Title: Multiple Comparisons and Simultaneous Confidence Intervals
Diff between nparcomp versions 2.0 dated 2012-11-06 and 2.5 dated 2014-11-12
Description: With this package, it is possible to compute nonparametric simultaneous confidence intervals for relative contrast effects in the unbalanced one way layout. Moreover, it computes simultaneous p-values. The simultaneous confidence intervals can be computed using multivariate normal distribution, multivariate t-distribution with a Satterthwaite Approximation of the degree of freedom or using multivariate range preserving transformations with Logit or Probit as transformation function. 2 sample comparisons can be performed with the same methods described above. There is no assumption on the underlying distribution function, only that the data have to be at least ordinal numbers.
Author: Frank Konietschke
Maintainer: Frank Konietschke
DESCRIPTION | 25 -
MD5 | 27 -
NAMESPACE | 5
R/mctp.R | 826 +++++++++++++++++++----------------------
R/mctp.rm.R | 27 -
R/npar.t.test.paired.r |only
R/nparcomp.R | 3
R/plot.nparttestpaired.r |only
R/summary.nparttestpaired.r |only
data/PGI.rda |only
inst |only
man/PGI.rd |only
man/gao.Rd | 2
man/gao_cs.Rd | 2
man/mctp.Rd | 2
man/npar.t.test.Rd | 1
man/npar.t.test.paired.rd |only
man/plot.nparttestpaired.rd |only
man/summary.nparttestpaired.rd |only
19 files changed, 448 insertions(+), 472 deletions(-)
Title: R Interface for lp_solve version 5.5.2.0
Diff between lpSolveAPI versions 5.5.2.0-13 dated 2014-11-10 and 5.5.2.0-14 dated 2014-11-12
Description: The lpSolveAPI package provides an R interface for lp_solve,
a Mixed Integer Linear Programming (MILP) solver with support for pure
linear, (mixed) integer/binary, semi-continuous and special ordered sets
(SOS) models.
Author: lp_solve
Maintainer: Kjell Konis
DESCRIPTION | 12 ++++++------
MD5 | 16 +++++++++-------
inst/include/myblas.h |only
src/lp_solve/Makefile | 3 ++-
src/lp_solve/lp_LUSOL.c | 6 ++----
src/lp_solve/lp_lib.c | 25 ++++++++++++++++---------
src/lp_solve/lp_price.c | 2 +-
src/lp_solve/lusol.c | 6 ++----
src/lp_solve/lusol1.c | 37 +++++++++++++++----------------------
src/lp_solve/myblas.c |only
10 files changed, 53 insertions(+), 54 deletions(-)
Title: Seasonal Adjustment by Frequency Analysis
Diff between descomponer versions 1.0 dated 2014-09-01 and 1.1 dated 2014-11-12
Description: Decompose a time series into seasonal, trend and irregular components using transformations to amplitude-frequency domain.
Author: Francisco Parra
Maintainer: Francisco Parra
DESCRIPTION | 8 -
MD5 | 19 +++-
NAMESPACE | 1
R/descomponer.R | 217 +++++++++++++++++++++++++++++-----------------------
R/gdescomponer.R |only
build |only
data |only
inst |only
man/descomponer.rd | 17 ++--
man/gdescomponer.rd |only
man/ipi.rd |only
vignettes |only
12 files changed, 153 insertions(+), 109 deletions(-)
Title: Semiparametric Bivariate Probit Modelling
Diff between SemiParBIVProbit versions 3.2-12 dated 2014-10-17 and 3.2-12.1 dated 2014-11-12
More information about SemiParBIVProbit at CRAN
Description: Routine for fitting bivariate probit models with semiparametric predictors (including linear and nonlinear effects) in the presence of correlated error equations, endogeneity, sample selection or partial observability. Bivariate copula models are also supported.
Author: Giampiero Marra
Maintainer: Giampiero Marra
ChangeLog | 4
DESCRIPTION | 8 -
MD5 | 20 +-
R/LM.bpm.r | 2
R/SemiParBIVProbit.r | 6
R/bprobgHs.r | 71 +++------
R/copgHs.r | 386 +++++++++++++++++++++++++++++++++++++++++++++++++--
R/est.prev.r | 5
R/print.AT.r | 2
R/working.comp.r | 37 +---
man/LM.bpm.Rd | 4
11 files changed, 443 insertions(+), 102 deletions(-)
Permanent link
Title: Interactive Interpretation of Linear Regression Models
Diff between LinRegInteractive versions 0.2-2 dated 2014-09-08 and 0.3-0 dated 2014-11-12
More information about LinRegInteractive at CRAN
Description: Interactive visualization of effects, response functions
and marginal effects for different kinds of regression models. In this version
linear regression models, generalized linear models, generalized additive
models and linear mixed-effects models are supported.
Major features are the interactive approach and the handling of the effects of categorical covariates:
if two or more factors are used as covariates every combination of the levels of each
factor is treated separately. The automatic calculation of
marginal effects and a number of possibilities to customize the graphical output
are useful features as well.
Author: Martin Meermeyer
Maintainer: Martin Meermeyer
LinRegInteractive-0.2-2/LinRegInteractive/man/factor.combinations.Rd |only
LinRegInteractive-0.2-2/LinRegInteractive/man/glm.interactive.Rd |only
LinRegInteractive-0.2-2/LinRegInteractive/man/lm.interactive.Rd |only
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LinRegInteractive-0.2-2/LinRegInteractive/vignettes/mr-income-resp-001.pdf |only
LinRegInteractive-0.3-0/LinRegInteractive/DESCRIPTION | 30
LinRegInteractive-0.3-0/LinRegInteractive/MD5 | 78
LinRegInteractive-0.3-0/LinRegInteractive/NAMESPACE | 13
LinRegInteractive-0.3-0/LinRegInteractive/R/LinRegInteractive_functions.R | 2451 ++++++----
LinRegInteractive-0.3-0/LinRegInteractive/build/vignette.rds |binary
LinRegInteractive-0.3-0/LinRegInteractive/demo/VignetteFigures.R | 118
LinRegInteractive-0.3-0/LinRegInteractive/inst/CITATION | 16
LinRegInteractive-0.3-0/LinRegInteractive/inst/doc/LinRegInteractive.R | 256 -
LinRegInteractive-0.3-0/LinRegInteractive/inst/doc/LinRegInteractive.Rnw | 655 +-
LinRegInteractive-0.3-0/LinRegInteractive/inst/doc/LinRegInteractive.pdf |binary
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LinRegInteractive-0.3-0/LinRegInteractive/vignettes/LinRegInteractive.Rnw | 655 +-
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LinRegInteractive-0.3-0/LinRegInteractive/vignettes/LinRegInteractive.tex | 673 +-
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LinRegInteractive-0.3-0/LinRegInteractive/vignettes/fig-002-1.png |binary
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LinRegInteractive-0.3-0/LinRegInteractive/vignettes/vignettegraphics.zip |binary
63 files changed, 2728 insertions(+), 2236 deletions(-)
Permanent link
Title: R-MongoDB driver
Diff between rmongodb versions 1.6.5 dated 2014-03-06 and 1.8.0 dated 2014-11-12
Description: This R package provides an interface to the NoSQL MongoDB database
using the MongoDB C-driver version 0.8.
Author: MongoDB, Inc. (mongo-c-driver) & Markus Schmidberger (mongosoup.de).
Formerly Gerald Lindsly.
Maintainer: Dmitriy Selivanov
rmongodb-1.6.5/rmongodb/src/libbson |only
rmongodb-1.6.5/rmongodb/src/libj2bson |only
rmongodb-1.6.5/rmongodb/src/libmongoc |only
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rmongodb-1.6.5/rmongodb/tests/test_bson_from_JSON.R |only
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rmongodb-1.6.5/rmongodb/vignettes/rmongodb_cheat_sheet.synctex.gz |only
rmongodb-1.8.0/rmongodb/DESCRIPTION | 10
rmongodb-1.8.0/rmongodb/MD5 | 442
rmongodb-1.8.0/rmongodb/NAMESPACE | 5
rmongodb-1.8.0/rmongodb/NEWS | 24
rmongodb-1.8.0/rmongodb/R/bson_convert.R | 213
rmongodb-1.8.0/rmongodb/R/mongo.R | 8
rmongodb-1.8.0/rmongodb/R/mongo_cursor.R | 158
rmongodb-1.8.0/rmongodb/R/mongo_find.R | 297
rmongodb-1.8.0/rmongodb/R/mongo_high_level.R | 101
rmongodb-1.8.0/rmongodb/R/mongo_index.R | 115
rmongodb-1.8.0/rmongodb/R/rmongodb-package.R | 6
rmongodb-1.8.0/rmongodb/R/rmongodb_imports.R |only
rmongodb-1.8.0/rmongodb/R/utils.R |only
rmongodb-1.8.0/rmongodb/R/zzz.R | 17
rmongodb-1.8.0/rmongodb/README.md | 17
rmongodb-1.8.0/rmongodb/build/vignette.rds |binary
rmongodb-1.8.0/rmongodb/inst/doc/rmongodb_advanced.R | 8
rmongodb-1.8.0/rmongodb/inst/doc/rmongodb_advanced.html | 394
rmongodb-1.8.0/rmongodb/inst/doc/rmongodb_cheat_sheet.Rnw | 4
rmongodb-1.8.0/rmongodb/inst/doc/rmongodb_cheat_sheet.pdf |binary
rmongodb-1.8.0/rmongodb/inst/doc/rmongodb_introduction.R | 93
rmongodb-1.8.0/rmongodb/inst/doc/rmongodb_introduction.Rmd | 99
rmongodb-1.8.0/rmongodb/inst/doc/rmongodb_introduction.html | 568
rmongodb-1.8.0/rmongodb/man/as.character.mongo.oid.Rd | 23
rmongodb-1.8.0/rmongodb/man/mongo.Rd | 24
rmongodb-1.8.0/rmongodb/man/mongo.add.user.Rd | 19
rmongodb-1.8.0/rmongodb/man/mongo.aggregation.Rd | 41
rmongodb-1.8.0/rmongodb/man/mongo.authenticate.Rd | 24
rmongodb-1.8.0/rmongodb/man/mongo.binary.binary.Rd | 4
rmongodb-1.8.0/rmongodb/man/mongo.binary.function.Rd | 4
rmongodb-1.8.0/rmongodb/man/mongo.binary.md5.Rd | 4
rmongodb-1.8.0/rmongodb/man/mongo.binary.old.Rd | 7
rmongodb-1.8.0/rmongodb/man/mongo.binary.user.Rd | 4
rmongodb-1.8.0/rmongodb/man/mongo.binary.uuid.Rd | 4
rmongodb-1.8.0/rmongodb/man/mongo.bson.Rd | 35
rmongodb-1.8.0/rmongodb/man/mongo.bson.array.Rd | 11
rmongodb-1.8.0/rmongodb/man/mongo.bson.binary.Rd | 10
rmongodb-1.8.0/rmongodb/man/mongo.bson.bool.Rd | 10
rmongodb-1.8.0/rmongodb/man/mongo.bson.buffer.Rd | 26
rmongodb-1.8.0/rmongodb/man/mongo.bson.buffer.append.Rd | 38
rmongodb-1.8.0/rmongodb/man/mongo.bson.buffer.append.bool.Rd | 38
rmongodb-1.8.0/rmongodb/man/mongo.bson.buffer.append.bson.Rd | 24
rmongodb-1.8.0/rmongodb/man/mongo.bson.buffer.append.code.Rd | 25
rmongodb-1.8.0/rmongodb/man/mongo.bson.buffer.append.code.w.scope.Rd | 23
rmongodb-1.8.0/rmongodb/man/mongo.bson.buffer.append.complex.Rd | 43
rmongodb-1.8.0/rmongodb/man/mongo.bson.buffer.append.double.Rd | 37
rmongodb-1.8.0/rmongodb/man/mongo.bson.buffer.append.element.Rd | 27
rmongodb-1.8.0/rmongodb/man/mongo.bson.buffer.append.int.Rd | 42
rmongodb-1.8.0/rmongodb/man/mongo.bson.buffer.append.list.Rd | 22
rmongodb-1.8.0/rmongodb/man/mongo.bson.buffer.append.long.Rd | 56
rmongodb-1.8.0/rmongodb/man/mongo.bson.buffer.append.null.Rd | 11
rmongodb-1.8.0/rmongodb/man/mongo.bson.buffer.append.object.Rd | 66
rmongodb-1.8.0/rmongodb/man/mongo.bson.buffer.append.oid.Rd | 19
rmongodb-1.8.0/rmongodb/man/mongo.bson.buffer.append.raw.Rd | 52
rmongodb-1.8.0/rmongodb/man/mongo.bson.buffer.append.regex.Rd | 22
rmongodb-1.8.0/rmongodb/man/mongo.bson.buffer.append.string.Rd | 37
rmongodb-1.8.0/rmongodb/man/mongo.bson.buffer.append.symbol.Rd | 26
rmongodb-1.8.0/rmongodb/man/mongo.bson.buffer.append.time.Rd | 43
rmongodb-1.8.0/rmongodb/man/mongo.bson.buffer.append.timestamp.Rd | 23
rmongodb-1.8.0/rmongodb/man/mongo.bson.buffer.append.undefined.Rd | 19
rmongodb-1.8.0/rmongodb/man/mongo.bson.buffer.create.Rd | 8
rmongodb-1.8.0/rmongodb/man/mongo.bson.buffer.finish.object.Rd | 18
rmongodb-1.8.0/rmongodb/man/mongo.bson.buffer.size.Rd | 17
rmongodb-1.8.0/rmongodb/man/mongo.bson.buffer.start.array.Rd | 33
rmongodb-1.8.0/rmongodb/man/mongo.bson.buffer.start.object.Rd | 27
rmongodb-1.8.0/rmongodb/man/mongo.bson.code.Rd | 9
rmongodb-1.8.0/rmongodb/man/mongo.bson.code.w.scope.Rd | 10
rmongodb-1.8.0/rmongodb/man/mongo.bson.date.Rd | 9
rmongodb-1.8.0/rmongodb/man/mongo.bson.dbref.Rd | 21
rmongodb-1.8.0/rmongodb/man/mongo.bson.destroy.Rd | 13
rmongodb-1.8.0/rmongodb/man/mongo.bson.double.Rd | 9
rmongodb-1.8.0/rmongodb/man/mongo.bson.empty.Rd | 8
rmongodb-1.8.0/rmongodb/man/mongo.bson.eoo.Rd | 10
rmongodb-1.8.0/rmongodb/man/mongo.bson.find.Rd | 23
rmongodb-1.8.0/rmongodb/man/mongo.bson.from.JSON.Rd | 13
rmongodb-1.8.0/rmongodb/man/mongo.bson.from.buffer.Rd | 20
rmongodb-1.8.0/rmongodb/man/mongo.bson.from.df.Rd |only
rmongodb-1.8.0/rmongodb/man/mongo.bson.from.list.Rd | 32
rmongodb-1.8.0/rmongodb/man/mongo.bson.int.Rd | 9
rmongodb-1.8.0/rmongodb/man/mongo.bson.iterator.Rd | 19
rmongodb-1.8.0/rmongodb/man/mongo.bson.iterator.create.Rd | 30
rmongodb-1.8.0/rmongodb/man/mongo.bson.iterator.key.Rd | 12
rmongodb-1.8.0/rmongodb/man/mongo.bson.iterator.next.Rd | 32
rmongodb-1.8.0/rmongodb/man/mongo.bson.iterator.type.Rd | 30
rmongodb-1.8.0/rmongodb/man/mongo.bson.iterator.value.Rd | 84
rmongodb-1.8.0/rmongodb/man/mongo.bson.long.Rd | 10
rmongodb-1.8.0/rmongodb/man/mongo.bson.null.Rd | 9
rmongodb-1.8.0/rmongodb/man/mongo.bson.object.Rd | 9
rmongodb-1.8.0/rmongodb/man/mongo.bson.oid.Rd | 9
rmongodb-1.8.0/rmongodb/man/mongo.bson.print.Rd | 10
rmongodb-1.8.0/rmongodb/man/mongo.bson.regex.Rd | 9
rmongodb-1.8.0/rmongodb/man/mongo.bson.size.Rd | 12
rmongodb-1.8.0/rmongodb/man/mongo.bson.string.Rd | 9
rmongodb-1.8.0/rmongodb/man/mongo.bson.symbol.Rd | 9
rmongodb-1.8.0/rmongodb/man/mongo.bson.timestamp.Rd | 9
rmongodb-1.8.0/rmongodb/man/mongo.bson.to.Robject.Rd | 75
rmongodb-1.8.0/rmongodb/man/mongo.bson.to.list.Rd | 38
rmongodb-1.8.0/rmongodb/man/mongo.bson.undefined.Rd | 9
rmongodb-1.8.0/rmongodb/man/mongo.bson.value.Rd | 93
rmongodb-1.8.0/rmongodb/man/mongo.code.Rd | 24
rmongodb-1.8.0/rmongodb/man/mongo.code.create.Rd | 17
rmongodb-1.8.0/rmongodb/man/mongo.code.w.scope.Rd | 30
rmongodb-1.8.0/rmongodb/man/mongo.code.w.scope.create.Rd | 18
rmongodb-1.8.0/rmongodb/man/mongo.command.Rd | 44
rmongodb-1.8.0/rmongodb/man/mongo.count.Rd | 39
rmongodb-1.8.0/rmongodb/man/mongo.create.Rd | 83
rmongodb-1.8.0/rmongodb/man/mongo.cursor.Rd | 31
rmongodb-1.8.0/rmongodb/man/mongo.cursor.destroy.Rd | 34
rmongodb-1.8.0/rmongodb/man/mongo.cursor.next.Rd | 15
rmongodb-1.8.0/rmongodb/man/mongo.cursor.to.data.frame.Rd | 22
rmongodb-1.8.0/rmongodb/man/mongo.cursor.to.list.Rd | 28
rmongodb-1.8.0/rmongodb/man/mongo.cursor.value.Rd | 13
rmongodb-1.8.0/rmongodb/man/mongo.destroy.Rd | 23
rmongodb-1.8.0/rmongodb/man/mongo.disconnect.Rd | 13
rmongodb-1.8.0/rmongodb/man/mongo.distinct.Rd | 19
rmongodb-1.8.0/rmongodb/man/mongo.drop.Rd | 13
rmongodb-1.8.0/rmongodb/man/mongo.drop.database.Rd | 15
rmongodb-1.8.0/rmongodb/man/mongo.find.Rd | 132
rmongodb-1.8.0/rmongodb/man/mongo.find.all.Rd | 133
rmongodb-1.8.0/rmongodb/man/mongo.find.await.data.Rd | 1
rmongodb-1.8.0/rmongodb/man/mongo.find.cursor.tailable.Rd | 1
rmongodb-1.8.0/rmongodb/man/mongo.find.exhaust.Rd | 1
rmongodb-1.8.0/rmongodb/man/mongo.find.no.cursor.timeout.Rd | 4
rmongodb-1.8.0/rmongodb/man/mongo.find.one.Rd | 82
rmongodb-1.8.0/rmongodb/man/mongo.find.oplog.replay.Rd | 1
rmongodb-1.8.0/rmongodb/man/mongo.find.partial.results.Rd | 1
rmongodb-1.8.0/rmongodb/man/mongo.find.slave.ok.Rd | 1
rmongodb-1.8.0/rmongodb/man/mongo.get.database.collections.Rd | 26
rmongodb-1.8.0/rmongodb/man/mongo.get.databases.Rd | 10
rmongodb-1.8.0/rmongodb/man/mongo.get.err.Rd | 38
rmongodb-1.8.0/rmongodb/man/mongo.get.hosts.Rd | 11
rmongodb-1.8.0/rmongodb/man/mongo.get.last.err.Rd | 28
rmongodb-1.8.0/rmongodb/man/mongo.get.prev.err.Rd | 26
rmongodb-1.8.0/rmongodb/man/mongo.get.primary.Rd | 6
rmongodb-1.8.0/rmongodb/man/mongo.get.server.err.Rd | 21
rmongodb-1.8.0/rmongodb/man/mongo.get.server.err.string.Rd | 21
rmongodb-1.8.0/rmongodb/man/mongo.get.socket.Rd | 7
rmongodb-1.8.0/rmongodb/man/mongo.get.timeout.Rd | 10
rmongodb-1.8.0/rmongodb/man/mongo.gridfile.Rd | 27
rmongodb-1.8.0/rmongodb/man/mongo.gridfile.destroy.Rd | 17
rmongodb-1.8.0/rmongodb/man/mongo.gridfile.get.chunk.Rd | 29
rmongodb-1.8.0/rmongodb/man/mongo.gridfile.get.chunk.count.Rd | 17
rmongodb-1.8.0/rmongodb/man/mongo.gridfile.get.chunk.size.Rd | 17
rmongodb-1.8.0/rmongodb/man/mongo.gridfile.get.chunks.Rd | 37
rmongodb-1.8.0/rmongodb/man/mongo.gridfile.get.content.type.Rd | 17
rmongodb-1.8.0/rmongodb/man/mongo.gridfile.get.descriptor.Rd | 22
rmongodb-1.8.0/rmongodb/man/mongo.gridfile.get.filename.Rd | 16
rmongodb-1.8.0/rmongodb/man/mongo.gridfile.get.length.Rd | 12
rmongodb-1.8.0/rmongodb/man/mongo.gridfile.get.md5.Rd | 12
rmongodb-1.8.0/rmongodb/man/mongo.gridfile.get.metadata.Rd | 26
rmongodb-1.8.0/rmongodb/man/mongo.gridfile.get.upload.date.Rd | 12
rmongodb-1.8.0/rmongodb/man/mongo.gridfile.pipe.Rd | 21
rmongodb-1.8.0/rmongodb/man/mongo.gridfile.read.Rd | 38
rmongodb-1.8.0/rmongodb/man/mongo.gridfile.seek.Rd | 23
rmongodb-1.8.0/rmongodb/man/mongo.gridfile.writer.Rd | 28
rmongodb-1.8.0/rmongodb/man/mongo.gridfile.writer.create.Rd | 26
rmongodb-1.8.0/rmongodb/man/mongo.gridfile.writer.finish.Rd | 10
rmongodb-1.8.0/rmongodb/man/mongo.gridfile.writer.write.Rd | 22
rmongodb-1.8.0/rmongodb/man/mongo.gridfs.Rd | 32
rmongodb-1.8.0/rmongodb/man/mongo.gridfs.create.Rd | 29
rmongodb-1.8.0/rmongodb/man/mongo.gridfs.destroy.Rd | 14
rmongodb-1.8.0/rmongodb/man/mongo.gridfs.find.Rd | 27
rmongodb-1.8.0/rmongodb/man/mongo.gridfs.remove.file.Rd | 10
rmongodb-1.8.0/rmongodb/man/mongo.gridfs.store.Rd | 29
rmongodb-1.8.0/rmongodb/man/mongo.gridfs.store.file.Rd | 25
rmongodb-1.8.0/rmongodb/man/mongo.index.TTLcreate.Rd |only
rmongodb-1.8.0/rmongodb/man/mongo.index.background.Rd | 4
rmongodb-1.8.0/rmongodb/man/mongo.index.create.Rd | 61
rmongodb-1.8.0/rmongodb/man/mongo.index.drop.dups.Rd | 4
rmongodb-1.8.0/rmongodb/man/mongo.index.sparse.Rd | 1
rmongodb-1.8.0/rmongodb/man/mongo.index.unique.Rd | 5
rmongodb-1.8.0/rmongodb/man/mongo.insert.Rd | 30
rmongodb-1.8.0/rmongodb/man/mongo.insert.batch.Rd | 30
rmongodb-1.8.0/rmongodb/man/mongo.is.connected.Rd | 11
rmongodb-1.8.0/rmongodb/man/mongo.is.master.Rd | 14
rmongodb-1.8.0/rmongodb/man/mongo.oid.Rd | 27
rmongodb-1.8.0/rmongodb/man/mongo.oid.create.Rd | 23
rmongodb-1.8.0/rmongodb/man/mongo.oid.from.string.Rd | 18
rmongodb-1.8.0/rmongodb/man/mongo.oid.print.Rd | 12
rmongodb-1.8.0/rmongodb/man/mongo.oid.time.Rd | 10
rmongodb-1.8.0/rmongodb/man/mongo.oid.to.string.Rd | 17
rmongodb-1.8.0/rmongodb/man/mongo.reconnect.Rd | 11
rmongodb-1.8.0/rmongodb/man/mongo.regex.Rd | 22
rmongodb-1.8.0/rmongodb/man/mongo.regex.create.Rd | 24
rmongodb-1.8.0/rmongodb/man/mongo.remove.Rd | 35
rmongodb-1.8.0/rmongodb/man/mongo.rename.Rd | 19
rmongodb-1.8.0/rmongodb/man/mongo.reset.err.Rd | 16
rmongodb-1.8.0/rmongodb/man/mongo.set.timeout.Rd | 17
rmongodb-1.8.0/rmongodb/man/mongo.shorthand.Rd | 13
rmongodb-1.8.0/rmongodb/man/mongo.simple.command.Rd | 40
rmongodb-1.8.0/rmongodb/man/mongo.symbol.Rd | 25
rmongodb-1.8.0/rmongodb/man/mongo.symbol.create.Rd | 19
rmongodb-1.8.0/rmongodb/man/mongo.timestamp.Rd | 27
rmongodb-1.8.0/rmongodb/man/mongo.timestamp.create.Rd | 25
rmongodb-1.8.0/rmongodb/man/mongo.undefined.Rd | 25
rmongodb-1.8.0/rmongodb/man/mongo.undefined.create.Rd | 15
rmongodb-1.8.0/rmongodb/man/mongo.update.Rd | 59
rmongodb-1.8.0/rmongodb/man/mongo.update.basic.Rd | 7
rmongodb-1.8.0/rmongodb/man/mongo.update.multi.Rd | 8
rmongodb-1.8.0/rmongodb/man/mongo.update.upsert.Rd | 8
rmongodb-1.8.0/rmongodb/man/print.mongo.bson.Rd | 13
rmongodb-1.8.0/rmongodb/man/print.mongo.oid.Rd | 18
rmongodb-1.8.0/rmongodb/man/zips.Rd | 10
rmongodb-1.8.0/rmongodb/src/Makevars | 2
rmongodb-1.8.0/rmongodb/src/Makevars.win | 2
rmongodb-1.8.0/rmongodb/src/api_bson.c | 216
rmongodb-1.8.0/rmongodb/src/api_bson.h | 1
rmongodb-1.8.0/rmongodb/src/api_convert.c |only
rmongodb-1.8.0/rmongodb/src/api_gridfs.c | 2
rmongodb-1.8.0/rmongodb/src/api_mongo.c | 50
rmongodb-1.8.0/rmongodb/src/helpers.c |only
rmongodb-1.8.0/rmongodb/src/helpers.h |only
rmongodb-1.8.0/rmongodb/src/libmongo/bson.c | 50
rmongodb-1.8.0/rmongodb/src/libmongo/bson.h | 36
rmongodb-1.8.0/rmongodb/src/libmongo/gridfs.c | 158
rmongodb-1.8.0/rmongodb/src/libmongo/mongo.c | 154
rmongodb-1.8.0/rmongodb/src/utility.c | 4
rmongodb-1.8.0/rmongodb/tests/test_bson_from.R |only
rmongodb-1.8.0/rmongodb/tests/test_find.R | 11
rmongodb-1.8.0/rmongodb/vignettes/faust.txt |14860 +++++-----
rmongodb-1.8.0/rmongodb/vignettes/rmongodb_cheat_sheet.Rnw | 4
rmongodb-1.8.0/rmongodb/vignettes/rmongodb_introduction.Rmd | 99
229 files changed, 11398 insertions(+), 10939 deletions(-)
Title: Wrapper functions for GUESS
Diff between R2GUESS versions 1.5 dated 2014-10-17 and 1.6 dated 2014-11-12
Description: Wrapper functions for GUESS, a GPU-enabled sparse Bayesian variable
selection method for linear regression based analysis of possibly
multivariate/correlated outcomes.
Author: Gianluca Campanella [cre],
Benoit Liquet [aut],
Marc Chadeau-Hyam [aut],
Leonardo Bottolo [ctb],
Sylvia Richardson [ctb]
Maintainer: Gianluca Campanella
DESCRIPTION | 8 ++++----
MD5 | 6 +++---
R/R2GUESS.R | 8 ++++----
R/R2GUESS.perm.R | 8 ++++----
4 files changed, 15 insertions(+), 15 deletions(-)
Title: Multi-locus stepwise regression (MSR)
Diff between HapEstXXR versions 0.1-6 dated 2013-07-24 and 0.1-7 dated 2014-11-12
Description: Multi-locus marker analysis
Author: Sven Knueppel and Klaus Rohde
Maintainer: Sven Knueppel
DESCRIPTION | 8
MD5 | 119 +++----
NAMESPACE | 74 ++--
R/allele1to2.R | 36 +-
R/allele1toR.R | 30 +
R/allele2to1.R | 66 ++--
R/allele2toR.R | 62 ++-
R/alleleRto2.R | 42 +-
R/catt.R | 56 +--
R/coding.baseline.allele.R | 72 ++--
R/dec2bin.R | 79 ++--
R/hapest.caco.R | 126 +++----
R/hapest.gaussian.R |only
R/itegeppXXR.R | 193 +++++------
R/maf.R | 73 ++--
R/makeHaploviewInputFile.R | 43 +-
R/makePlinkInputFile.R | 130 ++++---
R/msr.R | 323 +++++++++++--------
R/msr.binomial.forward.adjusted.R | 450 ++++++++++++++++-----------
R/msr.binomial.forward.unadjusted.R | 453 ++++++++++++++++-----------
R/msr.binomial.haplotype.test.adjusted.R | 113 +++---
R/msr.binomial.haplotype.test.unadjusted.R | 108 ++----
R/msr.families.unadjusted.R | 445 ++++++++++++++-------------
R/msr.gaussian.forward.adjusted.R | 475 +++++++++++++++++------------
R/msr.gaussian.forward.unadjusted.R | 453 ++++++++++++++++-----------
R/msr.gaussian.haplotype.test.adjusted.R | 119 +++----
R/msr.gaussian.haplotype.test.unadjusted.R | 114 +++---
R/multi.snp.test.R | 75 ++--
R/order.families.R | 103 +++---
R/powerset.R | 50 +--
R/read.data.R | 170 +++++-----
R/single.haplotype.test.R | 198 +++++-------
R/single.haplotype.test.binomial.R | 194 +++++------
R/single.haplotype.test.families.R | 304 ++++++++----------
R/single.haplotype.test.gaussian.R | 178 ++++------
R/single.snp.test.R | 164 +++++-----
R/single.snp.test.binomial.R | 126 ++++---
R/single.snp.test.casecohort.R | 51 +--
R/single.snp.test.casecohort.prentice.R | 329 +++++++++-----------
R/single.snp.test.families.R | 3
R/single.snp.test.gaussian.R | 111 +++---
R/zzz.r | 18 -
man/allele1to2.Rd | 43 +-
man/catt.Rd | 10
man/dec2bin.Rd | 4
man/itegeppXXR.Rd | 8
man/maf.Rd | 8
man/makeHaploviewInputFile.Rd | 6
man/makePlinkInputFile.Rd | 6
man/msr.Rd | 33 +-
man/multi.snp.test.Rd | 4
man/order.families.Rd | 22 -
man/powerset.Rd | 2
man/read.data.Rd | 2
man/read.haploview.Rd | 6
man/single.haplotype.test.Rd | 10
man/single.snp.test.Rd | 27 -
src/HapRshort.c | 33 +-
src/haptdpnZR.c | 87 +++--
src/itegeppXXR.c | 46 +-
src/rng.c | 21 -
61 files changed, 3601 insertions(+), 3113 deletions(-)
Title: Tools for Making, Displaying and Spoiling Sudoku Games
Diff between sudokuAlt versions 0.1-2 dated 2014-11-08 and 0.1-3 dated 2014-11-12
Description: Tools for making, retrieving, displaying and solving sudoku games.
This package is an alternative to the earlier sudoku-solver package,
'sudoku'. The present package uses a slightly different algorithm, has a
simpler coding and presents a few more sugar tools, such as plot and print
methods. Solved sudoku games are of some interest in Experimental Design
as examples of Latin Square designs with additional balance constraints.
Author: Bill Venables
Maintainer: Bill Venables
DESCRIPTION | 15 ++++++++-------
MD5 | 11 ++++++-----
NAMESPACE | 1 +
R/sudokuAlt.R | 35 ++++++++++++++++++++++++++++-------
man/as.sudoku.sudoku.Rd |only
man/fetchUKGame.Rd | 16 ++++++++++------
man/makeGame.Rd | 6 ++++++
7 files changed, 59 insertions(+), 25 deletions(-)
Title: 3D visualization device system (OpenGL)
Diff between rgl versions 0.95.1157 dated 2014-10-28 and 0.95.1158 dated 2014-11-12
Description: Provides medium to high level functions for 3D interactive graphics, including
functions modelled on base graphics (plot3d(), etc.) as well as functions for
constructing representations of geometric objects (cube3d(), etc.). Output
may be on screen using OpenGL, or to various standard 3D file formats including
WebGL, PLY, OBJ, STL as well as 2D image formats, including PNG, Postscript, SVG, PGF.
Author: Daniel Adler
Maintainer: Duncan Murdoch
DESCRIPTION | 10 +++++-----
MD5 | 10 +++++-----
inst/NEWS | 4 ++++
src/pixmap.cpp | 8 +++++++-
src/pixmap.h | 4 ++--
src/rglview.cpp | 25 ++++++++++++-------------
6 files changed, 35 insertions(+), 26 deletions(-)
Title: Large, Sparse Optimal Matching with Refined Covariate Balance
Diff between rcbalance versions 1.0 dated 2014-09-02 and 1.2 dated 2014-11-12
Description: Tools for large, sparse optimal matching of treated units
and control units in observational studies. Provisions are
made for refined covariate balance constraints, which include
fine and near-fine balance as special cases. Matches are
optimal in the sense that they are computed as solutions to
network optimization problems rather than greedy algorithms.
Author: Samuel D. Pimentel
Maintainer: Samuel D. Pimentel
DESCRIPTION | 10 +++++-----
MD5 | 12 ++++++------
R/build.dist.struct.R | 44 ++++++++++++++++++++++++++++++++++++++++++--
R/rcbalance.R | 15 +++++++++++----
man/build.dist.struct.Rd | 8 ++++----
man/rcbalance-package.Rd | 6 +++---
man/rcbalance.Rd | 10 ++++++++--
7 files changed, 79 insertions(+), 26 deletions(-)
Title: Dynamic slicing
Diff between dslice versions 1.0.2 dated 2014-07-04 and 1.1.0 dated 2014-11-12
Description: Dynamic slicing is a method designed for dependency detection between a categorical variable and a continuous variable. It could be applied for non-parametric hypothesis testing and gene set enrichment analysis.
Author: Chao Ye and Bo Jiang
Maintainer: Chao Ye
dslice-1.0.2/dslice/man/dslice_eqp_k.Rd |only
dslice-1.0.2/dslice/man/dslice_k.Rd |only
dslice-1.1.0/dslice/DESCRIPTION | 6 ++---
dslice-1.1.0/dslice/MD5 | 26 ++++++++++-----------
dslice-1.1.0/dslice/R/RcppExports.R | 22 +++++++++---------
dslice-1.1.0/dslice/R/ds_gsa.R | 2 -
dslice-1.1.0/dslice/R/slice_show.R | 5 ++--
dslice-1.1.0/dslice/man/ds_eqp_k.Rd | 17 +++++++++-----
dslice-1.1.0/dslice/man/ds_gsa.Rd | 38 ++++++++++++++++----------------
dslice-1.1.0/dslice/man/ds_k.Rd | 14 ++++++-----
dslice-1.1.0/dslice/man/export_res.Rd | 10 +++++---
dslice-1.1.0/dslice/man/load_cls.Rd | 6 +++--
dslice-1.1.0/dslice/man/load_gct.Rd | 6 +++--
dslice-1.1.0/dslice/man/load_gmt.Rd | 6 +++--
dslice-1.1.0/dslice/man/slice_show.Rd | 9 +++++--
15 files changed, 93 insertions(+), 74 deletions(-)
Title: Remove Weekends and Holidays From ggplot2 Axes
Diff between bdscale versions 1.1 dated 2014-10-27 and 1.2 dated 2014-11-12
Description: Provides a continuous date scale, omitting weekends and holidays.
Author: Dave Mills
Maintainer: Dave Mills
DESCRIPTION | 11 +++++-----
MD5 | 19 +++++++++++-------
R/scale_bd.R | 23 +++++++++++++++-------
R/yahoo_dates.R | 2 -
build |only
exec/example_scale_bd.R | 12 +++--------
inst |only
man/bd2t.Rd | 7 +++++-
man/scale_x_bd.Rd | 49 +++---------------------------------------------
man/yahoo.Rd | 2 -
vignettes |only
11 files changed, 50 insertions(+), 75 deletions(-)