Title: Data Visualization for Statistics in Social Science
Diff between sjPlot versions 1.6.8 dated 2015-02-02 and 1.6.9 dated 2015-02-15
Description: Collection of several plotting and table output functions for
visualizing data, and utility functions.
Author: Daniel Lüdecke
Maintainer: Daniel Lüdecke
DESCRIPTION | 8
MD5 | 199 ++---
NAMESPACE | 188 ++--
NEWS | 902 +++++++++++------------
R/helpfunctions.R | 978 ++++++++++++------------
R/sjImportSPSS.R | 859 +++++++++++----------
R/sjPlotAnova.R | 9
R/sjPlotDist.R |only
R/sjPlotFrequencies.R | 1684 ++++++++++++++++++++++---------------------
R/sjPlotGLME.R | 4
R/sjPlotInteractions.R | 19
R/sjPlotLinreg.R | 47 -
R/sjPlotScatter.R | 28
R/sjPlotSetTheme.R | 42 -
R/sjRecode.R | 8
R/sjStatistics.R | 29
R/sjTabCorr.R | 1036 +++++++++++++-------------
R/sjTabDataFrame.R | 14
R/sjTabFrequencies.R | 1324 +++++++++++++++++----------------
R/sjTabGrpmean.R | 340 ++++----
R/sjTabItemAnalysis.R | 842 ++++++++++-----------
R/sjTabLinReg.R | 1604 ++++++++++++++++++++--------------------
R/sjTabOdds.R | 1432 ++++++++++++++++++------------------
R/sjTabPCA.R | 14
R/sjTabPropTable.R | 1658 +++++++++++++++++++++---------------------
R/sjTabSPSS.R | 14
R/sjTabStackFrq.R | 28
README.md | 35
man/efc.Rd | 92 +-
man/sj.setGeomColors.Rd | 52 -
man/sjPlot-package.Rd | 4
man/sjc.cluster.Rd | 180 ++--
man/sjc.dend.Rd | 104 +-
man/sjc.elbow.Rd | 76 -
man/sjc.grpdisc.Rd | 110 +-
man/sjc.kgap.Rd | 134 +--
man/sjc.qclus.Rd | 386 ++++-----
man/sjd.chisq.Rd |only
man/sjd.f.Rd |only
man/sjd.norm.Rd |only
man/sjd.t.Rd |only
man/sji.SPSS.Rd | 107 +-
man/sji.convertToLabel.Rd | 80 +-
man/sji.convertToValue.Rd | 78 -
man/sji.getValueLabels.Rd | 94 +-
man/sji.getVariableLabels.Rd | 92 +-
man/sji.setValueLabels.Rd | 98 +-
man/sji.setVariableLabels.Rd | 124 +--
man/sji.viewSPSS.Rd | 252 +++---
man/sjp.aov1.Rd | 311 ++++---
man/sjp.chi2.Rd | 122 +--
man/sjp.corr.Rd | 248 +++---
man/sjp.emm.int.Rd | 268 +++---
man/sjp.frq.Rd | 589 +++++++--------
man/sjp.glm.Rd | 394 +++++-----
man/sjp.glmer.Rd | 420 +++++-----
man/sjp.glmm.Rd | 324 ++++----
man/sjp.grpfrq.Rd | 562 +++++++-------
man/sjp.int.Rd | 450 +++++------
man/sjp.likert.Rd | 442 +++++------
man/sjp.lm.Rd | 486 ++++++------
man/sjp.lmer.Rd | 384 ++++-----
man/sjp.lmm.Rd | 310 +++----
man/sjp.pca.Rd | 288 +++----
man/sjp.scatter.Rd | 314 ++++----
man/sjp.setTheme.Rd | 22
man/sjp.stackfrq.Rd | 360 ++++-----
man/sjp.xtab.Rd | 470 ++++++------
man/sjs.aov1.levene.Rd | 56 -
man/sjs.chi2.gof.Rd | 78 -
man/sjs.cramer.Rd | 54 -
man/sjs.cronbach.Rd | 60 -
man/sjs.etasq.Rd | 100 +-
man/sjs.mic.Rd | 98 +-
man/sjs.mwu.Rd | 114 +-
man/sjs.phi.Rd | 54 -
man/sjs.reliability.Rd | 178 ++--
man/sjs.se.Rd | 42 -
man/sjs.stdb.Rd | 94 +-
man/sjs.table.values.Rd | 80 +-
man/sjt.corr.Rd | 363 ++++-----
man/sjt.df.Rd | 295 +++----
man/sjt.frq.Rd | 450 +++++------
man/sjt.glm.Rd | 512 ++++++-------
man/sjt.grpmean.Rd | 162 ++--
man/sjt.itemanalysis.Rd | 397 +++++-----
man/sjt.lm.Rd | 557 +++++++-------
man/sjt.pca.Rd | 358 ++++-----
man/sjt.stackfrq.Rd | 397 +++++-----
man/sjt.xtab.Rd | 453 +++++------
man/sju.adjustPlotRange.y.Rd | 90 +-
man/sju.dicho.Rd | 78 -
man/sju.groupString.Rd | 98 +-
man/sju.groupVar.Rd | 132 +--
man/sju.groupVarLabels.Rd | 150 +--
man/sju.mean.n.Rd | 80 +-
man/sju.recode.Rd | 48 -
man/sju.recodeTo.Rd | 96 +-
man/sju.setNA.Rd | 62 -
man/sju.strpos.Rd | 138 +--
man/sju.weight.Rd | 78 -
man/sju.weight2.Rd | 90 +-
man/sju.wordwrap.Rd | 56 -
103 files changed, 14423 insertions(+), 13897 deletions(-)
Title: Zebra-Striped Tables in LaTeX and HTML Formats
Diff between ztable versions 0.1.4 dated 2015-02-06 and 0.1.5 dated 2015-02-15
Description: Makes zebra-striped tables (tables with alternating row colors)
in LaTeX and HTML formats easily from a data.frame, matrix, lm, aov, anova,
glm, coxph, nls, fitdistr, mytable and cbind.mytable objects.
Author: Keon-Woong Moon [aut, cre]
Maintainer: Keon-Woong Moon
DESCRIPTION | 8
MD5 | 139
NAMESPACE | 2
NEWS | 11
R/print.ztable.html.R | 104
R/ztable.R | 5
R/ztable1.R | 44
R/zzz.R | 2
README.md | 9581 ++++++++++++++++++++++----------------------
inst/doc/ztable.R | 29
inst/doc/ztable.Rmd | 41
inst/doc/ztable.html | 3992 +++++++++++++-----
man/addCellColor.Rd | 3
man/addColColor.Rd | 3
man/addRowColor.Rd | 3
man/addSubColNames.Rd | 3
man/addcgroup.Rd | 3
man/addrgroup.Rd | 3
man/align2html.Rd | 3
man/align2lines.Rd | 3
man/align2nd.Rd | 3
man/alignCheck.Rd | 3
man/alignCount.Rd | 3
man/cGroupSpan.Rd | 3
man/caption2minipage.Rd | 3
man/colGroupCount.Rd | 3
man/data2table.Rd | 3
man/define_colors.Rd | 3
man/extractAlign.Rd | 3
man/getNewAlign.Rd | 3
man/getNewSpanCol.Rd | 3
man/getNewSpanRow.Rd | 3
man/getspanRowData.Rd | 3
man/getspanRowLength.Rd | 3
man/hlines.Rd |only
man/isGroupCol.Rd | 3
man/isspanCol.Rd | 3
man/isspanRow.Rd | 3
man/make.cell.color.Rd | 3
man/myhtmlStyle.Rd | 3
man/name2rgb.Rd | 3
man/parallelTables.Rd | 3
man/parallelTablesHTML.Rd | 3
man/parallelTablesLatex.Rd | 3
man/print.ztable.Rd | 3
man/printHTMLHead.Rd | 3
man/printLatexHead.Rd | 3
man/printRowGroup.Rd | 3
man/print_ztable.Rd | 3
man/repColor.Rd | 3
man/spanCol.Rd | 3
man/spanColWidth.Rd | 3
man/spanRow.Rd | 3
man/tableLength.Rd | 3
man/totalCol.Rd | 3
man/tr.Rd | 3
man/tr2.Rd | 3
man/update_ztable.Rd | 3
man/validColor.Rd | 3
man/validColor2.Rd | 3
man/vline2align.Rd | 3
man/vlines.Rd | 5
man/zcolors.Rd | 3
man/ztable.Rd | 13
man/ztable.cbind.mytable.Rd | 3
man/ztable.mytable.Rd | 3
man/ztable2html.Rd | 3
man/ztable2latex.Rd | 3
man/ztable2viewer.Rd | 3
man/ztable_sub.Rd | 3
vignettes/ztable.Rmd | 41
71 files changed, 8304 insertions(+), 5878 deletions(-)
Title: Sparse Biclustering of Transposable Data
Diff between sparseBC versions 1.0 dated 2013-10-02 and 1.1 dated 2015-02-15
Description: Implements the sparse biclustering proposal of Tan and Witten (2014), Sparse biclustering of transposable data. Journal of Computational and Graphical Statistics 23(4):985-1008.
Author: Kean Ming Tan
Maintainer: Kean Ming Tan
DESCRIPTION | 13 +++++++------
MD5 | 30 +++++++++++++++++++-----------
NAMESPACE | 12 +++++++++++-
R/image.matrixBC.R |only
R/image.sparseBC.R |only
R/matrixBC.R | 16 +++++++++++++++-
R/print.matrixBC.R |only
R/print.sparseBC.R |only
R/sparseBC.R | 29 ++++++++++++++++++++++++++---
R/summary.matrixBC.R |only
R/summary.sparseBC.R |only
man/image.sparseBC.Rd |only
man/lung.Rd | 2 +-
man/matrixBC.BIC.Rd | 8 ++++----
man/matrixBC.Rd | 31 ++++++++++++++++++++++---------
man/sparseBC-package.Rd | 42 +++++++++++++++++++++++-------------------
man/sparseBC.BIC.Rd | 6 +++---
man/sparseBC.Rd | 29 +++++++++++++++++++++--------
man/sparseBC.choosekr.Rd | 34 +++++++++++++++++-----------------
man/summary.sparseBC.Rd |only
20 files changed, 169 insertions(+), 83 deletions(-)
Title: Spectral Analysis for Physical Applications
Diff between sapa versions 2.0-0 dated 2013-12-30 and 2.0-1 dated 2015-02-15
Description: Software for the book Spectral Analysis for Physical
Applications, Donald B. Percival and Andrew T. Walden,
Cambridge University Press, 1993.
Author: William Constantine and Donald Percival (Applied Physics
Laboratory, University of Washington)
Maintainer: Don Percival
DESCRIPTION | 10
MD5 | 10
NAMESPACE | 3
man/ACVS.Rd | 82 ++++----
man/SDF.Rd | 596 +++++++++++++++++++++++++++++------------------------------
man/taper.Rd | 587 +++++++++++++++++++++++++++++-----------------------------
6 files changed, 646 insertions(+), 642 deletions(-)
Title: Bayesian Optimal Interval Design for Phase I Clinical Trials
Diff between BOIN versions 1.0 dated 2014-09-19 and 1.1 dated 2015-02-15
Description: The Bayesian optimal interval (BOIN) design is a novel phase I clinical trial design for finding the maximum tolerated dose (MTD). The BOIN design is motivated by the top priority and concern of clinicians when testing a new drug, which is to effectively treat patients and minimize the chance of exposing them to subtherapeutic or overly toxic doses. The prominent advantage of the BOIN design is that it achieves simplicity and superior performance at the same time. The BOIN design is algorithm-based and can be implemented in a simple way similar to the traditional 3+3 design. The BOIN design yields average performance comparable to the continual reassessment method (CRM, one of the best model-based design) in terms of selecting the MTD, but has a substantially lower risk of assigning patients to subtherapeutic or overly toxic doses.
Author: Ying Yuan and Suyu Liu
Maintainer: Ying Yuan
DESCRIPTION | 8 ++++----
MD5 | 14 +++++++-------
R/get.boundary.R | 32 ++++++++++++++++++--------------
R/get.oc.R | 43 ++++++++++++++++++++++++-------------------
man/BOIN-package.Rd | 6 +++---
man/get.boundary.Rd | 18 +++++++++++++-----
man/get.oc.Rd | 19 ++++++++++++++-----
man/select.mtd.Rd | 2 +-
8 files changed, 84 insertions(+), 58 deletions(-)