Title: Interface Utilities, Model Templates, Parallel Computing Methods
and Additional Distributions for MCMC Models in JAGS
Diff between runjags versions 2.0.1-2 dated 2015-04-12 and 2.0.1-4 dated 2015-04-14
Description: User-friendly interface utilities for MCMC models via
Just Another Gibbs Sampler (JAGS), facilitating the use of parallel
(or distributed) processors for multiple chains, automated control
of convergence and sample length diagnostics, and evaluation of the
performance of a model using drop-k validation or against simulated
data. Template model specifications can be generated using a standard
lme4-style formula interface to assist users less familiar with the
BUGS syntax. A JAGS extension module provides additional distributions
including the Pareto family of distributions, the DuMouchel prior and
the half-Cauchy prior.
Author: Matthew Denwood [aut, cre],
Martyn Plummer [cph] (Copyright holder of the code in
/src/distributions/jags, src/distributions/DPar1.*, configure.ac,
and original copyright holder of some modified code where
indicated)
Maintainer: Matthew Denwood
DESCRIPTION | 12 +--
MD5 | 14 +--
build/vignette.rds |binary
inst/doc/UserGuide.pdf |binary
inst/doc/quickjags.R | 9 --
inst/doc/quickjags.Rmd | 30 ++------
inst/doc/quickjags.html | 171 +++++++++++++++++++-----------------------------
vignettes/quickjags.Rmd | 30 ++------
8 files changed, 99 insertions(+), 167 deletions(-)
Title: BInary Longitudinal Data
Diff between bild versions 1.1-3 dated 2013-02-18 and 1.1-5 dated 2015-04-14
Description: Performs logistic regression for binary longitudinal
data, allowing for serial dependence among observations from a given
individual and a random intercept term. Estimation is via maximization
of the exact likelihood of a suitably defined model. Missing values and
unbalanced data are allowed, with some restrictions.
Author: M. Helena Gonçalves, M. Salomé Cabral and Adelchi Azzalini,
apart from a set of Fortran-77 subroutines written by R. Piessens
and E. de Doncker, belonging to the suite "Quadpack".
Maintainer: M. Helena Gonçalves
bild-1.1-3/bild/INDEX |only
bild-1.1-3/bild/history.txt |only
bild-1.1-5/bild/DESCRIPTION | 27 ++---
bild-1.1-5/bild/MD5 | 29 ++---
bild-1.1-5/bild/NEWS |only
bild-1.1-5/bild/inst/CITATION | 156 +++++++++++++++++++-----------
bild-1.1-5/bild/man/airpollution.rd | 9 -
bild-1.1-5/bild/man/anova-methods.Rd | 30 +++--
bild-1.1-5/bild/man/bild-class.Rd | 2
bild-1.1-5/bild/man/bild-package.Rd | 4
bild-1.1-5/bild/man/bild.Rd | 30 +++--
bild-1.1-5/bild/man/bildIntegrate.Rd | 12 +-
bild-1.1-5/bild/man/locust.rd | 7 -
bild-1.1-5/bild/man/muscatine.rd | 4
bild-1.1-5/bild/man/plot-methods.Rd | 23 ++--
bild-1.1-5/bild/man/summary-methods.Rd | 4
bild-1.1-5/bild/man/summary.bild-class.Rd | 4
17 files changed, 198 insertions(+), 143 deletions(-)
Title: Tools for the Analysis of Air Pollution Data
Diff between openair versions 1.1-5 dated 2015-02-09 and 1.5 dated 2015-04-14
Description: Tools to analyse, interpret and understand air
pollution data. Data are typically hourly time series
and both monitoring data and dispersion model output
can be analysed. Many functions can also be applied to
other data, including meteorological and traffic data.
Author: David Carslaw [aut, cre],
Karl Ropkins [aut]
Maintainer: David Carslaw
DESCRIPTION | 16
MD5 | 185 +-
NAMESPACE | 170 +-
NEWS |only
R/GoogleMapsPlot.R | 1894 ++++++++++++++---------------
R/TaylorDiagram.R | 1278 ++++++++++---------
R/TheilSen.R | 1172 +++++++++---------
R/airbaseFindCode.R | 270 ++--
R/airbaseInfo.R | 88 -
R/airbaseSplice.R | 180 +-
R/airbaseStats.R | 674 +++++-----
R/aqStats.R | 48
R/calcFno2.R | 586 ++++-----
R/calendarPlot.R | 1020 +++++++--------
R/corPlot.R | 800 ++++++------
R/cutData.R | 16
R/getMeta.R | 14
R/import.R | 392 +++---
R/importADMS.R | 1974 +++++++++++++++---------------
R/importAirbase.R | 270 ++--
R/importKCL.R | 1191 +++++++++---------
R/linearRelation.R | 816 ++++++------
R/openair-package.R | 180 +-
R/percentileRose.R | 1112 ++++++++---------
R/polarAnnulus.R | 1470 +++++++++++-----------
R/polarCluster.R | 708 +++++-----
R/polarFreq.R | 922 +++++++-------
R/polarPlot.R | 1746 +++++++++++++-------------
R/scatterPlot.R | 2930 ++++++++++++++++++++++-----------------------
R/smoothTrend.R | 954 +++++++-------
R/timeAverage.R | 1012 +++++++--------
R/timePlot.R | 1242 +++++++++----------
R/timeVariation.R | 2067 ++++++++++++++++---------------
R/trajLevel.R | 889 ++++++-------
R/trajPlot.R | 624 ++++-----
R/trendLevel.R | 1202 +++++++++---------
R/utilities.R | 2030 +++++++++++++++----------------
R/windRose.R | 1482 +++++++++++-----------
README.md | 326 ++---
data/mydata.RData |binary
inst/CITATION | 27
man/GoogleMapsPlot.Rd | 438 +++---
man/TaylorDiagram.Rd | 550 ++++----
man/TheilSen.Rd | 546 ++++----
man/airbaseFindCode.Rd | 172 +-
man/airbaseInfo.Rd | 84 -
man/airbaseSplice.Rd | 122 -
man/airbaseStats.Rd | 536 ++++----
man/aqStats.Rd | 194 +-
man/calcFno2.Rd | 224 +--
man/calcPercentile.Rd | 130 -
man/calendarPlot.Rd | 404 +++---
man/conditionalEval.Rd | 398 +++---
man/conditionalQuantile.Rd | 330 ++---
man/corPlot.Rd | 306 ++--
man/cutData.Rd | 318 ++--
man/drawOpenKey.Rd | 366 ++---
man/import.Rd | 280 ++--
man/importADMS.Rd | 318 ++--
man/importAURN.Rd | 670 +++++-----
man/importAURNCsv.Rd | 356 ++---
man/importAirbase.Rd | 166 +-
man/importKCL.Rd | 972 +++++++-------
man/importMeta.Rd | 138 +-
man/importSAQN.Rd | 356 ++---
man/importTraj.Rd | 300 ++--
man/kernelExceed.Rd | 304 ++--
man/linearRelation.Rd | 292 ++--
man/modStats.Rd | 298 ++--
man/mydata.Rd | 100 -
man/openColours.Rd | 176 +-
man/openair.Rd | 190 +-
man/percentileRose.Rd | 386 ++---
man/polarAnnulus.Rd | 524 ++++----
man/polarCluster.Rd | 360 ++---
man/polarFreq.Rd | 432 +++---
man/polarPlot.Rd | 810 ++++++------
man/quickText.Rd | 90 -
man/rollingMean.Rd | 130 -
man/scatterPlot.Rd | 708 +++++-----
man/selectByDate.Rd | 166 +-
man/selectRunning.Rd | 114 -
man/smoothTrend.Rd | 448 +++---
man/splitByDate.Rd | 84 -
man/summaryPlot.Rd | 324 ++--
man/timeAverage.Rd | 392 +++---
man/timePlot.Rd | 582 ++++----
man/timeProp.Rd | 312 ++--
man/timeVariation.Rd | 615 ++++-----
man/trajCluster.Rd | 270 ++--
man/trajLevel.Rd | 522 ++++----
man/trajPlot.Rd | 318 ++--
man/trendLevel.Rd | 402 +++---
man/windRose.Rd | 585 ++++----
94 files changed, 26342 insertions(+), 26243 deletions(-)
Title: Invariant Causal Prediction
Diff between InvariantCausalPrediction versions 0.3 dated 2015-04-13 and 0.3-1 dated 2015-04-14
More information about InvariantCausalPrediction at CRAN
Description: Confidence intervals for causal effects, using data collected in different experimental or environmental conditions. Hidden variables can be included in the model with a more experimental version.
Author: Nicolai Meinshausen
Maintainer: Nicolai Meinshausen
InvariantCausalPrediction-0.3-1/InvariantCausalPrediction/DESCRIPTION | 8 ++++----
InvariantCausalPrediction-0.3-1/InvariantCausalPrediction/MD5 | 8 ++++----
InvariantCausalPrediction-0.3-1/InvariantCausalPrediction/NAMESPACE | 2 +-
InvariantCausalPrediction-0.3-1/InvariantCausalPrediction/R/hiddenICE.R |only
InvariantCausalPrediction-0.3-1/InvariantCausalPrediction/man/hiddenICE.Rd |only
InvariantCausalPrediction-0.3/InvariantCausalPrediction/R/feedbackNetwork.R |only
InvariantCausalPrediction-0.3/InvariantCausalPrediction/man/feedbackNetwork.Rd |only
7 files changed, 9 insertions(+), 9 deletions(-)
Permanent link
Title: Flexible Parametric Survival and Multi-State Models
Diff between flexsurv versions 0.5 dated 2014-09-22 and 0.6 dated 2015-04-14
Description: Flexible parametric models for time-to-event data, including the Royston-Parmar spline model, generalized gamma and generalized F distributions. Any user-defined parametric distribution can be fitted, given at least an R function defining the probability density or hazard. There are also tools for fitting and predicting from fully parametric multi-state models.
Author: Christopher Jackson
Maintainer: Christopher Jackson
DESCRIPTION | 16
MD5 | 65
NAMESPACE | 7
R/Gompertz.R | 1
R/Llogis.R |only
R/flexsurvreg.R | 1858 ++++++++++++-----------
R/mstate.R | 184 +-
R/utils.R | 17
build/vignette.rds |binary
inst/NEWS | 41
inst/doc/flexsurv-examples.R | 48
inst/doc/flexsurv-examples.pdf |binary
inst/doc/flexsurv.R | 489 ++----
inst/doc/flexsurv.pdf |binary
man/Llogis.Rd |only
man/flexsurvreg.Rd | 17
man/flexsurvspline.Rd | 10
man/msfit.flexsurvreg.Rd | 39
man/pars.fmsm.Rd |only
man/pmatrix.fs.Rd | 7
man/pmatrix.simfs.Rd | 9
man/sim.fmsm.Rd | 17
man/summary.flexsurvreg.Rd | 11
man/totlos.fs.Rd | 7
man/totlos.simfs.Rd | 9
tests/testthat/test_custom.R | 54
tests/testthat/test_deriv.R | 7
tests/testthat/test_flexsurvreg.R | 47
tests/testthat/test_mstate.R | 78
tests/testthat/test_outputs.R | 4
tests/testthat/test_spline.R | 7
tests/testthat/test_utils.R | 38
vignettes/flexsurv-examples.Rnw | 78
vignettes/flexsurv.Rnw | 3039 ++++++++++++++++++++------------------
vignettes/flexsurv.bib | 224 +-
35 files changed, 3575 insertions(+), 2853 deletions(-)
Title: Sample Size Estimation Functions for Cluster Randomized Trials
Diff between CRTSize versions 0.4 dated 2015-02-02 and 1.0 dated 2015-04-14
Description: Sample size estimation in cluster (group) randomized trials. Contains traditional power-based methods, empirical smoothing (Rotondi and Donner, 2009), and updated meta-analysis techniques (Rotondi and Donner, 2012).
Author: Michael A Rotondi
Maintainer: Michael A Rotondi
DESCRIPTION | 10 +++++-----
MD5 | 10 +++++-----
R/n4incidence.R | 13 ++++++++-----
R/n4means.R | 4 ++--
R/n4props.R | 2 +-
man/n4meansMeta.Rd | 4 ++--
6 files changed, 23 insertions(+), 20 deletions(-)
Title: Manipulations of Triangular Meshes Based on the VCGLIB API
Diff between Rvcg versions 0.10.1 dated 2014-12-22 and 0.11 dated 2015-04-14
Description: Operations on triangular meshes based on VCGLIB. This package
integrates nicely with the R-package "rgl" to render the meshes processed
by Rvcg. The Visualization and Computer Graphics Library (VCG for short) is
an open source portable C++ templated library for manipulation, processing
and displaying with OpenGL of triangle and tetrahedral meshes. The library,
composed by more than 100k lines of code, is released under the GPL
license, and it is the base of most of the software tools of the Visual
Computing Lab of the Italian National Research Council Institute ISTI
(http://vcg.isti.cnr.it), like metro and MeshLab.
The vcglib source is pulled from
trunk (svn://svn.code.sf.net/p/vcg/code/trunk/vcglib) and patched to work
with options determined by the configure script as well as
to work with the header files included by RcppEigen.
Author: Stefan Schlager; the authors of VCGLIB for the included version of the
code
Maintainer: Stefan Schlager
Rvcg-0.10.1/Rvcg/src/vcglib/vcg/space/index/index2D |only
Rvcg-0.10.1/Rvcg/src/vcglib/wrap/miq |only
Rvcg-0.11/Rvcg/DESCRIPTION | 8
Rvcg-0.11/Rvcg/MD5 | 342
Rvcg-0.11/Rvcg/NAMESPACE | 2
Rvcg-0.11/Rvcg/R/Rvcg-package.R | 4
Rvcg-0.11/Rvcg/R/vcgClost.r | 1
Rvcg-0.11/Rvcg/R/vcgKDtree.r | 11
Rvcg-0.11/Rvcg/inst/NEWS.Rd | 18
Rvcg-0.11/Rvcg/man/Rvcg-package.Rd | 7
Rvcg-0.11/Rvcg/man/dummyhead.Rd | 3
Rvcg-0.11/Rvcg/man/humface.Rd | 3
Rvcg-0.11/Rvcg/man/meshintegrity.Rd | 3
Rvcg-0.11/Rvcg/man/setRays.Rd | 3
Rvcg-0.11/Rvcg/man/vcgBary.Rd | 3
Rvcg-0.11/Rvcg/man/vcgBorder.Rd | 3
Rvcg-0.11/Rvcg/man/vcgClean.Rd | 3
Rvcg-0.11/Rvcg/man/vcgClost.Rd | 4
Rvcg-0.11/Rvcg/man/vcgClostKD.Rd | 3
Rvcg-0.11/Rvcg/man/vcgCurve.Rd | 3
Rvcg-0.11/Rvcg/man/vcgGetEdge.Rd | 3
Rvcg-0.11/Rvcg/man/vcgImport.Rd | 3
Rvcg-0.11/Rvcg/man/vcgIsolated.Rd | 3
Rvcg-0.11/Rvcg/man/vcgIsosurface.Rd | 3
Rvcg-0.11/Rvcg/man/vcgKDtree.Rd | 3
Rvcg-0.11/Rvcg/man/vcgMeshres.Rd | 3
Rvcg-0.11/Rvcg/man/vcgNonBorderEdge.Rd | 3
Rvcg-0.11/Rvcg/man/vcgPlyRead.Rd | 3
Rvcg-0.11/Rvcg/man/vcgPlyWrite.Rd | 3
Rvcg-0.11/Rvcg/man/vcgQEdecim.Rd | 3
Rvcg-0.11/Rvcg/man/vcgRaySearch.Rd | 3
Rvcg-0.11/Rvcg/man/vcgSample.Rd | 3
Rvcg-0.11/Rvcg/man/vcgSmooth.Rd | 3
Rvcg-0.11/Rvcg/man/vcgStlWrite.Rd | 3
Rvcg-0.11/Rvcg/man/vcgUniformRemesh.Rd | 3
Rvcg-0.11/Rvcg/man/vcgUpdateNormals.Rd | 3
Rvcg-0.11/Rvcg/man/vcgVFadj.Rd | 3
Rvcg-0.11/Rvcg/src/Rclean.cpp | 8
Rvcg-0.11/Rvcg/src/Rkdtree.cpp | 37
Rvcg-0.11/Rvcg/src/Runiform_resample.cpp | 2
Rvcg-0.11/Rvcg/src/RvcgKD.h | 11
Rvcg-0.11/Rvcg/src/Volume.h | 2
Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/algorithms/autoalign_4pcs.h | 33
Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/algorithms/clean.h | 2039 ++---
Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/algorithms/closest.h | 64
Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/algorithms/clustering.h | 34
Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/algorithms/create/advancing_front.h | 47
Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/algorithms/create/ball_pivoting.h | 286
Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/algorithms/create/marching_cubes.h | 10
Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/algorithms/create/mc_trivial_walker.h | 101
Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/algorithms/create/platonic.h | 221
Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/algorithms/create/resampler.h | 1127 +--
Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/algorithms/geodesic.h | 20
Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/algorithms/harmonic.h | 490 -
Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/algorithms/hole.h | 8
Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/algorithms/implicit_smooth.h |only
Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/algorithms/inside.h | 43
Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/algorithms/local_optimization/tri_edge_collapse_quadric.h | 384 -
Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/algorithms/local_optimization/tri_edge_collapse_quadric_tex.h | 10
Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/algorithms/local_optimization/tri_edge_flip.h | 968 +-
Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/algorithms/mesh_assert.h |only
Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/algorithms/mesh_to_matrix.h |only
Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/algorithms/parametrization/distortion.h | 463 -
Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/algorithms/parametrization/poisson_solver.h | 2
Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/algorithms/parametrization/tangent_field_operators.h | 1515 ++--
Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/algorithms/point_sampling.h | 265
Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/algorithms/pointcloud_normal.h | 49
Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/algorithms/polygon_polychord_collapse.h | 889 +-
Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/algorithms/polygon_support.h | 80
Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/algorithms/quadrangulator.h |only
Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/algorithms/refine.h | 1
Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/algorithms/refine_loop.h | 942 +-
Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/algorithms/smooth.h | 147
Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/algorithms/stat.h | 6
Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/algorithms/symmetry.h | 49
Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/algorithms/update/color.h | 115
Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/algorithms/update/curvature.h | 36
Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/algorithms/update/curvature_fitting.h | 464 -
Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/algorithms/update/flag.h | 80
Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/algorithms/update/normal.h | 41
Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/algorithms/update/quality.h | 20
Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/algorithms/update/selection.h | 3
Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/algorithms/voronoi_processing.h | 113
Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/algorithms/voronoi_volume_sampling.h | 244
Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/allocate.h | 2475 +++---
Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/append.h | 66
Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/base.h | 82
Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/complex.h | 1
Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/exception.h | 17
Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/used_types.h | 1
Rvcg-0.11/Rvcg/src/vcglib/vcg/container/simple_temporary_data.h | 20
Rvcg-0.11/Rvcg/src/vcglib/vcg/math/camera.h | 19
Rvcg-0.11/Rvcg/src/vcglib/vcg/math/gen_normal.h | 103
Rvcg-0.11/Rvcg/src/vcglib/vcg/math/matrix33.h | 2
Rvcg-0.11/Rvcg/src/vcglib/vcg/math/matrix44.h | 2
Rvcg-0.11/Rvcg/src/vcglib/vcg/math/quadric5.h | 1059 +-
Rvcg-0.11/Rvcg/src/vcglib/vcg/math/shot.h | 130
Rvcg-0.11/Rvcg/src/vcglib/vcg/simplex/edge/component.h | 154
Rvcg-0.11/Rvcg/src/vcglib/vcg/simplex/edge/pos.h | 2
Rvcg-0.11/Rvcg/src/vcglib/vcg/simplex/face/base.h | 306
Rvcg-0.11/Rvcg/src/vcglib/vcg/simplex/face/component.h | 50
Rvcg-0.11/Rvcg/src/vcglib/vcg/simplex/face/component_ocf.h | 83
Rvcg-0.11/Rvcg/src/vcglib/vcg/simplex/face/component_polygon.h | 123
Rvcg-0.11/Rvcg/src/vcglib/vcg/simplex/face/pos.h | 677 -
Rvcg-0.11/Rvcg/src/vcglib/vcg/simplex/face/topology.h | 4
Rvcg-0.11/Rvcg/src/vcglib/vcg/simplex/tetrahedron/pos.h | 2
Rvcg-0.11/Rvcg/src/vcglib/vcg/simplex/vertex/component.h | 151
Rvcg-0.11/Rvcg/src/vcglib/vcg/simplex/vertex/component_ocf.h | 350
Rvcg-0.11/Rvcg/src/vcglib/vcg/space/box2.h | 6
Rvcg-0.11/Rvcg/src/vcglib/vcg/space/color4.h | 147
Rvcg-0.11/Rvcg/src/vcglib/vcg/space/colorspace.h | 3664 +++++-----
Rvcg-0.11/Rvcg/src/vcglib/vcg/space/deprecated_point3.h | 7
Rvcg-0.11/Rvcg/src/vcglib/vcg/space/index/base2d.h |only
Rvcg-0.11/Rvcg/src/vcglib/vcg/space/index/closest2d.h |only
Rvcg-0.11/Rvcg/src/vcglib/vcg/space/index/grid_closest2d.h |only
Rvcg-0.11/Rvcg/src/vcglib/vcg/space/index/grid_static_ptr2d.h |only
Rvcg-0.11/Rvcg/src/vcglib/vcg/space/index/grid_util.h | 20
Rvcg-0.11/Rvcg/src/vcglib/vcg/space/index/grid_util2d.h |only
Rvcg-0.11/Rvcg/src/vcglib/vcg/space/index/kdtree/kdtree.h | 623 +
Rvcg-0.11/Rvcg/src/vcglib/vcg/space/index/kdtree/kdtree.h.rej | 111
Rvcg-0.11/Rvcg/src/vcglib/vcg/space/index/kdtree/priorityqueue.h | 188
Rvcg-0.11/Rvcg/src/vcglib/vcg/space/index/kdtree/priorityqueue.h.rej |only
Rvcg-0.11/Rvcg/src/vcglib/vcg/space/index/octree.h | 2
Rvcg-0.11/Rvcg/src/vcglib/vcg/space/index/perfect_spatial_hashing.h | 3062 ++++----
Rvcg-0.11/Rvcg/src/vcglib/vcg/space/index/space_iterators.h | 2
Rvcg-0.11/Rvcg/src/vcglib/vcg/space/index/space_iterators2d.h |only
Rvcg-0.11/Rvcg/src/vcglib/vcg/space/index/spatial_hashing.h | 538 -
Rvcg-0.11/Rvcg/src/vcglib/vcg/space/index/spatial_hashing2d.h |only
Rvcg-0.11/Rvcg/src/vcglib/vcg/space/intersection2.h | 52
Rvcg-0.11/Rvcg/src/vcglib/vcg/space/intersection3.h | 2
Rvcg-0.11/Rvcg/src/vcglib/vcg/space/polygon3.h |only
Rvcg-0.11/Rvcg/src/vcglib/vcg/space/ray2.h | 2
Rvcg-0.11/Rvcg/src/vcglib/vcg/space/rect_packer.h | 2
Rvcg-0.11/Rvcg/src/vcglib/vcg/space/segment2.h | 25
Rvcg-0.11/Rvcg/src/vcglib/vcg/space/tetra3.h | 2
Rvcg-0.11/Rvcg/src/vcglib/vcg/space/texcoord2.h | 75
Rvcg-0.11/Rvcg/src/vcglib/vcg/space/triangle2.h | 183
Rvcg-0.11/Rvcg/src/vcglib/vcg/space/triangle3.h | 171
Rvcg-0.11/Rvcg/src/vcglib/wrap/gl/gl_field.h | 92
Rvcg-0.11/Rvcg/src/vcglib/wrap/gl/glu_tessellator_cap.h | 7
Rvcg-0.11/Rvcg/src/vcglib/wrap/gl/math.h | 33
Rvcg-0.11/Rvcg/src/vcglib/wrap/gl/pick.h | 124
Rvcg-0.11/Rvcg/src/vcglib/wrap/gl/trimesh.h | 320
Rvcg-0.11/Rvcg/src/vcglib/wrap/glw/program.h | 1062 +-
Rvcg-0.11/Rvcg/src/vcglib/wrap/gui/coordinateframe.cpp | 46
Rvcg-0.11/Rvcg/src/vcglib/wrap/gui/coordinateframe.h | 4
Rvcg-0.11/Rvcg/src/vcglib/wrap/gui/rubberband.cpp | 4
Rvcg-0.11/Rvcg/src/vcglib/wrap/gui/trackmode.cpp | 354
Rvcg-0.11/Rvcg/src/vcglib/wrap/gui/trackmode.h | 2
Rvcg-0.11/Rvcg/src/vcglib/wrap/gui/trackutils.h | 200
Rvcg-0.11/Rvcg/src/vcglib/wrap/gui/view.h | 49
Rvcg-0.11/Rvcg/src/vcglib/wrap/igl |only
Rvcg-0.11/Rvcg/src/vcglib/wrap/io_trimesh/export_dxf.h | 5
Rvcg-0.11/Rvcg/src/vcglib/wrap/io_trimesh/export_field.h | 83
Rvcg-0.11/Rvcg/src/vcglib/wrap/io_trimesh/export_idtf.h | 4
Rvcg-0.11/Rvcg/src/vcglib/wrap/io_trimesh/export_obj.h | 19
Rvcg-0.11/Rvcg/src/vcglib/wrap/io_trimesh/export_off.h | 272
Rvcg-0.11/Rvcg/src/vcglib/wrap/io_trimesh/export_ply.h | 1214 +--
Rvcg-0.11/Rvcg/src/vcglib/wrap/io_trimesh/export_stl.h | 156
Rvcg-0.11/Rvcg/src/vcglib/wrap/io_trimesh/export_u3d.h | 423 -
Rvcg-0.11/Rvcg/src/vcglib/wrap/io_trimesh/import_asc.h | 4
Rvcg-0.11/Rvcg/src/vcglib/wrap/io_trimesh/import_ctm.h | 3
Rvcg-0.11/Rvcg/src/vcglib/wrap/io_trimesh/import_field.h | 1
Rvcg-0.11/Rvcg/src/vcglib/wrap/io_trimesh/import_gts.h | 2
Rvcg-0.11/Rvcg/src/vcglib/wrap/io_trimesh/import_nvm.h | 89
Rvcg-0.11/Rvcg/src/vcglib/wrap/io_trimesh/import_obj.h | 58
Rvcg-0.11/Rvcg/src/vcglib/wrap/io_trimesh/import_off.h | 19
Rvcg-0.11/Rvcg/src/vcglib/wrap/io_trimesh/import_out.h | 102
Rvcg-0.11/Rvcg/src/vcglib/wrap/io_trimesh/import_ply.h | 1842 ++---
Rvcg-0.11/Rvcg/src/vcglib/wrap/io_trimesh/import_ptx.h | 782 +-
Rvcg-0.11/Rvcg/src/vcglib/wrap/io_trimesh/precision.h |only
Rvcg-0.11/Rvcg/src/vcglib/wrap/qt/gl_label.h | 14
Rvcg-0.11/Rvcg/src/vcglib/wrap/system/qgetopt.cpp | 15
Rvcg-0.11/Rvcg/src/vcglib/wrap/system/qgetopt.h | 7
174 files changed, 17950 insertions(+), 16168 deletions(-)
Title: Analysis of Dose-Response Curves
Diff between drc versions 2.5-11 dated 2015-04-13 and 2.5-12 dated 2015-04-14
Description: Analysis of dose-response data is made available through a suite of flexible and versatile model fitting and after-fitting functions.
Author: Christian Ritz
Maintainer: Christian Ritz
DESCRIPTION | 8 -
MD5 | 8 -
R/plot.drc.R | 271 ++++++++++++++++++++++++++++++--------------------------
man/ED.drc.Rd | 3
man/plot.drc.Rd | 34 +++----
5 files changed, 175 insertions(+), 149 deletions(-)
Title: Analysis of Ecological Data : Exploratory and Euclidean Methods
in Environmental Sciences
Diff between ade4 versions 1.6-2 dated 2013-11-20 and 1.7-2 dated 2015-04-14
Description: Multivariate data analysis and graphical display.
Author: Stéphane Dray
Maintainer: Aurélie Siberchicot
ChangeLog | 353 ++++++++++++++++++++
DESCRIPTION | 21 -
MD5 | 781 +++++++++++++++++++++++----------------------
NAMESPACE | 56 ++-
R/add.scatter.R | 2
R/between.R | 26 +
R/betwitdpcoa.R |only
R/coinertia.R | 4
R/combine.4thcorner.R | 1
R/costatis.R | 33 +
R/dist.dudi.R | 4
R/dpcoa.R | 284 +++++++---------
R/dudi.R | 27 +
R/foucart.R | 4
R/fourthcorner.R | 4
R/fourthcorner.rlq.R | 16
R/kplot.foucart.R | 4
R/kplot.mcoa.R | 8
R/kplot.mfa.R | 4
R/kplot.pta.R | 16
R/kplot.sepan.R | 10
R/kplot.statis.R | 4
R/krandboot.R |only
R/krandxval.R |only
R/ktab.R | 93 +++--
R/ktab.data.frame.R | 5
R/ktab.list.df.R | 4
R/ktab.list.dudi.R | 7
R/ktab.match2ktabs.R | 4
R/ktab.within.R | 6
R/mbpcaiv.R |only
R/mbpls.R |only
R/mcoa.R | 29 -
R/mdpcoa.R | 10
R/mfa.R | 4
R/multiblock.R |only
R/multispati.R | 4
R/orthobasis.R | 104 ++---
R/plot.4thcorner.R | 36 +-
R/print.4thcorner.R | 2
R/procuste.R | 142 ++++----
R/pta.R | 27 -
R/randboot.R |only
R/randtest.between.R | 21 -
R/randtest.rlq.R | 2
R/randxval.R |only
R/rlq.R | 47 +-
R/s.image.R | 36 +-
R/s.kde2d.R | 1
R/s.logo.R | 1
R/scatterutil.R | 2
R/sepan.R | 1
R/statico.R | 43 ++
R/statis.R | 4
R/testdim.R | 16
R/utilities.R | 5
R/within.R | 18 +
data/abouheif.eg.rda |binary
data/acacia.rda |binary
data/aminoacyl.rda |binary
data/apis108.rda |binary
data/aravo.rda |binary
data/ardeche.rda |binary
data/arrival.rda |binary
data/atlas.rda |binary
data/atya.rda |binary
data/avijons.rda |binary
data/avimedi.rda |binary
data/aviurba.rda |binary
data/bacteria.rda |binary
data/banque.rda |binary
data/baran95.rda |binary
data/bf88.rda |binary
data/bordeaux.rda |binary
data/bsetal97.rda |binary
data/buech.rda |binary
data/butterfly.rda |binary
data/capitales.rda |binary
data/carni19.rda |binary
data/carni70.rda |binary
data/carniherbi49.rda |binary
data/casitas.rda |binary
data/chatcat.rda |binary
data/chats.rda |binary
data/chazeb.rda |binary
data/chevaine.rda |binary
data/chickenk.rda |only
data/clementines.rda |binary
data/cnc2003.rda |binary
data/coleo.rda |binary
data/corvus.rda |binary
data/datalist | 2
data/deug.rda |binary
data/doubs.rda |binary
data/dunedata.rda |binary
data/ecg.rda |binary
data/ecomor.rda |binary
data/elec88.rda |binary
data/escopage.rda |binary
data/euro123.rda |binary
data/fission.rda |binary
data/friday87.rda |binary
data/fruits.rda |binary
data/ggtortoises.rda |binary
data/granulo.rda |binary
data/hdpg.rda |binary
data/housetasks.rda |binary
data/humDNAm.rda |binary
data/ichtyo.rda |binary
data/irishdata.rda |binary
data/julliot.rda |binary
data/jv73.rda |binary
data/kcponds.rda |binary
data/lascaux.rda |binary
data/lizards.rda |binary
data/macaca.rda |binary
data/macon.rda |binary
data/macroloire.rda |binary
data/mafragh.rda |binary
data/maples.rda |binary
data/mariages.rda |binary
data/meau.rda |binary
data/meaudret.rda |binary
data/microsatt.rda |binary
data/mjrochet.rda |binary
data/mollusc.rda |binary
data/monde84.rda |binary
data/morphosport.rda |binary
data/newick.eg.rda |binary
data/njplot.rda |binary
data/olympic.rda |binary
data/oribatid.rda |binary
data/ours.rda |binary
data/palm.rda |binary
data/pap.rda |binary
data/pcw.rda |only
data/perthi02.rda |binary
data/piosphere.rda |binary
data/presid2002.rda |binary
data/procella.rda |binary
data/rankrock.rda |binary
data/rhizobium.rda |binary
data/rhone.rda |binary
data/rpjdl.rda |binary
data/santacatalina.rda |binary
data/sarcelles.rda |binary
data/seconde.rda |binary
data/skulls.rda |binary
data/steppe.rda |binary
data/syndicats.rda |binary
data/t3012.rda |binary
data/tarentaise.rda |binary
data/taxo.eg.rda |binary
data/tintoodiel.rda |binary
data/tithonia.rda |binary
data/tortues.rda |binary
data/toxicity.rda |binary
data/trichometeo.rda |binary
data/ungulates.rda |binary
data/vegtf.rda |binary
data/veuvage.rda |binary
data/westafrica.rda |binary
data/woangers.rda |binary
data/worksurv.rda |binary
data/yanomama.rda |binary
data/zealand.rda |binary
man/EH.Rd | 2
man/PI2newick.Rd | 2
man/abouheif.eg.Rd | 2
man/acacia.Rd | 19 -
man/add.scatter.Rd | 103 +++--
man/ade4.package.Rd | 2
man/adegraphicsLoaded.Rd |only
man/aminoacyl.Rd | 2
man/amova.Rd | 2
man/aravo.Rd | 25 -
man/ardeche.Rd | 6
man/area.plot.Rd | 172 +++++----
man/as.taxo.Rd | 2
man/atlas.Rd | 89 +++--
man/atya.Rd | 26 -
man/avijons.Rd | 104 +++--
man/avimedi.Rd | 40 +-
man/bacteria.Rd | 11
man/banque.Rd | 8
man/baran95.Rd | 64 ++-
man/between.Rd | 30 +
man/betweencoinertia.Rd | 4
man/bf88.Rd | 31 +
man/bsetal97.Rd | 2
man/buech.Rd | 25 -
man/butterfly.Rd | 29 +
man/bwca.dpcoa.Rd |only
man/cailliez.Rd | 2
man/capitales.Rd | 57 ++-
man/carni70.Rd | 9
man/cca.Rd | 99 +++--
man/chats.Rd | 40 +-
man/chazeb.Rd | 3
man/chevaine.Rd | 67 +--
man/chickenk.Rd |only
man/clementines.Rd | 41 +-
man/cnc2003.Rd | 1
man/coinertia.Rd | 21 -
man/coleo.Rd | 27 +
man/corkdist.Rd | 26 -
man/corvus.Rd | 14
man/costatis.Rd | 9
man/costatis.randtest.Rd |only
man/deug.Rd | 15
man/disc.Rd | 2
man/discrimin.Rd | 5
man/discrimin.coa.Rd | 2
man/dist.binary.Rd | 2
man/dist.dudi.Rd | 2
man/dist.genet.Rd | 2
man/dist.neig.Rd | 2
man/dist.prop.Rd | 24 -
man/dist.quant.Rd | 24 -
man/divc.Rd | 2
man/divcmax.Rd | 24 -
man/dotchart.phylog.Rd | 2
man/doubs.Rd | 50 +-
man/dpcoa.Rd | 58 ++-
man/dudi.Rd | 5
man/dudi.acm.Rd | 26 +
man/dudi.coa.Rd | 16
man/dudi.dec.Rd | 2
man/dudi.fca.Rd | 11
man/dudi.hillsmith.Rd | 18 -
man/dudi.mix.Rd | 16
man/dudi.nsc.Rd | 12
man/dudi.pca.Rd | 51 +-
man/dudi.pco.Rd | 2
man/ecg.Rd | 2
man/ecomor.Rd | 36 +-
man/elec88.Rd | 44 +-
man/euro123.Rd | 29 +
man/foucart.Rd | 12
man/friday87.Rd | 7
man/fruits.Rd | 31 +
man/gearymoran.Rd | 19 -
man/ggtortoises.Rd | 35 +-
man/granulo.Rd | 16
man/gridrowcol.Rd | 37 +-
man/hdpg.Rd | 24 -
man/housetasks.Rd | 11
man/humDNAm.Rd | 4
man/inertia.dudi.Rd | 2
man/irishdata.Rd | 45 ++
man/is.euclid.Rd | 2
man/julliot.Rd | 94 +++--
man/jv73.Rd | 33 +
man/kcponds.Rd | 50 +-
man/kdist.Rd | 2
man/kdist2ktab.Rd | 15
man/kdisteuclid.Rd | 39 +-
man/kplot.foucart.Rd | 8
man/kplot.mcoa.Rd | 12
man/kplot.mfa.Rd | 3
man/kplot.pta.Rd | 11
man/kplot.sepan.Rd | 38 +-
man/kplot.statis.Rd | 14
man/krandtest.Rd | 2
man/ktab.Rd | 18 -
man/ktab.data.frame.Rd | 2
man/ktab.list.df.Rd | 4
man/ktab.list.dudi.Rd | 18 -
man/ktab.within.Rd | 2
man/lascaux.Rd | 38 +-
man/lingoes.Rd | 2
man/lizards.Rd | 2
man/macaca.Rd | 22 -
man/macroloire.Rd | 4
man/mafragh.Rd | 86 +++-
man/mantel.randtest.Rd | 2
man/mantel.rtest.Rd | 2
man/maples.Rd | 5
man/mariages.Rd | 22 -
man/mbpcaiv.Rd |only
man/mbpls.Rd |only
man/mcoa.Rd | 2
man/mdpcoa.Rd | 316 +++++++++---------
man/meau.Rd | 25 +
man/meaudret.Rd | 25 +
man/mfa.Rd | 2
man/microsatt.Rd | 12
man/mjrochet.Rd | 22 -
man/mld.Rd | 2
man/mollusc.Rd | 26 +
man/mstree.Rd | 42 +-
man/multiblock.Rd |only
man/multispati.Rd | 71 ++--
man/multispati.randtest.Rd | 4
man/multispati.rtest.Rd | 4
man/neig.Rd | 91 ++---
man/newick.eg.Rd | 4
man/newick2phylog.Rd | 10
man/niche.Rd | 41 +-
man/nipals.Rd | 34 +
man/njplot.Rd | 2
man/olympic.Rd | 31 +
man/optimEH.Rd | 2
man/oribatid.Rd | 17
man/originality.Rd | 2
man/orisaved.Rd | 2
man/orthobasis.Rd | 119 ++++--
man/orthogram.Rd | 4
man/ours.Rd | 6
man/palm.Rd | 3
man/pap.Rd | 3
man/pcaiv.Rd | 2
man/pcaivortho.Rd | 43 +-
man/pcw.Rd |only
man/phylog.Rd | 16
man/plot.between.Rd | 37 +-
man/plot.phylog.Rd | 2
man/plot.within.Rd | 34 +
man/presid2002.Rd | 64 ++-
man/procella.Rd | 2
man/procuste.Rd | 78 ++--
man/procuste.randtest.Rd | 2
man/procuste.rtest.Rd | 2
man/pta.Rd | 7
man/quasieuclid.Rd | 2
man/randEH.Rd | 2
man/randboot.Rd |only
man/randboot.multiblock.Rd |only
man/randtest.amova.Rd | 2
man/randtest.between.Rd | 2
man/randtest.coinertia.Rd | 2
man/randtest.discrimin.Rd | 2
man/randtest.pcaiv.Rd | 2
man/randxval.Rd |only
man/rankrock.Rd | 7
man/reconst.Rd | 2
man/rhizobium.Rd | 156 ++++----
man/rlq.Rd | 2
man/rpjdl.Rd | 14
man/rtest.Rd | 7
man/s.chull.Rd | 11
man/s.class.Rd | 58 +--
man/s.corcircle.Rd | 20 -
man/s.distri.Rd | 47 +-
man/s.image.Rd | 62 +--
man/s.kde2d.Rd | 17
man/s.label.Rd | 43 +-
man/s.logo.Rd | 42 +-
man/s.match.Rd | 24 -
man/s.match.class.Rd | 37 +-
man/s.traject.Rd | 19 -
man/s.value.Rd | 42 +-
man/santacatalina.Rd | 22 -
man/sarcelles.Rd | 22 -
man/scatter.acm.Rd | 8
man/scatter.coa.Rd | 29 +
man/scatter.dudi.Rd | 8
man/scatter.fca.Rd | 9
man/scatterutil.Rd | 3
man/sco.class.Rd | 2
man/sco.distri.Rd | 66 +--
man/sco.gauss.Rd | 2
man/sco.label.Rd | 2
man/sco.match.Rd | 2
man/score.Rd | 6
man/score.acm.Rd | 4
man/score.coa.Rd | 6
man/score.pca.Rd | 2
man/seconde.Rd | 6
man/skulls.Rd | 3
man/statico.Rd | 4
man/statico.krandtest.Rd |only
man/statis.Rd | 11
man/supcol.Rd | 20 -
man/suprow.Rd | 47 +-
man/symbols.phylog.Rd | 2
man/t3012.Rd | 16
man/table.paint.Rd | 1
man/table.phylog.Rd | 2
man/table.value.Rd | 21 -
man/tarentaise.Rd | 2
man/testdim.Rd | 14
man/testdim.multiblock.Rd |only
man/tintoodiel.Rd | 40 +-
man/tortues.Rd | 18 -
man/toxicity.Rd | 15
man/triangle.class.Rd | 30 -
man/triangle.plot.Rd | 28 -
man/trichometeo.Rd | 18 -
man/variance.phylog.Rd | 2
man/vegtf.Rd | 36 +-
man/wca.rlq.Rd | 5
man/westafrica.Rd | 112 +++---
man/within.Rd | 27 +
man/withincoinertia.Rd | 6
man/withinpca.Rd | 8
man/witwit.coa.Rd | 16
man/worksurv.Rd | 16
man/zealand.Rd | 42 +-
src/adesub.c | 14
src/adesub.h | 1
src/fourthcorner.c | 2
src/tests.c | 4
403 files changed, 4569 insertions(+), 2887 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2014-12-21 0.5
2013-11-20 0.4
2012-08-01 0.2
2011-02-03 0.1
Title: Distance Measures for Time Series Data
Diff between TSdist versions 2.1 dated 2015-03-31 and 2.2 dated 2015-04-14
Description: A set of commonly used distance measures and some additional functions which, although initially not designed for this purpose, can be used to measure the dissimilarity between time series. These measures can be used to perform clustering, classification or other data mining tasks which require the definition of a distance measure between time series.
Author: Usue Mori, Alexander Mendiburu, J.A. Lozano
Maintainer: Usue Mori
DESCRIPTION | 8 ++++----
MD5 | 6 +++---
man/TSdist-package.Rd | 5 ++---
man/lb.keoghDistance.Rd | 2 +-
4 files changed, 10 insertions(+), 11 deletions(-)
Title: Parallel Programming Tools for Rcpp
Diff between RcppParallel versions 4.3.6 dated 2015-03-10 and 4.3.8 dated 2015-04-14
Description: High level functions for doing parallel programming with Rcpp.
For example, the parallelFor() function can be used to convert the work of
a standard serial "for" loop into a parallel one and the parallelReduce()
function can be used for accumulating aggregate or other values.
Author: JJ Allaire [aut, cre],
Romain Francois [aut, cph],
Gregory Vandenbrouck [aut],
Marcus Geelnard [aut, cph] (TinyThread library,
http://tinythreadpp.bitsnbites.eu/),
RStudio [cph],
Intel [aut, cph] (Intel TBB library,
https://www.threadingbuildingblocks.org/),
Microsoft [cph]
Maintainer: JJ Allaire
RcppParallel-4.3.6/RcppParallel/README.md |only
RcppParallel-4.3.8/RcppParallel/DESCRIPTION | 12 +--
RcppParallel-4.3.8/RcppParallel/MD5 | 34 +++++---
RcppParallel-4.3.8/RcppParallel/NEWS | 11 +-
RcppParallel-4.3.8/RcppParallel/R/build.R | 24 +++---
RcppParallel-4.3.8/RcppParallel/R/hooks.R | 15 +++
RcppParallel-4.3.8/RcppParallel/inst/include/RcppParallel.h | 2
RcppParallel-4.3.8/RcppParallel/inst/include/RcppParallel/TBB.h | 1
RcppParallel-4.3.8/RcppParallel/inst/include/tthread/tinythread.h | 1
RcppParallel-4.3.8/RcppParallel/man/RcppParallel-package.Rd | 4 -
RcppParallel-4.3.8/RcppParallel/src/Makevars | 39 ++++++----
RcppParallel-4.3.8/RcppParallel/src/tbb/build/SunOS.suncc.inc | 2
RcppParallel-4.3.8/RcppParallel/src/tbb/build/linux.clang.inc | 2
RcppParallel-4.3.8/RcppParallel/tests/testthat/cpp/malloc.cpp |only
RcppParallel-4.3.8/RcppParallel/tests/testthat/pkg |only
RcppParallel-4.3.8/RcppParallel/tests/testthat/test-malloc.R |only
RcppParallel-4.3.8/RcppParallel/tests/testthat/test-pkg.R |only
17 files changed, 93 insertions(+), 54 deletions(-)
Title: Testing Homoscedasticity, Multivariate Normality, and Missing
Completely at Random
Diff between MissMech versions 1.0.1 dated 2014-01-20 and 1.0.2 dated 2015-04-14
Description: To test whether the missing data mechanism, in a set of incompletely observed data, is one of missing completely at random (MCAR).
For detailed description see Jamshidian, M. Jalal, S., and Jansen, C. (2014). "MissMech: An R Package for Testing Homoscedasticity, Multivariate Normality, and Missing Completely at Random (MCAR)," Journal of Statistical Software, 56(6), 1-31. URL http://www.jstatsoft.org/v56/i06/.
Author: Mortaza Jamshidian, Siavash Jalal, and Camden Jansen
Maintainer: Mortaza Jamshidian
MissMech-1.0.1/MissMech/R/AndersonDarling.r |only
MissMech-1.0.2/MissMech/DESCRIPTION | 13 +++++++------
MissMech-1.0.2/MissMech/MD5 | 10 +++++-----
MissMech-1.0.2/MissMech/NAMESPACE | 7 +++++++
MissMech-1.0.2/MissMech/R/AndersonDarling.R |only
MissMech-1.0.2/MissMech/man/MissMech-package.Rd | 4 ++--
MissMech-1.0.2/MissMech/man/TestMCARNormality.Rd | 8 ++++----
7 files changed, 25 insertions(+), 17 deletions(-)
Title: Lucid Printing of Floating Point Numbers
Diff between lucid versions 1.1 dated 2015-02-10 and 1.2 dated 2015-04-14
Description: Print vectors (and data frames) of floating point numbers using a non-scientific format optimized for human readers. Vectors of numbers are rounded using significant digits, aligned at the decimal point, and all zeros trailing the decimal point are dropped.
Author: Kevin Wright
Maintainer: Kevin Wright
DESCRIPTION | 10 +--
MD5 | 26 +++++-----
NAMESPACE | 2
NEWS | 4 +
R/lucid.r | 13 +++--
R/vc.r | 35 ++++++++++++-
inst/doc/lucid_printing.R | 31 ++++++++++++
inst/doc/lucid_printing.Rnw | 78 +++++++++++++++++++------------
inst/doc/lucid_printing.pdf |binary
man/vc.Rd | 16 ++++--
vignettes/figure/unnamed-chunk-5-1.pdf |binary
vignettes/lucid.bib | 7 ++
vignettes/lucid_printing-concordance.tex | 4 -
vignettes/lucid_printing.Rnw | 78 +++++++++++++++++++------------
14 files changed, 215 insertions(+), 89 deletions(-)
Title: Gamma Lasso Regression
Diff between gamlr versions 1.13 dated 2015-04-01 and 1.13-1 dated 2015-04-14
Description: The gamma lasso algorithm provides regularization paths corresponding to a range of non-convex cost functions between L0 and L1 norms. As much as possible, usage for this package is analogous to that for the glmnet package (which does the same thing for penalization between L1 and L2 norms). For details see: Taddy (2015), One-Step Estimator Paths for Concave Regularization, http://arxiv.org/abs/1308.5623.
Author: Matt Taddy
Maintainer: Matt Taddy
DESCRIPTION | 6 +++---
MD5 | 4 ++--
src/gamlr.c | 4 ----
3 files changed, 5 insertions(+), 9 deletions(-)
Title: Exploration and Graphics for RivEr Trends (EGRET)
Diff between EGRET versions 2.1.1 dated 2015-02-17 and 2.2.0 dated 2015-04-14
Description: Statistics and graphics for streamflow history,
water quality trends, and the statistical modeling algorithm: Weighted
Regressions on Time, Discharge, and Season (WRTDS).
Author: Robert Hirsch [aut],
Laura DeCicco [aut, cre]
Maintainer: Laura DeCicco
EGRET-2.1.1/EGRET/vignettes/EGRET-concordance.tex |only
EGRET-2.1.1/EGRET/vignettes/figure |only
EGRET-2.1.1/EGRET/vignettes/framed.sty |only
EGRET-2.2.0/EGRET/DESCRIPTION | 8
EGRET-2.2.0/EGRET/MD5 | 120 +--------
EGRET-2.2.0/EGRET/NEWS | 11
EGRET-2.2.0/EGRET/R/EGRET.R | 2
EGRET-2.2.0/EGRET/R/fluxUnit.R | 3
EGRET-2.2.0/EGRET/R/modelEstimation.R | 11
EGRET-2.2.0/EGRET/R/objectDefinitions.R | 281 +++++++++++-----------
EGRET-2.2.0/EGRET/R/plotFlowSingle.R | 9
EGRET-2.2.0/EGRET/R/sysdata.rda |binary
EGRET-2.2.0/EGRET/README.md | 2
EGRET-2.2.0/EGRET/build/vignette.rds |binary
EGRET-2.2.0/EGRET/inst/CITATION |only
EGRET-2.2.0/EGRET/inst/doc/EGRET.Rnw | 4
EGRET-2.2.0/EGRET/inst/doc/EGRET.pdf |binary
EGRET-2.2.0/EGRET/man/EGRET-package.Rd | 2
EGRET-2.2.0/EGRET/man/fluxUnit-class.Rd | 2
EGRET-2.2.0/EGRET/man/modelEstimation.Rd | 6
EGRET-2.2.0/EGRET/man/plotFlowSingle.Rd | 9
EGRET-2.2.0/EGRET/vignettes/EGRET.Rnw | 4
22 files changed, 222 insertions(+), 252 deletions(-)
Title: Automatic Creation of Dummies with Support for Predictive
Modeling
Diff between dummy versions 0.1.0 dated 2014-11-07 and 0.1.2 dated 2015-04-14
Description: Efficiently create dummies of all factors and character vectors in a data frame. Support is included for learning the categories on one data set (e.g., a training set) and deploying them on another (e.g., a test set).
Author: Michel Ballings and Dirk Van den Poel
Maintainer: Michel Ballings
DESCRIPTION | 6 +++---
MD5 | 10 +++++++---
R/categories.R | 4 +++-
R/dummy.R | 1 +
R/dummyNews.R |only
R/zzz.R |only
inst |only
man/dummyNews.Rd |only
8 files changed, 14 insertions(+), 7 deletions(-)
Title: R Console Bindings for the 'Domino Command-Line Client'
Diff between domino versions 0.2-1 dated 2014-09-09 and 0.2-5 dated 2015-04-14
Description: A wrapper on top of the 'Domino Command-Line Client'. It lets you run 'Domino' commands (e.g., "run", "upload", "download") directly from your R environment. Under the hood, it uses R's system function to run the 'Domino' executable, which must be installed as a prerequisite.
Author: Jacek Glodek
Maintainer: Nick Elprin
DESCRIPTION | 12 +++----
MD5 | 9 +++--
R/domino.R | 78 +++++++++++++++++++++++++++++++++++++++++++++-----
man/domino-package.Rd | 8 ++---
man/domino.login.Rd | 13 ++++++--
man/domino.sync.Rd |only
6 files changed, 96 insertions(+), 24 deletions(-)
Title: Descriptive Statistics
Diff between descr versions 1.0.4 dated 2014-11-04 and 1.1 dated 2015-04-14
Description: Weighted frequency and contingency tables of categorical
variables and of the comparison of the mean value of a numerical
variable by the levels of a factor, and methods to produce xtable
objects of the tables and to plot them. There are also functions to
facilitate the character encoding conversion of objects, to quickly
convert fixed width files into csv ones, and to export a data.frame to
a text file with the necessary R and SPSS codes to reread the data.
Author: Jakson Aquino. Includes R source code and/or documentation
written by Dirk Enzmann, Marc Schwartz, Nitin Jain, and Stefan
Kraft
Maintainer: Jakson Aquino
DESCRIPTION | 20 ++--
MD5 | 24 ++---
NEWS | 14 +++
R/CrossTable.R | 49 +++++------
R/crosstab.R | 75 +++++++++--------
inst/po/pt_BR/LC_MESSAGES/R-descr.mo |binary
inst/po/pt_BR/LC_MESSAGES/descr.mo |binary
man/crosstab.Rd | 21 ++--
man/plot.CrossTable.Rd | 2
po/R-descr.pot | 142 ++++++++++++++++-----------------
po/R-pt_BR.po | 150 +++++++++++++++++------------------
po/descr.pot | 16 +--
po/pt_BR.po | 22 ++---
13 files changed, 281 insertions(+), 254 deletions(-)