Previous versions (as known to CRANberries) which should be available via the Archive link are:
2013-07-05 1.2
2013-03-19 1.1
2012-11-06 1.0
Title: Generating Synthetic Versions of Sensitive Microdata for
Statistical Disclosure Control
Description: A tool for producing synthetic versions of microdata containing confidential information so that they are safe to be released to users for exploratory analysis. The key objective of generating synthetic data is to replace sensitive original values with synthetic ones causing minimal distortion of the statistical information contained in the data set. Variables, which can be categorical or continuous, are synthesised one-by-one using sequential modelling. Replacements are generated by drawing from conditional distributions fitted to the original data using parametric or classification and regression trees models. Data are synthesised via the function syn() which can be largely automated, if default settings are used, or with methods defined by the user. Optional parameters can be used to influence the disclosure risk and the analytical quality of the synthesised data.
Author: Beata Nowok, Gillian M Raab and Chris Dibben
Maintainer: Beata Nowok
Diff between synthpop versions 1.0-0 dated 2014-08-18 and 1.1-0 dated 2015-02-20
synthpop-1.0-0/synthpop/vignettes/Zcompare.pdf |only synthpop-1.0-0/synthpop/vignettes/income.pdf |only synthpop-1.0-0/synthpop/vignettes/incomeNA.pdf |only synthpop-1.0-0/synthpop/vignettes/ls.pdf |only synthpop-1.1-0/synthpop/DESCRIPTION | 18 synthpop-1.1-0/synthpop/MD5 | 72 +-- synthpop-1.1-0/synthpop/NAMESPACE | 20 synthpop-1.1-0/synthpop/NEWS |only synthpop-1.1-0/synthpop/R/IO.r |only synthpop-1.1-0/synthpop/R/compare.syn.r | 438 +++++++++----------- synthpop-1.1-0/synthpop/R/functions.syn.r | 25 - synthpop-1.1-0/synthpop/R/methods.syn.r | 78 ++- synthpop-1.1-0/synthpop/R/padMis.syn.r | 47 +- synthpop-1.1-0/synthpop/R/padModel.syn.r | 60 +- synthpop-1.1-0/synthpop/R/sampler.syn.r | 30 - synthpop-1.1-0/synthpop/R/syn.r | 296 +++++++------ synthpop-1.1-0/synthpop/build/vignette.rds |binary synthpop-1.1-0/synthpop/inst/doc/synthpop.R | 157 +++---- synthpop-1.1-0/synthpop/inst/doc/synthpop.Rnw | 238 +++++----- synthpop-1.1-0/synthpop/inst/doc/synthpop.pdf |binary synthpop-1.1-0/synthpop/man/compare.fit.synds.Rd | 71 ++- synthpop-1.1-0/synthpop/man/compare.synds.Rd | 34 + synthpop-1.1-0/synthpop/man/glm.synds.Rd | 28 - synthpop-1.1-0/synthpop/man/read.obs.Rd |only synthpop-1.1-0/synthpop/man/replicated.uniques.Rd |only synthpop-1.1-0/synthpop/man/sdc.Rd |only synthpop-1.1-0/synthpop/man/summary.fit.synds.Rd | 62 +- synthpop-1.1-0/synthpop/man/summary.synds.Rd | 4 synthpop-1.1-0/synthpop/man/syn.Rd | 183 ++++---- synthpop-1.1-0/synthpop/man/syn.cart.Rd | 1 synthpop-1.1-0/synthpop/man/syn.lognorm.Rd |only synthpop-1.1-0/synthpop/man/syn.norm.Rd | 6 synthpop-1.1-0/synthpop/man/syn.normrank.Rd | 4 synthpop-1.1-0/synthpop/man/syn.pmm.Rd | 2 synthpop-1.1-0/synthpop/man/syn.polr.Rd | 4 synthpop-1.1-0/synthpop/man/syn.sample.Rd | 2 synthpop-1.1-0/synthpop/man/syn.surv.ctree.Rd | 2 synthpop-1.1-0/synthpop/man/synthpop-package.Rd | 20 synthpop-1.1-0/synthpop/man/write.syn.Rd |only synthpop-1.1-0/synthpop/vignettes/Figure1ls.pdf |only synthpop-1.1-0/synthpop/vignettes/Figure2income.pdf |only synthpop-1.1-0/synthpop/vignettes/Figure3Z.pdf |only synthpop-1.1-0/synthpop/vignettes/synthpop.Rnw | 238 +++++----- synthpop-1.1-0/synthpop/vignettes/synthpop.bib | 435 +++++++++++++------ 44 files changed, 1425 insertions(+), 1150 deletions(-)
Title: Soil Database Interface
Description: A collection of functions for reading data from USDA-NCSS soil databases.
Author: D.E. Beaudette and J.M. Skovlin
Maintainer: D.E. Beaudette
Diff between soilDB versions 1.3-2 dated 2014-04-30 and 1.5 dated 2015-02-20
DESCRIPTION | 19 ++--- MD5 | 95 ++++++++++++++-------------- NAMESPACE | 28 ++++++-- NEWS | 28 +++++++- R/MUKEYS_by_ll_bbox.R | 9 +- R/SDA_query.R | 14 ++-- R/SSURGO_spatial_query.R |only R/fetchHenry.R |only R/fetchKSSL.R | 4 - R/fetchNASIS.R | 85 +++++++++++++++++++------ R/fetchNASISLabData.R | 7 +- R/fetchOSD.R | 3 R/fetchPedonPC.R | 11 +++ R/fetchRaCA.R | 14 ++-- R/fetchSCAN.R | 3 R/get_colors_from_NASIS_db.R | 44 ++++++++----- R/get_colors_from_pedon_db.R | 10 ++- R/get_extended_data_from_NASIS_db.R | 86 ++++++++++++++------------ R/get_extended_data_from_pedon_db.R | 20 +++--- R/get_hz_data_from_NASIS_db.R | 12 ++- R/get_hz_data_from_pedon_db.R | 12 ++- R/get_lablayer_data_from_NASIS_db.R | 11 ++- R/get_labpedon_data_from_NASIS_db.R | 11 ++- R/get_site_data_from_NASIS_db.R | 12 ++- R/get_site_data_from_pedon_db.R | 11 ++- R/get_text_notes_from_NASIS_db.R | 19 +++-- R/get_veg_from_AK_Site.R | 10 ++- R/get_veg_from_MT_veg_db.R | 9 +- R/get_veg_from_NPS_PLOTS_db.R | 11 ++- R/get_veg_other_from_MT_veg_db.R | 10 ++- R/get_veg_species_from_MT_veg_db.R | 11 ++- R/mapunit_geom_by_ll_bbox.R | 11 +-- R/mix_and_clean_colors.R | 54 +++++++++------- R/nasis_component_data.R | 37 +++++++---- R/seriesExtent.R | 61 +++++++++--------- R/utils.R | 109 ++++++++++++++++++++++++++++++++- data/andic.subset.rda |binary data/cisne.rda |binary data/gSSURGO.chunk.rda |binary data/gopheridge.rda |binary data/loafercreek.rda |binary man/MUKEYS_by_ll_bbox.Rd | 6 - man/SSURGO_spatial_query.Rd |only man/fetchNASIS.Rd | 4 - man/fetchOSD.Rd | 2 man/fetchRaCA.Rd | 7 +- man/fetchSCAN.Rd | 1 man/gSSURGO.chunk.Rd | 2 man/get_extended_data_from_pedon_db.Rd | 2 man/seriesExtent.Rd | 6 - 50 files changed, 615 insertions(+), 306 deletions(-)
Title: Package Management Tool
Description: Tools to more conveniently perform tasks
associated with add-on packages. pacman conveniently wraps library and
package related functions and names them in an intuitive and consistent
fashion. It seeks to combine functionality from lower level functions which
can speed up workflow.
Author: Tyler Rinker [aut, cre, ctb], Dason Kurkiewicz [aut, ctb]
Maintainer: Tyler Rinker
Diff between pacman versions 0.2.0 dated 2015-02-15 and 0.3.0 dated 2015-02-20
DESCRIPTION | 10 +++++----- MD5 | 10 +++++----- NEWS | 12 ++++++++++++ README.md | 2 +- inst/CITATION | 4 ++-- inst/doc/Introduction_to_pacman.html | 16 ++++++++-------- 6 files changed, 33 insertions(+), 21 deletions(-)
Title: Compute the Personalized Activity Index Based on a Flexible
Bayesian Negative Binomial Model
Description: The functions in this package implement the safety monitoring procedures proposed in the paper titled "A flexible mixed effect negative binomial regression model for detecting unusual increases in MRI lesion counts in individual multiple sclerosis patients" by Kondo, Y., Zhao, Y. and Petkau, A.J. The procedure first models longitudinally collected count variables with a negative binomial mixed-effect regression model. To account for the correlation among repeated measures from the same patient, the model has subject-specific random intercept, which is modelled with the infinite mixture of Beta distributions, very flexible distribution that theoretically allows any form. The package also has the option of a single beta distribution for random effects. These mixed-effect models could be useful beyond the application of the safety monitoring. The inference is based on MCMC samples and this package contains a Gibbs sampler to sample from the posterior distribution of the negative binomial mixed-effect regression model. Based on the fitted model, the personalized activity index is computed for each patient. Lastly, this package is companion to R package lmeNB, which contains the functions to compute the Personalized Activity Index in the frequentist framework.
Author: Yumi Kondo
Maintainer: Yumi Kondo
Diff between lmeNBBayes versions 1.3 dated 2015-01-20 and 1.3.1 dated 2015-02-20
DESCRIPTION | 12 ++++++------ MD5 | 16 ++++++++-------- NAMESPACE | 7 +++++++ R/nbinDPmix_C.R | 2 +- man/dqmix.Rd | 3 +-- man/getDIC.Rd | 5 ++--- man/getS.StatInMed.Rd | 3 +-- man/index_batch_Bayes.Rd | 3 +-- man/lmeNBBayes.Rd | 3 +-- 9 files changed, 28 insertions(+), 26 deletions(-)
Title: Retrieval Functions for USGS and EPA Hydrologic and Water
Quality Data
Description: Collection of functions to help retrieve U.S. Geological Survey
(USGS) and U.S. Environmental Protection Agency (EPA) water quality and
hydrology data from web services. USGS web services are discovered from the
National Water Information System (NWIS) tools. Both EPA and USGS water
quality data are obtained from the Water Quality Portal.
Author: Robert Hirsch [aut],
Laura DeCicco [aut, cre],
David Lorenz [aut]
Maintainer: Laura DeCicco
Diff between dataRetrieval versions 2.1.1 dated 2015-01-30 and 2.1.2 dated 2015-02-20
dataRetrieval-2.1.1/dataRetrieval/inst/tests |only dataRetrieval-2.1.2/dataRetrieval/DESCRIPTION | 13 dataRetrieval-2.1.2/dataRetrieval/MD5 | 75 +- dataRetrieval-2.1.2/dataRetrieval/NAMESPACE | 2 dataRetrieval-2.1.2/dataRetrieval/NEWS | 1 dataRetrieval-2.1.2/dataRetrieval/R/getWebServiceData.R | 2 dataRetrieval-2.1.2/dataRetrieval/R/importWQP.R | 22 dataRetrieval-2.1.2/dataRetrieval/R/importWaterML1.r | 3 dataRetrieval-2.1.2/dataRetrieval/R/readNWISdata.r | 45 + dataRetrieval-2.1.2/dataRetrieval/R/readNWISdv.r | 5 dataRetrieval-2.1.2/dataRetrieval/R/readNWISpCode.r | 4 dataRetrieval-2.1.2/dataRetrieval/R/readNWISqw.r | 103 ++- dataRetrieval-2.1.2/dataRetrieval/R/readNWISunit.r | 10 dataRetrieval-2.1.2/dataRetrieval/R/readWQPdata.R | 3 dataRetrieval-2.1.2/dataRetrieval/R/renameColumns.R | 2 dataRetrieval-2.1.2/dataRetrieval/R/tabbedDataRetrievals.R | 58 ++ dataRetrieval-2.1.2/dataRetrieval/R/whatNWISsites.R | 5 dataRetrieval-2.1.2/dataRetrieval/inst/doc/dataRetrieval.R | 274 ++++------ dataRetrieval-2.1.2/dataRetrieval/inst/doc/dataRetrieval.Rnw | 110 +--- dataRetrieval-2.1.2/dataRetrieval/inst/doc/dataRetrieval.pdf |binary dataRetrieval-2.1.2/dataRetrieval/inst/extdata/temperatureAndFlow.RData |only dataRetrieval-2.1.2/dataRetrieval/man/dataRetrieval-package.Rd | 2 dataRetrieval-2.1.2/dataRetrieval/man/pCodeToName.Rd |only dataRetrieval-2.1.2/dataRetrieval/man/parameterCdFile.Rd |only dataRetrieval-2.1.2/dataRetrieval/man/readNWISdata.Rd | 10 dataRetrieval-2.1.2/dataRetrieval/man/readNWISdv.Rd | 5 dataRetrieval-2.1.2/dataRetrieval/man/readNWISgwl.Rd | 2 dataRetrieval-2.1.2/dataRetrieval/man/readNWISmeas.Rd | 2 dataRetrieval-2.1.2/dataRetrieval/man/readNWISpCode.Rd | 4 dataRetrieval-2.1.2/dataRetrieval/man/readNWISpeak.Rd | 2 dataRetrieval-2.1.2/dataRetrieval/man/readNWISqw.Rd | 36 + dataRetrieval-2.1.2/dataRetrieval/man/readNWISrating.Rd | 2 dataRetrieval-2.1.2/dataRetrieval/man/readNWISuv.Rd | 2 dataRetrieval-2.1.2/dataRetrieval/man/renameNWISColumns.Rd | 2 dataRetrieval-2.1.2/dataRetrieval/tests |only dataRetrieval-2.1.2/dataRetrieval/vignettes/dataRetrieval-concordance.tex | 13 dataRetrieval-2.1.2/dataRetrieval/vignettes/dataRetrieval.Rnw | 110 +--- dataRetrieval-2.1.2/dataRetrieval/vignettes/figure/getNWIStemperaturePlot-1.pdf |binary 38 files changed, 526 insertions(+), 403 deletions(-)
Title: Analysis of Spatially Distributed Data
Description: A processing program for spatially distributed data.
It features graphing tools, query building, and polygon clipping.
A graphical user interface is provided.
Author: Jason C. Fisher
Maintainer: Jason C. Fisher
Diff between RSurvey versions 0.8-2 dated 2014-09-24 and 0.8-3 dated 2015-02-20
DESCRIPTION | 14 +++--- MD5 | 82 ++++++++++++++++++------------------- NEWS | 7 +++ R/BuildPackage.R | 3 - R/Data.R | 2 R/LoadPackages.R | 104 ++++++++++++++++++++++++++++++++--------------- R/ManageVariables.R | 5 +- R/SetSortOrder.R | 4 - README.md | 18 ++++---- data/ex.project.RData |binary man/Autocrop.Rd | 2 man/AutocropRegion.Rd | 2 man/BuildHistogram.Rd | 2 man/ChooseColor.Rd | 2 man/ChoosePch.Rd | 2 man/EditData.Rd | 2 man/EditFunction.Rd | 2 man/EditText.Rd | 2 man/ExportData.Rd | 2 man/Format.Rd | 2 man/FormatDateTime.Rd | 2 man/GetBitmapImage.Rd | 2 man/GetFile.Rd | 2 man/ImportPackage.Rd | 2 man/ImportSpreadsheet.Rd | 2 man/ImportText.Rd | 2 man/LoadPackages.Rd | 2 man/ManagePolygons.Rd | 2 man/ManageVariables.Rd | 2 man/OpenRSurvey.Rd | 2 man/Plot3d.Rd | 2 man/ProgressBar.Rd | 2 man/RSurvey-package.Rd | 2 man/Rename.Rd | 2 man/Search.Rd | 2 man/SetAxesLimits.Rd | 2 man/SetConfiguration.Rd | 2 man/SetInterpolation.Rd | 2 man/SetPolygonLimits.Rd | 2 man/SetSortOrder.Rd | 2 man/ex.data.Rd | 2 man/ex.project.Rd | 2 42 files changed, 175 insertions(+), 128 deletions(-)
Title: Analysis of Heavy Tailed Distributions
Description: An implementation of maximum likelihood estimators for a variety
of heavy tailed distributions, including both the discrete and continuous
power law distributions. Additionally, a goodness-of-fit based approach is
used to estimate the lower cut-off for the scaling region.
Author: Colin Gillespie [aut, cre]
Maintainer: Colin Gillespie
Diff between poweRlaw versions 0.20.5 dated 2014-06-12 and 0.30.0 dated 2015-02-20
poweRlaw-0.20.5/poweRlaw/tests |only poweRlaw-0.20.5/poweRlaw/vignettes/plpva.r |only poweRlaw-0.30.0/poweRlaw/DESCRIPTION | 20 - poweRlaw-0.30.0/poweRlaw/MD5 | 134 +++++------ poweRlaw-0.30.0/poweRlaw/NAMESPACE | 5 poweRlaw-0.30.0/poweRlaw/NEWS | 22 + poweRlaw-0.30.0/poweRlaw/R/AllGenerics.R | 30 +- poweRlaw-0.30.0/poweRlaw/R/bootstrap.R | 34 +- poweRlaw-0.30.0/poweRlaw/R/bootstrap_p.R | 38 +-- poweRlaw-0.30.0/poweRlaw/R/checks.R | 6 poweRlaw-0.30.0/poweRlaw/R/data_help_files.R | 26 +- poweRlaw-0.30.0/poweRlaw/R/def_conexp.R | 48 +++ poweRlaw-0.30.0/poweRlaw/R/def_conlorm.R | 49 +++- poweRlaw-0.30.0/poweRlaw/R/def_conpl.R | 32 +- poweRlaw-0.30.0/poweRlaw/R/def_disexp.R | 24 + poweRlaw-0.30.0/poweRlaw/R/def_dislnorm.R | 32 +- poweRlaw-0.30.0/poweRlaw/R/def_displ.R | 42 ++- poweRlaw-0.30.0/poweRlaw/R/def_dispois.R | 29 +- poweRlaw-0.30.0/poweRlaw/R/dist_data_cdf_methods.R | 65 ++--- poweRlaw-0.30.0/poweRlaw/R/estimate_xmin.R | 118 ++++++--- poweRlaw-0.30.0/poweRlaw/R/lines_methods.R | 2 poweRlaw-0.30.0/poweRlaw/build/vignette.rds |binary poweRlaw-0.30.0/poweRlaw/data/bootstrap_moby.RData |binary poweRlaw-0.30.0/poweRlaw/data/bootstrap_p_moby.RData |binary poweRlaw-0.30.0/poweRlaw/demo/moby.R | 4 poweRlaw-0.30.0/poweRlaw/inst/CITATION | 29 +- poweRlaw-0.30.0/poweRlaw/inst/doc/compare_distributions.Rnw | 2 poweRlaw-0.30.0/poweRlaw/inst/doc/compare_distributions.pdf |binary poweRlaw-0.30.0/poweRlaw/inst/doc/examples.R | 92 ++++--- poweRlaw-0.30.0/poweRlaw/inst/doc/examples.Rnw | 123 +++++----- poweRlaw-0.30.0/poweRlaw/inst/doc/examples.pdf |binary poweRlaw-0.30.0/poweRlaw/inst/doc/poweRlaw.R | 36 +- poweRlaw-0.30.0/poweRlaw/inst/doc/poweRlaw.Rnw | 48 +-- poweRlaw-0.30.0/poweRlaw/inst/doc/poweRlaw.pdf |binary poweRlaw-0.30.0/poweRlaw/inst/doc/v61i10.Rnw |only poweRlaw-0.30.0/poweRlaw/inst/doc/v61i10.pdf |only poweRlaw-0.30.0/poweRlaw/man/bootstrap_moby.Rd | 26 +- poweRlaw-0.30.0/poweRlaw/man/compare_distributions.Rd | 3 poweRlaw-0.30.0/poweRlaw/man/displ.Rd | 3 poweRlaw-0.30.0/poweRlaw/man/dist_cdf-methods.Rd | 53 ++-- poweRlaw-0.30.0/poweRlaw/man/dist_data_cdf-methods.Rd | 30 +- poweRlaw-0.30.0/poweRlaw/man/dist_ll-methods.Rd | 3 poweRlaw-0.30.0/poweRlaw/man/dist_pdf-methods.Rd | 3 poweRlaw-0.30.0/poweRlaw/man/dist_rand-methods.Rd | 9 poweRlaw-0.30.0/poweRlaw/man/dplcon.Rd | 3 poweRlaw-0.30.0/poweRlaw/man/dpldis.Rd | 3 poweRlaw-0.30.0/poweRlaw/man/estimate_pars.Rd | 3 poweRlaw-0.30.0/poweRlaw/man/estimate_xmin.Rd | 54 ++-- poweRlaw-0.30.0/poweRlaw/man/moby.Rd | 6 poweRlaw-0.30.0/poweRlaw/man/native_american.Rd | 3 poweRlaw-0.30.0/poweRlaw/man/plot-distribution-ANY-method.Rd | 17 - poweRlaw-0.30.0/poweRlaw/man/plot.bs_xmin.Rd | 3 poweRlaw-0.30.0/poweRlaw/man/population.Rd | 3 poweRlaw-0.30.0/poweRlaw/man/poweRlaw-package.Rd | 3 poweRlaw-0.30.0/poweRlaw/man/show-distribution-method.Rd | 3 poweRlaw-0.30.0/poweRlaw/man/swiss_prot.Rd | 3 poweRlaw-0.30.0/poweRlaw/vignettes/compare_distributions.Rnw | 2 poweRlaw-0.30.0/poweRlaw/vignettes/examples.Rnw | 123 +++++----- poweRlaw-0.30.0/poweRlaw/vignettes/examples1.rds |only poweRlaw-0.30.0/poweRlaw/vignettes/figure1.pdf |only poweRlaw-0.30.0/poweRlaw/vignettes/figure2.pdf |only poweRlaw-0.30.0/poweRlaw/vignettes/figure3.pdf |only poweRlaw-0.30.0/poweRlaw/vignettes/figure4.pdf |only poweRlaw-0.30.0/poweRlaw/vignettes/figure5.pdf |only poweRlaw-0.30.0/poweRlaw/vignettes/jsslogo.jpg |only poweRlaw-0.30.0/poweRlaw/vignettes/plfit_res.rds |only poweRlaw-0.30.0/poweRlaw/vignettes/poweRlaw.Rnw | 48 +-- poweRlaw-0.30.0/poweRlaw/vignettes/poweRlaw.bib | 46 +-- poweRlaw-0.30.0/poweRlaw/vignettes/v61i10.Rnw |only poweRlaw-0.30.0/poweRlaw/vignettes/v61i10.bib |only 70 files changed, 917 insertions(+), 626 deletions(-)
Title: Bayesian Reconstruction of Disease Outbreaks by Combining
Epidemiologic and Genomic Data
Description: Bayesian reconstruction of disease outbreaks using epidemiological and genetic information.
Author: Thibaut Jombart
Maintainer: Thibaut Jombart
Diff between outbreaker versions 1.1-4 dated 2014-12-05 and 1.1-5 dated 2015-02-20
ChangeLog | 14 ++++++++++++-- DESCRIPTION | 14 +++++++------- MD5 | 14 +++++++------- NAMESPACE | 15 +++++++++++---- data/fakeOutbreak.RData |binary src/likelihood.c | 19 ++++++++++++++++--- src/likelihood.h | 3 +++ src/outbreaker.c | 12 ++++++------ 8 files changed, 62 insertions(+), 29 deletions(-)
Title: Maximally Selected Rank Statistics
Description: Maximally selected rank statistics with
several p-value approximations.
Author: Torsten Hothorn
Maintainer: Torsten Hothorn
Diff between maxstat versions 0.7-21 dated 2015-01-19 and 0.7-22 dated 2015-02-20
DESCRIPTION | 8 ++++---- MD5 | 8 ++++---- NAMESPACE | 2 ++ inst/NEWS | 4 ++++ inst/doc/maxstat.pdf |binary 5 files changed, 14 insertions(+), 8 deletions(-)
Title: Convert Spatial Grids to Polygons
Description: Converts a spatial object from class SpatialGridDataFrame to
SpatialPolygonsDataFrame.
Author: Jason C. Fisher
Maintainer: Jason C. Fisher
Diff between Grid2Polygons versions 0.1-4 dated 2013-08-31 and 0.1-5 dated 2015-02-20
Grid2Polygons-0.1-4/Grid2Polygons/README.md |only Grid2Polygons-0.1-5/Grid2Polygons/DESCRIPTION | 12 ++++++------ Grid2Polygons-0.1-5/Grid2Polygons/MD5 | 9 ++++----- Grid2Polygons-0.1-5/Grid2Polygons/NAMESPACE | 7 +++++++ Grid2Polygons-0.1-5/Grid2Polygons/NEWS | 4 ++++ Grid2Polygons-0.1-5/Grid2Polygons/R/Grid2Polygons.R | 2 +- 6 files changed, 22 insertions(+), 12 deletions(-)
Title: Regression Analysis of Fractional Responses Under Unobserved
Heterogeneity
Description: Estimation and specification analysis of fractional regression models with neglected heterogeneity and/or endogenous covariates.
Author: Joaquim J.S. Ramalho
Maintainer: Joaquim J.S. Ramalho
Diff between frmhet versions 1.0 dated 2014-11-20 and 1.1.2 dated 2015-02-20
DESCRIPTION | 8 +-- MD5 | 12 ++--- R/frmhet.R | 119 +++++++++++++++++++++++++++++++------------------- man/frmhet-package.Rd | 4 - man/frmhet.Rd | 27 ++++++++++- man/frmhet.pe.Rd | 22 ++++++++- man/frmhet.reset.Rd | 19 +++++++ 7 files changed, 149 insertions(+), 62 deletions(-)
Title: Regression Analysis of Fractional Responses
Description: Estimation and specification analysis of one- and two-part fractional regression models and calculation of partial effects.
Author: Joaquim J.S. Ramalho
Maintainer: Joaquim J.S. Ramalho
Diff between frm versions 1.2 dated 2014-05-27 and 1.2.2 dated 2015-02-20
DESCRIPTION | 16 ++++++++-------- MD5 | 16 ++++++++-------- R/frm.R | 16 ++++++++++------ man/frm-package.Rd | 8 ++++---- man/frm.Rd | 35 ++++++++++++++++++++++++++++++++--- man/frm.ggoff.Rd | 25 +++++++++++++++++++++++-- man/frm.pe.Rd | 38 ++++++++++++++++++++++++++++++++------ man/frm.ptest.Rd | 22 ++++++++++++++++++++++ man/frm.reset.Rd | 24 +++++++++++++++++++++++- 9 files changed, 162 insertions(+), 38 deletions(-)
Title: Exact Distributions for Rank and Permutation Tests
Description: Computes exact conditional p-values and quantiles using an
implementation of the Shift-Algorithm by Streitberg & Roehmel.
Author: Torsten Hothorn [aut, cre],
Kurt Hornik [aut]
Maintainer: Torsten Hothorn
Diff between exactRankTests versions 0.8-27 dated 2013-09-24 and 0.8-28 dated 2015-02-20
DESCRIPTION | 10 +++++----- MD5 | 26 +++++++++++++------------- NAMESPACE | 9 +++++++++ data/ASAT.rda |binary data/bloodp.rda |binary data/ears.rda |binary data/glioma.rda |binary data/globulin.rda |binary data/lungcancer.rda |binary data/neuropathy.rda |binary data/ocarcinoma.rda |binary data/rotarod.rda |binary data/sal.rda |binary inst/NEWS | 4 ++++ 14 files changed, 31 insertions(+), 18 deletions(-)
More information about exactRankTests at CRAN
Permanent link
Title: Conditional Density Estimation Network Construction and
Evaluation
Description: Parameters of a user-specified probability distribution are modelled by a multi-layer perceptron artificial neural network. This framework can be used to implement probabilistic nonlinear models including mixture density networks, heteroscedastic regression models, zero-inflated models, and the like.
Author: Alex J. Cannon
Maintainer: Alex J. Cannon
Diff between CaDENCE versions 1.2.1 dated 2013-06-28 and 1.2.2 dated 2015-02-20
DESCRIPTION | 11 +++++------ MD5 | 10 +++++----- NAMESPACE | 4 +--- R/cadence.fit.R | 27 ++++++++++----------------- man/CaDENCE-package.Rd | 8 ++++---- man/cadence.fit.Rd | 10 +++++++--- 6 files changed, 32 insertions(+), 38 deletions(-)
Title: Algorithms for Quantitative Pedology
Description: A collection of algorithms related to modeling of soil resources, soil classification, soil profile aggregation, and visualization.
Author: Dylan Beaudette
Maintainer: Dylan Beaudette
Diff between aqp versions 1.7-7 dated 2014-11-13 and 1.8 dated 2015-02-20
DESCRIPTION | 13 +- MD5 | 50 +++++----- NEWS | 13 ++ R/SoilProfileCollection-methods.R | 43 ++++++++- R/SoilProfileCollection-spatial.R | 4 R/evalGenHz.R | 106 +++++++++++----------- R/get.ml.hz.R | 2 R/panel.depth_function.R | 17 +-- R/profile_plot.R | 38 ++++---- R/setters.R | 48 +++++++++- R/texture-low-rv-high.R | 168 +++++++++++++++++++----------------- data/amarillo.rda |binary data/ca630.rda |binary data/munsell.rda |binary data/rruff.sample.rda |binary data/sp1.rda |binary data/sp2.rda |binary data/sp3.rda |binary data/sp4.rda |binary data/sp5.rda |binary man/SPC-plotting.Rd | 1 man/SoilProfileCollection-class.Rd | 13 ++ man/addBracket.Rd | 7 + man/hzDistinctnessCodeToOffset.Rd | 2 man/random_profile.Rd | 2 man/texture.triangle.low.rv.high.Rd | 31 ++++-- 26 files changed, 341 insertions(+), 217 deletions(-)
Title: Time Series Analysis and Computational Finance
Description: Time series analysis and computational finance.
Author: Adrian Trapletti [aut],
Kurt Hornik [aut, cre],
Blake LeBaron [ctb] (BDS test code)
Maintainer: Kurt Hornik
Diff between tseries versions 0.10-33 dated 2015-02-10 and 0.10-34 dated 2015-02-20
ChangeLog | 7 +++++++ DESCRIPTION | 6 +++--- MD5 | 6 +++--- R/finance.R | 11 +++++++---- 4 files changed, 20 insertions(+), 10 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2015-02-16 1.0.0
2013-06-11 0.0.1
Title: STK++ Integration to R Using Rcpp
Description: STK++ (http://www.stkpp.org) is a collection of
C++ classes for statistics, clustering, linear algebra, arrays (with an
Eigen-like API), regression, dimension reduction, etc. The integration of
the library to R is using Rcpp. Some functionalities of the Clustering
project provided by the library are available in the R environment as R
functions.
The rtkpp package includes the header files from the STK++
library (currently version 0.8.5). Thus users do not need to
install STK++ itself in order to use it.
STK++ is licensed under the GNU LGPL version 2 or later. rtkpp
(the stkpp integration into R) is licensed under the
GNU GPL version 2 or later.
Author: Serge Iovleff [aut, cre],
Vincent Kubicki [ctb],
Quentin Grimonprez [ctb],
Parmeet Bhatia [ctb]
Maintainer: Serge Iovleff
Diff between rtkpp versions 0.8.4 dated 2014-11-18 and 0.8.5 dated 2015-02-20
rtkpp-0.8.4/rtkpp/inst/AUTHORS |only rtkpp-0.8.4/rtkpp/inst/COPYRIGHTS |only rtkpp-0.8.4/rtkpp/inst/projects/Analysis/include/STK_Funct_util.h |only rtkpp-0.8.4/rtkpp/inst/projects/Arrays/include/STK_ITContainer2D.h |only rtkpp-0.8.4/rtkpp/inst/projects/Arrays/include/STK_Wrappers.h |only rtkpp-0.8.4/rtkpp/inst/projects/Arrays/include/operators/STK_SliceOperators.h |only rtkpp-0.8.4/rtkpp/inst/projects/Arrays/include/products/STK_GeneralByGeneralProduct.h |only rtkpp-0.8.4/rtkpp/inst/projects/Arrays/include/products/STK_GeneralByVectorProduct.h |only rtkpp-0.8.4/rtkpp/inst/projects/Clustering/include/STK_MixtureComponent.h |only rtkpp-0.8.4/rtkpp/inst/projects/Clustering/src/STK_IDataManager.cpp |only rtkpp-0.8.4/rtkpp/inst/projects/Regress/src/STK_BSplineCoefficients.cpp |only rtkpp-0.8.4/rtkpp/inst/projects/Rtkpp/include/STK_RcppMatrix.h |only rtkpp-0.8.4/rtkpp/inst/projects/Rtkpp/include/STK_RcppVector.h |only rtkpp-0.8.5/rtkpp/DESCRIPTION | 19 rtkpp-0.8.5/rtkpp/MD5 | 533 ++-- rtkpp-0.8.5/rtkpp/NAMESPACE | 17 rtkpp-0.8.5/rtkpp/R/ClusterCategorical.R | 14 rtkpp-0.8.5/rtkpp/R/ClusterGamma.R | 7 rtkpp-0.8.5/rtkpp/R/ClusterInit.R | 90 rtkpp-0.8.5/rtkpp/R/ClusterModelNames.R | 86 rtkpp-0.8.5/rtkpp/R/ClusterPlot.R | 4 rtkpp-0.8.5/rtkpp/R/ClusterPoisson.R |only rtkpp-0.8.5/rtkpp/R/ClusterStrategy.R | 8 rtkpp-0.8.5/rtkpp/R/rtkpp.R | 37 rtkpp-0.8.5/rtkpp/R/rtkppFlags.R | 14 rtkpp-0.8.5/rtkpp/build |only rtkpp-0.8.5/rtkpp/cleanup | 2 rtkpp-0.8.5/rtkpp/data/DebTrivedi.rda |only rtkpp-0.8.5/rtkpp/data/HeartDisease.cat.rda |binary rtkpp-0.8.5/rtkpp/data/HeartDisease.cont.rda |binary rtkpp-0.8.5/rtkpp/data/HeartDisease.target.rda |binary rtkpp-0.8.5/rtkpp/data/birds.rda |binary rtkpp-0.8.5/rtkpp/data/car.rda |binary rtkpp-0.8.5/rtkpp/data/geyser.rda |binary rtkpp-0.8.5/rtkpp/data/titanic.rda |binary rtkpp-0.8.5/rtkpp/inst/NEWS.Rd | 8 rtkpp-0.8.5/rtkpp/inst/doc |only rtkpp-0.8.5/rtkpp/inst/include/Algebra.h | 8 rtkpp-0.8.5/rtkpp/inst/include/Analysis.h | 2 rtkpp-0.8.5/rtkpp/inst/include/Arrays.h | 8 rtkpp-0.8.5/rtkpp/inst/include/Clustering.h | 3 rtkpp-0.8.5/rtkpp/inst/include/RTKpp.h | 7 rtkpp-0.8.5/rtkpp/inst/include/RTKppForward.h | 43 rtkpp-0.8.5/rtkpp/inst/include/STKpp.h | 130 - rtkpp-0.8.5/rtkpp/inst/include/STatistiK.h | 1 rtkpp-0.8.5/rtkpp/inst/include/StatModels.h | 4 rtkpp-0.8.5/rtkpp/inst/projects/AAModels/include/STK_GaussianAAModel.h | 18 rtkpp-0.8.5/rtkpp/inst/projects/AAModels/include/STK_IAAModel.h | 42 rtkpp-0.8.5/rtkpp/inst/projects/AAModels/include/STK_LinearAAModel.h | 12 rtkpp-0.8.5/rtkpp/inst/projects/AAModels/src/STK_GaussianAAModel.cpp | 16 rtkpp-0.8.5/rtkpp/inst/projects/AAModels/src/STK_IAAModel.cpp | 16 rtkpp-0.8.5/rtkpp/inst/projects/AAModels/src/STK_LinearAAModel.cpp | 20 rtkpp-0.8.5/rtkpp/inst/projects/AAModels/src/makefile | 2 rtkpp-0.8.5/rtkpp/inst/projects/AAModels/src/makevars.local |only rtkpp-0.8.5/rtkpp/inst/projects/Algebra/include/STK_Givens.h | 10 rtkpp-0.8.5/rtkpp/inst/projects/Algebra/include/STK_Householder.h | 16 rtkpp-0.8.5/rtkpp/inst/projects/Algebra/include/STK_IQr.h | 27 rtkpp-0.8.5/rtkpp/inst/projects/Algebra/include/STK_ISymEigen.h | 18 rtkpp-0.8.5/rtkpp/inst/projects/Algebra/include/STK_Qr.h | 4 rtkpp-0.8.5/rtkpp/inst/projects/Algebra/include/STK_Svd.h | 42 rtkpp-0.8.5/rtkpp/inst/projects/Algebra/include/STK_SymEigen.h | 8 rtkpp-0.8.5/rtkpp/inst/projects/Algebra/include/STK_lapack_Qr.h | 2 rtkpp-0.8.5/rtkpp/inst/projects/Algebra/include/STK_lapack_SymEigen.h | 4 rtkpp-0.8.5/rtkpp/inst/projects/Algebra/src/STK_Qr.cpp | 3 rtkpp-0.8.5/rtkpp/inst/projects/Algebra/src/STK_Svd.cpp | 14 rtkpp-0.8.5/rtkpp/inst/projects/Algebra/src/STK_SymEigen.cpp | 6 rtkpp-0.8.5/rtkpp/inst/projects/Algebra/src/makefile | 2 rtkpp-0.8.5/rtkpp/inst/projects/Analysis/include/STK_Funct_Util.h |only rtkpp-0.8.5/rtkpp/inst/projects/Analysis/include/STK_Funct_raw.h | 2 rtkpp-0.8.5/rtkpp/inst/projects/Analysis/include/STK_IFunction.h | 2 rtkpp-0.8.5/rtkpp/inst/projects/Analysis/src/STK_Funct_betaRatio.cpp | 6 rtkpp-0.8.5/rtkpp/inst/projects/Analysis/src/STK_Funct_dev0.cpp | 2 rtkpp-0.8.5/rtkpp/inst/projects/Analysis/src/STK_Funct_expm1.cpp | 2 rtkpp-0.8.5/rtkpp/inst/projects/Analysis/src/STK_Funct_g0.cpp | 2 rtkpp-0.8.5/rtkpp/inst/projects/Analysis/src/STK_Funct_gamma.cpp | 10 rtkpp-0.8.5/rtkpp/inst/projects/Analysis/src/STK_Funct_gammaRatio.cpp | 4 rtkpp-0.8.5/rtkpp/inst/projects/Analysis/src/STK_Funct_log1p.cpp | 2 rtkpp-0.8.5/rtkpp/inst/projects/Analysis/src/STK_Funct_poisson_raw.cpp | 2 rtkpp-0.8.5/rtkpp/inst/projects/Analysis/src/STK_Funct_psi_raw.cpp | 2 rtkpp-0.8.5/rtkpp/inst/projects/Analysis/src/makefile | 2 rtkpp-0.8.5/rtkpp/inst/projects/Arrays/include/STK_AllocatorBase.h | 11 rtkpp-0.8.5/rtkpp/inst/projects/Arrays/include/STK_Array1D.h | 6 rtkpp-0.8.5/rtkpp/inst/projects/Arrays/include/STK_Array2D.h | 62 rtkpp-0.8.5/rtkpp/inst/projects/Arrays/include/STK_Array2DDiagonal.h | 28 rtkpp-0.8.5/rtkpp/inst/projects/Arrays/include/STK_Array2DLowerTriangular.h | 29 rtkpp-0.8.5/rtkpp/inst/projects/Arrays/include/STK_Array2DPoint.h | 31 rtkpp-0.8.5/rtkpp/inst/projects/Arrays/include/STK_Array2DSquare.h | 32 rtkpp-0.8.5/rtkpp/inst/projects/Arrays/include/STK_Array2DUpperTriangular.h | 34 rtkpp-0.8.5/rtkpp/inst/projects/Arrays/include/STK_Array2DVector.h | 27 rtkpp-0.8.5/rtkpp/inst/projects/Arrays/include/STK_Array2D_Functors.h | 65 rtkpp-0.8.5/rtkpp/inst/projects/Arrays/include/STK_ArrayBase.h | 143 - rtkpp-0.8.5/rtkpp/inst/projects/Arrays/include/STK_ArrayBaseApplier.h | 86 rtkpp-0.8.5/rtkpp/inst/projects/Arrays/include/STK_ArrayBaseAssign.h | 68 rtkpp-0.8.5/rtkpp/inst/projects/Arrays/include/STK_ArrayBaseInitializer.h | 25 rtkpp-0.8.5/rtkpp/inst/projects/Arrays/include/STK_Arrays_Util.h | 2 rtkpp-0.8.5/rtkpp/inst/projects/Arrays/include/STK_CAllocator.h | 1153 ++++++---- rtkpp-0.8.5/rtkpp/inst/projects/Arrays/include/STK_CArray.h | 120 - rtkpp-0.8.5/rtkpp/inst/projects/Arrays/include/STK_CArrayNumber.h | 49 rtkpp-0.8.5/rtkpp/inst/projects/Arrays/include/STK_CArrayPoint.h | 68 rtkpp-0.8.5/rtkpp/inst/projects/Arrays/include/STK_CArraySquare.h | 78 rtkpp-0.8.5/rtkpp/inst/projects/Arrays/include/STK_CArrayVector.h | 56 rtkpp-0.8.5/rtkpp/inst/projects/Arrays/include/STK_Const_Arrays.h | 107 rtkpp-0.8.5/rtkpp/inst/projects/Arrays/include/STK_ExprBase.h | 174 + rtkpp-0.8.5/rtkpp/inst/projects/Arrays/include/STK_ExprBaseFunctors.h | 213 + rtkpp-0.8.5/rtkpp/inst/projects/Arrays/include/STK_ExprBaseProduct.h | 22 rtkpp-0.8.5/rtkpp/inst/projects/Arrays/include/STK_ExprBaseVisitor.h | 246 +- rtkpp-0.8.5/rtkpp/inst/projects/Arrays/include/STK_IArray2D.h | 561 +++- rtkpp-0.8.5/rtkpp/inst/projects/Arrays/include/STK_IArray2DBase.h | 408 ++- rtkpp-0.8.5/rtkpp/inst/projects/Arrays/include/STK_ICAllocator.h |only rtkpp-0.8.5/rtkpp/inst/projects/Arrays/include/STK_ICArray.h | 101 rtkpp-0.8.5/rtkpp/inst/projects/Arrays/include/STK_ITContainer.h |only rtkpp-0.8.5/rtkpp/inst/projects/Arrays/include/operators/STK_BinaryOperators.h | 88 rtkpp-0.8.5/rtkpp/inst/projects/Arrays/include/operators/STK_DiagOperator.h | 37 rtkpp-0.8.5/rtkpp/inst/projects/Arrays/include/operators/STK_DotOperators.h | 10 rtkpp-0.8.5/rtkpp/inst/projects/Arrays/include/operators/STK_SlicingOperators.h |only rtkpp-0.8.5/rtkpp/inst/projects/Arrays/include/operators/STK_TransposeOperator.h | 10 rtkpp-0.8.5/rtkpp/inst/projects/Arrays/include/operators/STK_UnaryOperators.h | 11 rtkpp-0.8.5/rtkpp/inst/projects/Arrays/include/products/STK_ArrayByArrayProduct.h |only rtkpp-0.8.5/rtkpp/inst/projects/Arrays/include/products/STK_ArrayByVectorProduct.h |only rtkpp-0.8.5/rtkpp/inst/projects/Arrays/include/products/STK_ProductImpl.h | 127 - rtkpp-0.8.5/rtkpp/inst/projects/Arrays/include/products/STK_ProductOperators.h | 245 +- rtkpp-0.8.5/rtkpp/inst/projects/Arrays/include/visitors/STK_SlicingVisitors.h |only rtkpp-0.8.5/rtkpp/inst/projects/Arrays/include/visitors/STK_VisitorSelector.h | 246 -- rtkpp-0.8.5/rtkpp/inst/projects/Arrays/include/visitors/STK_Visitors.h | 210 + rtkpp-0.8.5/rtkpp/inst/projects/Arrays/include/visitors/STK_VisitorsImpl.h | 469 ++-- rtkpp-0.8.5/rtkpp/inst/projects/Arrays/src/STK_Arrays_Util.cpp | 8 rtkpp-0.8.5/rtkpp/inst/projects/Arrays/src/makefile | 2 rtkpp-0.8.5/rtkpp/inst/projects/Arrays/src/makevars.local | 2 rtkpp-0.8.5/rtkpp/inst/projects/Clustering/include/CategoricalMixtureModels/STK_CategoricalBase.h | 32 rtkpp-0.8.5/rtkpp/inst/projects/Clustering/include/CategoricalMixtureModels/STK_CategoricalParameters.h | 102 rtkpp-0.8.5/rtkpp/inst/projects/Clustering/include/CategoricalMixtureModels/STK_Categorical_pjk.h | 26 rtkpp-0.8.5/rtkpp/inst/projects/Clustering/include/CategoricalMixtureModels/STK_Categorical_pk.h | 19 rtkpp-0.8.5/rtkpp/inst/projects/Clustering/include/ExponentialMixtureModels/STK_ExponentialBase.h | 36 rtkpp-0.8.5/rtkpp/inst/projects/Clustering/include/ExponentialMixtureModels/STK_ExponentialParameters.h | 66 rtkpp-0.8.5/rtkpp/inst/projects/Clustering/include/ExponentialMixtureModels/STK_Exponential_bjk.h | 18 rtkpp-0.8.5/rtkpp/inst/projects/Clustering/include/ExponentialMixtureModels/STK_Exponential_bk.h | 17 rtkpp-0.8.5/rtkpp/inst/projects/Clustering/include/GammaMixtureModels/STK_GammaBase.h | 59 rtkpp-0.8.5/rtkpp/inst/projects/Clustering/include/GammaMixtureModels/STK_GammaParameters.h | 595 +++-- rtkpp-0.8.5/rtkpp/inst/projects/Clustering/include/GammaMixtureModels/STK_Gamma_a_bjk.h | 38 rtkpp-0.8.5/rtkpp/inst/projects/Clustering/include/GammaMixtureModels/STK_Gamma_a_bk.h | 42 rtkpp-0.8.5/rtkpp/inst/projects/Clustering/include/GammaMixtureModels/STK_Gamma_aj_bjk.h | 37 rtkpp-0.8.5/rtkpp/inst/projects/Clustering/include/GammaMixtureModels/STK_Gamma_aj_bk.h | 37 rtkpp-0.8.5/rtkpp/inst/projects/Clustering/include/GammaMixtureModels/STK_Gamma_ajk_b.h | 35 rtkpp-0.8.5/rtkpp/inst/projects/Clustering/include/GammaMixtureModels/STK_Gamma_ajk_bj.h | 39 rtkpp-0.8.5/rtkpp/inst/projects/Clustering/include/GammaMixtureModels/STK_Gamma_ajk_bjk.h | 13 rtkpp-0.8.5/rtkpp/inst/projects/Clustering/include/GammaMixtureModels/STK_Gamma_ajk_bk.h | 11 rtkpp-0.8.5/rtkpp/inst/projects/Clustering/include/GammaMixtureModels/STK_Gamma_ak_b.h | 37 rtkpp-0.8.5/rtkpp/inst/projects/Clustering/include/GammaMixtureModels/STK_Gamma_ak_bj.h | 39 rtkpp-0.8.5/rtkpp/inst/projects/Clustering/include/GammaMixtureModels/STK_Gamma_ak_bjk.h | 11 rtkpp-0.8.5/rtkpp/inst/projects/Clustering/include/GammaMixtureModels/STK_Gamma_ak_bk.h | 18 rtkpp-0.8.5/rtkpp/inst/projects/Clustering/include/GaussianMixtureModels/STK_DiagGaussianBase.h | 78 rtkpp-0.8.5/rtkpp/inst/projects/Clustering/include/GaussianMixtureModels/STK_DiagGaussianParameters.h | 153 - rtkpp-0.8.5/rtkpp/inst/projects/Clustering/include/GaussianMixtureModels/STK_Gaussian_s.h | 36 rtkpp-0.8.5/rtkpp/inst/projects/Clustering/include/GaussianMixtureModels/STK_Gaussian_sj.h | 34 rtkpp-0.8.5/rtkpp/inst/projects/Clustering/include/GaussianMixtureModels/STK_Gaussian_sjk.h | 22 rtkpp-0.8.5/rtkpp/inst/projects/Clustering/include/GaussianMixtureModels/STK_Gaussian_sk.h | 16 rtkpp-0.8.5/rtkpp/inst/projects/Clustering/include/MixturesBridges/STK_IMixtureBridge.h | 33 rtkpp-0.8.5/rtkpp/inst/projects/Clustering/include/MixturesBridges/STK_MixtureBridge.h | 91 rtkpp-0.8.5/rtkpp/inst/projects/Clustering/include/PoissonMixtureModels |only rtkpp-0.8.5/rtkpp/inst/projects/Clustering/include/STK_Clust_Util.h | 13 rtkpp-0.8.5/rtkpp/inst/projects/Clustering/include/STK_IMixture.h | 95 rtkpp-0.8.5/rtkpp/inst/projects/Clustering/include/STK_IMixtureComposer.h | 61 rtkpp-0.8.5/rtkpp/inst/projects/Clustering/include/STK_IMixtureManager.h | 5 rtkpp-0.8.5/rtkpp/inst/projects/Clustering/include/STK_IMixtureModel.h | 113 rtkpp-0.8.5/rtkpp/inst/projects/Clustering/include/STK_IMixtureModelBase.h | 37 rtkpp-0.8.5/rtkpp/inst/projects/Clustering/include/STK_MixtureComposer.h | 32 rtkpp-0.8.5/rtkpp/inst/projects/Clustering/include/STK_MixtureManager.h | 170 + rtkpp-0.8.5/rtkpp/inst/projects/Clustering/include/STK_MixtureParamStat.h |only rtkpp-0.8.5/rtkpp/inst/projects/Clustering/src/STK_Clust_Util.cpp | 34 rtkpp-0.8.5/rtkpp/inst/projects/Clustering/src/STK_IMixture.cpp | 28 rtkpp-0.8.5/rtkpp/inst/projects/Clustering/src/STK_IMixtureComposer.cpp | 111 rtkpp-0.8.5/rtkpp/inst/projects/Clustering/src/STK_IMixtureData.cpp |only rtkpp-0.8.5/rtkpp/inst/projects/Clustering/src/STK_IMixtureModelBase.cpp | 34 rtkpp-0.8.5/rtkpp/inst/projects/Clustering/src/STK_MixtureAlgo.cpp | 105 rtkpp-0.8.5/rtkpp/inst/projects/Clustering/src/STK_MixtureComposer.cpp | 28 rtkpp-0.8.5/rtkpp/inst/projects/Clustering/src/STK_MixtureFacade.cpp | 8 rtkpp-0.8.5/rtkpp/inst/projects/Clustering/src/STK_MixtureInit.cpp | 60 rtkpp-0.8.5/rtkpp/inst/projects/Clustering/src/STK_MixtureStrategy.cpp | 62 rtkpp-0.8.5/rtkpp/inst/projects/Clustering/src/makefile | 2 rtkpp-0.8.5/rtkpp/inst/projects/Clustering/src/makevars.local | 1 rtkpp-0.8.5/rtkpp/inst/projects/DManager/include/STK_CsvToArray.h | 2 rtkpp-0.8.5/rtkpp/inst/projects/DManager/include/STK_DataFrame.h | 16 rtkpp-0.8.5/rtkpp/inst/projects/DManager/include/STK_ExportToCsv.h | 2 rtkpp-0.8.5/rtkpp/inst/projects/DManager/include/STK_IVariable.h | 2 rtkpp-0.8.5/rtkpp/inst/projects/DManager/include/STK_Variable.h | 44 rtkpp-0.8.5/rtkpp/inst/projects/DManager/src/STK_DataFrame.cpp | 28 rtkpp-0.8.5/rtkpp/inst/projects/DManager/src/makefile | 2 rtkpp-0.8.5/rtkpp/inst/projects/Reduct/include/STK_ILinearReduct.h | 12 rtkpp-0.8.5/rtkpp/inst/projects/Reduct/include/STK_IReduct.h | 14 rtkpp-0.8.5/rtkpp/inst/projects/Reduct/include/STK_LocalVariance.h | 20 rtkpp-0.8.5/rtkpp/inst/projects/Reduct/include/STK_ProjectedVariance.h | 8 rtkpp-0.8.5/rtkpp/inst/projects/Reduct/src/STK_ILinearReduct.cpp | 6 rtkpp-0.8.5/rtkpp/inst/projects/Reduct/src/STK_IReduct.cpp | 4 rtkpp-0.8.5/rtkpp/inst/projects/Reduct/src/STK_LocalVariance.cpp | 21 rtkpp-0.8.5/rtkpp/inst/projects/Reduct/src/STK_ProjectedVariance.cpp | 4 rtkpp-0.8.5/rtkpp/inst/projects/Reduct/src/makefile | 2 rtkpp-0.8.5/rtkpp/inst/projects/Regress/include/STK_AdditiveBSplineCoefficients.h | 12 rtkpp-0.8.5/rtkpp/inst/projects/Regress/include/STK_AdditiveBSplineRegression.h | 22 rtkpp-0.8.5/rtkpp/inst/projects/Regress/include/STK_BSplineCoefficients.h | 364 +++ rtkpp-0.8.5/rtkpp/inst/projects/Regress/include/STK_BSplineRegression.h | 34 rtkpp-0.8.5/rtkpp/inst/projects/Regress/include/STK_IRegression.h | 81 rtkpp-0.8.5/rtkpp/inst/projects/Regress/include/STK_MultidimRegression.h | 14 rtkpp-0.8.5/rtkpp/inst/projects/Regress/src/STK_AdditiveBSplineRegression.cpp | 27 rtkpp-0.8.5/rtkpp/inst/projects/Regress/src/STK_BSplineRegression.cpp | 22 rtkpp-0.8.5/rtkpp/inst/projects/Regress/src/STK_MultidimRegression.cpp | 27 rtkpp-0.8.5/rtkpp/inst/projects/Regress/src/makefile | 2 rtkpp-0.8.5/rtkpp/inst/projects/Rtkpp/include/Rcpp_as.h | 6 rtkpp-0.8.5/rtkpp/inst/projects/Rtkpp/include/Rcpp_wrap.h | 54 rtkpp-0.8.5/rtkpp/inst/projects/Rtkpp/include/STK_ClusterLauncher.h | 2 rtkpp-0.8.5/rtkpp/inst/projects/Rtkpp/include/STK_RDataHandler.h | 19 rtkpp-0.8.5/rtkpp/inst/projects/Rtkpp/include/STK_RMatrix.h |only rtkpp-0.8.5/rtkpp/inst/projects/Rtkpp/include/STK_RVector.h |only rtkpp-0.8.5/rtkpp/inst/projects/Rtkpp/include/STK_wrap.h |only rtkpp-0.8.5/rtkpp/inst/projects/STKernel/include/STK_Arithmetic.h | 25 rtkpp-0.8.5/rtkpp/inst/projects/STKernel/include/STK_Constants.h | 2 rtkpp-0.8.5/rtkpp/inst/projects/STKernel/include/STK_Functors.h | 2 rtkpp-0.8.5/rtkpp/inst/projects/STKernel/include/STK_Range.h | 8 rtkpp-0.8.5/rtkpp/inst/projects/STKernel/src/STK_Real.cpp | 2 rtkpp-0.8.5/rtkpp/inst/projects/STKernel/src/makefile | 2 rtkpp-0.8.5/rtkpp/inst/projects/STatistiK/include/MersenneTwister.h | 23 rtkpp-0.8.5/rtkpp/inst/projects/STatistiK/include/STK_Law_Bernoulli.h | 1 rtkpp-0.8.5/rtkpp/inst/projects/STatistiK/include/STK_Law_Beta.h | 12 rtkpp-0.8.5/rtkpp/inst/projects/STatistiK/include/STK_Law_Categorical.h | 2 rtkpp-0.8.5/rtkpp/inst/projects/STatistiK/include/STK_Law_Cauchy.h | 1 rtkpp-0.8.5/rtkpp/inst/projects/STatistiK/include/STK_Law_Gamma.h | 22 rtkpp-0.8.5/rtkpp/inst/projects/STatistiK/include/STK_Law_IUnivLaw.h | 13 rtkpp-0.8.5/rtkpp/inst/projects/STatistiK/include/STK_Law_MultiNormal.h | 18 rtkpp-0.8.5/rtkpp/inst/projects/STatistiK/include/STK_Law_Normal.h | 1 rtkpp-0.8.5/rtkpp/inst/projects/STatistiK/include/STK_Law_Poisson.h |only rtkpp-0.8.5/rtkpp/inst/projects/STatistiK/include/STK_RandBase.h | 120 - rtkpp-0.8.5/rtkpp/inst/projects/STatistiK/include/STK_Stat_Functors.h | 400 +-- rtkpp-0.8.5/rtkpp/inst/projects/STatistiK/include/STK_Stat_MultivariateReal.h | 35 rtkpp-0.8.5/rtkpp/inst/projects/STatistiK/include/STK_Stat_UnivariateReal.h | 18 rtkpp-0.8.5/rtkpp/inst/projects/STatistiK/src/STK_Law_Beta.cpp | 26 rtkpp-0.8.5/rtkpp/inst/projects/STatistiK/src/STK_Law_Categorical.cpp | 13 rtkpp-0.8.5/rtkpp/inst/projects/STatistiK/src/STK_Law_Cauchy.cpp | 12 rtkpp-0.8.5/rtkpp/inst/projects/STatistiK/src/STK_Law_Exponential.cpp | 12 rtkpp-0.8.5/rtkpp/inst/projects/STatistiK/src/STK_Law_Gamma.cpp | 28 rtkpp-0.8.5/rtkpp/inst/projects/STatistiK/src/STK_Law_Normal.cpp | 98 rtkpp-0.8.5/rtkpp/inst/projects/STatistiK/src/STK_Law_Poisson.cpp |only rtkpp-0.8.5/rtkpp/inst/projects/STatistiK/src/STK_Law_Uniform.cpp | 15 rtkpp-0.8.5/rtkpp/inst/projects/STatistiK/src/makefile | 2 rtkpp-0.8.5/rtkpp/inst/projects/Sdk/include/STK_MetaTemplate.h | 67 rtkpp-0.8.5/rtkpp/inst/projects/Sdk/include/STK_StaticAssert.h | 7 rtkpp-0.8.5/rtkpp/inst/projects/Sdk/src/makefile | 2 rtkpp-0.8.5/rtkpp/inst/projects/StatModels/include/STK_Gaussian2BlocksModel.h | 2 rtkpp-0.8.5/rtkpp/inst/projects/StatModels/include/STK_GaussianModel.h | 14 rtkpp-0.8.5/rtkpp/inst/projects/StatModels/include/STK_IGaussianModel.h | 2 rtkpp-0.8.5/rtkpp/inst/projects/StatModels/include/STK_IMultiParameters.h | 5 rtkpp-0.8.5/rtkpp/inst/projects/StatModels/include/STK_IMultiStatModel.h | 4 rtkpp-0.8.5/rtkpp/inst/projects/StatModels/include/STK_IStatModelBase.h | 7 rtkpp-0.8.5/rtkpp/inst/projects/StatModels/include/STK_JointBernoulliModel.h | 9 rtkpp-0.8.5/rtkpp/inst/projects/StatModels/include/STK_JointGammaParameters.h | 19 rtkpp-0.8.5/rtkpp/inst/projects/StatModels/include/STK_JointGaussianModel.h | 11 rtkpp-0.8.5/rtkpp/inst/projects/StatModels/src/STK_Gaussian2BlocksModel.cpp | 16 rtkpp-0.8.5/rtkpp/inst/projects/StatModels/src/STK_GaussianModel.cpp | 10 rtkpp-0.8.5/rtkpp/inst/projects/StatModels/src/STK_IGaussianModel.cpp | 2 rtkpp-0.8.5/rtkpp/inst/projects/StatModels/src/makefile | 2 rtkpp-0.8.5/rtkpp/inst/unitTests/runit.wrap.R | 6 rtkpp-0.8.5/rtkpp/man/ClusterInit-class.Rd | 4 rtkpp-0.8.5/rtkpp/man/ClusterPoisson-class.Rd |only rtkpp-0.8.5/rtkpp/man/DebTrivedi.Rd |only rtkpp-0.8.5/rtkpp/man/IClusterComponent-class.Rd | 11 rtkpp-0.8.5/rtkpp/man/clusterDiagGaussianNames.Rd | 7 rtkpp-0.8.5/rtkpp/man/clusterGamma.Rd | 2 rtkpp-0.8.5/rtkpp/man/clusterInit.Rd | 10 rtkpp-0.8.5/rtkpp/man/clusterPoisson.Rd |only rtkpp-0.8.5/rtkpp/man/clusterPoissonNames.Rd |only rtkpp-0.8.5/rtkpp/man/clusterStrategy.Rd | 4 rtkpp-0.8.5/rtkpp/man/extract-methods.Rd | 3 rtkpp-0.8.5/rtkpp/man/initialize-methods.Rd | 18 rtkpp-0.8.5/rtkpp/man/missingValues-methods.Rd | 6 rtkpp-0.8.5/rtkpp/man/plot-ClusterGamma-method.Rd | 3 rtkpp-0.8.5/rtkpp/man/plot-ClusterPoisson-method.Rd |only rtkpp-0.8.5/rtkpp/man/print-methods.Rd | 6 rtkpp-0.8.5/rtkpp/man/rtkppFlags.Rd | 5 rtkpp-0.8.5/rtkpp/man/show-methods.Rd | 8 rtkpp-0.8.5/rtkpp/man/summary-methods.Rd | 3 rtkpp-0.8.5/rtkpp/src/Makevars | 12 rtkpp-0.8.5/rtkpp/src/STK_ClusterFacade.cpp | 4 rtkpp-0.8.5/rtkpp/src/STK_ClusterLauncher.cpp | 50 rtkpp-0.8.5/rtkpp/src/STK_RDataHandler.cpp | 4 rtkpp-0.8.5/rtkpp/tests/clusterGammaLikelihood.R | 4 rtkpp-0.8.5/rtkpp/vignettes |only 284 files changed, 6964 insertions(+), 4795 deletions(-)
Title: Forecastable Component Analysis
Description: Forecastable Component Analysis (ForeCA) is a novel dimension
reduction (DR) technique for temporally dependent signals. Contrary to
other popular DR methods, such as PCA or ICA, ForeCA takes time dependency
explicitly into account and searches for the most ''forecastable'' signal.
The measure of forecastability is based on the Shannon entropy of the
spectral density of the transformed signal. This R package provides the
main algorithms and auxiliary function (summary, plotting, etc.) to apply
ForeCA to multivariate time series data.
Author: Georg M. Goerg
Maintainer: Georg M. Goerg
Diff between ForeCA versions 0.1 dated 2014-03-02 and 0.2.0 dated 2015-02-20
ForeCA-0.1/ForeCA/R/foreca.EM.R |only ForeCA-0.1/ForeCA/man/foreca.EM.Rd |only ForeCA-0.2.0/ForeCA/DESCRIPTION | 28 ForeCA-0.2.0/ForeCA/MD5 | 94 +- ForeCA-0.2.0/ForeCA/NAMESPACE | 27 ForeCA-0.2.0/ForeCA/NEWS | 82 ++ ForeCA-0.2.0/ForeCA/R/ForeCA-package.R | 66 + ForeCA-0.2.0/ForeCA/R/Omega.R | 196 ++--- ForeCA-0.2.0/ForeCA/R/SDF2mvspectrum.R | 75 +- ForeCA-0.2.0/ForeCA/R/common-arguments.R |only ForeCA-0.2.0/ForeCA/R/complete_controls.R |only ForeCA-0.2.0/ForeCA/R/continuous_entropy.R | 146 ++-- ForeCA-0.2.0/ForeCA/R/discrete_entropy.R | 158 ++-- ForeCA-0.2.0/ForeCA/R/foreca-utils.R | 240 +++---- ForeCA-0.2.0/ForeCA/R/foreca.EM-aux.R | 399 ++++++----- ForeCA-0.2.0/ForeCA/R/foreca.EM.one_weightvector.R |only ForeCA-0.2.0/ForeCA/R/foreca.R | 503 ++++++++++++++- ForeCA-0.2.0/ForeCA/R/foreca.one_weightvector-utils.R |only ForeCA-0.2.0/ForeCA/R/initialize_weightvector.R | 163 ++-- ForeCA-0.2.0/ForeCA/R/mvspec2mvspectrum.R | 56 - ForeCA-0.2.0/ForeCA/R/mvspectrum.R | 383 ++++++++--- ForeCA-0.2.0/ForeCA/R/mvspectrum2wcov.R | 240 ++++--- ForeCA-0.2.0/ForeCA/R/quadratic_form.R | 86 +- ForeCA-0.2.0/ForeCA/R/sfa.R |only ForeCA-0.2.0/ForeCA/R/spectral_entropy.R | 254 +++---- ForeCA-0.2.0/ForeCA/R/univariate_spectrum-functions.R |only ForeCA-0.2.0/ForeCA/R/whiten.R | 274 ++++++-- ForeCA-0.2.0/ForeCA/R/zzz.R |only ForeCA-0.2.0/ForeCA/man/ForeCA-package.Rd | 43 - ForeCA-0.2.0/ForeCA/man/Omega.Rd | 125 +-- ForeCA-0.2.0/ForeCA/man/common-arguments.Rd |only ForeCA-0.2.0/ForeCA/man/complete-controls.Rd |only ForeCA-0.2.0/ForeCA/man/continuous_entropy.Rd | 60 - ForeCA-0.2.0/ForeCA/man/discrete_entropy.Rd | 95 +- ForeCA-0.2.0/ForeCA/man/foreca-utils.Rd | 66 - ForeCA-0.2.0/ForeCA/man/foreca.EM-aux.Rd | 160 ++-- ForeCA-0.2.0/ForeCA/man/foreca.EM.one_weightvector.Rd |only ForeCA-0.2.0/ForeCA/man/foreca.Rd | 175 ++++- ForeCA-0.2.0/ForeCA/man/foreca.one_weightvector-utils.Rd |only ForeCA-0.2.0/ForeCA/man/initialize_weightvector.Rd | 116 +-- ForeCA-0.2.0/ForeCA/man/mvspectrum.Rd | 257 +++++-- ForeCA-0.2.0/ForeCA/man/mvspectrum2wcov.Rd | 98 ++ ForeCA-0.2.0/ForeCA/man/quadratic_form.Rd | 26 ForeCA-0.2.0/ForeCA/man/sfa.Rd |only ForeCA-0.2.0/ForeCA/man/spectral_entropy.Rd | 118 +-- ForeCA-0.2.0/ForeCA/man/whiten.Rd | 99 ++ ForeCA-0.2.0/ForeCA/tests |only 47 files changed, 3116 insertions(+), 1792 deletions(-)
Title: High-Speed Processing of VCF, FASTA and Alignment Data
Description: Provides very fast access to whole genome, population scale variation data
from VCF files and sequence data from FASTA-formatted files.
It also reads in alignments from FASTA, Phylip, MAF and other file formats.
Provides easy-to-use interfaces to genome annotation from UCSC and Bioconductor and gene ontology data
from AmiGO and is capable to read, modify and write PLINK .PED-format pedigree files.
Author: Ulrich Wittelsbuerger [aut, cre], Heng Li [ctb], Bob Handsaker [ctb]
Maintainer: Ulrich Wittelsbuerger
Diff between WhopGenome versions 0.9.1 dated 2015-02-19 and 0.9.2 dated 2015-02-20
DESCRIPTION | 7 + MD5 | 7 + inst/CITATION |only src/Makevars | 16 ---- src/Makevars.win | 212 +++++++++++++++++++++++++++---------------------------- 5 files changed, 116 insertions(+), 126 deletions(-)
Title: S3 Methods Simplified
Description: Methods that simplify the setup of S3 generic functions and S3 methods. Major effort has been made in making definition of methods as simple as possible with a minimum of maintenance for package developers. For example, generic functions are created automatically, if missing, and naming conflict are automatically solved, if possible. The method setMethodS3() is a good start for those who in the future may want to migrate to S4. This is a cross-platform package implemented in pure R that generates standard S3 methods.
Author: Henrik Bengtsson [aut, cre, cph]
Maintainer: Henrik Bengtsson
Diff between R.methodsS3 versions 1.6.1 dated 2014-01-05 and 1.7.0 dated 2015-02-20
R.methodsS3-1.6.1/R.methodsS3/inst/NEWS |only R.methodsS3-1.7.0/R.methodsS3/DESCRIPTION | 10 ++--- R.methodsS3-1.7.0/R.methodsS3/MD5 | 27 ++++++++++------ R.methodsS3-1.7.0/R.methodsS3/NEWS |only R.methodsS3-1.7.0/R.methodsS3/R/000.R | 10 +++++ R.methodsS3-1.7.0/R.methodsS3/R/010.setGenericS3.R | 12 +++---- R.methodsS3-1.7.0/R.methodsS3/R/030.setMethodS3.R | 7 ++-- R.methodsS3-1.7.0/R.methodsS3/R/findDispatchMethodsS3.R | 27 ++++++++++++++++ R.methodsS3-1.7.0/R.methodsS3/R/isGenericS3.R | 15 +++++++- R.methodsS3-1.7.0/R.methodsS3/R/pkgStartupMessage.R | 1 R.methodsS3-1.7.0/R.methodsS3/R/zzz.R | 22 +++++-------- R.methodsS3-1.7.0/R.methodsS3/tests |only 12 files changed, 91 insertions(+), 40 deletions(-)
Title: Multi-Class Sparse Discriminant Analysis
Description: Efficient procedures for computing a new Multi-Class Sparse Discriminant Analysis method that estimates all discriminant directions simultaneously.
Author: Qing Mai
Maintainer: Yi Yang
Diff between msda versions 1.0.1 dated 2014-10-02 and 1.0.2 dated 2015-02-20
ChangeLog | 5 + DESCRIPTION | 10 +-- MD5 | 28 +++++----- NAMESPACE | 1 R/cv.msda.R | 19 +++--- R/msda.R | 6 +- R/plot.msda.R |only R/predict.msda.R | 11 ++-- R/utilities.R | 11 ++-- data/GDS1615.rda |binary man/GDS1615.Rd | 56 ++++++++++---------- man/cv.msda.Rd | 142 ++++++++++++++++++++++++++-------------------------- man/msda.Rd | 16 +++-- man/plot.msda.Rd |only man/predict.msda.Rd | 84 +++++++++++++++--------------- src/msda_new.f90 | 11 ++-- 16 files changed, 216 insertions(+), 184 deletions(-)
Title: Support Functions and Datasets for Venables and Ripley's MASS
Description: Functions and datasets to support Venables and Ripley,
'Modern Applied Statistics with S' (4th edition, 2002).
Author: Brian Ripley [aut, cre, cph],
Bill Venables [ctb],
Douglas M. Bates [ctb],
Kurt Hornik [trl] (partial port ca 1998),
Albrecht Gebhardt [trl] (partial port ca 1998),
David Firth [ctb]
Maintainer: Brian Ripley
Diff between MASS versions 7.3-37 dated 2015-01-10 and 7.3-39 dated 2015-02-20
DESCRIPTION | 12 ++++++------ MD5 | 32 ++++++++++++++++---------------- NAMESPACE | 5 +++-- R/lda.R | 3 ++- R/loglm.R | 2 +- R/lqs.R | 2 +- R/mvrnorm.R | 6 +++--- R/neg.bin.R | 2 +- R/negbin.R | 2 +- inst/NEWS | 3 ++- man/OME.Rd | 2 +- man/corresp.Rd | 2 +- man/denumerate.Rd | 2 +- man/geyser.Rd | 3 +++ man/mvrnorm.Rd | 9 ++++----- man/npr1.Rd | 2 +- man/summary.rlm.Rd | 2 +- 17 files changed, 48 insertions(+), 43 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2015-02-17 0.3
2015-01-29 0.2
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2015-02-11 1.0
Title: R/KEA Interface
Description: An R interface to KEA (Version 5.0).
KEA (for Keyphrase Extraction Algorithm) allows for extracting
keyphrases from text documents. It can be either used for free
indexing or for indexing with a controlled vocabulary. For more
information see
Author: Ingo Feinerer [aut],
Kurt Hornik [aut, cre],
Eibe Frank [ctb, cph] (KEA Java library),
Olena Medelyan [ctb, cph] (KEA Java library),
The Apache Software Foundation [ctb, cph] (Apache Commons Logging and
Apache Jena Java libraries),
International Business Machines Corporation and others [ctb, cph]
(International Components for Unicode for Java (ICU4J)),
Martin Porter [ctb, cph] (Snowball base),
Richard Boulton [ctb, cph] (Snowball Java library),
University of Waikato [ctb, cph] (Weka Java library)
Maintainer: Kurt Hornik
Diff between RKEA versions 0.0-4 dated 2014-06-12 and 0.0-5 dated 2015-02-20
DESCRIPTION | 33 ++++++++++++++++++++++++++------- MD5 | 11 ++++++----- R/kea.R | 28 ++++++++++++++++++++++++++++ build/vignette.rds |binary inst/doc/kea.pdf |binary java |only man/createModel.Rd | 23 +++++++++++++++++------ 7 files changed, 77 insertions(+), 18 deletions(-)
Title: Linear and Nonlinear Mixed Effects Models
Description: Fit and compare Gaussian linear and nonlinear mixed-effects models.
Author: José Pinheiro [aut] (S version),
Douglas Bates [aut] (up to 2007),
Saikat DebRoy [ctb] (up to 2002),
Deepayan Sarkar [ctb] (up to 2005),
EISPACK authors [ctb] (src/rs.f),
R-core [aut, cre]
Maintainer: R-core
Diff between nlme versions 3.1-119 dated 2015-01-10 and 3.1-120 dated 2015-02-20
ChangeLog | 22 ++++++++- DESCRIPTION | 10 ++-- MD5 | 80 +++++++++++++++++----------------- NAMESPACE | 3 - R/VarCorr.R | 4 - R/corStruct.R | 1 R/groupedData.R | 6 -- R/lmList.R | 4 - R/lme.R | 5 -- R/modelStruct.R | 5 -- R/newFunc.R | 5 -- R/newGenerics.R | 5 -- R/newMethods.R | 4 - R/nlsList.R | 4 - R/pdMat.R | 6 -- R/reStruct.R | 15 ------ inst/po/de/LC_MESSAGES/R-nlme.mo |binary inst/po/de/LC_MESSAGES/nlme.mo |binary inst/po/en@quot/LC_MESSAGES/R-nlme.mo |binary inst/po/en@quot/LC_MESSAGES/nlme.mo |binary inst/po/fr/LC_MESSAGES/nlme.mo |binary inst/po/ko/LC_MESSAGES/nlme.mo |binary inst/po/pl/LC_MESSAGES/nlme.mo |binary inst/scripts/ch01.R | 2 inst/scripts/ch02.R | 2 inst/scripts/ch03.R | 2 inst/scripts/ch04.R | 2 inst/scripts/ch05.R | 2 inst/scripts/ch06.R | 2 inst/scripts/ch08.R | 2 man/bdf.Rd | 2 po/R-de.po | 27 ++++++++--- po/R-nlme.pot | 4 - po/de.po | 22 ++++----- po/fr.po | 22 ++++----- po/ko.po | 22 ++++----- po/nlme.pot | 24 +++++----- po/pl.po | 22 ++++----- tests/nlme.R | 1 tests/nlme.Rout.save | 2 tests/nlme2.R | 2 41 files changed, 157 insertions(+), 186 deletions(-)
Title: Read Data Stored by Minitab, S, SAS, SPSS, Stata, Systat, Weka,
dBase, ...
Description: Functions for reading and writing data stored by some versions of
Epi Info, Minitab, S, SAS, SPSS, Stata, Systat and Weka
and for reading and writing some dBase files.
Author: R Core Team [aut, cph, cre],
Roger Bivand [ctb, cph],
Vincent J. Carey [ctb, cph],
Saikat DebRoy [ctb, cph],
Stephen Eglen [ctb, cph],
Rajarshi Guha [ctb, cph],
Nicholas Lewin-Koh [ctb, cph],
Mark Myatt [ctb, cph],
Ben Pfaff [ctb],
Brian Quistorff [ctb],
Frank Warmerdam [ctb, cph],
Stephen Weigand [ctb, cph],
Free Software Foundation, Inc. [cph]
Maintainer: R Core Team
Diff between foreign versions 0.8-62 dated 2015-01-07 and 0.8-63 dated 2015-02-20
ChangeLog | 15 +++++++++++++++ DESCRIPTION | 8 ++++---- MD5 | 22 +++++++++++----------- R/spss.R | 9 +++++---- R/writeForeignSAS.R | 5 +++-- man/lookup.xport.Rd | 2 +- man/read.arff.Rd | 2 +- man/read.dta.Rd | 2 ++ man/read.spss.Rd | 38 ++++++++++++++++++++------------------ man/read.xport.Rd | 2 +- man/write.arff.Rd | 2 +- src/stataread.c | 9 +++++---- 12 files changed, 69 insertions(+), 47 deletions(-)
Title: Tools for Partial Least Squares Path Modeling (PLS-PM)
Description: plspm contains a set of functions for performing Partial Least
Squares Path Modeling (PLS-PM) analysis for both metric and non-metric
data, as well as REBUS analysis.
Author: Gaston Sanchez [aut, cre],
Laura Trinchera [aut],
Giorgio Russolillo [aut]
Maintainer: ORPHANED
Diff between plspm versions 0.4.1 dated 2013-12-08 and 0.4.2 dated 2015-02-20
DESCRIPTION | 11 +++++++---- MD5 | 6 +++--- NAMESPACE | 1 + build/vignette.rds |binary 4 files changed, 11 insertions(+), 7 deletions(-)
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