy/R/pirls.rho.R | 62 +--
intsvy-1.4/intsvy/R/pirls.rho.pv.R | 146 +++----
intsvy-1.4/intsvy/R/pirls.select.merge.R | 486 ++++++++++++-------------
intsvy-1.4/intsvy/R/pirls.table.R | 86 ++--
intsvy-1.4/intsvy/R/pirls.var.label.R | 82 ++--
intsvy-1.4/intsvy/R/pisa.ben.pv.R | 132 +++---
intsvy-1.4/intsvy/R/pisa.mean.R | 64 +--
intsvy-1.4/intsvy/R/pisa.mean.pv.R | 119 ++++--
intsvy-1.4/intsvy/R/pisa.reg.R | 90 ++--
intsvy-1.4/intsvy/R/pisa.reg.pv.R | 123 +++---
intsvy-1.4/intsvy/R/pisa.select.merge.R | 350 +++++++++---------
intsvy-1.4/intsvy/R/pisa.table.R | 98 ++---
intsvy-1.4/intsvy/R/pisa.var.label.R | 94 ++--
intsvy-1.4/intsvy/R/plot.intsvy.mean.R |only
intsvy-1.4/intsvy/R/plot.intsvy.reg.R |only
intsvy-1.4/intsvy/R/plot.intsvy.table.R |only
intsvy-1.4/intsvy/R/sysdata.rda |only
intsvy-1.4/intsvy/R/timss.ben.pv.R | 90 ++--
intsvy-1.4/intsvy/R/timss.mean.R | 52 +-
intsvy-1.4/intsvy/R/timss.mean.pv.R | 99 ++---
intsvy-1.4/intsvy/R/timss.reg.R | 92 ++--
intsvy-1.4/intsvy/R/timss.reg.pv.R | 112 ++---
intsvy-1.4/intsvy/R/timss.rho.R | 62 +--
intsvy-1.4/intsvy/R/timss.rho.pv.R | 146 +++----
intsvy-1.4/intsvy/R/timss.table.R | 86 ++--
intsvy-1.4/intsvy/R/timssg4.select.merge.R | 500 +++++++++++++-------------
intsvy-1.4/intsvy/R/timssg4.var.label.R | 82 ++--
intsvy-1.4/intsvy/R/timssg8.select.merge.R | 398 ++++++++++----------
intsvy-1.4/intsvy/R/timssg8.var.label.R | 80 ++--
intsvy-1.4/intsvy/README.md |only
intsvy-1.4/intsvy/man/adj.input.Rd | 70 +--
intsvy-1.4/intsvy/man/adj.measlev.Rd | 74 +--
intsvy-1.4/intsvy/man/intsvy-package.Rd | 40 +-
intsvy-1.4/intsvy/man/is.vlabeled.Rd | 70 +--
intsvy-1.4/intsvy/man/piaac.mean.Rd |only
intsvy-1.4/intsvy/man/piaac.mean.pv.Rd |only
intsvy-1.4/intsvy/man/piaac.reg.Rd |only
intsvy-1.4/intsvy/man/piaac.reg.pv.Rd |only
intsvy-1.4/intsvy/man/piaac.table.Rd |only
intsvy-1.4/intsvy/man/pirls.ben.pv.Rd | 108 ++---
intsvy-1.4/intsvy/man/pirls.mean.Rd | 100 ++---
intsvy-1.4/intsvy/man/pirls.mean.pv.Rd | 104 ++---
intsvy-1.4/intsvy/man/pirls.reg.Rd | 122 +++---
intsvy-1.4/intsvy/man/pirls.reg.pv.Rd | 112 ++---
intsvy-1.4/intsvy/man/pirls.rho.Rd | 98 ++---
intsvy-1.4/intsvy/man/pirls.rho.pv.Rd | 102 ++---
intsvy-1.4/intsvy/man/pirls.select.merge.Rd | 96 ++--
intsvy-1.4/intsvy/man/pirls.table.Rd | 98 ++---
intsvy-1.4/intsvy/man/pirls.var.label.Rd | 74 +--
intsvy-1.4/intsvy/man/pisa.ben.pv.Rd | 98 ++---
intsvy-1.4/intsvy/man/pisa.mean.Rd | 107 ++---
intsvy-1.4/intsvy/man/pisa.mean.pv.Rd | 112 +++--
intsvy-1.4/intsvy/man/pisa.reg.Rd | 95 ++--
intsvy-1.4/intsvy/man/pisa.reg.pv.Rd | 102 ++---
intsvy-1.4/intsvy/man/pisa.select.merge.Rd | 118 +++---
intsvy-1.4/intsvy/man/pisa.table.Rd | 96 ++--
intsvy-1.4/intsvy/man/pisa.var.label.Rd | 96 ++--
intsvy-1.4/intsvy/man/plot.intsvy.mean.Rd |only
intsvy-1.4/intsvy/man/plot.intsvy.reg.Rd |only
intsvy-1.4/intsvy/man/plot.intsvy.table.Rd |only
intsvy-1.4/intsvy/man/timss.ben.pv.Rd | 112 ++---
intsvy-1.4/intsvy/man/timss.mean.Rd | 106 ++---
intsvy-1.4/intsvy/man/timss.mean.pv.Rd | 106 ++---
intsvy-1.4/intsvy/man/timss.reg.Rd | 100 ++---
intsvy-1.4/intsvy/man/timss.reg.pv.Rd | 106 ++---
intsvy-1.4/intsvy/man/timss.rho.Rd | 98 ++---
intsvy-1.4/intsvy/man/timss.rho.pv.Rd | 102 ++---
intsvy-1.4/intsvy/man/timss.table.Rd | 118 +++---
intsvy-1.4/intsvy/man/timssg4.select.merge.Rd | 100 ++---
intsvy-1.4/intsvy/man/timssg4.var.label.Rd | 70 +--
intsvy-1.4/intsvy/man/timssg8.select.merge.Rd | 96 ++--
intsvy-1.4/intsvy/man/timssg8.var.label.Rd | 72 +--
intsvy-1.4/intsvy/vignettes |only
93 files changed, 3946 insertions(+), 3829 deletions(-)
Title: SNPs enrichment analysis
Diff between snpEnrichment versions 1.4-0 dated 2014-02-04 and 1.4-1 dated 2014-09-11
Description: Implements classes and methods for large scale SNP enrichment analysis (e.g. SNPs associated with genes expression in a GWAS signal)
Author: Mickael Canouil [aut, cre],
Loic Yengo [ctb]
Maintainer: Mickael Canouil
ChangeLog | 21 ++++++++-----
DESCRIPTION | 8 ++---
MD5 | 38 ++++++++++++------------
NAMESPACE | 4 +-
R/Global.R | 52 ++++++++++++++-------------------
R/enrichment.R | 66 +++++++++++++++++++++++++++++++------------
data/toyEnrichment.RData |binary
man/Chromosome-class.Rd | 28 +++++++++---------
man/EnrichSNP-class.Rd | 4 +-
man/Enrichment-class.Rd | 12 +++----
man/compareEnrichment.Rd | 30 +++++++++----------
man/excludeSNP-methods.Rd | 2 -
man/initFiles.Rd | 14 ++++-----
man/mclapply2.Rd | 4 +-
man/plot-methods.Rd | 2 -
man/reSample-methods.Rd | 22 +++++++-------
man/readEnrichment.Rd | 36 +++++++++++------------
man/snpEnrichment-package.Rd | 44 ++++++++++++++--------------
man/transcript-dataset.Rd | 2 -
man/writeLD.Rd | 16 +++++-----
20 files changed, 216 insertions(+), 189 deletions(-)
Title: Independence tests and benchmarks
Diff between knnIndep versions 1.0 dated 2014-03-18 and 2.0 dated 2014-09-11
Description: This package provides the implementation of an exact formula of the
ith nearest neighbour distance distribution and implementations of tests of
independence based on that formula. Furthermore the package provides a
general framework to benchmark tests of independence.
Author: Sebastian Dümcke
Maintainer: Sebastian Dümcke
DESCRIPTION | 10 +++++-----
MD5 | 29 ++++++++++++++++++++---------
NAMESPACE | 3 +++
R/P_ceq.R | 17 ++++++-----------
R/P_cge_aeq.R |only
R/Pc_givena4nn.R |only
R/novelTest.chisq.R | 9 ++++-----
R/novelTest.chisq4nn.R |only
R/novelTest.extreme4nn.R |only
R/optimise.copula.mi.R |only
R/parameters.R | 15 ++++++++++++++-
R/power.plot.R | 6 +++++-
man/P_cge_aeq.Rd |only
man/P_di.Rd |only
man/Pc_givena.Rd | 2 +-
man/Pc_givena4nn.Rd |only
man/generate.paths.Rd |only
man/optimise.copula.mi.Rd |only
man/parameters.Rd |only
man/roc.plot.Rd | 1 -
man/run.tests.Rd | 6 +++++-
21 files changed, 63 insertions(+), 35 deletions(-)
Title: Variable selection for generalized linear mixed models by
L1-penalized estimation
Diff between glmmLasso versions 1.3.2 dated 2014-09-10 and 1.3.3 dated 2014-09-11
Description: Variable selection for generalized linear mixed models by L1-penalized estimation
Author: Andreas Groll
Maintainer: Andreas Groll
DESCRIPTION | 8 ++++----
MD5 | 14 +++++++-------
R/glmmLasso.r | 15 ++++++++++-----
R/glmm_final.r | 6 ++++--
R/glmm_final.smooth.r | 6 ++++--
R/glmm_final_multi_random.r | 6 ++++--
R/glmm_final_multi_random_smooth.r | 6 ++++--
man/glmmLasso.rd | 13 +++++++------
8 files changed, 44 insertions(+), 30 deletions(-)
Title: Create Simple Packages Which Do Not Upset R CMD check
Diff between pkgKitten versions 0.1.1 dated 2014-09-10 and 0.1.2 dated 2014-09-11
Description: Provides a function kitten() which creates cute little
packages which pass R CMD check. This sets it apart from
package.skeleton() which it calls, and which leaves imperfect files
behind. As this is not exactly helpful for beginners, kitten() offers
an alternative.
Author: Dirk Eddelbuettel
Maintainer: Dirk Eddelbuettel
ChangeLog | 6 ++++++
DESCRIPTION | 8 ++++----
MD5 | 8 ++++----
R/pkgKitten.R | 2 +-
inst/NEWS.Rd | 7 +++++++
5 files changed, 22 insertions(+), 9 deletions(-)
Title: Parametric bootstrap and Kenward Roger based methods for mixed
model comparison
Diff between pbkrtest versions 0.4-0 dated 2014-08-11 and 0.4-1 dated 2014-09-11
Description: Test in linear mixed effects models.
Attention is on linear mixed effects models as implemented in the
lme4 package.
The package implements a parametric bootstrap test
The package implements a Kenward-Roger modification of F-tests
Author: Ulrich Halekoh
Maintainer: Søren Højsgaard
pbkrtest-0.4-0/pbkrtest/man/KRinit-modcomp.Rd |only
pbkrtest-0.4-1/pbkrtest/ChangeLog | 64 +-
pbkrtest-0.4-1/pbkrtest/DESCRIPTION | 10
pbkrtest-0.4-1/pbkrtest/MD5 | 41 -
pbkrtest-0.4-1/pbkrtest/NAMESPACE | 14
pbkrtest-0.4-1/pbkrtest/R/KR-vcovAdj.R | 187 ++++---
pbkrtest-0.4-1/pbkrtest/R/get_ddf_Lb.R | 155 +++--
pbkrtest-0.4-1/pbkrtest/build/vignette.rds |binary
pbkrtest-0.4-1/pbkrtest/data/beets.txt.gz |binary
pbkrtest-0.4-1/pbkrtest/data/budworm.txt.gz |binary
pbkrtest-0.4-1/pbkrtest/inst/doc/pbkrtest-introduction.R | 311 +++++-------
pbkrtest-0.4-1/pbkrtest/inst/doc/pbkrtest-introduction.Rnw | 179 ++----
pbkrtest-0.4-1/pbkrtest/inst/doc/pbkrtest-introduction.pdf |binary
pbkrtest-0.4-1/pbkrtest/man/KRmodcomp.Rd | 2
pbkrtest-0.4-1/pbkrtest/man/PBmodcomp.Rd | 2
pbkrtest-0.4-1/pbkrtest/man/PBrefdist.Rd | 2
pbkrtest-0.4-1/pbkrtest/man/getKR.Rd | 2
pbkrtest-0.4-1/pbkrtest/man/get_ddf_Lb.Rd | 58 +-
pbkrtest-0.4-1/pbkrtest/man/model2restrictionMatrix.Rd | 2
pbkrtest-0.4-1/pbkrtest/man/pbkrtest-internal.Rd | 8
pbkrtest-0.4-1/pbkrtest/man/vcovAdj.Rd | 2
pbkrtest-0.4-1/pbkrtest/vignettes/pbkrtest-introduction.Rnw | 179 ++----
22 files changed, 635 insertions(+), 583 deletions(-)
Title: Subgroup Discovery and Analytics
Diff between rsubgroup versions 0.5 dated 2014-08-06 and 0.6 dated 2014-09-11
Description: A collection of efficient and effective tools and
algorithms for subgroup discovery and analytics. The package
integrates an R interface to the org.vikamine.kernel library
of the VIKAMINE system (http://www.vikamine.org) implementing
subgroup discovery, pattern mining and analytics in Java.
Author: Martin Atzmueller
Maintainer: Martin Atzmueller
DESCRIPTION | 12 ++++++------
MD5 | 25 +++++++++++++------------
NEWS |only
R/classes.R | 11 +++++++++--
R/subgroup.R | 9 +++++++--
inst/java/subgroup.jar |binary
man/CreateSDTask.Rd | 2 +-
man/DiscoverSubgroups.Rd | 11 +++++++----
man/DiscoverSubgroupsByTask.Rd | 11 +++++++----
man/Pattern-class.Rd | 2 +-
man/SDTaskConfig-class.Rd | 3 ++-
man/ToDataframe.Rd | 2 +-
man/as.target.Rd | 2 +-
man/subgroup-package.Rd | 7 +++----
14 files changed, 58 insertions(+), 39 deletions(-)
Title: Ranking Responses in a Single Response Question or a Multiple
Response Question
Diff between RankResponse versions 3.0.3 dated 2014-04-03 and 3.1.1 dated 2014-09-11
Description: Methods for ranking responses of a single response question or a multiple response question
Author: Hsiuying Wang, Yu-Chun Lin
Maintainer: Hsiuying Wang
RankResponse-3.0.3/RankResponse/R/rank.LR.R |only
RankResponse-3.0.3/RankResponse/man/rank.LR.Rd |only
RankResponse-3.1.1/RankResponse/DESCRIPTION | 10 +-
RankResponse-3.1.1/RankResponse/MD5 | 32 ++++----
RankResponse-3.1.1/RankResponse/R/rank.L2R.R | 35 +--------
RankResponse-3.1.1/RankResponse/R/rank.LN.R | 54 ++------------
RankResponse-3.1.1/RankResponse/R/rank.btmm.R | 4 -
RankResponse-3.1.1/RankResponse/R/rank.btnr.R | 4 -
RankResponse-3.1.1/RankResponse/R/rank.btqn.R | 4 -
RankResponse-3.1.1/RankResponse/R/rank.gs.R | 72 ++++++++-----------
RankResponse-3.1.1/RankResponse/R/rank.wald.R | 85 ++++++++++-------------
RankResponse-3.1.1/RankResponse/man/rank.L2R.Rd | 4 -
RankResponse-3.1.1/RankResponse/man/rank.LN.Rd | 4 -
RankResponse-3.1.1/RankResponse/man/rank.btmm.Rd | 4 -
RankResponse-3.1.1/RankResponse/man/rank.btnr.Rd | 4 -
RankResponse-3.1.1/RankResponse/man/rank.btqn.Rd | 4 -
RankResponse-3.1.1/RankResponse/man/rank.gs.Rd | 4 -
RankResponse-3.1.1/RankResponse/man/rank.wald.Rd | 4 -
18 files changed, 125 insertions(+), 203 deletions(-)
Title: Read and analyze PLEXOS solutions from R
Diff between rplexos versions 0.9 dated 2014-08-26 and 0.9.1 dated 2014-09-11
Description: Read and analyze PLEXOS solutions from R
Author: Eduardo Ibanez
Maintainer: Eduardo Ibanez
DESCRIPTION | 8 +--
MD5 | 35 +++++++-------
NAMESPACE | 3 -
R/auxiliary.R | 16 ++++++
R/globalVariables.R | 2
R/plexos_open.R | 44 +++++++-----------
R/process_folder.R | 2
R/process_solution.R | 111 ++++++++++++++++++++++++++---------------------
R/query.R | 67 +++++++++++++++++++++++-----
man/list_folders.Rd | 2
man/plexos_close.Rd | 2
man/plexos_open.Rd | 2
man/process_folder.Rd | 6 +-
man/query_config.Rd |only
man/query_master.Rd | 2
man/query_property.Rd | 2
man/rplexos.Rd | 2
man/valid_columns.Rd | 2
src/process_xml.cpp | 117 ++++++++++++++++++++++++++++++++------------------
19 files changed, 261 insertions(+), 164 deletions(-)
More information about rChoiceDialogs at CRAN
Permanent link
Title: Linear mixed effect model splines for modelling and analysis of
time course data
Diff between lmms versions 1.0 dated 2014-06-06 and 1.1 dated 2014-09-11
Description: The package implements linear mixed effect model splines for
modelling and differential expression for highly dimensional data sets:
investNoise for quality control and filterNoise for removing
non-informative trajectories; lmmSpline to model time course expression
profiles and lmmsDE performs differential expression analysis to identify
differential expression between groups, time and/or time x group
interaction.
Author: Jasmin Straube, Kim-Anh Le Cao and Emma Huang with contributions of
Dominique Gorse
Maintainer: Jasmin Straube
DESCRIPTION | 16 +++++++++-------
MD5 | 39 ++++++++++++++++++++++++---------------
NAMESPACE | 9 +++++++++
R/AllClasses.R | 17 +++++++++++++++++
R/filterNoise-method.R |only
R/investNoise-method.R |only
R/lmmSpline-method.R | 4 ++--
R/lmmsDE-method.R | 4 ++--
R/plot.lmmsde-method.R | 26 +++++++++++++-------------
R/plot.lmmspline-method.R | 27 ++++++++++++++-------------
R/plot.noise-method.R |only
R/predict.lmmspline-method.R | 2 +-
R/summary.lmmsde-methods.R | 1 +
R/summary.lmmspline-methods.R | 1 +
R/summary.noise-methods.R |only
man/filterNoise-methods.Rd |only
man/investNoise-methods.Rd |only
man/lmmSpline-methods.Rd | 5 ++---
man/lmms-package.Rd | 3 ++-
man/lmmsDE-methods.Rd | 5 ++---
man/noise-class.Rd |only
man/plot.lmmsde.Rd | 4 ++--
man/plot.noise.Rd |only
man/predict.lmmspline.Rd | 2 +-
man/summary.noise.Rd |only
25 files changed, 102 insertions(+), 63 deletions(-)
Title: file-based access to large matrices stored on HDD in binary
format
Diff between DatABEL versions 0.9-4.1 dated 2014-07-27 and 0.9-5 dated 2014-09-11
Description: a package providing an interface to the C++ FILEVECTOR
library facilitating analysis of large (giga- to tera-bytes) matrices;
matrix storage is organized in a way that either columns or rows are
quickly accessible; primarily aimed to support genome-wide association
analyses e.g. using GenABEL, MixABEL and ProbABEL
Author: Yurii Aulchenko, Stepan Yakovenko, Erik Roos, Marcel Kempenaar, Maksim
Struchalin
Maintainer: Yurii Aulchenko
DatABEL-0.9-4.1/DatABEL/CHANGES.LOG |only
DatABEL-0.9-4.1/DatABEL/src/Rstaff.h |only
DatABEL-0.9-5/DatABEL/ChangeLog |only
DatABEL-0.9-5/DatABEL/DESCRIPTION | 22
DatABEL-0.9-5/DatABEL/MD5 | 119 -
DatABEL-0.9-5/DatABEL/NAMESPACE | 81 -
DatABEL-0.9-5/DatABEL/R/DatABEL-package.R | 32
DatABEL-0.9-5/DatABEL/R/apply2dfo.R | 406 +++--
DatABEL-0.9-5/DatABEL/R/apply2dfo_util.R | 129 +
DatABEL-0.9-5/DatABEL/R/checkPackageVersionOnCRAN.R | 130 +
DatABEL-0.9-5/DatABEL/R/databel.R | 16
DatABEL-0.9-5/DatABEL/R/databel2matrix.R | 1
DatABEL-0.9-5/DatABEL/R/databel2text.R | 13
DatABEL-0.9-5/DatABEL/R/databel_class.R | 1033 ++++++++-------
DatABEL-0.9-5/DatABEL/R/databel_class_internal.R | 127 -
DatABEL-0.9-5/DatABEL/R/extract_text_file_columns.R | 39
DatABEL-0.9-5/DatABEL/R/get_temporary_file_name.R | 40
DatABEL-0.9-5/DatABEL/R/make_empty_fvf.R | 55
DatABEL-0.9-5/DatABEL/R/matrix2databel.R | 49
DatABEL-0.9-5/DatABEL/R/text2databel.R | 273 ++--
DatABEL-0.9-5/DatABEL/R/zzz.R | 12
DatABEL-0.9-5/DatABEL/build |only
DatABEL-0.9-5/DatABEL/inst/doc/intro_DatABEL.R |only
DatABEL-0.9-5/DatABEL/inst/doc/intro_DatABEL.pdf |binary
DatABEL-0.9-5/DatABEL/man/DatABEL-package.Rd | 29
DatABEL-0.9-5/DatABEL/man/apply2dfo.Rd | 100 -
DatABEL-0.9-5/DatABEL/man/checkPackageVersionOnCRAN.Rd |only
DatABEL-0.9-5/DatABEL/man/databel-class.Rd | 212 +--
DatABEL-0.9-5/DatABEL/man/databel.Rd | 16
DatABEL-0.9-5/DatABEL/man/databel2matrix.Rd | 20
DatABEL-0.9-5/DatABEL/man/databel2text.Rd | 21
DatABEL-0.9-5/DatABEL/man/extract_text_file_columns.Rd | 15
DatABEL-0.9-5/DatABEL/man/get_temporary_file_name.Rd | 13
DatABEL-0.9-5/DatABEL/man/make_empty_fvf.Rd | 28
DatABEL-0.9-5/DatABEL/man/matrix2databel.Rd | 31
DatABEL-0.9-5/DatABEL/man/process_lm_output.Rd | 25
DatABEL-0.9-5/DatABEL/man/text2databel.Rd | 185 +-
DatABEL-0.9-5/DatABEL/src/AbstractMatrix.cpp | 12
DatABEL-0.9-5/DatABEL/src/AbstractMatrix.h | 113 -
DatABEL-0.9-5/DatABEL/src/AbstractMatrix_R.cpp | 13
DatABEL-0.9-5/DatABEL/src/CastUtils.cpp | 294 ++--
DatABEL-0.9-5/DatABEL/src/CastUtils.h | 144 +-
DatABEL-0.9-5/DatABEL/src/FileVector.cpp | 1159 +++++++++--------
DatABEL-0.9-5/DatABEL/src/FileVector.h | 219 +--
DatABEL-0.9-5/DatABEL/src/FilteredMatrix.cpp | 117 +
DatABEL-0.9-5/DatABEL/src/FilteredMatrix.h | 173 +-
DatABEL-0.9-5/DatABEL/src/FilteredMatrix_R.cpp | 10
DatABEL-0.9-5/DatABEL/src/Logger.cpp | 7
DatABEL-0.9-5/DatABEL/src/Logger.h | 30
DatABEL-0.9-5/DatABEL/src/RealHandlerWrapper.cpp | 21
DatABEL-0.9-5/DatABEL/src/RealHandlerWrapper.h | 10
DatABEL-0.9-5/DatABEL/src/ReusableFileHandle.cpp | 31
DatABEL-0.9-5/DatABEL/src/ReusableFileHandle.h | 28
DatABEL-0.9-5/DatABEL/src/Rstuff.h |only
DatABEL-0.9-5/DatABEL/src/Transposer.cpp | 239 ++-
DatABEL-0.9-5/DatABEL/src/Transposer.h | 50
DatABEL-0.9-5/DatABEL/src/convert_util.cpp | 567 ++++----
DatABEL-0.9-5/DatABEL/src/convert_util.h | 10
DatABEL-0.9-5/DatABEL/src/dautil.cpp | 2
DatABEL-0.9-5/DatABEL/src/dautil.h | 2
DatABEL-0.9-5/DatABEL/src/frutil.cpp | 243 +--
DatABEL-0.9-5/DatABEL/src/frutil.h | 88 -
DatABEL-0.9-5/DatABEL/src/iterator.cpp | 4
DatABEL-0.9-5/DatABEL/src/iterator_functions.cpp | 2
64 files changed, 3742 insertions(+), 3118 deletions(-)