Title: Precision-Recall and ROC Curves for Weighted and Unweighted Data
Diff between PRROC versions 1.0 dated 2014-12-16 and 1.1 dated 2015-02-25
Description: Computes the areas under the precision-recall (PR) and ROC curve for weighted (e.g., soft-labeled) and unweighted data. In contrast to other implementations, the interpolation between points of the PR curve is done by a non-linear piecewise function. In addition to the areas under the curves, the curves themselves can also be computed and plotted by a specific S3-method.
Author: Jan Grau and Jens Keilwagen
Maintainer: Jan Grau
DESCRIPTION | 9 ++-
MD5 | 21 +++++---
R/PRROC.R | 15 +-----
inst/doc/PRROC.R | 121 +++++++++++++++++++++++++++++++++++++--------------
inst/doc/PRROC.Rnw | 94 ++++++++++++++++++++++++++++++++++++++-
inst/doc/PRROC.pdf |binary
inst/tests |only
man/PRROC-package.Rd | 4 -
man/pr.curve.Rd | 7 +-
man/roc.curve.Rd | 6 --
tests |only
vignettes/PRROC.Rnw | 94 ++++++++++++++++++++++++++++++++++++++-
12 files changed, 300 insertions(+), 71 deletions(-)
Title: Hierarchical Exponential-Family Random Graph Models
Diff between hergm versions 2.1-1 dated 2015-01-11 and 2.2-0 dated 2015-02-25
Description: Estimate and simulate hierarchical exponential-family random graph models with local dependence.
Author: Michael Schweinberger
Maintainer: Michael Schweinberger
DESCRIPTION | 11 +++++------
MD5 | 14 +++++++-------
R/hergm.gof.R | 2 +-
R/hergm.postprocess.R | 24 ++++++++++++++----------
R/hergm.preprocess.R | 9 +++------
R/zzz.R | 1 +
man/hergm.gof.Rd | 14 +++++++++++++-
src/h_ergm.c | 19 +++++++++----------
8 files changed, 53 insertions(+), 41 deletions(-)
Title: General Frailty Models: Shared, Joint and Nested Frailty Models
with Prediction
Diff between frailtypack versions 2.7.2 dated 2014-10-16 and 2.7.4 dated 2015-02-25
Description: Frailtypack fits several classes of frailty models using a penalized likelihood
estimation on the hazard function but also a parametric estimation.
1) A shared frailty model (with gamma or log-normal frailty distribution) and Cox
proportional hazard model. Clustered and recurrent survival times can be studied.
2) Additive frailty models for proportional hazard models with two correlated
random effects (intercept random effect with random slope).
3) Nested frailty models for hierarchically clustered data (with 2 levels of
clustering) by including two iid gamma random effects.
4) Joint frailty models in the context of joint modelling for recurrent events
with terminal event for clustered data or not.
Prediction values are available. Left-truncated (not for Joint model),
right-censored data, interval-censored data (only for Cox proportional hazard
and shared frailty model) and strata are allowed. In each model,
the random effects have a gamma distribution, but you can switch to a log-normal
in shared and joint models. Now, you can also consider time-varying covariates
effects in Cox, shared and joint models. The package includes concordance measures
for Cox proportional hazards models and for shared frailty models.
Author: Virginie Rondeau, Juan R. Gonzalez, Yassin Mazroui, Audrey
Mauguen, Agnieszka Krol-Listwon, Amadou Diakite and Alexandre Laurent
Maintainer: Virginie Rondeau
DESCRIPTION | 8
MD5 | 39 -
NEWS | 10
R/epoce.R | 37 +
R/frailtyPenal.R | 4
R/multivPenal.R | 6
R/plot.predFrailty.R | 8
R/prediction.R | 1291 ++++++++++++++++++++++-------------------
R/print.jointPenal.R | 2
R/print.predFrailty.R | 2
man/SurvIC.Rd | 2
man/prediction.Rd | 15
src/Aparameters.f90 | 3
src/Makevars | 3
src/aaOptim.f90 | 5
src/distance.f90 | 43 -
src/epoce_log.f90 |only
src/frailtypack.f90 | 46 -
src/funcpassplines_intcens.f90 | 10
src/joint.f90 | 1
src/prediction_log.f90 |only
src/prediction_sha_logn.f90 |only
22 files changed, 881 insertions(+), 654 deletions(-)
Title: Modelling Spatial Variation in Disease Risk for Areal Data
Diff between diseasemapping versions 1.1.5 dated 2015-01-15 and 1.1.7 dated 2015-02-25
More information about diseasemapping at CRAN
Description: Formatting of population and case data, calculation of Standardized Incidence Ratios, and fitting the BYM model using INLA.
Author: Patrick Brown
Maintainer: Patrick Brown
diseasemapping-1.1.5/diseasemapping/R/formatPopulation.SpatialPolygonsDataFrame.R |only
diseasemapping-1.1.5/diseasemapping/R/formatPopulation.data.frame.R |only
diseasemapping-1.1.5/diseasemapping/R/formatPopulation.list.R |only
diseasemapping-1.1.5/diseasemapping/R/getSMR.SpatialPolygonsDataFrame.R |only
diseasemapping-1.1.5/diseasemapping/R/getSMR.data.frame.R |only
diseasemapping-1.1.5/diseasemapping/R/getSMR.list.r |only
diseasemapping-1.1.7/diseasemapping/DESCRIPTION | 14 -
diseasemapping-1.1.7/diseasemapping/MD5 | 27 +--
diseasemapping-1.1.7/diseasemapping/NAMESPACE | 19 --
diseasemapping-1.1.7/diseasemapping/R/formatPopulation.R |only
diseasemapping-1.1.7/diseasemapping/R/getBreaks.R | 2
diseasemapping-1.1.7/diseasemapping/R/getSMR.R |only
diseasemapping-1.1.7/diseasemapping/R/mergeBugsData.R | 23 +-
diseasemapping-1.1.7/diseasemapping/man/cancerRates.Rd | 2
diseasemapping-1.1.7/diseasemapping/man/formatPopulation.Rd | 41 ++--
diseasemapping-1.1.7/diseasemapping/man/getSMR.Rd | 87 +++++++---
diseasemapping-1.1.7/diseasemapping/man/kentucky.Rd | 17 +
diseasemapping-1.1.7/diseasemapping/man/mergeBugsData.Rd | 20 +-
diseasemapping-1.1.7/diseasemapping/tests/getSMR.R |only
19 files changed, 156 insertions(+), 96 deletions(-)
Permanent link
Title: Visualization of Regression Models
Diff between visreg versions 2.1-0 dated 2014-11-27 and 2.1-1 dated 2015-02-25
Description: Provides a convenient interface for constructing plots to visualize the fit of regression models arising from a wide variety of models in R (lm, glm, coxph, rlm, gam, locfit, etc.)
Author: Patrick Breheny, Woodrow Burchett
Maintainer: Patrick Breheny
DESCRIPTION | 14 +++++++-------
MD5 | 21 +++++++++++----------
NEWS | 6 ++++++
R/Terms.R | 11 +++++++++--
R/plot.visreg.R | 3 ++-
R/setupX.R | 6 ++++++
R/visreg2d.R | 3 +--
R/visregLatticePlot.R | 1 +
README.md |only
inst/tests/formulas.R | 2 +-
inst/tests/mixed-models.R | 14 ++++++++++++++
tests/visreg-coxph.R | 1 +
12 files changed, 59 insertions(+), 23 deletions(-)
Title: Miscellaneous Functions for Survival Data
Diff between survMisc versions 0.4.4 dated 2015-01-06 and 0.4.5 dated 2015-02-25
Description: A collection of functions for analysis of survival data. These
extend the methods available in the survival package.
Author: Chris Dardis
Maintainer: Chris Dardis
DESCRIPTION | 6 +++---
MD5 | 10 +++++-----
NAMESPACE | 1 +
R/survMisc_package.R | 3 ++-
man/gof.Rd | 4 ++--
man/survMisc-package.Rd | 2 +-
6 files changed, 14 insertions(+), 12 deletions(-)
Title: Multitaper Spectral Analysis Tools
Diff between multitaper versions 1.0-10 dated 2015-02-18 and 1.0-11 dated 2015-02-25
Description: Implements multitaper spectral analysis using discrete prolate spheroidal sequences (Slepians) and sine tapers. It includes an adaptive weighted multitaper spectral estimate, a coherence estimate, Thomson's Harmonic F-test, and complex demodulation. The Slepians sequences are generated efficiently using a tridiagonal matrix solution, and jackknifed confidence intervals are available for most estimates.
Author: Karim Rahim
Maintainer: Karim Rahim
multitaper-1.0-10/multitaper/man/multitaper-package.Rd |only
multitaper-1.0-11/multitaper/DESCRIPTION | 10 ++++----
multitaper-1.0-11/multitaper/MD5 | 11 ++++-----
multitaper-1.0-11/multitaper/R/demod.R | 1
multitaper-1.0-11/multitaper/R/multitaper.R | 9 +++----
multitaper-1.0-11/multitaper/R/plots.R | 20 ++++++++---------
multitaper-1.0-11/multitaper/R/plotsHelper.R | 6 ++---
7 files changed, 27 insertions(+), 30 deletions(-)
Title: Multi-Model Inference
Diff between MuMIn versions 1.12.1 dated 2014-12-17 and 1.13.4 dated 2015-02-25
Description: Model selection and model averaging based on information criteria
(AICc and alike).
Author: Kamil Bartoń
Maintainer: Kamil Bartoń
MuMIn-1.12.1/MuMIn/R/QAIC.R |only
MuMIn-1.12.1/MuMIn/R/oldR.R |only
MuMIn-1.13.4/MuMIn/DESCRIPTION | 12
MuMIn-1.13.4/MuMIn/MD5 | 107 +++----
MuMIn-1.13.4/MuMIn/NAMESPACE | 20 -
MuMIn-1.13.4/MuMIn/NEWS | 46 +++
MuMIn-1.13.4/MuMIn/R/AICc.R | 102 ++++---
MuMIn-1.13.4/MuMIn/R/Cp.R | 2
MuMIn-1.13.4/MuMIn/R/DIC.R | 2
MuMIn-1.13.4/MuMIn/R/Weights.R | 2
MuMIn-1.13.4/MuMIn/R/coefTable.R | 9
MuMIn-1.13.4/MuMIn/R/dredge.R | 308 ++++++++++++-----------
MuMIn-1.13.4/MuMIn/R/ext-gamm.R | 2
MuMIn-1.13.4/MuMIn/R/ext.R | 60 +++-
MuMIn-1.13.4/MuMIn/R/formulas.R | 32 ++
MuMIn-1.13.4/MuMIn/R/get.models.R | 30 +-
MuMIn-1.13.4/MuMIn/R/getAllTerms.R | 192 +++++++-------
MuMIn-1.13.4/MuMIn/R/makeArgs.R | 37 +-
MuMIn-1.13.4/MuMIn/R/methods-logLik.R | 8
MuMIn-1.13.4/MuMIn/R/model.avg.R | 194 +++++++-------
MuMIn-1.13.4/MuMIn/R/model.sel.R | 93 +++---
MuMIn-1.13.4/MuMIn/R/model.selection.R | 66 ++--
MuMIn-1.13.4/MuMIn/R/pdredge.R | 272 +++++++++++---------
MuMIn-1.13.4/MuMIn/R/predict.R |only
MuMIn-1.13.4/MuMIn/R/quasiLik.R | 4
MuMIn-1.13.4/MuMIn/R/r.squaredGLMM.R | 31 --
MuMIn-1.13.4/MuMIn/R/r.squaredLR.R | 4
MuMIn-1.13.4/MuMIn/R/stdize.R | 115 ++++++--
MuMIn-1.13.4/MuMIn/R/substitution.R | 84 ++----
MuMIn-1.13.4/MuMIn/R/termdeps.R | 2
MuMIn-1.13.4/MuMIn/R/updateable.R | 20 -
MuMIn-1.13.4/MuMIn/R/utils-misc.R | 36 +-
MuMIn-1.13.4/MuMIn/R/utils-models.R | 102 ++++++-
MuMIn-1.13.4/MuMIn/man/AICc.Rd | 31 +-
MuMIn-1.13.4/MuMIn/man/ICs.Rd | 4
MuMIn-1.13.4/MuMIn/man/MuMIn-package.Rd | 5
MuMIn-1.13.4/MuMIn/man/QAIC.Rd | 12
MuMIn-1.13.4/MuMIn/man/QIC.Rd | 7
MuMIn-1.13.4/MuMIn/man/dredge.Rd | 42 +--
MuMIn-1.13.4/MuMIn/man/get.models.Rd | 9
MuMIn-1.13.4/MuMIn/man/importance.Rd | 8
MuMIn-1.13.4/MuMIn/man/mod.sel.Rd | 33 +-
MuMIn-1.13.4/MuMIn/man/model-utils.Rd | 19 -
MuMIn-1.13.4/MuMIn/man/model.avg.Rd | 83 +++---
MuMIn-1.13.4/MuMIn/man/nested.Rd | 4
MuMIn-1.13.4/MuMIn/man/pdredge.Rd | 4
MuMIn-1.13.4/MuMIn/man/predict.averaging.Rd | 29 +-
MuMIn-1.13.4/MuMIn/man/r.squaredGLMM.Rd | 5
MuMIn-1.13.4/MuMIn/man/stdize.Rd | 152 +++++++----
MuMIn-1.13.4/MuMIn/man/subset.model.selection.Rd | 10
MuMIn-1.13.4/MuMIn/man/updateable.Rd | 33 +-
MuMIn-1.13.4/MuMIn/man/weights.Rd | 10
MuMIn-1.13.4/MuMIn/tests/_gam.R | 3
MuMIn-1.13.4/MuMIn/tests/classes.R | 12
MuMIn-1.13.4/MuMIn/tests/coxme.R | 11
MuMIn-1.13.4/MuMIn/tests/unmarked.R | 36 +-
56 files changed, 1515 insertions(+), 1041 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2014-08-14 0.9.5
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2014-08-30 2.11.2.1
2014-06-25 2.11.1.1
2013-07-16 1.0.4
2013-06-25 1.0.3
Title: Construction, Simulation and Analysis of Boolean Networks
Diff between BoolNet versions 2.1.0 dated 2015-02-23 and 2.1.1 dated 2015-02-25
Description: Provides methods to reconstruct and generate synchronous,
asynchronous, probabilistic and temporal Boolean networks, and to
analyze and visualize attractors in Boolean networks.
Author: Christoph Müssel [aut],
Martin Hopfensitz [aut],
Dao Zhou [aut],
Hans A. Kestler [aut, cre],
Armin Biere [ctb] (contributed PicoSAT code),
Troy D. Hanson [ctb] (contributed uthash macros)
Maintainer: Hans A. Kestler
DESCRIPTION | 10
MD5 | 13
inst/NEWS.Rd | 6
inst/doc/BoolNet_package_vignette.pdf | 1555 +++++++++++++++++-----------------
man/BoolNet-package.Rd | 4
src/Makevars.win |only
src/picosat.c | 15
src/symbolic_simulator.c | 2
8 files changed, 809 insertions(+), 796 deletions(-)
Title: Serial Dependence Diagrams
Diff between SDD versions 1.1 dated 2014-02-27 and 1.2 dated 2015-02-25
Description: Allows for computing (and by default plotting) different types of serial dependence diagrams.
Author: Luca Bagnato, Lucio De Capitani, Angelo Mazza and Antonio Punzo
Maintainer: Angelo Mazza
DESCRIPTION | 10 +++++-----
MD5 | 9 +++++----
inst |only
man/ADF.Rd | 6 ++++--
man/SDD-package.Rd | 12 +++++++-----
man/SMI.Rd | 2 ++
6 files changed, 23 insertions(+), 16 deletions(-)
Title: Log-Gaussian Cox Process
Diff between lgcp versions 1.3-8 dated 2015-02-04 and 1.3-9 dated 2015-02-25
Description: Spatial and spatio-temporal modelling of point patterns using the
log-Gaussian Cox process. Bayesian inference for spatial, spatiotemporal,
multivariate and aggregated point processes using Markov chain Monte Carlo.
Author: B. M. Taylor, T. M. Davies, B. S. Rowlingson, P. J. Diggle. Additional
code contributions from E. Pebesma.
Maintainer: Benjamin M. Taylor
DESCRIPTION | 8 ++++----
MD5 | 4 ++--
inst/doc/lgcp.pdf |binary
3 files changed, 6 insertions(+), 6 deletions(-)
Title: Feature Grouping and Selection Over an Undirected Graph
Diff between FGSG versions 1.0 dated 2014-04-13 and 1.0.2 dated 2015-02-25
Description: Implement algorithms for feature grouping and selection over an undirected graph, solves problems like graph fused lasso, graph OSCAR and so on.
Author: Xiaotong Shen, Yiwen Sun, Julie Langou
Maintainer: Yiwen Sun
DESCRIPTION | 10 +++++-----
MD5 | 20 ++++++++++----------
NAMESPACE | 8 +++++++-
man/gflasso.Rd | 28 +++++++++++++++-------------
man/goscar.Rd | 27 ++++++++++++++-------------
man/ncFGS.Rd | 27 ++++++++++++++-------------
man/ncTF.Rd | 27 ++++++++++++++-------------
man/ncTFGS.Rd | 28 +++++++++++++++-------------
man/ncTL.Rd | 29 +++++++++++++++--------------
man/ncTLF.Rd | 29 +++++++++++++++--------------
src/lafunc.h | 22 +++++++++++-----------
11 files changed, 135 insertions(+), 120 deletions(-)
Title: Soil Database Interface
Diff between soilDB versions 1.5 dated 2015-02-20 and 1.5-2 dated 2015-02-25
Description: A collection of functions for reading data from USDA-NCSS soil databases.
Author: D.E. Beaudette and J.M. Skovlin
Maintainer: D.E. Beaudette
DESCRIPTION | 15 -
MD5 | 44 ++--
NEWS | 3
R/SDA_query.R | 2
R/SSURGO_spatial_query.R | 2
R/fetchNASIS.R | 4
R/fetchPedonPC.R | 4
R/get_colors_from_NASIS_db.R | 4
R/get_extended_data_from_NASIS_db.R | 4
R/get_hz_data_from_NASIS_db.R | 4
R/get_lablayer_data_from_NASIS_db.R | 6
R/get_labpedon_data_from_NASIS_db.R | 4
R/get_site_data_from_NASIS_db.R | 4
R/get_text_notes_from_NASIS_db.R | 4
R/mapunit_geom_by_ll_bbox.R | 2
R/nasis_component_data.R | 338 ++++++++++++++++++------------------
R/seriesExtent.R | 4
data/andic.subset.rda |binary
data/cisne.rda |binary
data/gSSURGO.chunk.rda |binary
data/gopheridge.rda |binary
data/loafercreek.rda |binary
man/SDA_query.Rd | 2
23 files changed, 224 insertions(+), 226 deletions(-)
Title: Skewed Generalized T Distribution
Diff between sgt versions 1.0 dated 2015-02-16 and 1.1 dated 2015-02-25
Description: Density, distribution function, quantile function and random generation for the skewed generalized t distribution. This package also provides a function that can fit data to the skewed generalized t distribution using maximum likelihood estimation.
Author: Carter Davis
Maintainer: Carter Davis
sgt-1.0/sgt/src |only
sgt-1.1/sgt/DESCRIPTION | 12 ++---
sgt-1.1/sgt/MD5 | 16 ++----
sgt-1.1/sgt/NAMESPACE | 2
sgt-1.1/sgt/R/SGT.R | 114 ++++++++++++++++++++++++------------------------
sgt-1.1/sgt/R/SGTMLE.R | 2
sgt-1.1/sgt/man/sgt.Rd | 24 ++--------
7 files changed, 77 insertions(+), 93 deletions(-)
Title: Read and Write MAT Files and Call MATLAB from Within R
Diff between R.matlab versions 3.1.1 dated 2014-10-10 and 3.2.0 dated 2015-02-25
Description: Methods readMat() and writeMat() for reading and writing MAT files. For user with MATLAB v6 or newer installed (either locally or on a remote host), the package also provides methods for controlling MATLAB (trademark) via R and sending and retrieving data between R and MATLAB.
Author: Henrik Bengtsson [aut, cre, cph], Andy Jacobson [ctb] (Internal MAT v4 reader), Jason Riedy [ctb] (Support for reading compressed files (via 'Rcompression'), sparse matrices and UTF-encoded strings.)
Maintainer: Henrik Bengtsson
DESCRIPTION | 17 +--
MD5 | 25 ++--
NEWS | 25 ++++
R/999.package.R | 2
R/Matlab.R | 25 +++-
R/readMat.R | 142 +++++++++++++++++---------
R/zzz.R | 2
inst/externals/MatlabServer.m | 9 +
inst/mat-files/SparseMatrix,all_zeros.mat |only
man/1._The_MATLAB_server_running_in_MATLAB.Rd | 9 +
man/Matlab.Rd | 43 +++++++
man/R.matlab-package.Rd | 9 -
man/readMat.Rd | 16 ++
tests/readMat.R | 84 +++++++++++----
14 files changed, 291 insertions(+), 117 deletions(-)
Title: Nonparametric Comparison of Multivariate Samples
Diff between npmv versions 2.1 dated 2013-12-04 and 2.2 dated 2015-02-25
Description: Performs analysis of one-way multivariate data, for small samples using Nonparametric techniques. Using approximations for ANOVA Type, Wilks' Lambda, Lawley Hotelling, and Bartlett Nanda Pillai Test statics, the package compares the multivariate distributions for a single explanatory variable. The comparison is also performed using a permutation test for each of the four test statistics. The package also performs an all-subsets algorithm regarding variables and regarding factor levels.
Author: Woodrow Burchett and Amanda Ellis
Maintainer: Amanda Ellis
DESCRIPTION | 10 +++---
MD5 | 14 ++++-----
NAMESPACE | 1
R/basenonpartest.R | 17 ++++++++++-
R/nonpartest.R | 56 ++++++++++++++++++++++++++++++--------
R/ssnonpartest.R | 76 +++++++++++++++++++++++++++++++++++++++++-----------
man/nonpartest.Rd | 7 +++-
man/npmv-package.Rd | 4 +-
8 files changed, 141 insertions(+), 44 deletions(-)
Title: Variable Importance Analysis with Population Intervention Models
Diff between multiPIM versions 1.4-1 dated 2014-04-14 and 1.4-3 dated 2015-02-25
Description: Performs variable importance analysis using a causal inference approach. This is done by fitting Population Intervention Models. The default is to use a Targeted Maximum Likelihood Estimator (TMLE). The other available estimators are Inverse Probability of Censoring Weighted (IPCW), Double-Robust IPCW (DR-IPCW), and Graphical Computation (G-COMP) estimators. Inference can be obtained from the influence curve (plug-in) or by bootstrapping.
Author: Stephan Ritter
Maintainer: Stephan Ritter
multiPIM-1.4-1/multiPIM/R/zzz.R |only
multiPIM-1.4-3/multiPIM/ChangeLog | 4 ++++
multiPIM-1.4-3/multiPIM/DESCRIPTION | 8 ++++----
multiPIM-1.4-3/multiPIM/MD5 | 7 +++----
multiPIM-1.4-3/multiPIM/R/multiPIMboot.R | 15 +++++++--------
5 files changed, 18 insertions(+), 16 deletions(-)
Title: Less Code, More Results
Diff between lessR versions 3.1.1 dated 2014-09-23 and 3.2 dated 2015-02-25
Description: Each function accomplishes the work of several or more standard R functions. For example, two function calls, Read() and CountAll(), read the data and generate descriptive statistics for all variables in the data frame, plus histograms and bar charts as appropriate. Other functions provide for descriptive statistics, a comprehensive regression analysis, analysis of variance and t-test, plotting, bar chart, histogram, box plot, density curves, calibrated power curve, reading multiple data formats with the same function and color themes. The function Help provides a help system that suggests specific analyses and functions. Variable labels are available. A confirmatory factor analysis of multiple indicator measurement models is also available as is a pedagogical routines for data simulation such as for the Central Limit Theorem.
Author: David W. Gerbing, School of Business Administration, Portland State University
Maintainer: David W. Gerbing
lessR-3.1.1/lessR/R/den.zmain.R |only
lessR-3.2/lessR/DESCRIPTION | 8
lessR-3.2/lessR/MD5 | 87 +++----
lessR-3.2/lessR/NEWS | 33 ++
lessR-3.2/lessR/R/ANOVA.R | 17 +
lessR-3.2/lessR/R/ANOVAz1.R | 46 ++-
lessR-3.2/lessR/R/ANOVAz2.R | 36 ++
lessR-3.2/lessR/R/BarChart.R | 6
lessR-3.2/lessR/R/BoxPlot.R | 4
lessR-3.2/lessR/R/Density.R | 4
lessR-3.2/lessR/R/Help.R | 272 +++++++++-------------
lessR-3.2/lessR/R/Histogram.R | 6
lessR-3.2/lessR/R/LineChart.R | 4
lessR-3.2/lessR/R/Logit.R | 2
lessR-3.2/lessR/R/Regression.R | 21 +
lessR-3.2/lessR/R/ScatterPlot.R | 27 +-
lessR-3.2/lessR/R/bc.data.frame.R | 4
lessR-3.2/lessR/R/bc.zmain.R | 6
lessR-3.2/lessR/R/bx.zmain.R | 8
lessR-3.2/lessR/R/corScree.R | 33 ++
lessR-3.2/lessR/R/dn.zmain.R | 6
lessR-3.2/lessR/R/dp.zmain.R | 4
lessR-3.2/lessR/R/hst.zmain.R | 6
lessR-3.2/lessR/R/lc.zmain.R | 6
lessR-3.2/lessR/R/logit.z4Pred.R | 7
lessR-3.2/lessR/R/pc.zmain.R | 31 ++
lessR-3.2/lessR/R/plt.zmain.R | 10
lessR-3.2/lessR/R/reg.z3Residual.R | 297 ++++++++++++------------
lessR-3.2/lessR/R/reg.z5Plot.R | 56 +++-
lessR-3.2/lessR/R/simCLT.R | 2
lessR-3.2/lessR/R/tt.z1graph.R | 2
lessR-3.2/lessR/R/tt.z1group.R | 86 ++++--
lessR-3.2/lessR/R/tt.z2graph.R | 2
lessR-3.2/lessR/R/tt.z2group.R | 75 +++---
lessR-3.2/lessR/R/ttest.R | 456 ++++++++++++++++++++++++++++++++-----
lessR-3.2/lessR/R/ttp2zgraph.R | 2
lessR-3.2/lessR/R/zzz.R | 67 +++--
lessR-3.2/lessR/man/BarChart.Rd | 5
lessR-3.2/lessR/man/BoxPlot.Rd | 7
lessR-3.2/lessR/man/Density.Rd | 9
lessR-3.2/lessR/man/Histogram.Rd | 14 -
lessR-3.2/lessR/man/LineChart.Rd | 21 +
lessR-3.2/lessR/man/PieChart.Rd | 4
lessR-3.2/lessR/man/ScatterPlot.Rd | 9
lessR-3.2/lessR/man/ttest.Rd | 2
45 files changed, 1179 insertions(+), 631 deletions(-)
Title: Interactive Q-Learning
Diff between iqLearn versions 1.2 dated 2014-03-04 and 1.3 dated 2015-02-25
Description: Estimate an optimal dynamic treatment regime using Interactive Q-learning.
Author: Kristin A. Linn, Eric B. Laber, Leonard A. Stefanski
Maintainer: Kristin A. Linn
DESCRIPTION | 10 +++---
MD5 | 68 ++++++++++++++++++++++----------------------
NAMESPACE | 36 +++++++++++++++++++++++
README.md |only
build/vignette.rds |binary
inst/CITATION |only
inst/doc/iqLearn.Rnw | 2 -
inst/doc/iqLearn.pdf |binary
man/IQ1.Rd | 5 +--
man/IQ2.Rd | 5 +--
man/iqLearn-package.Rd | 5 +--
man/learnIQ1.Rd | 5 +--
man/learnIQ1cm.Rd | 5 +--
man/learnIQ1main.Rd | 5 +--
man/learnIQ1var.Rd | 5 +--
man/learnIQ2.Rd | 5 +--
man/plot.iqResids.Rd | 5 +--
man/plot.learnIQ1cm.Rd | 5 +--
man/plot.learnIQ1main.Rd | 5 +--
man/plot.learnIQ1var.Rd | 5 +--
man/plot.learnIQ2.Rd | 5 +--
man/plot.qLearnS1.Rd | 5 +--
man/plot.qLearnS2.Rd | 5 +--
man/qLearnQ1.Rd | 5 +--
man/qLearnQ2.Rd | 5 +--
man/qLearnS1.Rd | 5 +--
man/qLearnS2.Rd | 5 +--
man/summary.learnIQ1cm.Rd | 5 +--
man/summary.learnIQ1main.Rd | 5 +--
man/summary.learnIQ1var.Rd | 5 +--
man/summary.learnIQ2.Rd | 5 +--
man/summary.qLearnS1.Rd | 5 +--
man/summary.qLearnS2.Rd | 5 +--
man/summary.value.Rd | 5 +--
man/value.Rd | 5 +--
vignettes/iqLearn.Rnw | 2 -
36 files changed, 159 insertions(+), 94 deletions(-)
Title: Dunn's Test of Multiple Comparisons Using Rank Sums
Diff between dunn.test versions 1.2.2 dated 2015-01-03 and 1.2.3 dated 2015-02-25
Description: Computes Dunn's test (1964) for stochastic dominance and reports the results among multiple pairwise comparisons after a Kruskal-Wallis test for stochastic dominance among k groups (Kruskal and Wallis, 1952). The interpretation of stochastic dominance requires an assumption that the CDF of one group does not cross the CDF of the other. dunn.test makes k(k-1)/2 multiple pairwise comparisons based on Dunn's z-test-statistic approximations to the actual rank statistics. The null hypothesis for each pairwise comparison is that the probability of observing a randomly selected value from the first group that is larger than a randomly selected value from the second group equals one half; this null hypothesis corresponds to that of the Wilcoxon-Mann-Whitney rank-sum test. Like the rank-sum test, if the data can be assumed to be continuous, and the distributions are assumed identical except for a difference in location, Dunn's test may be understood as a test for median difference. dunn.test accounts for tied ranks.
Author: Alexis Dinno
Maintainer: Alexis Dinno
DESCRIPTION | 10 +++++-----
MD5 | 6 +++---
R/dunn.test.R | 18 ++++++++++++++----
man/dunn.test.Rd | 3 ++-
4 files changed, 24 insertions(+), 13 deletions(-)
More information about BayesSummaryStatLM at CRAN
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