Title: Latent Semantic Analysis
Description: The basic idea of latent semantic analysis (LSA) is,
that text do have a higher order (=latent semantic) structure which,
however, is obscured by word usage (e.g. through the use of synonyms
or polysemy). By using conceptual indices that are derived statistically
via a truncated singular value decomposition (a two-mode factor analysis)
over a given document-term matrix, this variability problem can be overcome.
Author: Fridolin Wild
Maintainer: Fridolin Wild <f.wild@open.ac.uk>
Diff between lsa versions 0.73 dated 2014-04-02 and 0.73.1 dated 2015-05-08
DESCRIPTION | 8 ++++---- MD5 | 6 +++--- NAMESPACE | 3 +++ R/textmatrix.R | 2 +- 4 files changed, 11 insertions(+), 8 deletions(-)
Title: Random Projection Ensemble Classification
Description: Implements the methodology of "Cannings, T. I. and Samworth, R. J. (2015) Random projection ensemble classification. http://arxiv.org/abs/1504.04595". The random projection ensemble classifier is a very general method for classification of high-dimensional data, based on careful combination of the results of applying an arbitrary base classifier to random projections of the feature vectors into a lower-dimensional space. The random projections are divided into non-overlapping blocks, and within each block the projection yielding the smallest estimate of the test error is selected. The random projection ensemble classifier then aggregates the results of applying the base classifier on the selected projections, with a data-driven voting threshold to determine the final assignment.
Author: Timothy I. Cannings and Richard J. Samworth
Maintainer: Timothy I. Cannings <t.cannings@statslab.cam.ac.uk>
Diff between RPEnsemble versions 0.1 dated 2015-05-05 and 0.2 dated 2015-05-08
DESCRIPTION | 8 ++++---- MD5 | 10 +++++----- man/RPEnsemble-package.Rd | 4 ++-- man/RPEnsembleClass.Rd | 2 +- man/RPParallel.Rd | 4 ++-- man/RPalpha.Rd | 2 +- 6 files changed, 15 insertions(+), 15 deletions(-)
Title: General Package for Meta-Analysis
Description: User-friendly general package providing standard methods for meta-analysis:
- fixed effect and random effects meta-analysis;
- several plots (forest, funnel, Galbraith / radial, L'Abbe, Baujat, bubble);
- statistical tests and trim-and-fill method to evaluate bias in meta-analysis;
- import data from RevMan 5;
- prediction interval, Hartung-Knapp and Paule-Mandel method for random effects model;
- cumulative meta-analysis and leave-one-out meta-analysis;
- meta-regression (if R package 'metafor' is installed).
Author: Guido Schwarzer [cre, aut]
Maintainer: Guido Schwarzer <sc@imbi.uni-freiburg.de>
Diff between meta versions 4.1-0 dated 2015-02-04 and 4.2-0 dated 2015-05-08
DESCRIPTION | 10 ++--- MD5 | 40 ++++++++++----------- NEWS | 35 ++++++++++++++++++ R/catmeth.R | 13 +++++- R/ci.R | 6 +-- R/forest.meta.R | 92 +++++++++++++++++++++++++++++++++---------------- R/kentau.R | 2 - R/meta-internal.R | 3 + R/metacont.R | 41 +++++++++++++++------ R/print.meta.R | 5 +- R/print.summary.meta.R | 10 +++-- R/settings.meta.R | 8 ++++ R/summary.meta.R | 1 R/update.meta.R | 3 + inst/COPYRIGHTS | 7 +-- man/forest.Rd | 5 ++ man/metabin.Rd | 4 +- man/metacont.Rd | 38 ++++++++++++++++++++ man/metacr.Rd | 6 +-- man/read.rm5.Rd | 6 +-- man/update.meta.Rd | 5 ++ 21 files changed, 246 insertions(+), 94 deletions(-)
Title: Estimate Correlations Between Repeatedly Measured Endpoints
(E.g., Reliability) Based on Linear Mixed-Effects Models
Description: In clinical practice and research settings in medicine and the behavioral sciences, it is often of interest to quantify the correlation of a continuous endpoint that was repeatedly measured (e.g., test-retest correlations, ICC, etc.). This package allows for estimating these correlations based on mixed-effects models. Part of this software has been developed using funding provided from the European Union's 7th Framework Programme for research, technological development and demonstration under Grant Agreement no 602552.
Author: Wim Van der Elst, Geert Molenberghs, Dieter Hilgers, & Nicole Heussen
Maintainer: Wim Van der Elst <Wim.vanderelst@gmail.com>
Diff between CorrMixed versions 0.1-1 dated 2015-04-29 and 0.1-11 dated 2015-05-08
DESCRIPTION | 8 +++--- MD5 | 32 +++++++++++++-------------- R/Explore.WS.Corr.R | 14 ++--------- R/Fract.Poly.R | 2 + R/Spaghetti.Plot.R | 28 ++++++++++++----------- R/WS.Corr.Mixed.R | 52 ++++++++++++++++++++++---------------------- R/WS.Corr.Mixed.SAS.R | 14 +++++------ R/plot.WS.Corr.Mixed.R | 36 ++++++++++++++++-------------- man/Explore.WS.Corr.Rd | 7 ++--- man/Fract.Poly.Rd | 2 - man/Heatmap.Rd | 2 - man/Model.Fit.Rd | 2 - man/Spaghetti.Plot.Rd | 6 +++-- man/WS.Corr.Mixed.Rd | 7 +++-- man/WS.Corr.Mixed.SAS.Rd | 10 ++++---- man/plot.Explore.WS.Corr.Rd | 4 +-- man/plot.WS.Corr.Mixed.Rd | 2 - 17 files changed, 114 insertions(+), 114 deletions(-)
Title: R Interface to X-13-ARIMA-SEATS
Description: Easy-to-use interface to X-13-ARIMA-SEATS, the
seasonal adjustment software by the US Census Bureau. It offers full
access to almost all options and outputs of X-13, including X-11 and SEATS,
automatic ARIMA model search, outlier detection and support for user
defined holiday variables, such as Chinese New Year or Indian Diwali. It
also includes a Shiny-based graphical user interface. Seasonal does not
contain the binaries of X-13, which must be installed separately. See the
README file or the vignette for installation notes.
Author: Christoph Sax
Maintainer: Christoph Sax <christoph.sax@gmail.com>
Diff between seasonal versions 0.80.0 dated 2015-02-06 and 0.90.0 dated 2015-05-08
seasonal-0.80.0/seasonal/data/cntrade.RData |only seasonal-0.90.0/seasonal/DESCRIPTION | 22 seasonal-0.90.0/seasonal/MD5 | 93 +-- seasonal-0.90.0/seasonal/NAMESPACE | 2 seasonal-0.90.0/seasonal/NEWS | 30 + seasonal-0.90.0/seasonal/R/deparse.R | 6 seasonal-0.90.0/seasonal/R/detect.R | 10 seasonal-0.90.0/seasonal/R/diagnostics.R | 7 seasonal-0.90.0/seasonal/R/extractors.R | 3 seasonal-0.90.0/seasonal/R/inspect-sub.R |only seasonal-0.90.0/seasonal/R/inspect.R | 586 ++++++++++++++++------- seasonal-0.90.0/seasonal/R/out.R | 3 seasonal-0.90.0/seasonal/R/plot.R | 50 + seasonal-0.90.0/seasonal/R/read_est.R | 3 seasonal-0.90.0/seasonal/R/seas.R | 43 + seasonal-0.90.0/seasonal/R/seasonal-package.R | 2 seasonal-0.90.0/seasonal/R/series.R | 17 seasonal-0.90.0/seasonal/R/spclist.R | 2 seasonal-0.90.0/seasonal/R/static.R | 3 seasonal-0.90.0/seasonal/R/summary.R | 5 seasonal-0.90.0/seasonal/README.md | 45 + seasonal-0.90.0/seasonal/data/inspectdata.rdata |only seasonal-0.90.0/seasonal/inst/doc/seas.Rnw | 2 seasonal-0.90.0/seasonal/inst/doc/seas.pdf |binary seasonal-0.90.0/seasonal/inst/inspect |only seasonal-0.90.0/seasonal/man/SPECS.Rd | 3 seasonal-0.90.0/seasonal/man/checkX13.Rd | 2 seasonal-0.90.0/seasonal/man/cpi.Rd | 2 seasonal-0.90.0/seasonal/man/easter.Rd | 2 seasonal-0.90.0/seasonal/man/exp.Rd | 2 seasonal-0.90.0/seasonal/man/final.Rd | 5 seasonal-0.90.0/seasonal/man/genhol.Rd | 2 seasonal-0.90.0/seasonal/man/identify.seas.Rd | 2 seasonal-0.90.0/seasonal/man/iip.Rd | 2 seasonal-0.90.0/seasonal/man/inspect.Rd | 55 +- seasonal-0.90.0/seasonal/man/na.x13.Rd | 2 seasonal-0.90.0/seasonal/man/out.Rd | 5 seasonal-0.90.0/seasonal/man/outlier.Rd | 2 seasonal-0.90.0/seasonal/man/plot.seas.Rd | 19 seasonal-0.90.0/seasonal/man/qs.Rd | 6 seasonal-0.90.0/seasonal/man/seas.Rd | 12 seasonal-0.90.0/seasonal/man/seasonal-defunct.Rd | 2 seasonal-0.90.0/seasonal/man/seasonal-package.Rd | 2 seasonal-0.90.0/seasonal/man/series.Rd | 18 seasonal-0.90.0/seasonal/man/static.Rd | 5 seasonal-0.90.0/seasonal/man/summary.seas.Rd | 4 seasonal-0.90.0/seasonal/vignettes/README.tex | 57 +- seasonal-0.90.0/seasonal/vignettes/images |only seasonal-0.90.0/seasonal/vignettes/seas.Rnw | 2 seasonal-0.90.0/seasonal/vignettes/seas.tex |only 50 files changed, 756 insertions(+), 391 deletions(-)
Title: Power/Sample Size Calculation for Mediation Analysis
Description: Functions to
calculate power and sample size for testing
(1) mediation effects;
(2) the slope in a simple linear regression;
(3) odds ratio in a simple logistic regression;
(4) mean change for longitudinal study with 2 time points;
(5) interaction effect in 2-way ANOVA; and
(6) the slope in a simple Poisson regression.
Author: Weiliang Qiu <stwxq@channing.harvard.edu>
Maintainer: Weiliang Qiu <stwxq@channing.harvard.edu>
Diff between powerMediation versions 0.2.3 dated 2015-02-23 and 0.2.4 dated 2015-05-08
DESCRIPTION | 11 +++++----- INDEX | 2 + MD5 | 15 ++++++++------ NAMESPACE | 2 + NEWS | 5 ++++ R/functions_poisson.R |only man/powerMediation.Sobel.Rd | 46 +++++++++++++++++++++---------------------- man/powerPoisson.Rd |only man/sizePoisson.Rd |only man/ssMediation.Sobel.Rd | 47 +++++++++++++++++++++++--------------------- 10 files changed, 72 insertions(+), 56 deletions(-)
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