Title: Inverse Regression for Text Analysis
Diff between textir versions 2.0-2 dated 2014-01-30 and 2.0-3 dated 2015-04-01
Description: Multinomial [inverse] regression inference for text documents and associated attributes. Provides fast sparse multinomial logistic regression for phrase counts. A minimalist partial least squares routine is also included. Note that the topic modeling capability of textir is now a separate package, maptpx.
Author: Matt Taddy
Maintainer: Matt Taddy
DESCRIPTION | 7 +++----
MD5 | 6 +++---
README.md | 6 ++++--
inst/CITATION | 4 ++--
4 files changed, 12 insertions(+), 11 deletions(-)
Title: Distance Sampling Analyses
Diff between Rdistance versions 1.1 dated 2012-12-07 and 1.2.1 dated 2015-04-01
Description: Analysis of distance sampling data collected on line transect surveys. Estimates distance-based detection functions and abundances.
Author: Trent McDonald [cre, aut],
Ryan Nielson [aut],
Jason Carlisle [aut],
James Griswald [ctb],
Joel Reynolds [ctb],
Pham Quang [ctb],
Earl Becker [ctb],
Aaron Christ [ctb],
Brook Russelland [ctb],
Patrick McKann [ctb]
Maintainer: Trent McDonald
DESCRIPTION | 42 +++-
MD5 | 41 ++--
NAMESPACE | 1
R/AIC.dfunc.R | 12 -
R/F.abund.estim.r | 414 +++++++++++++++++++++++++++--------------------
R/F.automated.CDA.r | 274 ++++++++++++++-----------------
R/F.dfunc.estim.R | 113 +++++-------
R/perp.dists.R |only
R/zzz.R | 21 +-
data |only
man/AIC.dfunc.Rd | 43 ++--
man/ESW.Rd | 37 ++--
man/F.abund.estim.Rd | 126 ++++++--------
man/F.automated.CDA.Rd | 172 +++++++++----------
man/F.dfunc.estim.Rd | 94 +++-------
man/F.gx.estim.Rd | 3
man/Gamma.like.Rd | 3
man/Rdistance-package.Rd | 57 ++----
man/coef.dfunc.Rd | 33 ++-
man/perp.dists.Rd |only
man/sparrow.covs.Rd |only
man/sparrow.dists.Rd |only
man/uniform.like.Rd | 12 -
vignettes |only
24 files changed, 768 insertions(+), 730 deletions(-)
Title: Predicting Species Accumulation Curves
Diff between preseqR versions 1.1 dated 2015-03-11 and 1.1.1 dated 2015-04-01
Description: Estimating species accumulation curves by rational function approximations to the non-parametric empirical Bayes estimator and by the zero-truncated Negative Binomial distribution.
Author: Chao Deng, Timothy Daley and Andrew D. Smith
Maintainer: Chao Deng
DESCRIPTION | 8 ++++----
MD5 | 26 +++++++++++++-------------
R/continued_fraction.R | 28 ++++++++++++++++++----------
R/simulation.R | 4 ++--
R/ztnb.R | 12 +++++++++---
README.md | 5 +++++
man/preseqR.interpolate.distinct.Rd | 4 ++--
man/preseqR.nonreplace.sampling.Rd | 4 ++--
man/preseqR.rfa.curve.Rd | 4 ++--
man/preseqR.rfa.species.accum.curve.Rd | 8 ++++----
man/preseqR.simu.hist.Rd | 6 +++---
man/preseqR.ztnb.em.Rd | 4 ++--
man/preseqR.ztnb.estimate.Rd | 4 ++--
man/preseqR.ztnb.species.accum.curve.Rd | 4 ++--
14 files changed, 70 insertions(+), 51 deletions(-)
Title: Permutational Algorithm to Simulate Survival Data
Diff between PermAlgo versions 1.0 dated 2010-10-12 and 1.1 dated 2015-04-01
Description: This version of the permutational algorithm generates a
dataset in which event and censoring times are conditional on
an user-specified list of covariates, some or all of which are
time-dependent.
Author: Marie-Pierre Sylvestre, Thad Edens, Todd MacKenzie, Michal
Abrahamowicz
Maintainer: Marie-Pierre Sylvestre
DESCRIPTION | 12 ++++++------
MD5 | 4 ++--
inst/CITATION | 8 ++++----
3 files changed, 12 insertions(+), 12 deletions(-)
Title: MAP Estimation of Topic Models
Diff between maptpx versions 1.9-1 dated 2013-12-01 and 1.9-2 dated 2015-04-01
Description: Posterior maximization for topic models (LDA) in text analysis,
as described in Taddy (2012) `on estimation and selection for topic models'. Previous versions of this code were included as part of the textir package. If you want to take advantage of openmp parallelization, uncomment the relevant flags in src/MAKEVARS before compiling.
Author: Matt Taddy
Maintainer: Matt Taddy
DESCRIPTION | 9 ++++-----
MD5 | 16 ++++++++--------
NAMESPACE | 2 +-
R/count.R | 2 +-
R/tpx.R | 7 ++++---
inst/CITATION | 4 ++--
man/counts.Rd | 8 ++++----
man/topics.Rd | 4 ++--
src/Makevars | 2 +-
9 files changed, 27 insertions(+), 27 deletions(-)
Title: Gamma Lasso Regression
Diff between gamlr versions 1.12-1 dated 2014-10-01 and 1.13 dated 2015-04-01
Description: The gamma lasso algorithm provides regularization paths corresponding to a range of non-convex cost functions between L0 and L1 norms. As much as possible, usage for this package is analogous to that for the glmnet package (which does the same thing for penalization between L1 and L2 norms). For details see: Taddy (2015), One-Step Estimator Paths for Concave Regularization, http://arxiv.org/abs/1308.5623.
Author: Matt Taddy
Maintainer: Matt Taddy
DESCRIPTION | 10 ++---
MD5 | 11 +++---
R/AICc.R | 1
R/gamlr.R | 31 ++++++++++++-----
inst |only
man/gamlr.Rd | 2 -
src/gamlr.c | 107 ++++++++++++++++++++++++++++++-----------------------------
7 files changed, 89 insertions(+), 73 deletions(-)
Title: Distributed Multinomial Regression
Diff between distrom versions 0.3-1 dated 2014-10-01 and 0.3-2 dated 2015-04-01
Description: Estimation for a multinomial logistic regression factorized into independent Poisson log regressions. See the textir package for applications in multinomial inverse regression analysis of text.
Author: Matt Taddy
Maintainer: Matt Taddy
DESCRIPTION | 9 +++------
MD5 | 6 +++---
R/dmr.R | 22 ++++++++++++++++++----
inst/CITATION | 4 ++--
4 files changed, 26 insertions(+), 15 deletions(-)
Title: Bayesian Sampling for Stick-Breaking Mixtures
Diff between Bmix versions 0.4 dated 2014-11-30 and 0.5 dated 2015-04-01
Description: This is a bare-bones implementation of sampling algorithms
for a variety of Bayesian stick-breaking (marginally DP)
mixture models, including particle learning and Gibbs sampling
for static DP mixtures, particle learning for dynamic BAR
stick-breaking, and DP mixture regression. The software is
designed to be easy to customize to suit different situations
and for experimentation with stick-breaking models. Since
particles are repeatedly copied, it is not an especially
efficient implementation.
Author: Matt Taddy
Maintainer: Matt Taddy
DESCRIPTION | 18 +++++++++---------
MD5 | 12 ++++++------
src/mix.cc | 4 ++--
src/particle.cc | 8 ++++----
src/rhelp.c | 38 +++++++++++++++++++-------------------
src/rhelp.h | 10 +++++-----
src/rvtools.c | 2 +-
7 files changed, 46 insertions(+), 46 deletions(-)
Title: An R Interface to SciDB
Diff between scidb versions 1.1-2 dated 2014-04-16 and 1.2-0 dated 2015-04-01
Description: An R interface to the SciDB array database (http://scidb.org).
Author: Paradigm4, B. W. Lewis
Maintainer: B. W. Lewis
scidb-1.1-2/scidb/inst/doc/scidb.R |only
scidb-1.1-2/scidb/inst/misc-documentation/SciDBR.list.functions |only
scidb-1.1-2/scidb/inst/misc-documentation/funs |only
scidb-1.1-2/scidb/inst/misc-documentation/scidb.pdf |only
scidb-1.1-2/scidb/man/substitute.Rd |only
scidb-1.2-0/scidb/DESCRIPTION | 14
scidb-1.2-0/scidb/MD5 | 135
scidb-1.2-0/scidb/NAMESPACE | 34
scidb-1.2-0/scidb/NEWS | 14
scidb-1.2-0/scidb/R/aggregate.R | 20
scidb-1.2-0/scidb/R/classes.R | 2
scidb-1.2-0/scidb/R/dbops.R | 210
scidb-1.2-0/scidb/R/distributions.R | 2
scidb-1.2-0/scidb/R/glm.R | 29
scidb-1.2-0/scidb/R/merge.R | 221
scidb-1.2-0/scidb/R/misc.R | 231
scidb-1.2-0/scidb/R/pkg.R | 50
scidb-1.2-0/scidb/R/redim.R |only
scidb-1.2-0/scidb/R/schema-utils.R | 127
scidb-1.2-0/scidb/R/scidb-arithmetic.R | 72
scidb-1.2-0/scidb/R/scidb-functions.R | 147
scidb-1.2-0/scidb/R/scidb-indexing-functions.R | 327
scidb-1.2-0/scidb/R/scidb-methods.R | 53
scidb-1.2-0/scidb/R/scidbdf-functions.R | 112
scidb-1.2-0/scidb/R/scidbdf-methods.R | 40
scidb-1.2-0/scidb/R/special_index.R |only
scidb-1.2-0/scidb/R/utility.R | 446 +
scidb-1.2-0/scidb/README.md | 9
scidb-1.2-0/scidb/build |only
scidb-1.2-0/scidb/inst/doc/scidb.Rnw | 679 +
scidb-1.2-0/scidb/inst/doc/scidb.pdf |binary
scidb-1.2-0/scidb/inst/misc-documentation/README | 5
scidb-1.2-0/scidb/inst/misc-documentation/Sweave.sty | 10
scidb-1.2-0/scidb/inst/misc-documentation/extra_ops |only
scidb-1.2-0/scidb/inst/misc-documentation/list.functions |only
scidb-1.2-0/scidb/inst/misc-documentation/scidb.Rnw | 427 -
scidb-1.2-0/scidb/inst/misc/image.jpg |binary
scidb-1.2-0/scidb/inst/misc/log | 3605 ----------
scidb-1.2-0/scidb/man/as.scidb.Rd | 15
scidb-1.2-0/scidb/man/bernoulli.Rd |only
scidb-1.2-0/scidb/man/bind.Rd | 2
scidb-1.2-0/scidb/man/build.Rd | 2
scidb-1.2-0/scidb/man/chunk_map.Rd |only
scidb-1.2-0/scidb/man/comparison-methods.Rd | 5
scidb-1.2-0/scidb/man/cumulate.Rd | 2
scidb-1.2-0/scidb/man/dist.Rd |only
scidb-1.2-0/scidb/man/factor_scidb.Rd |only
scidb-1.2-0/scidb/man/glm.fit.Rd | 36
scidb-1.2-0/scidb/man/index_lookup.Rd | 6
scidb-1.2-0/scidb/man/iquery.Rd | 62
scidb-1.2-0/scidb/man/is.temp.Rd |only
scidb-1.2-0/scidb/man/kmeans.Rd |only
scidb-1.2-0/scidb/man/levels_scidb.Rd |only
scidb-1.2-0/scidb/man/merge-methods.Rd | 63
scidb-1.2-0/scidb/man/na.locf-method.Rd | 7
scidb-1.2-0/scidb/man/order.Rd |only
scidb-1.2-0/scidb/man/peek.Rd |only
scidb-1.2-0/scidb/man/predict.glm_scidb.Rd | 7
scidb-1.2-0/scidb/man/project.Rd | 2
scidb-1.2-0/scidb/man/rank.Rd |only
scidb-1.2-0/scidb/man/redimension.Rd | 72
scidb-1.2-0/scidb/man/remove_old_versions.Rd |only
scidb-1.2-0/scidb/man/repart.Rd | 4
scidb-1.2-0/scidb/man/replaceNA.Rd |only
scidb-1.2-0/scidb/man/scidb-class.Rd | 10
scidb-1.2-0/scidb/man/scidb-package.Rd | 23
scidb-1.2-0/scidb/man/scidb.Rd | 1
scidb-1.2-0/scidb/man/scidb_attributes.Rd | 24
scidb-1.2-0/scidb/man/scidbconnect.Rd | 20
scidb-1.2-0/scidb/man/scidbdf-class.Rd | 23
scidb-1.2-0/scidb/man/scidbeval.Rd | 16
scidb-1.2-0/scidb/man/show_commit_log.Rd | 4
scidb-1.2-0/scidb/man/sort-methods.Rd | 13
scidb-1.2-0/scidb/man/subarray.Rd | 47
scidb-1.2-0/scidb/man/tsvd.Rd |only
scidb-1.2-0/scidb/man/unbound.Rd |only
scidb-1.2-0/scidb/src/parse.c |only
scidb-1.2-0/scidb/src/scidb.c | 142
scidb-1.2-0/scidb/tests/scidb.R | 179
scidb-1.2-0/scidb/tests/scidbdf.R | 41
scidb-1.2-0/scidb/vignettes/scidb.Rnw | 679 +
81 files changed, 3637 insertions(+), 4891 deletions(-)
Title: Steady and Unsteady Open-Channel Flow Computation
Diff between rivr versions 0.9.1 dated 2015-02-22 and 0.9.2 dated 2015-04-01
Description: A tool for undergraduate courses in open-channel hydraulics.
Provides functions for computing normal and critical depths, steady-state
water surface profiles (e.g. backwater curves) and unsteady flow
computations (e.g. flood wave routing).
Author: Michael C Koohafkan [aut, cre]
Maintainer: Michael C Koohafkan
rivr-0.9.1/rivr/README.md |only
rivr-0.9.2/rivr/DESCRIPTION | 11
rivr-0.9.2/rivr/MD5 | 35 +-
rivr-0.9.2/rivr/NAMESPACE | 1
rivr-0.9.2/rivr/R/RcppExports.R | 2
rivr-0.9.2/rivr/R/graduallyvariedflow_v2.r | 74 ++++--
rivr-0.9.2/rivr/R/route_wave_v4.r | 22 +
rivr-0.9.2/rivr/build/vignette.rds |binary
rivr-0.9.2/rivr/inst/doc/quickstart.R | 2
rivr-0.9.2/rivr/inst/doc/quickstart.Rmd | 2
rivr-0.9.2/rivr/inst/doc/quickstart.html | 3
rivr-0.9.2/rivr/man/compute_profile.Rd | 8
rivr-0.9.2/rivr/man/froude.Rd | 2
rivr-0.9.2/rivr/man/rivr-package.Rd | 8
rivr-0.9.2/rivr/man/route_wave.Rd | 2
rivr-0.9.2/rivr/man/waterolympics.Rd | 6
rivr-0.9.2/rivr/src/RcppExports.cpp | 264 +++++++++-------------
rivr-0.9.2/rivr/src/rivmech_characteristic_v7.cpp | 2
rivr-0.9.2/rivr/vignettes/quickstart.Rmd | 2
19 files changed, 226 insertions(+), 220 deletions(-)
Title: Nonparametric Boundary Regression
Diff between npbr versions 1.0 dated 2013-12-11 and 1.1 dated 2015-04-01
Description: A variety of functions for the best known and most innovative approaches to nonparametric boundary estimation. The selected methods are concerned with empirical, smoothed, unrestricted as well as constrained fits under both separate and multiple shape constraints. They cover robust approaches to outliers as well as data envelopment techniques based on piecewise polynomials, splines, local linear fitting, extreme values and kernel smoothing. The package also seamlessly allows for Monte Carlo comparisons among these different estimation methods. Its use is illustrated via a number of empirical applications and simulated examples.
Author: Abdelaati Daouia
Maintainer: Thibault Laurent
npbr-1.0/npbr/R/quad_spline_est_kn.R |only
npbr-1.0/npbr/man/quad_spline_est_kn.Rd |only
npbr-1.1/npbr/DESCRIPTION | 17
npbr-1.1/npbr/MD5 | 76
npbr-1.1/npbr/NAMESPACE | 3
npbr-1.1/npbr/R/cub_spline_est.r |only
npbr-1.1/npbr/R/cub_spline_kn.r |only
npbr-1.1/npbr/R/dfs_momt.r |only
npbr-1.1/npbr/R/dfs_pick.r |only
npbr-1.1/npbr/R/dfs_pwm.r |only
npbr-1.1/npbr/R/kern_smooth.R |only
npbr-1.1/npbr/R/kern_smooth_bw.R |only
npbr-1.1/npbr/R/kopt_momt_pick.r |only
npbr-1.1/npbr/R/loc_est.R | 13
npbr-1.1/npbr/R/loc_est_bw.R | 6
npbr-1.1/npbr/R/loc_max.r |only
npbr-1.1/npbr/R/mopt_pwm.r |only
npbr-1.1/npbr/R/pick_est.r |only
npbr-1.1/npbr/R/poly_degree.r |only
npbr-1.1/npbr/R/quad_spline_est.R | 51
npbr-1.1/npbr/R/quad_spline_kn.R |only
npbr-1.1/npbr/R/rho_momt_pick.r |only
npbr-1.1/npbr/R/rho_pwm.r |only
npbr-1.1/npbr/R/zzz.r |only
npbr-1.1/npbr/build/vignette.rds |binary
npbr-1.1/npbr/data/air.rda |only
npbr-1.1/npbr/data/post.rda |only
npbr-1.1/npbr/data/records.rda |only
npbr-1.1/npbr/inst/doc/ex-npbr.R | 1205 +++++++++++++--
npbr-1.1/npbr/inst/doc/ex-npbr.pdf |binary
npbr-1.1/npbr/inst/doc/ex-npbr.rnw | 2496 +++++++++++++++++++++++++++-----
npbr-1.1/npbr/man/air.rd |only
npbr-1.1/npbr/man/cub_spline_est.rd |only
npbr-1.1/npbr/man/cub_spline_kn.rd |only
npbr-1.1/npbr/man/dea_est.Rd | 40
npbr-1.1/npbr/man/dfs_momt.rd |only
npbr-1.1/npbr/man/dfs_pick.rd |only
npbr-1.1/npbr/man/dfs_pwm.rd |only
npbr-1.1/npbr/man/green.Rd | 12
npbr-1.1/npbr/man/kern_smooth.Rd |only
npbr-1.1/npbr/man/kern_smooth_bw.Rd |only
npbr-1.1/npbr/man/kopt_momt_pick.rd |only
npbr-1.1/npbr/man/loc_est.Rd | 75
npbr-1.1/npbr/man/loc_est_bw.Rd | 51
npbr-1.1/npbr/man/loc_max.rd |only
npbr-1.1/npbr/man/mopt_pwm.rd |only
npbr-1.1/npbr/man/npbr-package.Rd | 127 +
npbr-1.1/npbr/man/nuclear.Rd | 14
npbr-1.1/npbr/man/pick_est.rd |only
npbr-1.1/npbr/man/poly_degree.rd |only
npbr-1.1/npbr/man/poly_est.Rd | 40
npbr-1.1/npbr/man/post.Rd |only
npbr-1.1/npbr/man/quad_spline_est.Rd | 89 -
npbr-1.1/npbr/man/quad_spline_kn.Rd |only
npbr-1.1/npbr/man/records.Rd |only
npbr-1.1/npbr/man/rho_momt_pick.rd |only
npbr-1.1/npbr/man/rho_pwm.rd |only
npbr-1.1/npbr/src |only
npbr-1.1/npbr/vignettes/ex-npbr.rnw | 2496 +++++++++++++++++++++++++++-----
59 files changed, 5748 insertions(+), 1063 deletions(-)
Title: Nested Association Mapping Analysis
Diff between NAM versions 1.1 dated 2015-03-11 and 1.1.2 dated 2015-04-01
Description: Designed for association studies in nested association mapping (NAM) panels, but also handling biparental and random panels. It includes functions for genome-wide associations mapping of multiple populations, marker quality control, solving mixed models and finding variance components through REML and Gibbs sampling.
Author: Alencar Xavier, William Muir, Katy Rainey, Tiago Pimenta, Qishan Wang, Shizhong Xu.
Maintainer: Alencar Xavier
DESCRIPTION | 8
MD5 | 28 -
R/gibbs.R | 382 ++++++++++----------
R/gwas.R | 973 ++++++++++++++++++++++++++---------------------------
R/gwas2.R | 722 +++++++++++++++++++--------------------
R/manhattan.R | 66 +--
R/reml.R | 2
man/NAM-package.Rd | 6
man/gibbs.Rd | 25 -
man/gwas.Rd | 126 +++---
man/manhattan.Rd | 79 ++--
man/reference.Rd | 66 +--
man/snpH2.Rd | 66 +--
man/snpQC.Rd | 82 ++--
man/tpod.Rd | 42 +-
15 files changed, 1339 insertions(+), 1334 deletions(-)
More information about HarmonicRegression at CRAN
Permanent link
Title: Global Value Chains Decomposition (Wang-Wei-Zhu and Leontief)
Diff between decompr versions 2.1.0 dated 2015-02-03 and 3.0.0 dated 2015-04-01
Description: Two Global Value Chains decompositions are implemented. Firstly,
the Wang-Wei-Zhu (Wang, Wei, and Zhu 2013) algorithm splits bilateral gross
exports into 16 value added components. Secondly, the Leontief decomposition
(default) derives the value added origin of exports by country and
industry, which is also based on Wang, Wei, and Zhu (2013).
Author: Bastiaan Quast [aut, cre],
Fei Wang [aut],
Victor Kummritz [aut]
Maintainer: Bastiaan Quast
decompr-2.1.0/decompr/R/vertical_specialisation.R |only
decompr-2.1.0/decompr/data/wiod.rda |only
decompr-2.1.0/decompr/man/final_demand.Rd |only
decompr-2.1.0/decompr/man/industry_names.Rd |only
decompr-2.1.0/decompr/man/intermediate_demand.Rd |only
decompr-2.1.0/decompr/man/kung_fu.Rd |only
decompr-2.1.0/decompr/man/output.Rd |only
decompr-2.1.0/decompr/man/region_names.Rd |only
decompr-2.1.0/decompr/man/vertical_specialisation.Rd |only
decompr-3.0.0/decompr/DESCRIPTION | 21
decompr-3.0.0/decompr/MD5 | 67 -
decompr-3.0.0/decompr/NAMESPACE | 18
decompr-3.0.0/decompr/NEWS | 262 +++----
decompr-3.0.0/decompr/R/decomp.R | 187 ++---
decompr-3.0.0/decompr/R/decompr.R | 119 +--
decompr-3.0.0/decompr/R/leontief.R | 188 ++---
decompr-3.0.0/decompr/R/leontief_output.R |only
decompr-3.0.0/decompr/R/load_tables.R | 94 +-
decompr-3.0.0/decompr/R/load_tables_vectors.R | 438 ++++++------
decompr-3.0.0/decompr/R/wwz.R | 675 +++++++++----------
decompr-3.0.0/decompr/README.md | 106 +-
decompr-3.0.0/decompr/build |only
decompr-3.0.0/decompr/data/leather.rda |binary
decompr-3.0.0/decompr/inst/CITATION | 34
decompr-3.0.0/decompr/inst/doc |only
decompr-3.0.0/decompr/man/countries.Rd | 20
decompr-3.0.0/decompr/man/decomp.Rd | 170 ++--
decompr-3.0.0/decompr/man/decompr.Rd | 43 -
decompr-3.0.0/decompr/man/final.Rd | 20
decompr-3.0.0/decompr/man/industries.Rd | 20
decompr-3.0.0/decompr/man/inter.Rd | 20
decompr-3.0.0/decompr/man/leontief.Rd | 82 +-
decompr-3.0.0/decompr/man/leontief_output.Rd | 82 +-
decompr-3.0.0/decompr/man/load_tables.Rd | 66 -
decompr-3.0.0/decompr/man/load_tables_vectors.Rd | 104 +-
decompr-3.0.0/decompr/man/out.Rd | 20
decompr-3.0.0/decompr/man/wwz.Rd | 87 +-
decompr-3.0.0/decompr/tests |only
decompr-3.0.0/decompr/vignettes |only
39 files changed, 1449 insertions(+), 1494 deletions(-)
Title: Simulation of Ordinal and Discrete Variables with Given
Correlation Matrix and Marginal Distributions
Diff between GenOrd versions 1.2.0 dated 2014-04-01 and 1.3.0 dated 2015-04-01
Description: A gaussian copula based procedure is implemented for generating samples from ordinal/discrete random variables with pre-specified correlation matrix and marginal distributions.
Author: Alessandro Barbiero, Pier Alda Ferrari
Maintainer: Alessandro Barbiero
DESCRIPTION | 16 ++++------
MD5 | 20 ++++++------
R/contord.R | 77 ++++++++++++++++++++++++--------------------------
R/corrcheck.R | 1
R/ordcont.R | 15 +++++----
R/ordsample.R | 24 ++++++++-------
man/GenOrd-package.Rd | 14 +++++----
man/contord.Rd | 19 ++++++------
man/corrcheck.Rd | 21 +++++++------
man/ordcont.Rd | 40 ++++++++++++-------------
man/ordsample.Rd | 45 ++++++++++++++---------------
11 files changed, 148 insertions(+), 144 deletions(-)
Title: Store Objects on Disk Automatically
Diff between track versions 1.1.7 dated 2015-03-14 and 1.1.8 dated 2015-04-01
Description: Automatically stores objects in files on disk
so that files are rewritten when objects are changed, and
so that objects are accessible but do not occupy memory
until they are accessed. Keeps track of times when objects
are created and modified, and caches some basic
characteristics of objects to allow for fast summaries of
objects. Also provides a command history mechanism that
saves the last command to a history file after each
command completes.
Author: Tony Plate
Maintainer: Tony Plate
DESCRIPTION | 8 ++++----
MD5 | 10 +++++-----
NEWS | 4 ++++
tests/runtests.R | 4 +++-
tests/track.auto.rescan.Rt | 4 ++--
vignettes/track.Rnw | 6 ++++++
6 files changed, 24 insertions(+), 12 deletions(-)
Title: Date Calculations and Manipulation
Diff between TimeWarp versions 1.0.11 dated 2015-03-07 and 1.0.12 dated 2015-04-01
Description: Date sequence, relative date calculations, and date manipulation with business days
and holidays. Works with Date and POSIXt classes.
Author: Tony Plate, Jeffrey Horner, Lars Hansen
Maintainer: Tony Plate
DESCRIPTION | 8 ++++----
MD5 | 4 ++--
tests/holidays.Rt | 3 ++-
3 files changed, 8 insertions(+), 7 deletions(-)
Title: Functions to Calculate Common Laterality Statistics in
Primatology
Diff between Laterality versions 0.9.2 dated 2013-07-08 and 0.9.3 dated 2015-04-01
Description: Calculates and plots Handedness index (HI), absolute HI, mean HI and z-score which are commonly used indexes for the study of hand preference (laterality) in non-human primates.
Author: Borel A., Pouydebat E., Reghem E.
Maintainer: Antony Borel
DESCRIPTION | 19 +-
MD5 | 38 ++---
NAMESPACE | 33 +++--
R/HImeanindabs.R | 94 +++++++-------
R/HIndivabs.R | 116 ++++++++---------
R/laterAFCM.R | 79 +++++------
R/lvisAFCM.R | 131 ++++++++++---------
R/visAFCM.R | 75 +++++------
man/HImeanact.Rd | 242 ++++++++++++++++++------------------
man/HImeanactabs.Rd | 232 +++++++++++++++++------------------
man/HImeanind.Rd | 238 ++++++++++++++++++------------------
man/HImeanindabs.Rd | 232 +++++++++++++++++------------------
man/HIndiv.Rd | 234 +++++++++++++++++------------------
man/HIndivabs.Rd | 236 +++++++++++++++++------------------
man/Laterality-package.Rd | 182 +++++++++++++--------------
man/later.Rd | 164 ++++++++++++------------
man/laterAFCM.Rd | 175 ++++++++++++--------------
man/laterhist.Rd | 188 ++++++++++++++--------------
man/lvisAFCM.Rd | 303 +++++++++++++++++++++-------------------------
man/visAFCM.Rd | 208 +++++++++++++++----------------
20 files changed, 1597 insertions(+), 1622 deletions(-)
More information about FlexParamCurve at CRAN
Permanent link
Title: Spatial Areal Unit Modelling
Diff between CARBayes versions 4.0 dated 2014-12-16 and 4.1 dated 2015-04-01
Description: Implements a class of spatial generalised linear mixed models for areal unit data, with inference in a Bayesian setting using Markov chain Monte Carlo (McMC) simulation. The spatial autocorrelation is modelled by a set of random effects, which are assigned a conditional autoregressive (CAR) prior distribution. A number of different CAR priors are available for the random effects, and full details are given in the vignette accompanying this package. The initial creation of this package was supported by the Economic and Social Research Council (ESRC) grant RES-000-22-4256, and on-going development is supported by the Engineering and Physical Science Research Council (EPSRC) grant EP/J017442/1.
Author: Duncan Lee
Maintainer: Duncan Lee
CARBayes-4.0/CARBayes/data |only
CARBayes-4.0/CARBayes/man/spatialhousedata.Rd |only
CARBayes-4.0/CARBayes/man/spatialrespdata.Rd |only
CARBayes-4.1/CARBayes/DESCRIPTION | 14 -
CARBayes-4.1/CARBayes/MD5 | 105 +++----
CARBayes-4.1/CARBayes/NAMESPACE | 3
CARBayes-4.1/CARBayes/R/RcppExports.R | 1
CARBayes-4.1/CARBayes/R/S.CARbym.R | 2
CARBayes-4.1/CARBayes/R/S.CARcluster.R | 2
CARBayes-4.1/CARBayes/R/S.CARdissimilarity.R | 2
CARBayes-4.1/CARBayes/R/S.CARiar.R | 2
CARBayes-4.1/CARBayes/R/S.CARleroux.R | 2
CARBayes-4.1/CARBayes/R/S.independent.R | 2
CARBayes-4.1/CARBayes/R/binomial.bymCAR.R | 24 +
CARBayes-4.1/CARBayes/R/binomial.clusterCAR.R | 44 ++-
CARBayes-4.1/CARBayes/R/binomial.dissimilarityCAR.R | 22 +
CARBayes-4.1/CARBayes/R/binomial.iarCAR.R | 24 +
CARBayes-4.1/CARBayes/R/binomial.independent.R | 22 +
CARBayes-4.1/CARBayes/R/binomial.lerouxCAR.R | 24 +
CARBayes-4.1/CARBayes/R/combine.data.shapefile.R | 128 +++++----
CARBayes-4.1/CARBayes/R/gaussian.bymCAR.R | 24 +
CARBayes-4.1/CARBayes/R/gaussian.clusterCAR.R | 40 +-
CARBayes-4.1/CARBayes/R/gaussian.dissimilarityCAR.R | 22 +
CARBayes-4.1/CARBayes/R/gaussian.iarCAR.R | 24 +
CARBayes-4.1/CARBayes/R/gaussian.independent.R | 22 +
CARBayes-4.1/CARBayes/R/gaussian.lerouxCAR.R | 24 +
CARBayes-4.1/CARBayes/R/highlight.borders.R | 17 -
CARBayes-4.1/CARBayes/R/poisson.bymCAR.R | 24 +
CARBayes-4.1/CARBayes/R/poisson.clusterCAR.R | 46 ++-
CARBayes-4.1/CARBayes/R/poisson.clusterCARagg.R | 42 +--
CARBayes-4.1/CARBayes/R/poisson.dissimilarityCAR.R | 22 +
CARBayes-4.1/CARBayes/R/poisson.iarCAR.R | 24 +
CARBayes-4.1/CARBayes/R/poisson.independent.R | 22 +
CARBayes-4.1/CARBayes/R/poisson.lerouxCAR.R | 24 +
CARBayes-4.1/CARBayes/build/vignette.rds |binary
CARBayes-4.1/CARBayes/inst/doc/CARBayesvignette.R | 108 ++++---
CARBayes-4.1/CARBayes/inst/doc/CARBayesvignette.Rnw | 263 ++++++++++---------
CARBayes-4.1/CARBayes/inst/doc/CARBayesvignette.pdf |binary
CARBayes-4.1/CARBayes/man/CARBayes-package.Rd | 109 +++----
CARBayes-4.1/CARBayes/man/S.CARbym.Rd | 70 +++--
CARBayes-4.1/CARBayes/man/S.CARcluster.Rd | 84 +++---
CARBayes-4.1/CARBayes/man/S.CARdissimilarity.Rd | 78 +++--
CARBayes-4.1/CARBayes/man/S.CARiar.Rd | 70 +++--
CARBayes-4.1/CARBayes/man/S.CARleroux.Rd | 71 +++--
CARBayes-4.1/CARBayes/man/S.independent.Rd | 62 ++--
CARBayes-4.1/CARBayes/man/combine.data.shapefile.Rd | 26 +
CARBayes-4.1/CARBayes/man/highlight.borders.Rd | 34 +-
CARBayes-4.1/CARBayes/man/print.carbayes.Rd | 9
CARBayes-4.1/CARBayes/man/summarise.lincomb.Rd | 30 +-
CARBayes-4.1/CARBayes/man/summarise.samples.Rd | 28 +-
CARBayes-4.1/CARBayes/src/CARBayes.cpp | 1
CARBayes-4.1/CARBayes/src/RcppExports.cpp | 1
CARBayes-4.1/CARBayes/vignettes/CARBayesvignette.Rnw | 263 ++++++++++---------
CARBayes-4.1/CARBayes/vignettes/jss996.bib | 22 -
54 files changed, 1252 insertions(+), 877 deletions(-)