Title: Interface Utilities, Model Templates, Parallel Computing Methods
and Additional Distributions for MCMC Models in JAGS
Description: User-friendly interface utilities for MCMC models via
Just Another Gibbs Sampler (JAGS), facilitating the use of parallel
(or distributed) processors for multiple chains, automated control
of convergence and sample length diagnostics, and evaluation of the
performance of a model using drop-k validation or against simulated
data. Template model specifications can be generated using a standard
lme4-style formula interface to assist users less familiar with the
BUGS syntax. A JAGS extension module provides additional distributions
including the Pareto family of distributions, the DuMouchel prior and
the half-Cauchy prior.
Author: Matthew Denwood [aut, cre],
Martyn Plummer [cph] (Copyright holder of the code in
/src/distributions/jags, src/distributions/DPar1.*, configure.ac,
and original copyright holder of some modified code where
indicated)
Maintainer: Matthew Denwood
Diff between runjags versions 2.0.1-2 dated 2015-04-12 and 2.0.1-4 dated 2015-04-14
DESCRIPTION | 12 +-- MD5 | 14 +-- build/vignette.rds |binary inst/doc/UserGuide.pdf |binary inst/doc/quickjags.R | 9 -- inst/doc/quickjags.Rmd | 30 ++------ inst/doc/quickjags.html | 171 +++++++++++++++++++----------------------------- vignettes/quickjags.Rmd | 30 ++------ 8 files changed, 99 insertions(+), 167 deletions(-)
Title: BInary Longitudinal Data
Description: Performs logistic regression for binary longitudinal
data, allowing for serial dependence among observations from a given
individual and a random intercept term. Estimation is via maximization
of the exact likelihood of a suitably defined model. Missing values and
unbalanced data are allowed, with some restrictions.
Author: M. Helena Gon�alves, M. Salom� Cabral and Adelchi Azzalini,
apart from a set of Fortran-77 subroutines written by R. Piessens
and E. de Doncker, belonging to the suite "Quadpack".
Maintainer: M. Helena Gon�alves
Diff between bild versions 1.1-3 dated 2013-02-18 and 1.1-5 dated 2015-04-14
bild-1.1-3/bild/INDEX |only bild-1.1-3/bild/history.txt |only bild-1.1-5/bild/DESCRIPTION | 27 ++--- bild-1.1-5/bild/MD5 | 29 ++--- bild-1.1-5/bild/NEWS |only bild-1.1-5/bild/inst/CITATION | 156 +++++++++++++++++++----------- bild-1.1-5/bild/man/airpollution.rd | 9 - bild-1.1-5/bild/man/anova-methods.Rd | 30 +++-- bild-1.1-5/bild/man/bild-class.Rd | 2 bild-1.1-5/bild/man/bild-package.Rd | 4 bild-1.1-5/bild/man/bild.Rd | 30 +++-- bild-1.1-5/bild/man/bildIntegrate.Rd | 12 +- bild-1.1-5/bild/man/locust.rd | 7 - bild-1.1-5/bild/man/muscatine.rd | 4 bild-1.1-5/bild/man/plot-methods.Rd | 23 ++-- bild-1.1-5/bild/man/summary-methods.Rd | 4 bild-1.1-5/bild/man/summary.bild-class.Rd | 4 17 files changed, 198 insertions(+), 143 deletions(-)
Title: Tools for the Analysis of Air Pollution Data
Description: Tools to analyse, interpret and understand air
pollution data. Data are typically hourly time series
and both monitoring data and dispersion model output
can be analysed. Many functions can also be applied to
other data, including meteorological and traffic data.
Author: David Carslaw [aut, cre],
Karl Ropkins [aut]
Maintainer: David Carslaw
Diff between openair versions 1.1-5 dated 2015-02-09 and 1.5 dated 2015-04-14
DESCRIPTION | 16 MD5 | 185 +- NAMESPACE | 170 +- NEWS |only R/GoogleMapsPlot.R | 1894 ++++++++++++++--------------- R/TaylorDiagram.R | 1278 ++++++++++--------- R/TheilSen.R | 1172 +++++++++--------- R/airbaseFindCode.R | 270 ++-- R/airbaseInfo.R | 88 - R/airbaseSplice.R | 180 +- R/airbaseStats.R | 674 +++++----- R/aqStats.R | 48 R/calcFno2.R | 586 ++++----- R/calendarPlot.R | 1020 +++++++-------- R/corPlot.R | 800 ++++++------ R/cutData.R | 16 R/getMeta.R | 14 R/import.R | 392 +++--- R/importADMS.R | 1974 +++++++++++++++--------------- R/importAirbase.R | 270 ++-- R/importKCL.R | 1191 +++++++++--------- R/linearRelation.R | 816 ++++++------ R/openair-package.R | 180 +- R/percentileRose.R | 1112 ++++++++--------- R/polarAnnulus.R | 1470 +++++++++++----------- R/polarCluster.R | 708 +++++----- R/polarFreq.R | 922 +++++++------- R/polarPlot.R | 1746 +++++++++++++------------- R/scatterPlot.R | 2930 ++++++++++++++++++++++----------------------- R/smoothTrend.R | 954 +++++++------- R/timeAverage.R | 1012 +++++++-------- R/timePlot.R | 1242 +++++++++---------- R/timeVariation.R | 2067 ++++++++++++++++--------------- R/trajLevel.R | 889 ++++++------- R/trajPlot.R | 624 ++++----- R/trendLevel.R | 1202 +++++++++--------- R/utilities.R | 2030 +++++++++++++++---------------- R/windRose.R | 1482 +++++++++++----------- README.md | 326 ++--- data/mydata.RData |binary inst/CITATION | 27 man/GoogleMapsPlot.Rd | 438 +++--- man/TaylorDiagram.Rd | 550 ++++---- man/TheilSen.Rd | 546 ++++---- man/airbaseFindCode.Rd | 172 +- man/airbaseInfo.Rd | 84 - man/airbaseSplice.Rd | 122 - man/airbaseStats.Rd | 536 ++++---- man/aqStats.Rd | 194 +- man/calcFno2.Rd | 224 +-- man/calcPercentile.Rd | 130 - man/calendarPlot.Rd | 404 +++--- man/conditionalEval.Rd | 398 +++--- man/conditionalQuantile.Rd | 330 ++--- man/corPlot.Rd | 306 ++-- man/cutData.Rd | 318 ++-- man/drawOpenKey.Rd | 366 ++--- man/import.Rd | 280 ++-- man/importADMS.Rd | 318 ++-- man/importAURN.Rd | 670 +++++----- man/importAURNCsv.Rd | 356 ++--- man/importAirbase.Rd | 166 +- man/importKCL.Rd | 972 +++++++------- man/importMeta.Rd | 138 +- man/importSAQN.Rd | 356 ++--- man/importTraj.Rd | 300 ++-- man/kernelExceed.Rd | 304 ++-- man/linearRelation.Rd | 292 ++-- man/modStats.Rd | 298 ++-- man/mydata.Rd | 100 - man/openColours.Rd | 176 +- man/openair.Rd | 190 +- man/percentileRose.Rd | 386 ++--- man/polarAnnulus.Rd | 524 ++++---- man/polarCluster.Rd | 360 ++--- man/polarFreq.Rd | 432 +++--- man/polarPlot.Rd | 810 ++++++------ man/quickText.Rd | 90 - man/rollingMean.Rd | 130 - man/scatterPlot.Rd | 708 +++++----- man/selectByDate.Rd | 166 +- man/selectRunning.Rd | 114 - man/smoothTrend.Rd | 448 +++--- man/splitByDate.Rd | 84 - man/summaryPlot.Rd | 324 ++-- man/timeAverage.Rd | 392 +++--- man/timePlot.Rd | 582 ++++---- man/timeProp.Rd | 312 ++-- man/timeVariation.Rd | 615 ++++----- man/trajCluster.Rd | 270 ++-- man/trajLevel.Rd | 522 ++++---- man/trajPlot.Rd | 318 ++-- man/trendLevel.Rd | 402 +++--- man/windRose.Rd | 585 ++++---- 94 files changed, 26342 insertions(+), 26243 deletions(-)
Title: Invariant Causal Prediction
Description: Confidence intervals for causal effects, using data collected in different experimental or environmental conditions. Hidden variables can be included in the model with a more experimental version.
Author: Nicolai Meinshausen
Maintainer: Nicolai Meinshausen
Diff between InvariantCausalPrediction versions 0.3 dated 2015-04-13 and 0.3-1 dated 2015-04-14
InvariantCausalPrediction-0.3-1/InvariantCausalPrediction/DESCRIPTION | 8 ++++---- InvariantCausalPrediction-0.3-1/InvariantCausalPrediction/MD5 | 8 ++++---- InvariantCausalPrediction-0.3-1/InvariantCausalPrediction/NAMESPACE | 2 +- InvariantCausalPrediction-0.3-1/InvariantCausalPrediction/R/hiddenICE.R |only InvariantCausalPrediction-0.3-1/InvariantCausalPrediction/man/hiddenICE.Rd |only InvariantCausalPrediction-0.3/InvariantCausalPrediction/R/feedbackNetwork.R |only InvariantCausalPrediction-0.3/InvariantCausalPrediction/man/feedbackNetwork.Rd |only 7 files changed, 9 insertions(+), 9 deletions(-)
More information about InvariantCausalPrediction at CRAN
Permanent link
Title: Flexible Parametric Survival and Multi-State Models
Description: Flexible parametric models for time-to-event data, including the Royston-Parmar spline model, generalized gamma and generalized F distributions. Any user-defined parametric distribution can be fitted, given at least an R function defining the probability density or hazard. There are also tools for fitting and predicting from fully parametric multi-state models.
Author: Christopher Jackson
Maintainer: Christopher Jackson
Diff between flexsurv versions 0.5 dated 2014-09-22 and 0.6 dated 2015-04-14
DESCRIPTION | 16 MD5 | 65 NAMESPACE | 7 R/Gompertz.R | 1 R/Llogis.R |only R/flexsurvreg.R | 1858 ++++++++++++----------- R/mstate.R | 184 +- R/utils.R | 17 build/vignette.rds |binary inst/NEWS | 41 inst/doc/flexsurv-examples.R | 48 inst/doc/flexsurv-examples.pdf |binary inst/doc/flexsurv.R | 489 ++---- inst/doc/flexsurv.pdf |binary man/Llogis.Rd |only man/flexsurvreg.Rd | 17 man/flexsurvspline.Rd | 10 man/msfit.flexsurvreg.Rd | 39 man/pars.fmsm.Rd |only man/pmatrix.fs.Rd | 7 man/pmatrix.simfs.Rd | 9 man/sim.fmsm.Rd | 17 man/summary.flexsurvreg.Rd | 11 man/totlos.fs.Rd | 7 man/totlos.simfs.Rd | 9 tests/testthat/test_custom.R | 54 tests/testthat/test_deriv.R | 7 tests/testthat/test_flexsurvreg.R | 47 tests/testthat/test_mstate.R | 78 tests/testthat/test_outputs.R | 4 tests/testthat/test_spline.R | 7 tests/testthat/test_utils.R | 38 vignettes/flexsurv-examples.Rnw | 78 vignettes/flexsurv.Rnw | 3039 ++++++++++++++++++++------------------ vignettes/flexsurv.bib | 224 +- 35 files changed, 3575 insertions(+), 2853 deletions(-)
Title: Sample Size Estimation Functions for Cluster Randomized Trials
Description: Sample size estimation in cluster (group) randomized trials. Contains traditional power-based methods, empirical smoothing (Rotondi and Donner, 2009), and updated meta-analysis techniques (Rotondi and Donner, 2012).
Author: Michael A Rotondi
Maintainer: Michael A Rotondi
Diff between CRTSize versions 0.4 dated 2015-02-02 and 1.0 dated 2015-04-14
DESCRIPTION | 10 +++++----- MD5 | 10 +++++----- R/n4incidence.R | 13 ++++++++----- R/n4means.R | 4 ++-- R/n4props.R | 2 +- man/n4meansMeta.Rd | 4 ++-- 6 files changed, 23 insertions(+), 20 deletions(-)
Title: Manipulations of Triangular Meshes Based on the VCGLIB API
Description: Operations on triangular meshes based on VCGLIB. This package
integrates nicely with the R-package "rgl" to render the meshes processed
by Rvcg. The Visualization and Computer Graphics Library (VCG for short) is
an open source portable C++ templated library for manipulation, processing
and displaying with OpenGL of triangle and tetrahedral meshes. The library,
composed by more than 100k lines of code, is released under the GPL
license, and it is the base of most of the software tools of the Visual
Computing Lab of the Italian National Research Council Institute ISTI
(http://vcg.isti.cnr.it), like metro and MeshLab.
The vcglib source is pulled from
trunk (svn://svn.code.sf.net/p/vcg/code/trunk/vcglib) and patched to work
with options determined by the configure script as well as
to work with the header files included by RcppEigen.
Author: Stefan Schlager; the authors of VCGLIB for the included version of the
code
Maintainer: Stefan Schlager
Diff between Rvcg versions 0.10.1 dated 2014-12-22 and 0.11 dated 2015-04-14
Rvcg-0.10.1/Rvcg/src/vcglib/vcg/space/index/index2D |only Rvcg-0.10.1/Rvcg/src/vcglib/wrap/miq |only Rvcg-0.11/Rvcg/DESCRIPTION | 8 Rvcg-0.11/Rvcg/MD5 | 342 Rvcg-0.11/Rvcg/NAMESPACE | 2 Rvcg-0.11/Rvcg/R/Rvcg-package.R | 4 Rvcg-0.11/Rvcg/R/vcgClost.r | 1 Rvcg-0.11/Rvcg/R/vcgKDtree.r | 11 Rvcg-0.11/Rvcg/inst/NEWS.Rd | 18 Rvcg-0.11/Rvcg/man/Rvcg-package.Rd | 7 Rvcg-0.11/Rvcg/man/dummyhead.Rd | 3 Rvcg-0.11/Rvcg/man/humface.Rd | 3 Rvcg-0.11/Rvcg/man/meshintegrity.Rd | 3 Rvcg-0.11/Rvcg/man/setRays.Rd | 3 Rvcg-0.11/Rvcg/man/vcgBary.Rd | 3 Rvcg-0.11/Rvcg/man/vcgBorder.Rd | 3 Rvcg-0.11/Rvcg/man/vcgClean.Rd | 3 Rvcg-0.11/Rvcg/man/vcgClost.Rd | 4 Rvcg-0.11/Rvcg/man/vcgClostKD.Rd | 3 Rvcg-0.11/Rvcg/man/vcgCurve.Rd | 3 Rvcg-0.11/Rvcg/man/vcgGetEdge.Rd | 3 Rvcg-0.11/Rvcg/man/vcgImport.Rd | 3 Rvcg-0.11/Rvcg/man/vcgIsolated.Rd | 3 Rvcg-0.11/Rvcg/man/vcgIsosurface.Rd | 3 Rvcg-0.11/Rvcg/man/vcgKDtree.Rd | 3 Rvcg-0.11/Rvcg/man/vcgMeshres.Rd | 3 Rvcg-0.11/Rvcg/man/vcgNonBorderEdge.Rd | 3 Rvcg-0.11/Rvcg/man/vcgPlyRead.Rd | 3 Rvcg-0.11/Rvcg/man/vcgPlyWrite.Rd | 3 Rvcg-0.11/Rvcg/man/vcgQEdecim.Rd | 3 Rvcg-0.11/Rvcg/man/vcgRaySearch.Rd | 3 Rvcg-0.11/Rvcg/man/vcgSample.Rd | 3 Rvcg-0.11/Rvcg/man/vcgSmooth.Rd | 3 Rvcg-0.11/Rvcg/man/vcgStlWrite.Rd | 3 Rvcg-0.11/Rvcg/man/vcgUniformRemesh.Rd | 3 Rvcg-0.11/Rvcg/man/vcgUpdateNormals.Rd | 3 Rvcg-0.11/Rvcg/man/vcgVFadj.Rd | 3 Rvcg-0.11/Rvcg/src/Rclean.cpp | 8 Rvcg-0.11/Rvcg/src/Rkdtree.cpp | 37 Rvcg-0.11/Rvcg/src/Runiform_resample.cpp | 2 Rvcg-0.11/Rvcg/src/RvcgKD.h | 11 Rvcg-0.11/Rvcg/src/Volume.h | 2 Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/algorithms/autoalign_4pcs.h | 33 Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/algorithms/clean.h | 2039 ++--- Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/algorithms/closest.h | 64 Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/algorithms/clustering.h | 34 Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/algorithms/create/advancing_front.h | 47 Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/algorithms/create/ball_pivoting.h | 286 Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/algorithms/create/marching_cubes.h | 10 Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/algorithms/create/mc_trivial_walker.h | 101 Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/algorithms/create/platonic.h | 221 Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/algorithms/create/resampler.h | 1127 +-- Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/algorithms/geodesic.h | 20 Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/algorithms/harmonic.h | 490 - Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/algorithms/hole.h | 8 Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/algorithms/implicit_smooth.h |only Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/algorithms/inside.h | 43 Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/algorithms/local_optimization/tri_edge_collapse_quadric.h | 384 - Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/algorithms/local_optimization/tri_edge_collapse_quadric_tex.h | 10 Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/algorithms/local_optimization/tri_edge_flip.h | 968 +- Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/algorithms/mesh_assert.h |only Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/algorithms/mesh_to_matrix.h |only Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/algorithms/parametrization/distortion.h | 463 - Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/algorithms/parametrization/poisson_solver.h | 2 Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/algorithms/parametrization/tangent_field_operators.h | 1515 ++-- Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/algorithms/point_sampling.h | 265 Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/algorithms/pointcloud_normal.h | 49 Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/algorithms/polygon_polychord_collapse.h | 889 +- Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/algorithms/polygon_support.h | 80 Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/algorithms/quadrangulator.h |only Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/algorithms/refine.h | 1 Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/algorithms/refine_loop.h | 942 +- Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/algorithms/smooth.h | 147 Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/algorithms/stat.h | 6 Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/algorithms/symmetry.h | 49 Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/algorithms/update/color.h | 115 Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/algorithms/update/curvature.h | 36 Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/algorithms/update/curvature_fitting.h | 464 - Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/algorithms/update/flag.h | 80 Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/algorithms/update/normal.h | 41 Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/algorithms/update/quality.h | 20 Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/algorithms/update/selection.h | 3 Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/algorithms/voronoi_processing.h | 113 Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/algorithms/voronoi_volume_sampling.h | 244 Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/allocate.h | 2475 +++--- Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/append.h | 66 Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/base.h | 82 Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/complex.h | 1 Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/exception.h | 17 Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/used_types.h | 1 Rvcg-0.11/Rvcg/src/vcglib/vcg/container/simple_temporary_data.h | 20 Rvcg-0.11/Rvcg/src/vcglib/vcg/math/camera.h | 19 Rvcg-0.11/Rvcg/src/vcglib/vcg/math/gen_normal.h | 103 Rvcg-0.11/Rvcg/src/vcglib/vcg/math/matrix33.h | 2 Rvcg-0.11/Rvcg/src/vcglib/vcg/math/matrix44.h | 2 Rvcg-0.11/Rvcg/src/vcglib/vcg/math/quadric5.h | 1059 +- Rvcg-0.11/Rvcg/src/vcglib/vcg/math/shot.h | 130 Rvcg-0.11/Rvcg/src/vcglib/vcg/simplex/edge/component.h | 154 Rvcg-0.11/Rvcg/src/vcglib/vcg/simplex/edge/pos.h | 2 Rvcg-0.11/Rvcg/src/vcglib/vcg/simplex/face/base.h | 306 Rvcg-0.11/Rvcg/src/vcglib/vcg/simplex/face/component.h | 50 Rvcg-0.11/Rvcg/src/vcglib/vcg/simplex/face/component_ocf.h | 83 Rvcg-0.11/Rvcg/src/vcglib/vcg/simplex/face/component_polygon.h | 123 Rvcg-0.11/Rvcg/src/vcglib/vcg/simplex/face/pos.h | 677 - Rvcg-0.11/Rvcg/src/vcglib/vcg/simplex/face/topology.h | 4 Rvcg-0.11/Rvcg/src/vcglib/vcg/simplex/tetrahedron/pos.h | 2 Rvcg-0.11/Rvcg/src/vcglib/vcg/simplex/vertex/component.h | 151 Rvcg-0.11/Rvcg/src/vcglib/vcg/simplex/vertex/component_ocf.h | 350 Rvcg-0.11/Rvcg/src/vcglib/vcg/space/box2.h | 6 Rvcg-0.11/Rvcg/src/vcglib/vcg/space/color4.h | 147 Rvcg-0.11/Rvcg/src/vcglib/vcg/space/colorspace.h | 3664 +++++----- Rvcg-0.11/Rvcg/src/vcglib/vcg/space/deprecated_point3.h | 7 Rvcg-0.11/Rvcg/src/vcglib/vcg/space/index/base2d.h |only Rvcg-0.11/Rvcg/src/vcglib/vcg/space/index/closest2d.h |only Rvcg-0.11/Rvcg/src/vcglib/vcg/space/index/grid_closest2d.h |only Rvcg-0.11/Rvcg/src/vcglib/vcg/space/index/grid_static_ptr2d.h |only Rvcg-0.11/Rvcg/src/vcglib/vcg/space/index/grid_util.h | 20 Rvcg-0.11/Rvcg/src/vcglib/vcg/space/index/grid_util2d.h |only Rvcg-0.11/Rvcg/src/vcglib/vcg/space/index/kdtree/kdtree.h | 623 + Rvcg-0.11/Rvcg/src/vcglib/vcg/space/index/kdtree/kdtree.h.rej | 111 Rvcg-0.11/Rvcg/src/vcglib/vcg/space/index/kdtree/priorityqueue.h | 188 Rvcg-0.11/Rvcg/src/vcglib/vcg/space/index/kdtree/priorityqueue.h.rej |only Rvcg-0.11/Rvcg/src/vcglib/vcg/space/index/octree.h | 2 Rvcg-0.11/Rvcg/src/vcglib/vcg/space/index/perfect_spatial_hashing.h | 3062 ++++---- Rvcg-0.11/Rvcg/src/vcglib/vcg/space/index/space_iterators.h | 2 Rvcg-0.11/Rvcg/src/vcglib/vcg/space/index/space_iterators2d.h |only Rvcg-0.11/Rvcg/src/vcglib/vcg/space/index/spatial_hashing.h | 538 - Rvcg-0.11/Rvcg/src/vcglib/vcg/space/index/spatial_hashing2d.h |only Rvcg-0.11/Rvcg/src/vcglib/vcg/space/intersection2.h | 52 Rvcg-0.11/Rvcg/src/vcglib/vcg/space/intersection3.h | 2 Rvcg-0.11/Rvcg/src/vcglib/vcg/space/polygon3.h |only Rvcg-0.11/Rvcg/src/vcglib/vcg/space/ray2.h | 2 Rvcg-0.11/Rvcg/src/vcglib/vcg/space/rect_packer.h | 2 Rvcg-0.11/Rvcg/src/vcglib/vcg/space/segment2.h | 25 Rvcg-0.11/Rvcg/src/vcglib/vcg/space/tetra3.h | 2 Rvcg-0.11/Rvcg/src/vcglib/vcg/space/texcoord2.h | 75 Rvcg-0.11/Rvcg/src/vcglib/vcg/space/triangle2.h | 183 Rvcg-0.11/Rvcg/src/vcglib/vcg/space/triangle3.h | 171 Rvcg-0.11/Rvcg/src/vcglib/wrap/gl/gl_field.h | 92 Rvcg-0.11/Rvcg/src/vcglib/wrap/gl/glu_tessellator_cap.h | 7 Rvcg-0.11/Rvcg/src/vcglib/wrap/gl/math.h | 33 Rvcg-0.11/Rvcg/src/vcglib/wrap/gl/pick.h | 124 Rvcg-0.11/Rvcg/src/vcglib/wrap/gl/trimesh.h | 320 Rvcg-0.11/Rvcg/src/vcglib/wrap/glw/program.h | 1062 +- Rvcg-0.11/Rvcg/src/vcglib/wrap/gui/coordinateframe.cpp | 46 Rvcg-0.11/Rvcg/src/vcglib/wrap/gui/coordinateframe.h | 4 Rvcg-0.11/Rvcg/src/vcglib/wrap/gui/rubberband.cpp | 4 Rvcg-0.11/Rvcg/src/vcglib/wrap/gui/trackmode.cpp | 354 Rvcg-0.11/Rvcg/src/vcglib/wrap/gui/trackmode.h | 2 Rvcg-0.11/Rvcg/src/vcglib/wrap/gui/trackutils.h | 200 Rvcg-0.11/Rvcg/src/vcglib/wrap/gui/view.h | 49 Rvcg-0.11/Rvcg/src/vcglib/wrap/igl |only Rvcg-0.11/Rvcg/src/vcglib/wrap/io_trimesh/export_dxf.h | 5 Rvcg-0.11/Rvcg/src/vcglib/wrap/io_trimesh/export_field.h | 83 Rvcg-0.11/Rvcg/src/vcglib/wrap/io_trimesh/export_idtf.h | 4 Rvcg-0.11/Rvcg/src/vcglib/wrap/io_trimesh/export_obj.h | 19 Rvcg-0.11/Rvcg/src/vcglib/wrap/io_trimesh/export_off.h | 272 Rvcg-0.11/Rvcg/src/vcglib/wrap/io_trimesh/export_ply.h | 1214 +-- Rvcg-0.11/Rvcg/src/vcglib/wrap/io_trimesh/export_stl.h | 156 Rvcg-0.11/Rvcg/src/vcglib/wrap/io_trimesh/export_u3d.h | 423 - Rvcg-0.11/Rvcg/src/vcglib/wrap/io_trimesh/import_asc.h | 4 Rvcg-0.11/Rvcg/src/vcglib/wrap/io_trimesh/import_ctm.h | 3 Rvcg-0.11/Rvcg/src/vcglib/wrap/io_trimesh/import_field.h | 1 Rvcg-0.11/Rvcg/src/vcglib/wrap/io_trimesh/import_gts.h | 2 Rvcg-0.11/Rvcg/src/vcglib/wrap/io_trimesh/import_nvm.h | 89 Rvcg-0.11/Rvcg/src/vcglib/wrap/io_trimesh/import_obj.h | 58 Rvcg-0.11/Rvcg/src/vcglib/wrap/io_trimesh/import_off.h | 19 Rvcg-0.11/Rvcg/src/vcglib/wrap/io_trimesh/import_out.h | 102 Rvcg-0.11/Rvcg/src/vcglib/wrap/io_trimesh/import_ply.h | 1842 ++--- Rvcg-0.11/Rvcg/src/vcglib/wrap/io_trimesh/import_ptx.h | 782 +- Rvcg-0.11/Rvcg/src/vcglib/wrap/io_trimesh/precision.h |only Rvcg-0.11/Rvcg/src/vcglib/wrap/qt/gl_label.h | 14 Rvcg-0.11/Rvcg/src/vcglib/wrap/system/qgetopt.cpp | 15 Rvcg-0.11/Rvcg/src/vcglib/wrap/system/qgetopt.h | 7 174 files changed, 17950 insertions(+), 16168 deletions(-)
Title: Analysis of Dose-Response Curves
Description: Analysis of dose-response data is made available through a suite of flexible and versatile model fitting and after-fitting functions.
Author: Christian Ritz
Maintainer: Christian Ritz
Diff between drc versions 2.5-11 dated 2015-04-13 and 2.5-12 dated 2015-04-14
DESCRIPTION | 8 - MD5 | 8 - R/plot.drc.R | 271 ++++++++++++++++++++++++++++++-------------------------- man/ED.drc.Rd | 3 man/plot.drc.Rd | 34 +++---- 5 files changed, 175 insertions(+), 149 deletions(-)
Title: Analysis of Ecological Data : Exploratory and Euclidean Methods
in Environmental Sciences
Description: Multivariate data analysis and graphical display.
Author: Stéphane Dray
Maintainer: Aurélie Siberchicot
Diff between ade4 versions 1.6-2 dated 2013-11-20 and 1.7-2 dated 2015-04-14
ChangeLog | 353 ++++++++++++++++++++ DESCRIPTION | 21 - MD5 | 781 +++++++++++++++++++++++---------------------- NAMESPACE | 56 ++- R/add.scatter.R | 2 R/between.R | 26 + R/betwitdpcoa.R |only R/coinertia.R | 4 R/combine.4thcorner.R | 1 R/costatis.R | 33 + R/dist.dudi.R | 4 R/dpcoa.R | 284 +++++++--------- R/dudi.R | 27 + R/foucart.R | 4 R/fourthcorner.R | 4 R/fourthcorner.rlq.R | 16 R/kplot.foucart.R | 4 R/kplot.mcoa.R | 8 R/kplot.mfa.R | 4 R/kplot.pta.R | 16 R/kplot.sepan.R | 10 R/kplot.statis.R | 4 R/krandboot.R |only R/krandxval.R |only R/ktab.R | 93 +++-- R/ktab.data.frame.R | 5 R/ktab.list.df.R | 4 R/ktab.list.dudi.R | 7 R/ktab.match2ktabs.R | 4 R/ktab.within.R | 6 R/mbpcaiv.R |only R/mbpls.R |only R/mcoa.R | 29 - R/mdpcoa.R | 10 R/mfa.R | 4 R/multiblock.R |only R/multispati.R | 4 R/orthobasis.R | 104 ++--- R/plot.4thcorner.R | 36 +- R/print.4thcorner.R | 2 R/procuste.R | 142 ++++---- R/pta.R | 27 - R/randboot.R |only R/randtest.between.R | 21 - R/randtest.rlq.R | 2 R/randxval.R |only R/rlq.R | 47 +- R/s.image.R | 36 +- R/s.kde2d.R | 1 R/s.logo.R | 1 R/scatterutil.R | 2 R/sepan.R | 1 R/statico.R | 43 ++ R/statis.R | 4 R/testdim.R | 16 R/utilities.R | 5 R/within.R | 18 + data/abouheif.eg.rda |binary data/acacia.rda |binary data/aminoacyl.rda |binary data/apis108.rda |binary data/aravo.rda |binary data/ardeche.rda |binary data/arrival.rda |binary data/atlas.rda |binary data/atya.rda |binary data/avijons.rda |binary data/avimedi.rda |binary data/aviurba.rda |binary data/bacteria.rda |binary data/banque.rda |binary data/baran95.rda |binary data/bf88.rda |binary data/bordeaux.rda |binary data/bsetal97.rda |binary data/buech.rda |binary data/butterfly.rda |binary data/capitales.rda |binary data/carni19.rda |binary data/carni70.rda |binary data/carniherbi49.rda |binary data/casitas.rda |binary data/chatcat.rda |binary data/chats.rda |binary data/chazeb.rda |binary data/chevaine.rda |binary data/chickenk.rda |only data/clementines.rda |binary data/cnc2003.rda |binary data/coleo.rda |binary data/corvus.rda |binary data/datalist | 2 data/deug.rda |binary data/doubs.rda |binary data/dunedata.rda |binary data/ecg.rda |binary data/ecomor.rda |binary data/elec88.rda |binary data/escopage.rda |binary data/euro123.rda |binary data/fission.rda |binary data/friday87.rda |binary data/fruits.rda |binary data/ggtortoises.rda |binary data/granulo.rda |binary data/hdpg.rda |binary data/housetasks.rda |binary data/humDNAm.rda |binary data/ichtyo.rda |binary data/irishdata.rda |binary data/julliot.rda |binary data/jv73.rda |binary data/kcponds.rda |binary data/lascaux.rda |binary data/lizards.rda |binary data/macaca.rda |binary data/macon.rda |binary data/macroloire.rda |binary data/mafragh.rda |binary data/maples.rda |binary data/mariages.rda |binary data/meau.rda |binary data/meaudret.rda |binary data/microsatt.rda |binary data/mjrochet.rda |binary data/mollusc.rda |binary data/monde84.rda |binary data/morphosport.rda |binary data/newick.eg.rda |binary data/njplot.rda |binary data/olympic.rda |binary data/oribatid.rda |binary data/ours.rda |binary data/palm.rda |binary data/pap.rda |binary data/pcw.rda |only data/perthi02.rda |binary data/piosphere.rda |binary data/presid2002.rda |binary data/procella.rda |binary data/rankrock.rda |binary data/rhizobium.rda |binary data/rhone.rda |binary data/rpjdl.rda |binary data/santacatalina.rda |binary data/sarcelles.rda |binary data/seconde.rda |binary data/skulls.rda |binary data/steppe.rda |binary data/syndicats.rda |binary data/t3012.rda |binary data/tarentaise.rda |binary data/taxo.eg.rda |binary data/tintoodiel.rda |binary data/tithonia.rda |binary data/tortues.rda |binary data/toxicity.rda |binary data/trichometeo.rda |binary data/ungulates.rda |binary data/vegtf.rda |binary data/veuvage.rda |binary data/westafrica.rda |binary data/woangers.rda |binary data/worksurv.rda |binary data/yanomama.rda |binary data/zealand.rda |binary man/EH.Rd | 2 man/PI2newick.Rd | 2 man/abouheif.eg.Rd | 2 man/acacia.Rd | 19 - man/add.scatter.Rd | 103 +++-- man/ade4.package.Rd | 2 man/adegraphicsLoaded.Rd |only man/aminoacyl.Rd | 2 man/amova.Rd | 2 man/aravo.Rd | 25 - man/ardeche.Rd | 6 man/area.plot.Rd | 172 +++++---- man/as.taxo.Rd | 2 man/atlas.Rd | 89 +++-- man/atya.Rd | 26 - man/avijons.Rd | 104 +++-- man/avimedi.Rd | 40 +- man/bacteria.Rd | 11 man/banque.Rd | 8 man/baran95.Rd | 64 ++- man/between.Rd | 30 + man/betweencoinertia.Rd | 4 man/bf88.Rd | 31 + man/bsetal97.Rd | 2 man/buech.Rd | 25 - man/butterfly.Rd | 29 + man/bwca.dpcoa.Rd |only man/cailliez.Rd | 2 man/capitales.Rd | 57 ++- man/carni70.Rd | 9 man/cca.Rd | 99 +++-- man/chats.Rd | 40 +- man/chazeb.Rd | 3 man/chevaine.Rd | 67 +-- man/chickenk.Rd |only man/clementines.Rd | 41 +- man/cnc2003.Rd | 1 man/coinertia.Rd | 21 - man/coleo.Rd | 27 + man/corkdist.Rd | 26 - man/corvus.Rd | 14 man/costatis.Rd | 9 man/costatis.randtest.Rd |only man/deug.Rd | 15 man/disc.Rd | 2 man/discrimin.Rd | 5 man/discrimin.coa.Rd | 2 man/dist.binary.Rd | 2 man/dist.dudi.Rd | 2 man/dist.genet.Rd | 2 man/dist.neig.Rd | 2 man/dist.prop.Rd | 24 - man/dist.quant.Rd | 24 - man/divc.Rd | 2 man/divcmax.Rd | 24 - man/dotchart.phylog.Rd | 2 man/doubs.Rd | 50 +- man/dpcoa.Rd | 58 ++- man/dudi.Rd | 5 man/dudi.acm.Rd | 26 + man/dudi.coa.Rd | 16 man/dudi.dec.Rd | 2 man/dudi.fca.Rd | 11 man/dudi.hillsmith.Rd | 18 - man/dudi.mix.Rd | 16 man/dudi.nsc.Rd | 12 man/dudi.pca.Rd | 51 +- man/dudi.pco.Rd | 2 man/ecg.Rd | 2 man/ecomor.Rd | 36 +- man/elec88.Rd | 44 +- man/euro123.Rd | 29 + man/foucart.Rd | 12 man/friday87.Rd | 7 man/fruits.Rd | 31 + man/gearymoran.Rd | 19 - man/ggtortoises.Rd | 35 +- man/granulo.Rd | 16 man/gridrowcol.Rd | 37 +- man/hdpg.Rd | 24 - man/housetasks.Rd | 11 man/humDNAm.Rd | 4 man/inertia.dudi.Rd | 2 man/irishdata.Rd | 45 ++ man/is.euclid.Rd | 2 man/julliot.Rd | 94 +++-- man/jv73.Rd | 33 + man/kcponds.Rd | 50 +- man/kdist.Rd | 2 man/kdist2ktab.Rd | 15 man/kdisteuclid.Rd | 39 +- man/kplot.foucart.Rd | 8 man/kplot.mcoa.Rd | 12 man/kplot.mfa.Rd | 3 man/kplot.pta.Rd | 11 man/kplot.sepan.Rd | 38 +- man/kplot.statis.Rd | 14 man/krandtest.Rd | 2 man/ktab.Rd | 18 - man/ktab.data.frame.Rd | 2 man/ktab.list.df.Rd | 4 man/ktab.list.dudi.Rd | 18 - man/ktab.within.Rd | 2 man/lascaux.Rd | 38 +- man/lingoes.Rd | 2 man/lizards.Rd | 2 man/macaca.Rd | 22 - man/macroloire.Rd | 4 man/mafragh.Rd | 86 +++- man/mantel.randtest.Rd | 2 man/mantel.rtest.Rd | 2 man/maples.Rd | 5 man/mariages.Rd | 22 - man/mbpcaiv.Rd |only man/mbpls.Rd |only man/mcoa.Rd | 2 man/mdpcoa.Rd | 316 +++++++++--------- man/meau.Rd | 25 + man/meaudret.Rd | 25 + man/mfa.Rd | 2 man/microsatt.Rd | 12 man/mjrochet.Rd | 22 - man/mld.Rd | 2 man/mollusc.Rd | 26 + man/mstree.Rd | 42 +- man/multiblock.Rd |only man/multispati.Rd | 71 ++-- man/multispati.randtest.Rd | 4 man/multispati.rtest.Rd | 4 man/neig.Rd | 91 ++--- man/newick.eg.Rd | 4 man/newick2phylog.Rd | 10 man/niche.Rd | 41 +- man/nipals.Rd | 34 + man/njplot.Rd | 2 man/olympic.Rd | 31 + man/optimEH.Rd | 2 man/oribatid.Rd | 17 man/originality.Rd | 2 man/orisaved.Rd | 2 man/orthobasis.Rd | 119 ++++-- man/orthogram.Rd | 4 man/ours.Rd | 6 man/palm.Rd | 3 man/pap.Rd | 3 man/pcaiv.Rd | 2 man/pcaivortho.Rd | 43 +- man/pcw.Rd |only man/phylog.Rd | 16 man/plot.between.Rd | 37 +- man/plot.phylog.Rd | 2 man/plot.within.Rd | 34 + man/presid2002.Rd | 64 ++- man/procella.Rd | 2 man/procuste.Rd | 78 ++-- man/procuste.randtest.Rd | 2 man/procuste.rtest.Rd | 2 man/pta.Rd | 7 man/quasieuclid.Rd | 2 man/randEH.Rd | 2 man/randboot.Rd |only man/randboot.multiblock.Rd |only man/randtest.amova.Rd | 2 man/randtest.between.Rd | 2 man/randtest.coinertia.Rd | 2 man/randtest.discrimin.Rd | 2 man/randtest.pcaiv.Rd | 2 man/randxval.Rd |only man/rankrock.Rd | 7 man/reconst.Rd | 2 man/rhizobium.Rd | 156 ++++---- man/rlq.Rd | 2 man/rpjdl.Rd | 14 man/rtest.Rd | 7 man/s.chull.Rd | 11 man/s.class.Rd | 58 +-- man/s.corcircle.Rd | 20 - man/s.distri.Rd | 47 +- man/s.image.Rd | 62 +-- man/s.kde2d.Rd | 17 man/s.label.Rd | 43 +- man/s.logo.Rd | 42 +- man/s.match.Rd | 24 - man/s.match.class.Rd | 37 +- man/s.traject.Rd | 19 - man/s.value.Rd | 42 +- man/santacatalina.Rd | 22 - man/sarcelles.Rd | 22 - man/scatter.acm.Rd | 8 man/scatter.coa.Rd | 29 + man/scatter.dudi.Rd | 8 man/scatter.fca.Rd | 9 man/scatterutil.Rd | 3 man/sco.class.Rd | 2 man/sco.distri.Rd | 66 +-- man/sco.gauss.Rd | 2 man/sco.label.Rd | 2 man/sco.match.Rd | 2 man/score.Rd | 6 man/score.acm.Rd | 4 man/score.coa.Rd | 6 man/score.pca.Rd | 2 man/seconde.Rd | 6 man/skulls.Rd | 3 man/statico.Rd | 4 man/statico.krandtest.Rd |only man/statis.Rd | 11 man/supcol.Rd | 20 - man/suprow.Rd | 47 +- man/symbols.phylog.Rd | 2 man/t3012.Rd | 16 man/table.paint.Rd | 1 man/table.phylog.Rd | 2 man/table.value.Rd | 21 - man/tarentaise.Rd | 2 man/testdim.Rd | 14 man/testdim.multiblock.Rd |only man/tintoodiel.Rd | 40 +- man/tortues.Rd | 18 - man/toxicity.Rd | 15 man/triangle.class.Rd | 30 - man/triangle.plot.Rd | 28 - man/trichometeo.Rd | 18 - man/variance.phylog.Rd | 2 man/vegtf.Rd | 36 +- man/wca.rlq.Rd | 5 man/westafrica.Rd | 112 +++--- man/within.Rd | 27 + man/withincoinertia.Rd | 6 man/withinpca.Rd | 8 man/witwit.coa.Rd | 16 man/worksurv.Rd | 16 man/zealand.Rd | 42 +- src/adesub.c | 14 src/adesub.h | 1 src/fourthcorner.c | 2 src/tests.c | 4 403 files changed, 4569 insertions(+), 2887 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2014-12-21 0.5
2013-11-20 0.4
2012-08-01 0.2
2011-02-03 0.1
Title: Distance Measures for Time Series Data
Description: A set of commonly used distance measures and some additional functions which, although initially not designed for this purpose, can be used to measure the dissimilarity between time series. These measures can be used to perform clustering, classification or other data mining tasks which require the definition of a distance measure between time series.
Author: Usue Mori, Alexander Mendiburu, J.A. Lozano
Maintainer: Usue Mori
Diff between TSdist versions 2.1 dated 2015-03-31 and 2.2 dated 2015-04-14
DESCRIPTION | 8 ++++---- MD5 | 6 +++--- man/TSdist-package.Rd | 5 ++--- man/lb.keoghDistance.Rd | 2 +- 4 files changed, 10 insertions(+), 11 deletions(-)
Title: Parallel Programming Tools for Rcpp
Description: High level functions for doing parallel programming with Rcpp.
For example, the parallelFor() function can be used to convert the work of
a standard serial "for" loop into a parallel one and the parallelReduce()
function can be used for accumulating aggregate or other values.
Author: JJ Allaire [aut, cre],
Romain Francois [aut, cph],
Gregory Vandenbrouck [aut],
Marcus Geelnard [aut, cph] (TinyThread library,
http://tinythreadpp.bitsnbites.eu/),
RStudio [cph],
Intel [aut, cph] (Intel TBB library,
https://www.threadingbuildingblocks.org/),
Microsoft [cph]
Maintainer: JJ Allaire
Diff between RcppParallel versions 4.3.6 dated 2015-03-10 and 4.3.8 dated 2015-04-14
RcppParallel-4.3.6/RcppParallel/README.md |only RcppParallel-4.3.8/RcppParallel/DESCRIPTION | 12 +-- RcppParallel-4.3.8/RcppParallel/MD5 | 34 +++++--- RcppParallel-4.3.8/RcppParallel/NEWS | 11 +- RcppParallel-4.3.8/RcppParallel/R/build.R | 24 +++--- RcppParallel-4.3.8/RcppParallel/R/hooks.R | 15 +++ RcppParallel-4.3.8/RcppParallel/inst/include/RcppParallel.h | 2 RcppParallel-4.3.8/RcppParallel/inst/include/RcppParallel/TBB.h | 1 RcppParallel-4.3.8/RcppParallel/inst/include/tthread/tinythread.h | 1 RcppParallel-4.3.8/RcppParallel/man/RcppParallel-package.Rd | 4 - RcppParallel-4.3.8/RcppParallel/src/Makevars | 39 ++++++---- RcppParallel-4.3.8/RcppParallel/src/tbb/build/SunOS.suncc.inc | 2 RcppParallel-4.3.8/RcppParallel/src/tbb/build/linux.clang.inc | 2 RcppParallel-4.3.8/RcppParallel/tests/testthat/cpp/malloc.cpp |only RcppParallel-4.3.8/RcppParallel/tests/testthat/pkg |only RcppParallel-4.3.8/RcppParallel/tests/testthat/test-malloc.R |only RcppParallel-4.3.8/RcppParallel/tests/testthat/test-pkg.R |only 17 files changed, 93 insertions(+), 54 deletions(-)
Title: Testing Homoscedasticity, Multivariate Normality, and Missing
Completely at Random
Description: To test whether the missing data mechanism, in a set of incompletely observed data, is one of missing completely at random (MCAR).
For detailed description see Jamshidian, M. Jalal, S., and Jansen, C. (2014). "MissMech: An R Package for Testing Homoscedasticity, Multivariate Normality, and Missing Completely at Random (MCAR)," Journal of Statistical Software, 56(6), 1-31. URL http://www.jstatsoft.org/v56/i06/.
Author: Mortaza Jamshidian, Siavash Jalal, and Camden Jansen
Maintainer: Mortaza Jamshidian
Diff between MissMech versions 1.0.1 dated 2014-01-20 and 1.0.2 dated 2015-04-14
MissMech-1.0.1/MissMech/R/AndersonDarling.r |only MissMech-1.0.2/MissMech/DESCRIPTION | 13 +++++++------ MissMech-1.0.2/MissMech/MD5 | 10 +++++----- MissMech-1.0.2/MissMech/NAMESPACE | 7 +++++++ MissMech-1.0.2/MissMech/R/AndersonDarling.R |only MissMech-1.0.2/MissMech/man/MissMech-package.Rd | 4 ++-- MissMech-1.0.2/MissMech/man/TestMCARNormality.Rd | 8 ++++---- 7 files changed, 25 insertions(+), 17 deletions(-)
Title: Lucid Printing of Floating Point Numbers
Description: Print vectors (and data frames) of floating point numbers using a non-scientific format optimized for human readers. Vectors of numbers are rounded using significant digits, aligned at the decimal point, and all zeros trailing the decimal point are dropped.
Author: Kevin Wright
Maintainer: Kevin Wright
Diff between lucid versions 1.1 dated 2015-02-10 and 1.2 dated 2015-04-14
DESCRIPTION | 10 +-- MD5 | 26 +++++----- NAMESPACE | 2 NEWS | 4 + R/lucid.r | 13 +++-- R/vc.r | 35 ++++++++++++- inst/doc/lucid_printing.R | 31 ++++++++++++ inst/doc/lucid_printing.Rnw | 78 +++++++++++++++++++------------ inst/doc/lucid_printing.pdf |binary man/vc.Rd | 16 ++++-- vignettes/figure/unnamed-chunk-5-1.pdf |binary vignettes/lucid.bib | 7 ++ vignettes/lucid_printing-concordance.tex | 4 - vignettes/lucid_printing.Rnw | 78 +++++++++++++++++++------------ 14 files changed, 215 insertions(+), 89 deletions(-)
Title: Gamma Lasso Regression
Description: The gamma lasso algorithm provides regularization paths corresponding to a range of non-convex cost functions between L0 and L1 norms. As much as possible, usage for this package is analogous to that for the glmnet package (which does the same thing for penalization between L1 and L2 norms). For details see: Taddy (2015), One-Step Estimator Paths for Concave Regularization, http://arxiv.org/abs/1308.5623.
Author: Matt Taddy
Maintainer: Matt Taddy
Diff between gamlr versions 1.13 dated 2015-04-01 and 1.13-1 dated 2015-04-14
DESCRIPTION | 6 +++--- MD5 | 4 ++-- src/gamlr.c | 4 ---- 3 files changed, 5 insertions(+), 9 deletions(-)
Title: Exploration and Graphics for RivEr Trends (EGRET)
Description: Statistics and graphics for streamflow history,
water quality trends, and the statistical modeling algorithm: Weighted
Regressions on Time, Discharge, and Season (WRTDS).
Author: Robert Hirsch [aut],
Laura DeCicco [aut, cre]
Maintainer: Laura DeCicco
Diff between EGRET versions 2.1.1 dated 2015-02-17 and 2.2.0 dated 2015-04-14
EGRET-2.1.1/EGRET/vignettes/EGRET-concordance.tex |only EGRET-2.1.1/EGRET/vignettes/figure |only EGRET-2.1.1/EGRET/vignettes/framed.sty |only EGRET-2.2.0/EGRET/DESCRIPTION | 8 EGRET-2.2.0/EGRET/MD5 | 120 +-------- EGRET-2.2.0/EGRET/NEWS | 11 EGRET-2.2.0/EGRET/R/EGRET.R | 2 EGRET-2.2.0/EGRET/R/fluxUnit.R | 3 EGRET-2.2.0/EGRET/R/modelEstimation.R | 11 EGRET-2.2.0/EGRET/R/objectDefinitions.R | 281 +++++++++++----------- EGRET-2.2.0/EGRET/R/plotFlowSingle.R | 9 EGRET-2.2.0/EGRET/R/sysdata.rda |binary EGRET-2.2.0/EGRET/README.md | 2 EGRET-2.2.0/EGRET/build/vignette.rds |binary EGRET-2.2.0/EGRET/inst/CITATION |only EGRET-2.2.0/EGRET/inst/doc/EGRET.Rnw | 4 EGRET-2.2.0/EGRET/inst/doc/EGRET.pdf |binary EGRET-2.2.0/EGRET/man/EGRET-package.Rd | 2 EGRET-2.2.0/EGRET/man/fluxUnit-class.Rd | 2 EGRET-2.2.0/EGRET/man/modelEstimation.Rd | 6 EGRET-2.2.0/EGRET/man/plotFlowSingle.Rd | 9 EGRET-2.2.0/EGRET/vignettes/EGRET.Rnw | 4 22 files changed, 222 insertions(+), 252 deletions(-)
Title: Automatic Creation of Dummies with Support for Predictive
Modeling
Description: Efficiently create dummies of all factors and character vectors in a data frame. Support is included for learning the categories on one data set (e.g., a training set) and deploying them on another (e.g., a test set).
Author: Michel Ballings and Dirk Van den Poel
Maintainer: Michel Ballings
Diff between dummy versions 0.1.0 dated 2014-11-07 and 0.1.2 dated 2015-04-14
DESCRIPTION | 6 +++--- MD5 | 10 +++++++--- R/categories.R | 4 +++- R/dummy.R | 1 + R/dummyNews.R |only R/zzz.R |only inst |only man/dummyNews.Rd |only 8 files changed, 14 insertions(+), 7 deletions(-)
Title: R Console Bindings for the 'Domino Command-Line Client'
Description: A wrapper on top of the 'Domino Command-Line Client'. It lets you run 'Domino' commands (e.g., "run", "upload", "download") directly from your R environment. Under the hood, it uses R's system function to run the 'Domino' executable, which must be installed as a prerequisite.
Author: Jacek Glodek
Maintainer: Nick Elprin
Diff between domino versions 0.2-1 dated 2014-09-09 and 0.2-5 dated 2015-04-14
DESCRIPTION | 12 +++---- MD5 | 9 +++-- R/domino.R | 78 +++++++++++++++++++++++++++++++++++++++++++++----- man/domino-package.Rd | 8 ++--- man/domino.login.Rd | 13 ++++++-- man/domino.sync.Rd |only 6 files changed, 96 insertions(+), 24 deletions(-)
Title: Descriptive Statistics
Description: Weighted frequency and contingency tables of categorical
variables and of the comparison of the mean value of a numerical
variable by the levels of a factor, and methods to produce xtable
objects of the tables and to plot them. There are also functions to
facilitate the character encoding conversion of objects, to quickly
convert fixed width files into csv ones, and to export a data.frame to
a text file with the necessary R and SPSS codes to reread the data.
Author: Jakson Aquino. Includes R source code and/or documentation
written by Dirk Enzmann, Marc Schwartz, Nitin Jain, and Stefan
Kraft
Maintainer: Jakson Aquino
Diff between descr versions 1.0.4 dated 2014-11-04 and 1.1 dated 2015-04-14
DESCRIPTION | 20 ++-- MD5 | 24 ++--- NEWS | 14 +++ R/CrossTable.R | 49 +++++------ R/crosstab.R | 75 +++++++++-------- inst/po/pt_BR/LC_MESSAGES/R-descr.mo |binary inst/po/pt_BR/LC_MESSAGES/descr.mo |binary man/crosstab.Rd | 21 ++-- man/plot.CrossTable.Rd | 2 po/R-descr.pot | 142 ++++++++++++++++----------------- po/R-pt_BR.po | 150 +++++++++++++++++------------------ po/descr.pot | 16 +-- po/pt_BR.po | 22 ++--- 13 files changed, 281 insertions(+), 254 deletions(-)