Sun, 22 Mar 2015

Package MPTinR updated to version 1.7.5 with previous version 1.6.3 dated 2014-10-21

Title: Analyze Multinomial Processing Tree Models
Description: Provides a user-friendly way for the analysis of multinomial processing tree (MPT) models (e.g., Riefer, D. M., and Batchelder, W. H. [1988]. Multinomial modeling and the measurement of cognitive processes. Psychological Review, 95, 318-339) for single and multiple datasets. The main functions perform model fitting and model selection. Model selection can be done using AIC, BIC, or the Fisher Information Approximation (FIA) a measure based on the Minimum Description Length (MDL) framework. The model and restrictions can be specified in external files or within an R script in an intuitive syntax or using the context-free language for MPTs. The 'classical' .EQN file format for model files is also supported. Besides MPTs, MPTinR can fit a wide variety of other cognitive models such as SDT models (see fit.model). MPTinR supports multicore fitting and FIA calculation using the snowfall package. MPTinR can generate data from a model for e.g., simulation or parametric bootstrap and plot predicted versus observed data.
Author: Henrik Singmann [aut, cre], David Kellen [aut], Quentin Gronau [aut], Christian Mueller [ctb], Akhil S Bhel [ctb]
Maintainer: Henrik Singmann

Diff between MPTinR versions 1.6.3 dated 2014-10-21 and 1.7.5 dated 2015-03-22

 DESCRIPTION           |   14 
 MD5                   |   28 -
 NEWS                  |   65 ++-
 R/bmpt.fia.R          |    2 
 R/fit.mpt.old.R       |    4 
 R/fit.mptinr.R        |   31 +
 R/select.mpt.R        |   20 -
 data/d.broeder.rda    |binary
 data/rb.fig1.data.rda |binary
 data/rb.fig2.data.rda |binary
 man/fit.mpt.Rd        |  814 +++++++++++++++++++++++++-------------------------
 man/fit.mptinr.Rd     |    2 
 man/gen.data.Rd       |    3 
 man/select.mpt.Rd     |   15 
 src/RcppExports.cpp   |   58 +--
 15 files changed, 548 insertions(+), 508 deletions(-)

More information about MPTinR at CRAN
Permanent link

Package MCS updated to version 0.1.1 with previous version 0.1.0 dated 2014-11-18

Title: Model Confidence Set Procedure
Description: Perform the model confidence set procedure of Hansen et al (2011).
Author: Leopoldo Catania & Mauro Bernardi
Maintainer: Leopoldo Catania

Diff between MCS versions 0.1.0 dated 2014-11-18 and 0.1.1 dated 2015-03-22

 DESCRIPTION    |    6 -
 MD5            |    8 +-
 R/MCS.R        |  227 ++++++++++++++++++++++++++-------------------------------
 man/LossVaR.Rd |    2 
 man/LossVol.Rd |    4 -
 5 files changed, 115 insertions(+), 132 deletions(-)

More information about MCS at CRAN
Permanent link

Package readstata13 updated to version 0.6 with previous version 0.5-3 dated 2015-02-11

Title: Import Stata 13 Data Files
Description: Function to read and write the Stata 13 file format.
Author: Jan Marvin Garbuszus [aut], Sebastian Jeworutzki [aut, cre], R Core Team [cph]
Maintainer: Sebastian Jeworutzki

Diff between readstata13 versions 0.5-3 dated 2015-02-11 and 0.6 dated 2015-03-22

 CHANGELOG                 |    4 +
 DESCRIPTION               |    6 -
 MD5                       |   33 +++++----
 NAMESPACE                 |    2 
 R/dbcal.R                 |only
 R/save.R                  |    4 -
 R/tools.R                 |  167 ++++++++++++++++++++++++++++------------------
 README.md                 |only
 inst/extdata/sp500.stbcal |only
 inst/extdata/statacar.dta |binary
 man/as.caldays.Rd         |only
 man/get.label.Rd          |    4 -
 man/get.origin.codes.Rd   |    8 +-
 man/set.label.Rd          |    9 +-
 man/set.lang.Rd           |   10 ++
 man/stbcal.Rd             |only
 src/RcppExports.cpp       |   32 +++-----
 src/rcpp_readstata.cpp    |    3 
 src/rcpp_savestata.cpp    |    5 -
 src/statadefines.h        |   10 +-
 20 files changed, 177 insertions(+), 120 deletions(-)

More information about readstata13 at CRAN
Permanent link

Package psd updated to version 1.0-1 with previous version 1.0-0 dated 2015-03-18

Title: Adaptive, Sine-Multitaper Power Spectral Density Estimation
Description: Produces power spectral density estimates through iterative refinement of the optimal number of sine-tapers at each frequency. This optimization procedure is based on the method of Riedel and Sidorenko (1995), which minimizes the Mean Square Error (sum of variance and bias) at each frequency, but modified for computational stability.
Author: Andrew J. Barbour and Robert L. Parker, with contributions from David Myer
Maintainer: Andrew J. Barbour

Diff between psd versions 1.0-0 dated 2015-03-18 and 1.0-1 dated 2015-03-22

 psd-1.0-0/psd/vignettes/fftw.synctex.gz               |only
 psd-1.0-0/psd/vignettes/normalization.synctex.gz      |only
 psd-1.0-0/psd/vignettes/psd_overview.synctex.gz       |only
 psd-1.0-1/psd/DESCRIPTION                             |   13 +-
 psd-1.0-1/psd/MD5                                     |   81 ++++++++----------
 psd-1.0-1/psd/R/func_pspectrum.R                      |   12 +-
 psd-1.0-1/psd/inst/Examples/rdex_confint.R            |   12 ++
 psd-1.0-1/psd/inst/Examples/rdex_constraintapers.R    |   11 +-
 psd-1.0-1/psd/inst/Examples/rdex_normalization.R      |   25 +++--
 psd-1.0-1/psd/inst/Examples/rdex_parabolicweights.R   |   13 +-
 psd-1.0-1/psd/inst/Examples/rdex_pilotspec.R          |   11 +-
 psd-1.0-1/psd/inst/Examples/rdex_prewhiten.R          |   34 ++++---
 psd-1.0-1/psd/inst/Examples/rdex_psdcore.R            |   12 +-
 psd-1.0-1/psd/inst/Examples/rdex_psdenv.R             |   12 ++
 psd-1.0-1/psd/inst/Examples/rdex_pspectrum.R          |   64 ++------------
 psd-1.0-1/psd/inst/Examples/rdex_riedsid.R            |   14 ++-
 psd-1.0-1/psd/inst/Examples/rdex_spec.R               |   20 ++--
 psd-1.0-1/psd/inst/Examples/rdex_spectralproperties.R |   26 +----
 psd-1.0-1/psd/inst/Examples/rdex_splinegrad.R         |    9 +-
 psd-1.0-1/psd/inst/Examples/rdex_tapers.R             |    4 
 psd-1.0-1/psd/inst/Examples/rdex_utilities.R          |    3 
 psd-1.0-1/psd/inst/NEWS.Rd                            |   19 ++++
 psd-1.0-1/psd/inst/doc/fftw.pdf                       |binary
 psd-1.0-1/psd/inst/doc/normalization.pdf              |binary
 psd-1.0-1/psd/inst/doc/psd_overview.pdf               |binary
 psd-1.0-1/psd/man/as.tapers.Rd                        |    4 
 psd-1.0-1/psd/man/parabolic_weights.Rd                |   13 +-
 psd-1.0-1/psd/man/pilot_spec.Rd                       |   11 +-
 psd-1.0-1/psd/man/prewhiten.Rd                        |   34 ++++---
 psd-1.0-1/psd/man/psd-environment.Rd                  |   12 ++
 psd-1.0-1/psd/man/psd-normalization.Rd                |   25 +++--
 psd-1.0-1/psd/man/psd-utilities.Rd                    |    3 
 psd-1.0-1/psd/man/psdcore.Rd                          |   12 +-
 psd-1.0-1/psd/man/pspectrum.Rd                        |   76 +++-------------
 psd-1.0-1/psd/man/riedsid.Rd                          |   14 ++-
 psd-1.0-1/psd/man/spec-methods.Rd                     |   20 ++--
 psd-1.0-1/psd/man/spec_confint.Rd                     |   12 ++
 psd-1.0-1/psd/man/spectral_properties.Rd              |   26 +----
 psd-1.0-1/psd/man/splineGrad.Rd                       |    9 +-
 psd-1.0-1/psd/man/tapers-constraints.Rd               |   11 +-
 psd-1.0-1/psd/src/RcppExports.cpp                     |    4 
 psd-1.0-1/psd/src/resample_fft.cpp                    |   23 +++--
 psd-1.0-1/psd/tests/testthat/test-fft.R               |   40 +++++---
 43 files changed, 383 insertions(+), 361 deletions(-)

More information about psd at CRAN
Permanent link

Package mvMORPH updated to version 1.0.4 with previous version 1.0.3 dated 2015-03-17

Title: Multivariate Comparative Tools for Fitting Evolutionary Models to Morphometric Data
Description: Fits multivariate (Brownian Motion, Early Burst, ACDC, Ornstein-Uhlenbeck and Shifts) models of continuous traits evolution on trees.
Author: Julien Clavel, with contributions from Aaron King, and Emmanuel Paradis
Maintainer: Julien Clavel

Diff between mvMORPH versions 1.0.3 dated 2015-03-17 and 1.0.4 dated 2015-03-22

 DESCRIPTION                   |    6 +++---
 MD5                           |   39 ++++++++++++++++++++-------------------
 R/fun.r                       |    2 +-
 R/mvBM.r                      |    4 ++--
 R/mvEB.r                      |    4 ++--
 R/mvSHIFT.r                   |    2 +-
 R/testLRT.r                   |    2 +-
 man/mv.Precalc.Rd             |    4 ++--
 man/mvBM.Rd                   |    2 +-
 man/mvEB.Rd                   |   18 +++++++++++-------
 man/mvSHIFT.Rd                |    2 +-
 man/mvSIM.Rd                  |    4 ++--
 src/covar-matrix-simmap.c     |    2 +-
 src/covar.h                   |only
 src/kronecker.c               |    4 +++-
 src/mvmorph-covar-mat.c       |    2 +-
 src/mvmorph-covar-ou-sparse.c |    2 +-
 src/mvmorph.h                 |   14 --------------
 src/pic_loglik_mvmorph.c      |    8 ++++----
 src/weight-matrix-mvmorph.c   |    2 +-
 src/weight-matrix-simmap.c    |    2 +-
 21 files changed, 59 insertions(+), 66 deletions(-)

More information about mvMORPH at CRAN
Permanent link

Package ROCR updated to version 1.0-6 with previous version 1.0-5 dated 2013-05-16

Title: Visualizing the Performance of Scoring Classifiers
Description: ROC graphs, sensitivity/specificity curves, lift charts, and precision/recall plots are popular examples of trade-off visualizations for specific pairs of performance measures. ROCR is a flexible tool for creating cutoff-parameterized 2D performance curves by freely combining two from over 25 performance measures (new performance measures can be added using a standard interface). Curves from different cross-validation or bootstrapping runs can be averaged by different methods, and standard deviations, standard errors or box plots can be used to visualize the variability across the runs. The parameterization can be visualized by printing cutoff values at the corresponding curve positions, or by coloring the curve according to cutoff. All components of a performance plot can be quickly adjusted using a flexible parameter dispatching mechanism. Despite its flexibility, ROCR is easy to use, with only three commands and reasonable default values for all optional parameters.
Author: Tobias Sing, Oliver Sander, Niko Beerenwinkel, Thomas Lengauer
Maintainer: Billy Aung Myint

Diff between ROCR versions 1.0-5 dated 2013-05-16 and 1.0-6 dated 2015-03-22

 ROCR-1.0-5/ROCR/README.unittests     |only
 ROCR-1.0-5/ROCR/unittests            |only
 ROCR-1.0-6/ROCR/DESCRIPTION          |   16 +++++++++-------
 ROCR-1.0-6/ROCR/MD5                  |   14 ++++----------
 ROCR-1.0-6/ROCR/data/ROCR.hiv.rda    |binary
 ROCR-1.0-6/ROCR/data/ROCR.simple.rda |binary
 ROCR-1.0-6/ROCR/data/ROCR.xval.rda   |binary
 7 files changed, 13 insertions(+), 17 deletions(-)

More information about ROCR at CRAN
Permanent link

Package latentnet updated to version 2.7.0 with previous version 2.6.0 dated 2014-12-24

Title: Latent Position and Cluster Models for Statistical Networks
Description: Fit and simulate latent position and cluster models for statistical networks.
Author: Pavel N. Krivitsky [aut, cre], Mark S. Handcock [aut], Susan M. Shortreed [ctb], Jeremy Tantrum [ctb], Peter D. Hoff [ctb], Li Wang [ctb], Kirk Li [ctb]
Maintainer: Pavel N. Krivitsky

Diff between latentnet versions 2.6.0 dated 2014-12-24 and 2.7.0 dated 2015-03-22

 latentnet-2.6.0/latentnet/R/ergmm.midarrow.R            |only
 latentnet-2.6.0/latentnet/man/latentnet.Rd              |only
 latentnet-2.7.0/latentnet/ChangeLog                     |   57 +++-
 latentnet-2.7.0/latentnet/DESCRIPTION                   |   18 -
 latentnet-2.7.0/latentnet/LICENSE                       |    4 
 latentnet-2.7.0/latentnet/MD5                           |  193 ++++++++--------
 latentnet-2.7.0/latentnet/NAMESPACE                     |   30 ++
 latentnet-2.7.0/latentnet/R/InitErgmm.fixed.R           |   12 
 latentnet-2.7.0/latentnet/R/InitErgmm.latent.R          |    9 
 latentnet-2.7.0/latentnet/R/InitErgmm.random.R          |    9 
 latentnet-2.7.0/latentnet/R/P.alloc.R                   |    9 
 latentnet-2.7.0/latentnet/R/bayesmbc.MCMC.C.R           |    9 
 latentnet-2.7.0/latentnet/R/bayesmbc.R                  |    9 
 latentnet-2.7.0/latentnet/R/ergmm.MCMC.C.R              |   10 
 latentnet-2.7.0/latentnet/R/ergmm.R                     |   13 -
 latentnet-2.7.0/latentnet/R/ergmm.defaults.R            |    9 
 latentnet-2.7.0/latentnet/R/ergmm.draw.utils.R          |only
 latentnet-2.7.0/latentnet/R/ergmm.families.R            |    9 
 latentnet-2.7.0/latentnet/R/ergmm.geodesicmatrix.R      |    9 
 latentnet-2.7.0/latentnet/R/ergmm.get.model.R           |    9 
 latentnet-2.7.0/latentnet/R/ergmm.initvals.R            |   11 
 latentnet-2.7.0/latentnet/R/ergmm.latent.effects.R      |    9 
 latentnet-2.7.0/latentnet/R/ergmm.par.R                 |   11 
 latentnet-2.7.0/latentnet/R/ergmm.permutation.R         |    9 
 latentnet-2.7.0/latentnet/R/ergmm.probs.R               |   53 +---
 latentnet-2.7.0/latentnet/R/ergmm.statseval.R           |   40 +--
 latentnet-2.7.0/latentnet/R/ergmm.tuner.R               |    9 
 latentnet-2.7.0/latentnet/R/gof.ergmm.R                 |    9 
 latentnet-2.7.0/latentnet/R/label.switching.R           |    9 
 latentnet-2.7.0/latentnet/R/latent.R                    |    9 
 latentnet-2.7.0/latentnet/R/mcmc.diagnostics.ergmm.R    |   15 -
 latentnet-2.7.0/latentnet/R/merge.ergmm.R               |   11 
 latentnet-2.7.0/latentnet/R/plot.ergmm.R                |   23 -
 latentnet-2.7.0/latentnet/R/predict.ergmm.R             |    9 
 latentnet-2.7.0/latentnet/R/print.ergmm.R               |    9 
 latentnet-2.7.0/latentnet/R/print.ergmm.model.R         |    9 
 latentnet-2.7.0/latentnet/R/procrustes.R                |   19 -
 latentnet-2.7.0/latentnet/R/simulate.ergmm.R            |    9 
 latentnet-2.7.0/latentnet/R/summary.ergmm.R             |   37 +--
 latentnet-2.7.0/latentnet/R/utilities.R                 |    9 
 latentnet-2.7.0/latentnet/R/zzz.R                       |   13 -
 latentnet-2.7.0/latentnet/data/davis.RData              |binary
 latentnet-2.7.0/latentnet/inst/CITATION                 |   40 +++
 latentnet-2.7.0/latentnet/man/as.mcmc.list.ergmm.Rd     |    9 
 latentnet-2.7.0/latentnet/man/davis.Rd                  |   16 -
 latentnet-2.7.0/latentnet/man/ergmm.Rd                  |   15 -
 latentnet-2.7.0/latentnet/man/ergmm.control.Rd          |    9 
 latentnet-2.7.0/latentnet/man/ergmm.drawpie.Rd          |only
 latentnet-2.7.0/latentnet/man/ergmm.object.Rd           |    9 
 latentnet-2.7.0/latentnet/man/ergmm.par.list.object.Rd  |   10 
 latentnet-2.7.0/latentnet/man/ergmm.prior.Rd            |    9 
 latentnet-2.7.0/latentnet/man/families.ergmm.Rd         |   10 
 latentnet-2.7.0/latentnet/man/gof.ergmm.Rd              |   12 
 latentnet-2.7.0/latentnet/man/latentnet-internal.Rd     |  128 ----------
 latentnet-2.7.0/latentnet/man/latentnet-package.Rd      |only
 latentnet-2.7.0/latentnet/man/mcmc.diagnostics.ergmm.Rd |    9 
 latentnet-2.7.0/latentnet/man/merge.ergmm.Rd            |    9 
 latentnet-2.7.0/latentnet/man/plot.ergmm.Rd             |    9 
 latentnet-2.7.0/latentnet/man/predict.ergmm.Rd          |    9 
 latentnet-2.7.0/latentnet/man/sampson.Rd                |    9 
 latentnet-2.7.0/latentnet/man/simulate.ergmm.Rd         |    9 
 latentnet-2.7.0/latentnet/man/summary.ergmm.Rd          |   82 +++++-
 latentnet-2.7.0/latentnet/man/terms.ergmm.Rd            |   11 
 latentnet-2.7.0/latentnet/man/tribes.Rd                 |    9 
 latentnet-2.7.0/latentnet/src/P_alloc.c                 |    9 
 latentnet-2.7.0/latentnet/src/P_alloc.h                 |    9 
 latentnet-2.7.0/latentnet/src/ergmm_families.c          |    9 
 latentnet-2.7.0/latentnet/src/ergmm_families.h          |    9 
 latentnet-2.7.0/latentnet/src/ergmm_latent_effects.c    |    9 
 latentnet-2.7.0/latentnet/src/ergmm_latent_effects.h    |    9 
 latentnet-2.7.0/latentnet/src/ergmm_probs.c             |   11 
 latentnet-2.7.0/latentnet/src/ergmm_probs.h             |    9 
 latentnet-2.7.0/latentnet/src/ergmm_sampler.c           |   11 
 latentnet-2.7.0/latentnet/src/ergmm_sampler.h           |    9 
 latentnet-2.7.0/latentnet/src/ergmm_structs.h           |    9 
 latentnet-2.7.0/latentnet/src/ergmm_updaters.c          |    9 
 latentnet-2.7.0/latentnet/src/ergmm_updaters.h          |    9 
 latentnet-2.7.0/latentnet/src/ergmm_utils.c             |    9 
 latentnet-2.7.0/latentnet/src/ergmm_utils.h             |    9 
 latentnet-2.7.0/latentnet/src/kl_switch.c               |    9 
 latentnet-2.7.0/latentnet/src/kl_switch.h               |    9 
 latentnet-2.7.0/latentnet/src/matrix_utils.c            |    9 
 latentnet-2.7.0/latentnet/src/matrix_utils.h            |    9 
 latentnet-2.7.0/latentnet/src/mbc_sampler.c             |    9 
 latentnet-2.7.0/latentnet/src/mbc_sampler.h             |    9 
 latentnet-2.7.0/latentnet/src/mvnorm.c                  |    9 
 latentnet-2.7.0/latentnet/src/mvnorm.h                  |    9 
 latentnet-2.7.0/latentnet/src/post_predict.c            |   11 
 latentnet-2.7.0/latentnet/src/post_predict.h            |    9 
 latentnet-2.7.0/latentnet/src/procrustes.c              |    9 
 latentnet-2.7.0/latentnet/src/procrustes.h              |    9 
 latentnet-2.7.0/latentnet/src/wishart.c                 |    9 
 latentnet-2.7.0/latentnet/src/wishart.h                 |    9 
 latentnet-2.7.0/latentnet/tests/examples.R              |    9 
 latentnet-2.7.0/latentnet/tests/missing.R               |    9 
 latentnet-2.7.0/latentnet/tests/nolatent.R              |    9 
 latentnet-2.7.0/latentnet/tests/nomcmc.R                |    9 
 latentnet-2.7.0/latentnet/tests/nomixing.R              |    9 
 latentnet-2.7.0/latentnet/tests/normal.R                |   15 -
 latentnet-2.7.0/latentnet/tests/onlymcmc.R              |    9 
 100 files changed, 378 insertions(+), 1131 deletions(-)

More information about latentnet at CRAN
Permanent link

New package waffle with initial version 0.3
Package: waffle
Type: Package
Title: Create Waffle Chart Visualizations in R
Version: 0.3
Date: 2015-03-20
Author: Bob Rudis
Maintainer: Bob Rudis
Description: Square pie charts (a.k.a. waffle charts) can be used to communicate parts of a whole for categorical quantities. To emulate the percentage view of a pie chart, a 10x10 grid should be used with each square representing 1% of the total. Modern uses of waffle charts do not necessarily adhere to this rule and can be created with a grid of any rectangular shape. Best practices suggest keeping the number of categories small, just as should be done when creating pie charts.
URL: http://github.com/hrbrmstr/waffle
BugReports: https://github.com/hrbrmstr/waffle/issues
Suggests: testthat
Depends: R (>= 3.0.0), ggplot2
License: GPL (>= 2)
Imports: RColorBrewer, grid, gridExtra, gtable
Packaged: 2015-03-21 18:40:12 UTC; bob
NeedsCompilation: no
Repository: CRAN
Date/Publication: 2015-03-22 08:07:57

More information about waffle at CRAN
Permanent link

Package TR8 updated to version 0.9.13 with previous version 0.9.12 dated 2015-03-04

Title: A Tool for Downloading Functional Traits Data for Plant Species
Description: Plant ecologists often need to collect "traits" data about plant species which are often scattered among various databases: TR8 contains a set of tools which take care of automatically retrieving some of those functional traits data for plant species from publicly available databases (Biolflor, The Ecological Flora of the British Isles, LEDA traitbase, Ellenberg values for Italian Flora, Mycorrhizal intensity databases, Catminat). The TR8 name, inspired by "car plates" jokes, was chosen since it both reminds of the main object of the package and is extremely short to type.
Author: Gionata Bocci
Maintainer: Gionata Bocci

Diff between TR8 versions 0.9.12 dated 2015-03-04 and 0.9.13 dated 2015-03-22

 DESCRIPTION                |   11 +-
 MD5                        |   55 +++++++-------
 NAMESPACE                  |    2 
 R/LEDA.R                   |   12 +--
 R/biolflor.R               |    5 +
 R/catminat.R               |only
 R/catminat_download.R      |only
 R/ecoflora.R               |   46 +++++++++++-
 R/leda_download.R          |    2 
 R/local_storage.R          |   15 ++--
 R/mycoflor.R               |   15 ++--
 R/results.R                |    2 
 R/tr8.R                    |   96 ++++++++++++++++++++------
 R/tr8_gui.R                |   10 +-
 data/available_tr8.rda     |binary
 data/column_list.rda       |binary
 data/traits_eco.rda        |binary
 inst/CITATION              |    9 +-
 inst/doc/Expanding_TR8.pdf |binary
 inst/doc/TR8.R             |   40 +++++++---
 inst/doc/TR8.Rnw           |  166 +++++++++++++++++++++++++++++++--------------
 inst/doc/TR8.pdf           |binary
 inst/doc/TR8_workflow.pdf  |binary
 man/TR8-package.Rd         |   19 ++++-
 man/Tr8-class.Rd           |    7 +
 man/column_list.Rd         |  126 +++++++++++++++++++++++-----------
 man/tr8.Rd                 |   11 ++
 vignettes/TR8.Rnw          |  166 +++++++++++++++++++++++++++++++--------------
 vignettes/temp.ps          |only
 vignettes/tr8.bib          |   11 ++
 30 files changed, 592 insertions(+), 234 deletions(-)

More information about TR8 at CRAN
Permanent link

New package sjmisc with initial version 1.0.0
Package: sjmisc
Type: Package
Encoding: UTF-8
Title: Miscellaneous Data Management Tools
Version: 1.0.0
Date: 2015-03-21
Author: Daniel Lüdecke
Maintainer: Daniel Lüdecke
Description: Collection of several utility functions for reading or writing data, recoding and labelling variables and some frequently used statistical tests.
License: GPL-3
Imports: MASS
Suggests: coin, foreign, haven, lme4, stringdist
URL: https://github.com/sjPlot/sjmisc
BugReports: https://github.com/sjPlot/sjmisc/issues
Packaged: 2015-03-21 07:45:15 UTC; Luedeke
NeedsCompilation: no
Repository: CRAN
Date/Publication: 2015-03-22 08:07:48

More information about sjmisc at CRAN
Permanent link

Package Coxnet updated to version 0.1-1 with previous version 0.1 dated 2015-03-17

Title: Regularized Cox Model
Description: Cox model regularized with net (L1 and Laplacian), elastic-net (L1 and L2) or lasso (L1) penalty. In addition, it can truncate the estimate by a hard threshold, which is selected simultaneously with other tuning parameters. Moreover, it can handle the adaptive version of these regularization forms, such as adaptive lasso and net adjusting for signs of linked coefficients. The package uses one-step coordinate descent algorithm and runs extremely fast by taking into account the sparsity structure of coefficients.
Author: Xiang Li, Donglin Zeng and Yuanjia Wang
Maintainer: Xiang Li

Diff between Coxnet versions 0.1 dated 2015-03-17 and 0.1-1 dated 2015-03-22

 DESCRIPTION           |   10 +++++-----
 MD5                   |   12 ++++++------
 man/Coxnet-package.Rd |    6 +++---
 man/Coxnet.Rd         |    8 ++++----
 man/coxsplit.Rd       |    8 +++-----
 man/print.Coxnet.Rd   |    1 -
 src/Coxnet.cpp        |    2 +-
 7 files changed, 22 insertions(+), 25 deletions(-)

More information about Coxnet at CRAN
Permanent link

New package assertr with initial version 0.4
Package: assertr
Type: Package
Title: Assertive Programming for R Analysis Pipelines
Version: 0.4
Authors@R: person("Tony", "Fischetti", email="tony.fischetti@gmail.com", role = c("aut", "cre"))
Maintainer: Tony Fischetti
Description: Provides functionality to assert conditions that have to be met so that errors in data used in analysis pipelines can fail quickly. Similar to 'stopifnot()' but more powerful, friendly, and easier for use in pipelines.
URL: https://github.com/tonyfischetti/assertr
BugReports: https://github.com/tonyfischetti/assertr/issues
License: MIT + file LICENSE
LazyData: TRUE
Imports: dplyr,
Suggests: knitr, testthat, magrittr
VignetteBuilder: knitr
Packaged: 2015-03-21 19:02:19 UTC; tonyfischetti
Author: Tony Fischetti [aut, cre]
NeedsCompilation: no
Repository: CRAN
Date/Publication: 2015-03-22 08:03:30

More information about assertr at CRAN
Permanent link


Built and running on Debian GNU/Linux using R, littler and blosxom. Styled with Bootstrap.