Mon, 26 Jan 2015

Package stsm updated to version 1.7 with previous version 1.4 dated 2014-07-27

Title: Structural Time Series Models
Description: Fit the basic structural time series model by maximum likelihood.
Author: Javier López-de-Lacalle
Maintainer: Javier López-de-Lacalle

Diff between stsm versions 1.4 dated 2014-07-27 and 1.7 dated 2015-01-26

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Package micromap updated to version 1.9.1 with previous version 1.9 dated 2014-05-27

Title: Linked Micromap Plots
Description: This group of functions simplifies the creation of linked micromap plots.
Author: Quinn Payton [aut], Tony Olsen [aut], Marc Weber [ctb], Michael McManus [ctb], Tom Kincaid [cre, ctb]
Maintainer: Tom Kincaid

Diff between micromap versions 1.9 dated 2014-05-27 and 1.9.1 dated 2015-01-26

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Package dygraphs updated to version 0.4.1 with previous version 0.3.3 dated 2014-12-23

Title: Interface to Dygraphs Interactive Time Series Charting Library
Description: An R interface to the dygraphs JavaScript charting library (a copy of which is included in the package). Provides rich facilities for charting time-series data in R, including highly configurable series- and axis-display and interactive features like zoom/pan and series/point highlighting.
Author: Dan Vanderkam [aut, cph] (dygraphs library in htmlwidgets/lib, http://dygraphs.com/), JJ Allaire [aut, cre] (R interface), RStudio [cph]
Maintainer: JJ Allaire

Diff between dygraphs versions 0.3.3 dated 2014-12-23 and 0.4.1 dated 2015-01-26

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Package simPop updated to version 0.2.9 with previous version 0.2.6 dated 2014-11-18

Title: Simulation of Synthetic Populations for Survey Data Considering Auxiliary Information
Description: Simulate populations for surveys based on auxiliary data including model-based methods, calibration and combinatorial optimization tools. Developed with support of the International Household Survey Network, DFID Trust Fund TF011722
Author: Bernhard Meindl, Matthias Templ, Andreas Alfons, Alexander Kowarik, and with contributions from Mathieu Ribatet
Maintainer: Matthias Templ

Diff between simPop versions 0.2.6 dated 2014-11-18 and 0.2.9 dated 2015-01-26

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Package rmarkdown updated to version 0.5.1 with previous version 0.4.2 dated 2014-12-22

Title: Dynamic Documents for R
Description: Convert R Markdown documents into a variety of formats including HTML, MS Word, PDF, and Beamer.
Author: JJ Allaire [aut, cre], Joe Cheng [aut], Yihui Xie [aut], Jonathan McPherson [aut], Winston Chang [aut], Jeff Allen [aut], Hadley Wickham [aut], Rob Hyndman [aut], RStudio, Inc. [cph], jQuery Foundation [cph] (jQuery library), jQuery contributors [ctb, cph] (jQuery library; authors listed in inst/rmd/h/jquery-AUTHORS.txt), Mark Otto [ctb] (Bootstrap library), Jacob Thornton [ctb] (Bootstrap library), Bootstrap contributors [ctb] (Bootstrap library), Twitter, Inc [cph] (Bootstrap library), Alexander Farkas [ctb, cph] (html5shiv library), Scott Jehl [ctb, cph] (Respond.js library), Ivan Sagalaev [ctb, cph] (highlight.js library), John MacFarlane [ctb, cph] (Pandoc templates), Google, Inc. [ctb, cph] (ioslides library), Dave Raggett [ctb] (slidy library), W3C [cph] (slidy library)
Maintainer: JJ Allaire

Diff between rmarkdown versions 0.4.2 dated 2014-12-22 and 0.5.1 dated 2015-01-26

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New package mountainplot with initial version 1.0
Package: mountainplot
Version: 1.0
Date: 2015-01-25
Title: Mountain Plots, Folded Empirical Cumulative Distribution Plots
Author: Kevin Wright
Maintainer: Kevin Wright
License: GPL-2
LazyData: yes
Description: Lattice functions for drawing folded empirical cumulative distribution plots, or mountain plots. A mountain plot is similar to an empirical CDF plot, except that the curve increases from 0 to 0.5, then decreases from 0.5 to 1 using an inverted scale at the right side. See: Monti (1995), Folded empirical distribution function curves-mountain plots. The American Statistician, 49, 342-345.
URL: https://github.com/kwstat/mountainplot
BugReports: https://github.com/kwstat/mountainplot/issues
VignetteBuilder: knitr
Imports: lattice
Suggests: knitr,latticeExtra
Packaged: 2015-01-26 12:43:32 UTC; wrightkevi
NeedsCompilation: no
Repository: CRAN
Date/Publication: 2015-01-26 20:36:16

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Package metaRNASeq updated to version 1.0.2 with previous version 0.4 dated 2014-03-14

Title: Meta-analysis of RNA-seq data
Description: Implementation of two p-value combination techniques (inverse normal and Fisher methods). A vignette is provided to explain how to perform a meta-analysis from two independent RNA-seq experiments.
Author: Guillemette Marot, Florence Jaffrezic, Andrea Rau
Maintainer: Guillemette Marot

Diff between metaRNASeq versions 0.4 dated 2014-03-14 and 1.0.2 dated 2015-01-26

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Package metaMA updated to version 3.1.1 with previous version 2.1 dated 2011-08-29

Title: Meta-analysis for MicroArrays
Description: Combines either p-values or modified effect sizes from different studies to find differentially expressed genes
Author: Guillemette Marot
Maintainer: Guillemette Marot

Diff between metaMA versions 2.1 dated 2011-08-29 and 3.1.1 dated 2015-01-26

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Package BayesVarSel updated to version 1.6.1 with previous version 1.5.1 dated 2014-03-25

Title: Bayes Factors, Model Choice And Variable Selection In Linear Models
Description: Conceived to calculate Bayes factors in linear models and then to provide a formal Bayesian answer to testing and variable selection problems. From a theoretical side, the emphasis in the package is placed on the prior distributions and BayesVarSel allows using a wide range of them: Jeffreys-Zellner-Siow (Jeffreys, 1961; Zellner and Siow, 1980,1984) Zellner (1986); Fernandez et al. (2001), Liang et al. (2008) and Bayarri et al. (2012). The interaction with the package is through a friendly interface that syntactically mimics the well-known lm command of R. The resulting objects can be easily explored providing the user very valuable information (like marginal, joint and conditional inclusion probabilities of potential variables; the highest posterior probability model, HPM; the median probability model, MPM) about the structure of the true -data generating- model. Additionally, BayesVarSel incorporates abilities to handle problems with a large number of potential explanatory variables through parallel and heuristic versions (Garcia-Donato and Martinez-Beneito 2013) of the main commands.
Author: Gonzalo Garcia-Donato and Anabel Forte
Maintainer: Anabel Forte

Diff between BayesVarSel versions 1.5.1 dated 2014-03-25 and 1.6.1 dated 2015-01-26

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New package SocialPosition with initial version 1.0
Package: SocialPosition
Type: Package
Title: Social Position Indicators Construction Toolbox
Version: 1.0
Date: 2015-01-25
Author: Julie Falcon (Berlin Social Science Center - WZB)
Maintainer: Julie Falcon
Description: Provides to sociologists (and related scientists) a toolbox to facilitate the construction of social position indicators from survey data. Social position indicators refer to what is commonly known as social class and social status. There exists in the sociological literature many theoretical conceptualisation and empirical operationalisation of social class and social status. This first version of the package offers tools to construct the International Socio-Economic Index of Occupational Status (ISEI) and the Oesch social class schema. It also provides tools to convert several occupational classifications (PCS82, PCS03, and ISCO08) into a common one (ISCO88) to facilitate data harmonisation work, and tools to collapse (i.e. group) modalities of social position indicators.
License: GPL-2 | GPL-3
Packaged: 2015-01-26 07:54:38 UTC; juliefalcon
NeedsCompilation: no
Repository: CRAN
Date/Publication: 2015-01-26 12:17:26

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New package sae2 with initial version 0.1-1
Package: sae2
Type: Package
Title: Small Area Estimation: Time-series Models
Version: 0.1-1
Date: 2015-01-26
Author: Robert E. Fay, Mamadou Diallo
Maintainer: Robert Fay
Depends: R (>= 2.14.0), MASS
Suggests: sae
Description: Time series models for small area estimation based on area-level models.
License: GPL-2
Packaged: 2015-01-26 11:09:39 UTC; Bob
NeedsCompilation: no
Repository: CRAN
Date/Publication: 2015-01-26 12:23:20

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Package R2BayesX updated to version 1.0-0 with previous version 0.3-1 dated 2013-08-19

Title: Estimate Structured Additive Regression Models with BayesX
Description: An R interface to estimate structured additive regression (STAR) models with BayesX.
Author: Nikolaus Umlauf [aut, cre], Thomas Kneib [aut], Stefan Lang [aut], Achim Zeileis [aut]
Maintainer: Nikolaus Umlauf

Diff between R2BayesX versions 0.3-1 dated 2013-08-19 and 1.0-0 dated 2015-01-26

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 42 files changed, 302 insertions(+), 223 deletions(-)

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Package Disake updated to version 1.5 with previous version 1.0 dated 2014-01-20

Title: Discrete associated kernel estimators
Description: Discrete smoothing of probability mass function is performed using three discrete associated kernels: Dirac Discrete Uniform (DiracDU), Binomial and Discrete Triangular. Two automatic bandwidth selection procedures are implemented: the cross-validation method for the three kernels and the local Bayesian approach for Binomial kernel. Note that DiracDU is used for categorical data, Binomial kernel is appropriate for count data with small or moderate sample sizes, and Discrete Triangular kernel is recommended for count data with large sample sizes.
Author: W. E. Wansouwé, C. C. Kokonendji and D. T. Kolyang
Maintainer: W. E. Wansouwé

Diff between Disake versions 1.0 dated 2014-01-20 and 1.5 dated 2015-01-26

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 20 files changed, 90 insertions(+), 44 deletions(-)

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Package RISmed updated to version 2.1.4 with previous version 2.1.2 dated 2014-01-26

Title: Download content from NCBI databases
Description: Download content from NCBI databases. This package is intended to facilitate analyses of NCBI database content. This package is not intended for reference management.
Author: Stephanie Kovalchik
Maintainer: S. A. Kovalchik

Diff between RISmed versions 2.1.2 dated 2014-01-26 and 2.1.4 dated 2015-01-26

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New package RDota with initial version 1.1
Package: RDota
Type: Package
Title: Data Analysis Toolbox for Dota2
Version: 1.1
Depends: R(>= 3.1.2)
Date: 2015-01-15
Author: Xiao Lei
Maintainer: Xiao Lei
Description: Data analysis functions for Dota2. Dota2 is a popular online game (see, e.g. for more information) and there are more and more websites doing data analysis for paid players.The current version has only two functions, showing unconditional win rates and calculating the best choice of hero based on given lineup.
License: GPL-3
LazyData: yes
Encoding: UTF-8
Packaged: 2015-01-25 10:08:30 UTC; Administrator
NeedsCompilation: no
Repository: CRAN
Date/Publication: 2015-01-26 07:07:30

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Package ltsk updated to version 1.0.3 with previous version 1.0.2 dated 2015-01-22

Title: Local Time Space Kriging
Description: Implements local spatial and local spatiotemporal Kriging based on local spatial and local spatiotemporal variograms, respectively.
Author: Naresh Kumar, Dong Liang, Jin Chen, Jun Chen
Maintainer: Dong Liang

Diff between ltsk versions 1.0.2 dated 2015-01-22 and 1.0.3 dated 2015-01-26

 DESCRIPTION         |    8 ++++----
 MD5                 |    4 ++--
 src/cmp_kriging.cpp |    4 ++--
 3 files changed, 8 insertions(+), 8 deletions(-)

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