Wed, 25 Mar 2015

Package jsonlite updated to version 0.9.15 with previous version 0.9.14 dated 2014-12-01

Title: A Robust, High Performance JSON Parser and Generator for R
Description: A fast JSON parser and generator optimized for statistical data and the web. Started out as a fork of RJSONIO, but has been completely rewritten in recent versions. The package offers flexible, robust, high performance tools for working with JSON in R and is particularly powerful for building pipelines and interacting with web APIs. The implementation is based on the mapping described in the vignette of the package (Ooms, 2014). In addition to drop-in replacements for toJSON and fromJSON, jsonlite contains functions to stream, validate, and prettify JSON data. The unit tests included with the package verify that all edge cases are encoded and decoded consistently for use with dynamic data in systems and applications.
Author: Jeroen Ooms, Duncan Temple Lang, Lloyd Hilaiel
Maintainer: Jeroen Ooms

Diff between jsonlite versions 0.9.14 dated 2014-12-01 and 0.9.15 dated 2015-03-25

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Package fitbitScraper updated to version 0.1.2 with previous version 0.1.1 dated 2015-01-30

Title: Scrapes Data from Fitbit.com
Description: Scrapes data from fitbit.com. This does not use the official API, but instead uses the API that the web dashboard uses to generate the graphs displayed on the dashboard after login at www.fitbit.com.
Author: Cory Nissen [aut, cre]
Maintainer: Cory Nissen

Diff between fitbitScraper versions 0.1.1 dated 2015-01-30 and 0.1.2 dated 2015-03-25

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Package vines updated to version 1.1.3 with previous version 1.1.1 dated 2015-01-20

Title: Multivariate Dependence Modeling with Vines
Description: Implementation of the vine graphical model for building high-dimensional distributions as a factorization of bivariate copulas and marginal density functions. This package provides S4 classes for vines (C-vines and D-vines) and methods for inference, goodness-of-fit tests, density/distribution function evaluation, and simulation.
Author: Yasser Gonzalez-Fernandez [aut, cre], Marta Soto [aut]
Maintainer: Yasser Gonzalez-Fernandez

Diff between vines versions 1.1.1 dated 2015-01-20 and 1.1.3 dated 2015-03-25

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Package glmgraph updated to version 1.0.1 with previous version 1.0.0 dated 2015-03-15

Title: Graph-Constrained Regularization for Sparse Generalized Linear Models
Description: We propose to use sparse regression model to achieve variable selection while accounting for graph-constraints among coefficients. Different linear combination of a sparsity penalty(L1) and a smoothness(MCP) penalty has been used, which induces both sparsity of the solution and certain smoothness on the linear coefficients.
Author: Li Chen, Jun Chen
Maintainer: Li Chen

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Package pheno2geno updated to version 1.3.1 with previous version 1.2.1 dated 2014-07-29

Title: High-Throughput Generation of Genetic Markers and Maps from Molecular Phenotypes for Crosses Between Inbred Strains
Description: High-throughput generation of genetic markers from molecular phenotypes for crosses between inbred strains. These markers can be use to saturate existing genetic map or creating a new one.
Author: Konrad Zych and Danny Arends
Maintainer: Konrad Zych

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Package mapmisc updated to version 1.2.1 with previous version 1.2.0 dated 2015-03-23

Title: Utilities for Producing Maps
Description: A minimal, light-weight set of tools for producing nice looking maps in R.
Author: Patrick Brown [aut, cre], Barry Rowlingson [ctb]
Maintainer: Patrick Brown

Diff between mapmisc versions 1.2.0 dated 2015-03-23 and 1.2.1 dated 2015-03-25

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Package investr updated to version 1.3.0 with previous version 1.2.1 dated 2015-01-06

Title: Inverse Estimation/Calibration Functions
Description: Functions to facilitate inverse estimation/calibration in linear, generalized linear, nonlinear, and (linear) mixed models. A generic function is also provided for plotting fitted regression models with or without confidence/prediction bands that may be of use to the general user.
Author: Brandon M. Greenwell
Maintainer: Brandon M. Greenwell

Diff between investr versions 1.2.1 dated 2015-01-06 and 1.3.0 dated 2015-03-25

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Package flexCWM updated to version 1.5 with previous version 1.4 dated 2015-01-31

Title: Flexible Cluster-Weighted Modeling
Description: Allows for maximum likelihood fitting of cluster-weighted models, a class of mixtures of regression models with random covariates.
Author: Mazza A., Punzo A., Ingrassia S.
Maintainer: Angelo Mazza

Diff between flexCWM versions 1.4 dated 2015-01-31 and 1.5 dated 2015-03-25

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Package sn updated to version 1.2-0 with previous version 1.1-2 dated 2014-12-01

Title: The Skew-Normal and Skew-t Distributions
Description: Define and manipulate probability distributions of the skew-normal family and some related ones (notably the skew-t family) and provide related statistical methods for data fitting and diagnostics, in the univariate and the multivariate case.
Author: Adelchi Azzalini
Maintainer: Adelchi Azzalini

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Package kohonen updated to version 2.0.18 with previous version 2.0.15 dated 2014-08-04

Title: Supervised and Unsupervised Self-Organising Maps
Description: Functions to train supervised and self-organising maps (SOMs). Also interrogation of the maps and prediction using trained maps are supported. The name of the package refers to Teuvo Kohonen, the inventor of the SOM.
Author: Ron Wehrens
Maintainer: Ron Wehrens

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New package hsdar with initial version 0.1.1
Package: hsdar
Type: Package
Title: Manage, Analyse and Simulate Hyperspectral Data in R
Version: 0.1.1
Date: 2015-03-23
Author: Lukas W. Lehnert [cre, aut], Hanna Meyer [ctb], Joerg Bendix [ctb]
Maintainer: Lukas W. Lehnert
Depends: R (>= 2.10.0), sp, raster, rgdal, rootSolve, signal, methods
Description: Transformation of reflectance spectra, calculation of vegetation indices and red edge parameters, spectral resampling for hyperspectral remote sensing, simulation of reflectance and transmittance using PROSPECT and PROSAIL.
License: GPL
LazyLoad: yes
BuildVignettes: yes
Copyright: see file COPYRIGHTS
URL: http://lcrs.geographie.uni-marburg.de, http://teledetection.ipgp.jussieu.fr/prosail/
Packaged: 2015-03-23 09:32:58 UTC; lehnert
NeedsCompilation: yes
X-CRAN-History: Archived on 2015-03-06 as had memory-access errors and failed with parallel makes.
Repository: CRAN
Date/Publication: 2015-03-25 08:54:00

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Package hiddenf updated to version 1.2 with previous version 1.1 dated 2014-09-08

Title: The all-Configurations, Maximum-Interaction F-Test for Hidden Additivity
Description: Computes the F-test and Bonferroni-adjusted p-value for a test of interaction in two-factor studies. Reports corresponding interaction plot and analysis of variance table and p-values from several other tests of non-additivity.
Author: Jason A. Osborne, Christopher T. Franck and Bongseog Choi
Maintainer: Jason A. Osborne

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 hiddenf-1.2/hiddenf/R/MandelPvalue.R         |only
 hiddenf-1.2/hiddenf/R/TukeyPvalue.R          |only
 hiddenf-1.2/hiddenf/R/additivityPvalues.R    |only
 hiddenf-1.2/hiddenf/R/anova.hiddenf.R        |   21 +++---
 hiddenf-1.2/hiddenf/R/computePSS.R           |only
 hiddenf-1.2/hiddenf/R/hiddenf.R              |   94 ++++++++++++++++++---------
 hiddenf-1.2/hiddenf/R/makemtx.fcn.R          |   10 +-
 hiddenf-1.2/hiddenf/R/maketall.fcn.R         |   40 +++++------
 hiddenf-1.2/hiddenf/R/plot.hiddenf.R         |   37 ++++++----
 hiddenf-1.2/hiddenf/R/print.hiddenf.R        |   26 +++----
 hiddenf-1.2/hiddenf/R/rconfig.fcn.R          |   94 +++++++++++++--------------
 hiddenf-1.2/hiddenf/R/rkconfig.fcn.R         |only
 hiddenf-1.2/hiddenf/R/summary.hiddenf.R      |   36 ++++++----
 hiddenf-1.2/hiddenf/data/Boik.mtx.rda        |binary
 hiddenf-1.2/hiddenf/data/Graybill.mtx.rda    |only
 hiddenf-1.2/hiddenf/data/cjejuni.mtx.rda     |binary
 hiddenf-1.2/hiddenf/data/cnv1.mtx.rda        |binary
 hiddenf-1.2/hiddenf/data/cnvall.mtx.rda      |binary
 hiddenf-1.2/hiddenf/man/Boik.mtx.Rd          |    5 -
 hiddenf-1.2/hiddenf/man/Graybill.mtx.Rd      |only
 hiddenf-1.2/hiddenf/man/KKSAPvalue.Rd        |only
 hiddenf-1.2/hiddenf/man/MalikPvalue.Rd       |only
 hiddenf-1.2/hiddenf/man/MalikTab.Rd          |only
 hiddenf-1.2/hiddenf/man/Malikfunction.Rd     |only
 hiddenf-1.2/hiddenf/man/MandelPvalue.Rd      |only
 hiddenf-1.2/hiddenf/man/TukeyPvalue.Rd       |only
 hiddenf-1.2/hiddenf/man/additivityPvalues.Rd |only
 hiddenf-1.2/hiddenf/man/anova.hiddenf.Rd     |   15 +---
 hiddenf-1.2/hiddenf/man/cjejuni.mtx.Rd       |   12 +--
 hiddenf-1.2/hiddenf/man/cnv1.mtx.Rd          |    6 -
 hiddenf-1.2/hiddenf/man/cnvall.mtx.Rd        |   10 +-
 hiddenf-1.2/hiddenf/man/hiddenf-package.Rd   |   31 ++++++--
 hiddenf-1.2/hiddenf/man/hiddenf.Rd           |   25 ++-----
 hiddenf-1.2/hiddenf/man/plot.hiddenf.Rd      |   24 +++---
 hiddenf-1.2/hiddenf/man/print.hiddenf.Rd     |   13 +--
 hiddenf-1.2/hiddenf/man/summary.hiddenf.Rd   |   17 ++--
 45 files changed, 335 insertions(+), 271 deletions(-)

More information about hiddenf at CRAN
Permanent link

Package diseasemapping updated to version 1.2.0 with previous version 1.1.7 dated 2015-02-25

Title: Modelling Spatial Variation in Disease Risk for Areal Data
Description: Formatting of population and case data, calculation of Standardized Incidence Ratios, and fitting the BYM model using INLA.
Author: Patrick Brown
Maintainer: Patrick Brown

Diff between diseasemapping versions 1.1.7 dated 2015-02-25 and 1.2.0 dated 2015-03-25

 DESCRIPTION                   |   12 ++++-----
 MD5                           |   28 ++++++++++-----------
 R/bym.R                       |    1 
 R/getBreaks.R                 |    7 +++--
 R/getSMR.R                    |   23 +++++++++++------
 data/casedata.RData           |binary
 data/kentucky.RData           |binary
 data/popdata.RData            |binary
 data/referencepop.RData       |binary
 man/cancerRates.Rd            |    7 -----
 man/diseasemapping-package.Rd |    4 ---
 man/kentucky.Rd               |    1 
 man/popdata.Rd                |   54 +++++++++++++++++++++++++++++++++++++++++-
 tests/cancerRates.R           |    1 
 tests/getSMR.R                |    7 +++--
 15 files changed, 98 insertions(+), 47 deletions(-)

More information about diseasemapping at CRAN
Permanent link


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