Fri, 09 Jan 2015

Package waveslim updated to version 1.7.5 with previous version 1.7.3 dated 2013-12-23

Title: Basic wavelet routines for one-, two- and three-dimensional signal processing
Description: Basic wavelet routines for time series (1D), image (2D) and array (3D) analysis. The code provided here is based on wavelet methodology developed in Percival and Walden (2000); Gencay, Selcuk and Whitcher (2001); the dual-tree complex wavelet transform (DTCWT) from Kingsbury (1999, 2001) as implemented by Selesnick; and Hilbert wavelet pairs (Selesnick 2001, 2002). All figures in chapters 4-7 of GSW (2001) are reproducible using this package and R code available at the book website(s) below.
Author: Brandon Whitcher
Maintainer: Brandon Whitcher

Diff between waveslim versions 1.7.3 dated 2013-12-23 and 1.7.5 dated 2015-01-09

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Package stringdist updated to version 0.9.0 with previous version 0.8.2 dated 2014-12-15

Title: Approximate String Matching and String Distance Functions
Description: Implements an approximate string matching version of R's native 'match' function. Can calculate various string distances based on edits (damerau-levenshtein, hamming, levenshtein, optimal sting alignment), qgrams (q-gram, cosine, jaccard distance) or heuristic metrics (jaro, jaro-winkler). An implementation of soundex is provided as well.
Author: Mark van der Loo [aut, cre], Jan van der Laan [ctb], R Core Team [ctb], Nick Logan [ctb]
Maintainer: Mark van der Loo

Diff between stringdist versions 0.8.2 dated 2014-12-15 and 0.9.0 dated 2015-01-09

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New package RFmarkerDetector with initial version 1.0
Package: RFmarkerDetector
Type: Package
Title: Multivariate Analysis of Metabolomics Data using Random Forests
Version: 1.0
Date: 2014-11-24
Author: Piergiorgio Palla, Giuliano Armano
Maintainer: Piergiorgio Palla
Description: A collection of tools for multivariate analysis of metabolomics data, which includes several preprocessing methods (normalization, scaling) and various exploration and data visualization techniques (Principal Components Analysis and Multi Dimensional Scaling). The core of the package is the Random Forest algorithm used for the construction, optimization and validation of classification models with the aim of identifying potentially relevant biomarkers.
License: GPL-3
LazyData: true
Imports: randomForest, ggplot2, UsingR, WilcoxCV, ROCR
Depends: AUCRF
Packaged: 2015-01-09 14:23:32 UTC; Pg
NeedsCompilation: no
Repository: CRAN
Date/Publication: 2015-01-10 04:15:07

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Package Rfacebook updated to version 0.5 with previous version 0.4 dated 2014-04-02

Title: Access to Facebook API via R
Description: Provides an interface to the Facebook API
Author: Pablo Barbera , Michael Piccirilli
Maintainer: Pablo Barbera

Diff between Rfacebook versions 0.4 dated 2014-04-02 and 0.5 dated 2015-01-09

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Package quantreg updated to version 5.08 with previous version 5.05 dated 2013-09-23

Title: Quantile Regression
Description: Quantile regression and related methods.
Author: Roger Koenker with contributions from Stephen Portnoy, Pin Ng, Achim Zeileis, Philip Grosjean and Brian Ripley
Maintainer: Roger Koenker

Diff between quantreg versions 5.05 dated 2013-09-23 and 5.08 dated 2015-01-09

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Package MNM updated to version 1.0-1 with previous version 1.0-0 dated 2011-07-18

Title: Multivariate Nonparametric Methods. An Approach Based on Spatial Signs and Ranks
Description: The package provides multivariate tests, estimates and methods based on the identity score, spatial sign score and spatial rank score. The methods include one and c-sample problems, shape estimation and testing, linear regression and principal components.
Author: Klaus Nordhausen, Jyrki Mottonen, Hannu Oja
Maintainer: Klaus Nordhausen

Diff between MNM versions 1.0-0 dated 2011-07-18 and 1.0-1 dated 2015-01-09

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Package textometry updated to version 0.1.4 with previous version 0.1.3 dated 2014-06-16

Title: Textual Data Analysis Package used by the TXM Software
Description: Statistical exploration of textual corpora using several methods from French 'Textometrie' (new name of 'Lexicometrie') and French 'Data Analysis' schools. It includes methods for exploring irregularity of distribution of lexicon features across text sets or parts of texts (Specificity analysis); multi-dimensional exploration (Factorial analysis), etc. Those methods are used in the TXM software.
Author: Sylvain Loiseau, Lise Vaudor, Matthieu Decorde, Serge Heiden
Maintainer: Matthieu Decorde

Diff between textometry versions 0.1.3 dated 2014-06-16 and 0.1.4 dated 2015-01-09

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New package RBPcurve with initial version 1.0-20
Package: RBPcurve
Type: Package
Title: The Residual-based Predictiveness Curve
Version: 1.0-20
Date: 2015-01-09
Author: Giuseppe Casalicchio, Bernd Bischl
URL: https://github.com/giuseppec/RBPcurve
BugReports: https://github.com/giuseppec/RBPcurve/issues
Maintainer: Giuseppe Casalicchio
Description: The package provides a visual tool, the RBP curve, to assess the performance of prediction models.
License: GPL-3
Depends: mlr
Imports: BBmisc, checkmate, shape, TeachingDemos
Suggests: testthat, mlbench, mboost
Packaged: 2015-01-09 10:17:33 UTC; Admin2
NeedsCompilation: no
Repository: CRAN
Date/Publication: 2015-01-09 21:57:51

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Package randomLCA updated to version 1.0-2 with previous version 1.0-1 dated 2014-11-17

Title: Random Effects Latent Class Analysis
Description: Fits random effects latent class models, as well as standard latent class models.
Author: Ken Beath
Maintainer: Ken Beath

Diff between randomLCA versions 1.0-1 dated 2014-11-17 and 1.0-2 dated 2015-01-09

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Package LPStimeSeries updated to version 1.0-4 with previous version 1.0-3 dated 2014-07-31

Title: Learned Pattern Similarity and Representation for Time Series
Description: Learned Pattern Similarity (LPS) for time series. This package is based on the 'randomForest' package by Andy Liaw. LPS aims at finding time series patterns to compute the similarity.
Author: Learned Pattern Similarity (LPS) for time series by Mustafa Gokce Baydogan, Ensemble of regression trees by Andy Liaw and Matthew Wiener.
Maintainer: Mustafa Gokce Baydogan

Diff between LPStimeSeries versions 1.0-3 dated 2014-07-31 and 1.0-4 dated 2015-01-09

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Package R2jags updated to version 0.05-01 with previous version 0.04-03 dated 2014-06-19

Title: A Package for Running jags from R
Description: Using this package to call jags from R.
Author: Yu-Sung Su , Masanao Yajima ,
Maintainer: Yu-Sung Su

Diff between R2jags versions 0.04-03 dated 2014-06-19 and 0.05-01 dated 2015-01-09

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Package HSAUR2 updated to version 1.1-13 with previous version 1.1-12 dated 2015-01-05

Title: A Handbook of Statistical Analyses Using R (2nd Edition)
Description: Functions, data sets, analyses and examples from the second edition of the book `A Handbook of Statistical Analyses Using R' (Brian S. Everitt and Torsten Hothorn, Chapman & Hall/CRC, 2008). The first chapter of the book, which is entitled `An Introduction to R', is completely included in this package, for all other chapters, a vignette containing all data analyses is available. In addition, the package contains Sweave code for producing slides for selected chapters (see HSAUR2/inst/slides).
Author: Brian S. Everitt and Torsten Hothorn
Maintainer: Torsten Hothorn

Diff between HSAUR2 versions 1.1-12 dated 2015-01-05 and 1.1-13 dated 2015-01-09

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Package HSAUR updated to version 1.3-6 with previous version 1.3-5 dated 2015-01-05

Title: A Handbook of Statistical Analyses Using R (1st Edition)
Description: Functions, data sets, analyses and examples from the book `A Handbook of Statistical Analyses Using R' (Brian S. Everitt and Torsten Hothorn, Chapman & Hall/CRC, 2006). The first chapter of the book, which is entitled `An Introduction to R', is completely included in this package, for all other chapters, a vignette containing all data analyses is available.
Author: Brian S. Everitt and Torsten Hothorn
Maintainer: Torsten Hothorn

Diff between HSAUR versions 1.3-5 dated 2015-01-05 and 1.3-6 dated 2015-01-09

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Package clickstream updated to version 1.1.3 with previous version 1.1.2 dated 2014-07-15

Title: Analyzes Clickstreams based on Markov Chains
Description: A set of tools to read, analyze and write lists of click sequences on websites (i.e. clickstream). A click can be represented by a number, character or string. Clickstreams can be modeled as zero- (only computes occurrence probabilities), first- or higher-order Markov chains.
Author: Michael Scholz
Maintainer: Michael Scholz

Diff between clickstream versions 1.1.2 dated 2014-07-15 and 1.1.3 dated 2015-01-09

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New package DiagrammeR with initial version 0.1
Package: DiagrammeR
Type: Package
Title: Create diagrams and flowcharts using R.
Version: 0.1
Date: 2015-01-06
Author: Richard Iannone
Maintainer: Richard Iannone
Description: Create diagrams and flowcharts using R.
License: MIT + file LICENSE
Imports: htmlwidgets (>= 0.3.2)
Suggests: knitr
VignetteBuilder: knitr
Packaged: 2015-01-09 05:36:30 UTC; riannone
NeedsCompilation: no
Repository: CRAN
Date/Publication: 2015-01-09 10:02:34

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Package randomizationInference updated to version 1.0.3 with previous version 1.0.2 dated 2014-09-20

Title: Flexible Randomization-Based Inference
Description: Allows the user to conduct randomization-based inference for a wide variety of experimental scenarios. The package leverages a potential outcomes framework to output randomization-based p-values and null intervals for test statistics geared toward any estimands of interest, according to the specified null and alternative hypotheses. Users can define custom randomization schemes so that the randomization distributions are accurate for their experimental settings. The package also creates visualizations of randomization distributions and can test multiple test statistics simultaneously.
Author: Joseph J. Lee and Tirthankar Dasgupta
Maintainer: Joseph J. Lee

Diff between randomizationInference versions 1.0.2 dated 2014-09-20 and 1.0.3 dated 2015-01-09

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Package pvar updated to version 2.2 with previous version 2.1 dated 2014-12-23

Title: Calculation and Application of p-variation
Description: The calculation of p-variation of the finite sample data
Author: Vygantas Butkus
Maintainer: Vygantas Butkus

Diff between pvar versions 2.1 dated 2014-12-23 and 2.2 dated 2015-01-09

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Package LSD updated to version 3.0 with previous version 2.5 dated 2011-11-03

Title: Lots of Superior Depictions
Description: Create lots of colorful plots in a plethora of variations (try the LSD demotour() )
Author: Bjoern Schwalb, Achim Tresch, Phillipp Torkler, Sebastian Duemcke, Carina Demel
Maintainer: Bjoern Schwalb

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Package RefManageR updated to version 0.8.45 with previous version 0.8.40 dated 2014-10-29

Title: Straightforward BibTeX and BibLaTeX Bibliography Management
Description: RefManageR provides tools for importing and working with bibliographic references. It greatly enhances the bibentry class by providing a class BibEntry which stores BibTeX and BibLaTeX references, supports UTF-8 encoding, and can be easily searched by any field, by date ranges, and by various formats for name lists (author by last names, translator by full names, etc.). Entries can be updated, combined, sorted, printed in a number of styles, and exported. BibTeX and BibLaTeX .bib files can be read into R and converted to BibEntry objects. Interfaces to NCBI's Entrez, CrossRef, and Zotero are provided for importing references and references can be created from locally stored PDFs using Poppler. Includes functions for citing and generating a bibliography with hyperlinks for documents prepared with RMarkdown or RHTML.
Author: Mathew W. McLean [aut, cre]
Maintainer: Mathew W. McLean

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Package RcppProgress updated to version 0.2.1 with previous version 0.2 dated 2015-01-07

Title: An Interruptible Progress Bar with OpenMP Support for C++ in R Packages
Description: This package allows to display a progress bar in the R console for long running computations taking place in c++ code, and support for interrupting those computations even in multithreaded code, typically using OpenMP.
Author: Karl Forner
Maintainer: Karl Forner

Diff between RcppProgress versions 0.2 dated 2015-01-07 and 0.2.1 dated 2015-01-09

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Package RcmdrPlugin.HH updated to version 1.1-42 with previous version 1.1-40 dated 2013-10-11

Title: Rcmdr support for the HH package
Description: Rcmdr menu support for many of the functions in the HH package. The focus is on menu items for functions we use in our introductory courses.
Author: Richard M. Heiberger, with contributions from Burt Holland
Maintainer: Richard M. Heiberger

Diff between RcmdrPlugin.HH versions 1.1-40 dated 2013-10-11 and 1.1-42 dated 2015-01-09

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Package HH updated to version 3.1-14 with previous version 3.1-8 dated 2014-12-16

Title: Statistical Analysis and Data Display: Heiberger and Holland
Description: Support software for Statistical Analysis and Data Display (First Edition, Springer, ISBN 0-387-40270-5, 2004) and (Second Edition, Springer, ISBN 978-1-4939-2121-8, anticipated 2015) by Richard M. Heiberger and Burt Holland. This contemporary presentation of statistical methods features extensive use of graphical displays for exploring data and for displaying the analysis. The second edition includes redesigned graphics and additional chapters. The authors emphasize how to construct and interpret graphs, discuss principles of graphical design, and show how accompanying traditional tabular results are used to confirm the visual impressions derived directly from the graphs. Many of the graphical formats are novel and appear here for the first time in print. All chapters have exercises. All functions introduced in the book are in the package. R code for all examples, both graphs and tables, in the book is included in the scripts directory of the package.
Author: Richard M. Heiberger
Maintainer: Richard M. Heiberger

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Package FastRCS updated to version 0.0.6 with previous version 0.0.5 dated 2014-11-13

Title: FastRCS Robust Fit of Multivariable Linear Regression Model
Description: The FastRCS algorithm of Vakili and Schmitt (2014) for robust fit of the multivariable linear regression model and outliers detection.
Author: Kaveh Vakili [aut, cre]
Maintainer: Kaveh Vakili

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Package BayesGESM updated to version 1.2 with previous version 1.1 dated 2014-12-10

Title: Bayesian Analysis of Generalized Elliptical Semiparametric Models and Flexible Measurement Error Models.
Description: This package allows to perform the statistical inference based on the Bayesian approach for regression models under the assumption that independent additive errors follow normal, Student-t, slash, contaminated normal, Laplace or symmetric hyperbolic distributions, i.e., additive errors follow a scale mixtures of normal distributions. The regression models considered in this package are: (i) Generalized elliptical semiparametric models, where both location and dispersion parameters of the response variable distribution include nonparametric additive components described by using B-splines; and (ii) Flexible measurement error models, which admit explanatory variables with and without measurement additive errors as well as the presence of a nonparametric component approximated by using B-splines.
Author: Luz Marina Rondon and Heleno Bolfarine
Maintainer: Luz Marina Rondon

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New package blockTools with initial version 0.6-2
Package: blockTools
Type: Package
Title: Block, Assign, and Diagnose Potential Interference in Randomized Experiments
Version: 0.6-2
Date: 2015-01-08
Author: Ryan T. Moore and Keith Schnakenberg
Maintainer: Ryan T. Moore
Imports: MASS
Suggests: nbpMatching, RItools, xtable
Description: Blocks units into experimental blocks, with one unit per treatment condition, by creating a measure of multivariate distance between all possible pairs of units. Maximum, minimum, or an allowable range of differences between units on one variable can be set. Randomly assign units to treatment conditions. Diagnose potential interference between units assigned to different treatment conditions. Write outputs to .tex and .csv files.
License: GPL (>= 2) | file LICENSE
Packaged: 2015-01-08 23:44:44 UTC; rtm
NeedsCompilation: yes
Repository: CRAN
Date/Publication: 2015-01-09 06:24:26

More information about blockTools at CRAN
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