Fri, 27 Mar 2015

New package StatMeasures with initial version 1.0
Package: StatMeasures
Type: Package
Title: Easy Data Manipulation, Data Quality and Statistical Checks
Version: 1.0
Date: 2015-03-24
Author: Akash Jain
Maintainer: Akash Jain
Description: Offers useful functions to perform day-to-day data manipulation operations, data quality checks and post modelling statistical checks. One can effortlessly change class of a number of variables to factor, remove duplicate observations from the data, create deciles of a variable, perform data quality checks for continuous (integer or numeric), categorical (factor) and date variables, and compute goodness of fit measures such as auc for statistical models. The functions are consistent for objects of class 'data.frame' and 'data.table', which is an enhanced 'data.frame' implemented in the package 'data.table'.
Depends: R (>= 3.1.3)
Imports: data.table (>= 1.9.4)
License: GPL-2
Packaged: 2015-03-27 19:59:01 UTC; akash.jain
NeedsCompilation: no
Repository: CRAN
Date/Publication: 2015-03-27 23:46:22

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New package SOMbrero with initial version 1.0
Package: SOMbrero
Title: SOM Bound to Realize Euclidean and Relational Outputs
Version: 1.0
Date: 2015-03-27
Authors@R: c(person("Laura", "Bendhaiba", role = "aut", email="laurabendhaiba@gmail.com"), person("Julien", "Boelaert", role= "aut", email="julien.boelaert@gmail.com"), person("Madalina", "Olteanu", role = "aut", email="madalina.olteanu@univ-paris1.fr"), person("Nathalie", "Villa-Vialaneix", role = c("aut", "cre"), email="nathalie.villa@toulouse.inra.fr"))
Maintainer: Nathalie Villa-Vialaneix
Description: The stochastic (also called on-line) version of the Self-Organising Map (SOM) algorithm is provided. Different versions of the algorithm are implemented, for numeric and relational data and for contingency tables. The package also contains many plotting features (to help the user interpret the results) and a graphical user interface based on shiny (which is also available on-line at http://shiny.nathalievilla.org/sombrero).
Depends: R (>= 3.0), knitr, igraph (>= 0.6)
Imports: wordcloud, scatterplot3d, RColorBrewer, shiny
License: GPL (>= 2)
Repository: CRAN
VignetteBuilder: knitr
Packaged: 2015-03-27 20:51:28 UTC; nathalie
Author: Laura Bendhaiba [aut], Julien Boelaert [aut], Madalina Olteanu [aut], Nathalie Villa-Vialaneix [aut, cre]
NeedsCompilation: no
Date/Publication: 2015-03-27 23:44:41

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Package miniCRAN updated to version 0.2.4 with previous version 0.2.2 dated 2015-03-26

Title: Create a Mini Version of CRAN Containing Only Selected Packages
Description: Makes it possible to create an internally consistent repository consisting of selected packages from CRAN-like repositories. The user specifies a set of desired packages, and miniCRAN recursively reads the dependency tree for these packages, then downloads only this subset. The user can then install packages from this repository directly, rather than from CRAN. This is useful in production settings, e.g. server behind a firewall, or remote locations with slow broadband access.
Author: Revolution Analytics [aut], Andrie de Vries [aut, cre], Alex Chubaty [ctb]
Maintainer: Andrie de Vries

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Package HiDimDA updated to version 0.2-3 with previous version 0.2-2 dated 2014-10-25

Title: High Dimensional Discriminant Analysis
Description: Performs linear discriminant analysis in high dimensional problems based on reliable covariance estimators for problems with (many) more variables than observations. Includes routines for classifier training, prediction, cross-validation and variable selection.
Author: Antonio Pedro Duarte Silva
Maintainer: Antonio Pedro Duarte Silva

Diff between HiDimDA versions 0.2-2 dated 2014-10-25 and 0.2-3 dated 2015-03-27

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Package AutoSEARCH updated to version 1.5 with previous version 1.4 dated 2014-12-22

Title: General-to-Specific (GETS) Modelling
Description: General-to-Specific (GETS) modelling of the mean and variance of a regression. NOTE: The package has been succeeded by gets, also available on the CRAN, which is more user-friendly, faster and easier to extend. Users are therefore encouraged to consider gets instead.
Author: Genaro Sucarrat
Maintainer: Genaro Sucarrat

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Package tmap updated to version 0.7 with previous version 0.6 dated 2014-07-30

Title: Thematic Maps
Description: Thematic maps are geographical maps in which statistical data are visualized. This package offers a flexible, layer-based, way to create thematic maps, such as choropleths and bubble maps.
Author: Martijn Tennekes
Maintainer: Martijn Tennekes

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Package HiClimR updated to version 1.2.0 with previous version 1.1.6 dated 2015-03-01

Title: Hierarchical Climate Regionalization
Description: A tool for Hierarchical Climate Regionalization applicable to any correlation-based clustering. It adds several features and a new clustering method (called, 'regional' linkage) to hierarchical clustering in R ('hclust' function in 'stats' library): data regridding, coarsening spatial resolution, geographic masking (by continents, regions, or countries), data filtering by mean and/or variance thresholds, data preprocessing (detrending, standardization, and PCA), faster correlation function with preliminary big data support, hybrid hierarchical clustering, multi-variate clustering (MVC), cluster validation, and visualization of region maps.
Author: Hamada S. Badr [aut, cre], Benjamin F. Zaitchik [aut], Amin K. Dezfuli [aut]
Maintainer: Hamada S. Badr

Diff between HiClimR versions 1.1.6 dated 2015-03-01 and 1.2.0 dated 2015-03-27

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New package gdm with initial version 1.0
Package: gdm
Type: Package
Title: Functions for Generalized Dissimilarity Modeling
Version: 1.0
Date: 2015-03-27
Author: Glenn Manion, Matthew Lisk, Simon Ferrier, Diego Nieto-Lugilde, Matthew C. Fitzpatrick
Maintainer: Matthew C. Fitzpatrick
Description: A toolkit with functions to fit, plot, and summarize Generalized Dissimilarity Models.
License: GPL-2
Depends: R (>= 2.15.2), Rcpp (>= 0.10.4), raster, reshape2, vegan
LinkingTo: Rcpp
Imports: plyr
Packaged: 2015-03-27 18:56:55 UTC; mlisk
NeedsCompilation: yes
Repository: CRAN
Date/Publication: 2015-03-27 20:58:26

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Package LPStimeSeries updated to version 1.0-5 with previous version 1.0-4 dated 2015-01-09

Title: Learned Pattern Similarity and Representation for Time Series
Description: Learned Pattern Similarity (LPS) for time series. Implements a novel approach to model the dependency structure in time series that generalizes the concept of autoregression to local auto-patterns. Generates a pattern-based representation of time series along with a similarity measure called Learned Pattern Similarity (LPS). Introduces a generalized autoregressive kernel.This package is based on the 'randomForest' package by Andy Liaw.
Author: Learned Pattern Similarity (LPS) for time series by Mustafa Gokce Baydogan
Maintainer: Mustafa Gokce Baydogan

Diff between LPStimeSeries versions 1.0-4 dated 2015-01-09 and 1.0-5 dated 2015-03-27

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Package fanc updated to version 1.23 with previous version 1.22 dated 2015-03-18

Title: Penalized Likelihood Factor Analysis via Nonconvex Penalty
Description: An R package "fanc" computes the penalized maximum likelihood estimates of factor loadings and unique variances for various tuning parameters. The pathwise coordinate descent along with EM algorithm is used. This package also includes a new graphical tool which outputs path diagram, goodness-of-fit indices and model selection criteria for each regularization parameter. The user can change the regularization parameter by manipulating scrollbars, which is helpful to find a suitable value of regularization parameter.
Author: Kei Hirose, Michio Yamamoto, Haruhisa Nagata
Maintainer: Kei Hirose

Diff between fanc versions 1.22 dated 2015-03-18 and 1.23 dated 2015-03-27

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Package adehabitat updated to version 1.8.17 with previous version 1.8.15 dated 2014-12-17

Title: Analysis of Habitat Selection by Animals
Description: A collection of tools for the analysis of habitat selection by animals.
Author: Clement Calenge, contributions from Mathieu Basille, Stephane Dray and Scott Fortmann-Roe
Maintainer: Clement Calenge

Diff between adehabitat versions 1.8.15 dated 2014-12-17 and 1.8.17 dated 2015-03-27

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Package tm.plugin.europresse updated to version 1.2 with previous version 1.1 dated 2014-06-11

Title: Import Articles from 'Europresse' Using the 'tm' Text Mining Framework
Description: Provides a 'tm' Source to create corpora from articles exported from the 'Europresse' content provider as HTML files. It is able to read both text content and meta-data information (including source, date, title, author and pages).
Author: Milan Bouchet-Valat [aut, cre]
Maintainer: Milan Bouchet-Valat

Diff between tm.plugin.europresse versions 1.1 dated 2014-06-11 and 1.2 dated 2015-03-27

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Package eurostat updated to version 1.0.16 with previous version 1.0.15 dated 2015-03-20

Title: Tools for Eurostat Open Data
Description: Tools to download data from the Eurostat database http://ec.europa.eu/eurostat/ together with search and manipulation utilities.
Author: Lahti Leo [aut, cre], Biecek Przemyslaw [aut], Kainu Markus [aut], Huovari Janne [aut]
Maintainer: Lahti Leo

Diff between eurostat versions 1.0.15 dated 2015-03-20 and 1.0.16 dated 2015-03-27

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Package adehabitatMA updated to version 0.3.9 with previous version 0.3.8 dated 2013-09-23

Title: Tools to Deal with Raster Maps
Description: A collection of tools to deal with raster maps.
Author: Clement Calenge, contributions from Mathieu Basille
Maintainer: Clement Calenge

Diff between adehabitatMA versions 0.3.8 dated 2013-09-23 and 0.3.9 dated 2015-03-27

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Package adehabitatLT updated to version 0.3.18 with previous version 0.3.17 dated 2014-12-17

Title: Analysis of Animal Movements
Description: A collection of tools for the analysis of animal movements.
Author: Clement Calenge, contributions from Stephane Dray and Manuela Royer
Maintainer: Clement Calenge

Diff between adehabitatLT versions 0.3.17 dated 2014-12-17 and 0.3.18 dated 2015-03-27

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Package adehabitatHS updated to version 0.3.11 with previous version 0.3.10 dated 2014-12-17

Title: Analysis of Habitat Selection by Animals
Description: A collection of tools for the analysis of habitat selection.
Author: Clement Calenge, contributions from Mathieu Basille
Maintainer: Clement Calenge

Diff between adehabitatHS versions 0.3.10 dated 2014-12-17 and 0.3.11 dated 2015-03-27

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Package adehabitatHR updated to version 0.4.13 with previous version 0.4.12 dated 2014-12-17

Title: Home Range Estimation
Description: A collection of tools for the estimation of animals home range.
Author: Clement Calenge, contributions from Scott Fortmann-Roe
Maintainer: Clement Calenge

Diff between adehabitatHR versions 0.4.12 dated 2014-12-17 and 0.4.13 dated 2015-03-27

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Package rDEA updated to version 1.1-1 with previous version 1.0-2 dated 2014-12-21

Title: Robust Data Envelopment Analysis (DEA) for R
Description: Data Envelopment Analysis for R, estimating robust DEA scores without and with environmental variables and doing returns-to-scale tests.
Author: Jaak Simm [aut, cre], Galina Besstremyannaya [aut]
Maintainer: Jaak Simm

Diff between rDEA versions 1.0-2 dated 2014-12-21 and 1.1-1 dated 2015-03-27

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Package RAdwords updated to version 0.1.2 with previous version 0.1.1 dated 2014-11-11

Title: Loading Google Adwords Data into R
Description: The aim of RAdwords is loading Adwords data into R. Therefore the package implements three main features. First, the package provides an authentication process for R with the Adwords API via OAUTH2. Second, the package offers an interface to apply the Adwords query language in R and query the Adwords API with ad-hoc reports. Third, the received data are transformed into suitable data formats for further data processing and data analysis.
Author: Johannes Burkhardt , Matthias Bannert
Maintainer: Johannes Burkhardt

Diff between RAdwords versions 0.1.1 dated 2014-11-11 and 0.1.2 dated 2015-03-27

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 RAdwords-0.1.2/RAdwords/DESCRIPTION                                                      |   12 
 RAdwords-0.1.2/RAdwords/LICENSE                                                          |    2 
 RAdwords-0.1.2/RAdwords/MD5                                                              |  170 ++++++----
 RAdwords-0.1.2/RAdwords/NAMESPACE                                                        |    2 
 RAdwords-0.1.2/RAdwords/NEWS                                                             |only
 RAdwords-0.1.2/RAdwords/R/getData.R                                                      |    6 
 RAdwords-0.1.2/RAdwords/R/metrics.R                                                      |   14 
 RAdwords-0.1.2/RAdwords/R/reports.R                                                      |   16 
 RAdwords-0.1.2/RAdwords/R/statement.R                                                    |    2 
 RAdwords-0.1.2/RAdwords/R/transformData.R                                                |   35 +-
 RAdwords-0.1.2/RAdwords/README.md                                                        |   10 
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 RAdwords-0.1.2/RAdwords/man/RAdwords.Rd                                                  |   22 +
 RAdwords-0.1.2/RAdwords/man/changeNames.Rd                                               |    3 
 RAdwords-0.1.2/RAdwords/man/doAuth.Rd                                                    |    3 
 RAdwords-0.1.2/RAdwords/man/getAuth.Rd                                                   |    3 
 RAdwords-0.1.2/RAdwords/man/getData.Rd                                                   |    9 
 RAdwords-0.1.2/RAdwords/man/loadToken.Rd                                                 |    3 
 RAdwords-0.1.2/RAdwords/man/metrics.Rd                                                   |    7 
 RAdwords-0.1.2/RAdwords/man/refreshToken.Rd                                              |    3 
 RAdwords-0.1.2/RAdwords/man/reports.Rd                                                   |    8 
 RAdwords-0.1.2/RAdwords/man/statement.Rd                                                 |    5 
 RAdwords-0.1.2/RAdwords/man/transformData.Rd                                             |    7 
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Package hgm (with last version 1.10) was removed from CRAN

Previous versions (as known to CRANberries) which should be available via the Archive link are:

2015-03-27 1.10

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Package rsprng (with last version 1.0) was removed from CRAN

Previous versions (as known to CRANberries) which should be available via the Archive link are:

2010-03-09 1.0
2008-06-08 0.4
2007-05-10 0.3-4

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New package PAFit with initial version 0.7.2
Package: PAFit
Type: Package
Title: Nonparametric Estimation of Preferential Attachment and Node Fitness in Temporal Complex Networks
Version: 0.7.2
Date: 2015-03-28
Author: Thong Pham, Paul Sheridan, Hidetoshi Shimodaira
Maintainer: Thong Pham
Description: A statistically sound method for estimating jointly the attachment function and node fitness in a temporal complex network by maximizing a suitable penalized log-likelihood function is implemented in this package.
URL: www.thongpham.net
License: GPL-3
Depends: R(>= 2.10.0)
Imports: Rcpp (>= 0.11.3)
LinkingTo: Rcpp
LazyData: True
NeedsCompilation: yes
Suggests: R.rsp
VignetteBuilder: R.rsp
Packaged: 2015-03-27 06:49:35 UTC; pham
Repository: CRAN
Date/Publication: 2015-03-27 08:31:40

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New package ELYP with initial version 0.7-1
Package: ELYP
Maintainer: Mai Zhou
Version: 0.7-1
Depends: R (>= 2.15.0), survival
Suggests: emplik
Author: Mai Zhou
Description: Empirical likelihood ratio tests for the Yang and Prentice (short/long term hazard ratio) models. Empirical likelihood tests within a Cox model, for parameters defined via both baseline hazard function and regression parameters.
Title: Empirical Likelihood Analysis for the Cox Model and Yang-Prentice (2005) Model
License: GPL (>= 2)
URL: http://www.ms.uky.edu/~mai/EmpLik.html
NeedsCompilation: yes
Packaged: 2015-03-27 06:41:46 UTC; mai
Repository: CRAN
Date/Publication: 2015-03-27 08:31:37

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Package s20x updated to version 3.1-15 with previous version 3.1-12 dated 2015-02-13

Title: Functions for University of Auckland Course STATS 201/208 Data Analysis
Description: A set of functions used in teaching STATS 201/208 Data Analysis at the University of Auckland. The functions are designed to make parts of R more accessible to a large undergraduate population who are mostly not statistics majors.
Author: Andrew Balemi, Dineika Chandra, James Curran, Brant Deppa, Mike Forster, Brendan McArdle, Chris Wild
Maintainer: James Curran

Diff between s20x versions 3.1-12 dated 2015-02-13 and 3.1-15 dated 2015-03-27

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New package SAMUR with initial version 0.6
Package: SAMUR
Type: Package
Title: Stochastic Augmentation of Matched Data Using Restriction Methods
Version: 0.6
Date: 2015-03-26
Author: Mansour T.A. Sharabiani, Alireza S. Mahani
Maintainer: Alireza S. Mahani
Description: Augmenting a matched data set by generating multiple stochastic, matched samples from the data using a multi-dimensional histogram constructed from dropping the input matched data into a multi-dimensional grid built on the full data set. The resulting stochastic, matched sets will likely provide a collectively higher coverage of the full data set compared to the single matched set. Each stochastic match is without duplication, thus allowing downstream validation techniques such as cross-validation to be applied to each set without concern for overfitting.
License: GPL (>= 2)
Imports: Matching
Packaged: 2015-03-27 02:20:08 UTC; amahani
NeedsCompilation: no
Repository: CRAN
Date/Publication: 2015-03-27 07:15:54

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New package hgm with initial version 1.10
Package: hgm
Type: Package
Depends: R (>= 2.6.0), deSolve
Title: Holonomic Gradient Method and Gradient Descent
Version: 1.10
Date: 2015-03-26
Author: Nobuki Takayama, Tamio Koyama, Tomonari Sei, Hiromasa Nakayama, Kenta Nishiyama
Maintainer: Nobuki Takayama
Description: The holonomic gradient method (HGM, hgm) gives a way to evaluate normalization constants of unnormalized probability distributions by utilizing holonomic systems of differential or difference equations. The holonomic gradient descent (HGD, hgd) gives a method to find maximal likelihood estimates by utilizing the HGM.
License: GPL-2
LazyLoad: yes
URL: http://www.openxm.org
Packaged: 2015-03-27 02:38:17 UTC; taka
NeedsCompilation: yes
Repository: CRAN
Date/Publication: 2015-03-27 07:16:52

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