Title: Citations for Knitr Markdown Files
Description: A tool which provides the ability to create dynamic citations
in which the bibliographic information is pulled from the web rather
than having to be entered into a local database such as bibtex ahead of
time. Knitcitations is primarily aimed at authoring in the R markdown
format, and can provide outputs for web-based authoring such as linked
text and tooltips over inline citations. Cite using a DOI, URL, or
bibtex file key. See the package URL for details.
Author: Carl Boettiger [aut, cre]
Maintainer: Carl Boettiger <cboettig@gmail.com>
Diff between knitcitations versions 1.0.5 dated 2014-11-26 and 1.0.6 dated 2015-05-25
knitcitations-1.0.5/knitcitations/tests/testthat/cite.R |only knitcitations-1.0.5/knitcitations/tests/testthat/ref.R |only knitcitations-1.0.6/knitcitations/DESCRIPTION | 13 +-- knitcitations-1.0.6/knitcitations/MD5 | 38 +++++----- knitcitations-1.0.6/knitcitations/NAMESPACE | 2 knitcitations-1.0.6/knitcitations/NEWS | 6 + knitcitations-1.0.6/knitcitations/R/write.bibtex.R | 4 - knitcitations-1.0.6/knitcitations/build/vignette.rds |binary knitcitations-1.0.6/knitcitations/inst/doc/tutorial.R | 2 knitcitations-1.0.6/knitcitations/inst/doc/tutorial.pdf |binary knitcitations-1.0.6/knitcitations/man/bib_metadata.Rd | 3 knitcitations-1.0.6/knitcitations/man/bibliography.Rd | 3 knitcitations-1.0.6/knitcitations/man/cite_options.Rd | 3 knitcitations-1.0.6/knitcitations/man/citep.Rd | 3 knitcitations-1.0.6/knitcitations/man/citet.Rd | 3 knitcitations-1.0.6/knitcitations/man/cleanbib.Rd | 3 knitcitations-1.0.6/knitcitations/man/greycite.Rd | 3 knitcitations-1.0.6/knitcitations/man/read.bibtex.Rd | 3 knitcitations-1.0.6/knitcitations/man/record_as_cited.Rd | 3 knitcitations-1.0.6/knitcitations/man/write.bibtex.Rd | 7 + knitcitations-1.0.6/knitcitations/tests/testthat/test_bib_metadata.R |only knitcitations-1.0.6/knitcitations/tests/testthat/test_cite.R |only 22 files changed, 58 insertions(+), 41 deletions(-)
Title: Solve Generalized Estimating Equations
Description: GEE estimation of the parameters in mean structures with possible correlation between the outcomes. User-specified mean link and variance functions are allowed, along with observation weighting. The "M" in the name "geeM" is meant to emphasize the use of the Matrix package, which allows for an implementation based fully in R.
Author: Lee S. McDaniel and Nick Henderson
Maintainer: Lee S. McDaniel <lmcda4@lsuhsc.edu>
Diff between geeM versions 0.7.3 dated 2015-04-13 and 0.7.4 dated 2015-05-25
DESCRIPTION | 12 MD5 | 8 NAMESPACE | 4 R/geem.R | 931 ++++++++++++++++++++++++++++++------------------------------ R/utility.R | 202 ++++++------- 5 files changed, 586 insertions(+), 571 deletions(-)
Title: Basic Statistical Functions for Package 'ff'
Description: Extends the out of memory vectors of 'ff' with
statistical functions and other utilities to ease their usage.
Author: Edwin de Jonge, Jan Wijffels, Jan van der Laan
Maintainer: Edwin de Jonge <edwindjonge@gmail.com>
Diff between ffbase versions 0.11.3 dated 2014-03-08 and 0.12.0 dated 2015-05-25
ffbase-0.11.3/ffbase/inst |only ffbase-0.11.3/ffbase/tests/test_all.R |only ffbase-0.12.0/ffbase/DESCRIPTION | 17 - ffbase-0.12.0/ffbase/MD5 | 311 ++++++++++++------------ ffbase-0.12.0/ffbase/NAMESPACE | 91 +++++-- ffbase-0.12.0/ffbase/NEWS | 4 ffbase-0.12.0/ffbase/R/Summary_ff.R | 6 ffbase-0.12.0/ffbase/R/as.R | 202 ++++++++------- ffbase-0.12.0/ffbase/R/auxilary.R | 318 ++++++++++++------------- ffbase-0.12.0/ffbase/R/bigglm.R | 8 ffbase-0.12.0/ffbase/R/binned_sum.R | 162 ++++++------ ffbase-0.12.0/ffbase/R/binned_sumsq.R | 155 ++++++------ ffbase-0.12.0/ffbase/R/binned_tabulate.R | 189 +++++++------- ffbase-0.12.0/ffbase/R/byMean.R | 160 ++++++------ ffbase-0.12.0/ffbase/R/bySum.R | 6 ffbase-0.12.0/ffbase/R/chunkify.R | 2 ffbase-0.12.0/ffbase/R/compact.R | 108 ++++---- ffbase-0.12.0/ffbase/R/cumsum.R | 137 +++++----- ffbase-0.12.0/ffbase/R/cut_ff.R | 98 ++++--- ffbase-0.12.0/ffbase/R/date_formatting.R | 54 ++-- ffbase-0.12.0/ffbase/R/diff_ff.R | 65 ++--- ffbase-0.12.0/ffbase/R/droplevels.R | 2 ffbase-0.12.0/ffbase/R/duplicated.R | 155 ++++++------ ffbase-0.12.0/ffbase/R/expand_ffgrid.R | 140 +++++------ ffbase-0.12.0/ffbase/R/extract.R | 6 ffbase-0.12.0/ffbase/R/ffappend.R | 267 ++++++++++---------- ffbase-0.12.0/ffbase/R/ffdfdply.R | 226 ++++++++--------- ffbase-0.12.0/ffbase/R/ffdfwith.R | 144 +++++------ ffbase-0.12.0/ffbase/R/ffifelse.R | 68 ++--- ffbase-0.12.0/ffbase/R/ffmatch.R | 226 ++++++++--------- ffbase-0.12.0/ffbase/R/ffordered.R | 104 ++++---- ffbase-0.12.0/ffbase/R/ffrandom.R | 74 ++--- ffbase-0.12.0/ffbase/R/ffseq.R | 298 +++++++++++------------ ffbase-0.12.0/ffbase/R/ffwhich.R | 166 ++++++------- ffbase-0.12.0/ffbase/R/hist_ff.R | 105 ++++---- ffbase-0.12.0/ffbase/R/ikey.R | 44 +-- ffbase-0.12.0/ffbase/R/isNA.R | 78 +++--- ffbase-0.12.0/ffbase/R/laf_to_ffdf.R | 118 ++++----- ffbase-0.12.0/ffbase/R/logging.R | 66 ++--- ffbase-0.12.0/ffbase/R/mean.R | 69 ++--- ffbase-0.12.0/ffbase/R/merge.R | 231 +++++++++--------- ffbase-0.12.0/ffbase/R/pkg.R | 145 +++++------ ffbase-0.12.0/ffbase/R/quantile_ff.R | 68 ++--- ffbase-0.12.0/ffbase/R/rbind_ffdf.R | 97 +++---- ffbase-0.12.0/ffbase/R/rev_ff.R | 26 +- ffbase-0.12.0/ffbase/R/rle_ff.R | 94 +++---- ffbase-0.12.0/ffbase/R/save_ffdf.R | 4 ffbase-0.12.0/ffbase/R/subset.R | 97 +++---- ffbase-0.12.0/ffbase/R/table_ff.R | 227 ++++++++--------- ffbase-0.12.0/ffbase/R/tabulate_ff.R | 126 ++++----- ffbase-0.12.0/ffbase/R/transform.R | 2 ffbase-0.12.0/ffbase/R/tsum.R | 164 ++++++------ ffbase-0.12.0/ffbase/R/unique.R | 189 +++++++------- ffbase-0.12.0/ffbase/R/with.R | 282 +++++++++++----------- ffbase-0.12.0/ffbase/R/zzz.R | 6 ffbase-0.12.0/ffbase/man/all.ff.Rd | 12 ffbase-0.12.0/ffbase/man/any.ff.Rd | 12 ffbase-0.12.0/ffbase/man/as.Date.ff_vector.Rd | 12 ffbase-0.12.0/ffbase/man/as.character.ff.Rd | 9 ffbase-0.12.0/ffbase/man/as.ffdf.ffdf.Rd | 6 ffbase-0.12.0/ffbase/man/as.ram.ffdf.Rd | 6 ffbase-0.12.0/ffbase/man/bigglm.ffdf.Rd | 27 +- ffbase-0.12.0/ffbase/man/binned_sum.Rd | 17 - ffbase-0.12.0/ffbase/man/binned_sumsq.Rd | 26 -- ffbase-0.12.0/ffbase/man/binned_tabulate.Rd | 29 +- ffbase-0.12.0/ffbase/man/byMean.Rd | 18 - ffbase-0.12.0/ffbase/man/bySum.Rd | 22 - ffbase-0.12.0/ffbase/man/c.ff.Rd | 4 ffbase-0.12.0/ffbase/man/chunkexpr.Rd | 18 - ffbase-0.12.0/ffbase/man/chunkify.Rd | 15 - ffbase-0.12.0/ffbase/man/compact.Rd | 49 +-- ffbase-0.12.0/ffbase/man/condMean.Rd | 15 - ffbase-0.12.0/ffbase/man/condSum.Rd | 15 - ffbase-0.12.0/ffbase/man/cumsum.ff.Rd | 25 - ffbase-0.12.0/ffbase/man/cut.ff.Rd | 21 - ffbase-0.12.0/ffbase/man/diff.ff.Rd | 12 ffbase-0.12.0/ffbase/man/droplevels.ff.Rd | 16 - ffbase-0.12.0/ffbase/man/droplevels.ffdf.Rd | 19 - ffbase-0.12.0/ffbase/man/duplicated.ff.Rd | 44 +-- ffbase-0.12.0/ffbase/man/expand.ffgrid.Rd | 24 - ffbase-0.12.0/ffbase/man/ff_arithmetic.Rd | 29 +- ffbase-0.12.0/ffbase/man/ff_math.Rd | 29 +- ffbase-0.12.0/ffbase/man/ff_ops.Rd | 31 +- ffbase-0.12.0/ffbase/man/ffappend.Rd | 24 - ffbase-0.12.0/ffbase/man/ffbase-package.Rd | 131 ++++------ ffbase-0.12.0/ffbase/man/ffdfappend.Rd | 31 -- ffbase-0.12.0/ffbase/man/ffdfdply.Rd | 38 +- ffbase-0.12.0/ffbase/man/ffdfrbind.fill.Rd | 19 - ffbase-0.12.0/ffbase/man/ffdfwith.Rd | 29 +- ffbase-0.12.0/ffbase/man/ffextract.Rd | 55 +--- ffbase-0.12.0/ffbase/man/ffifelse.Rd | 15 - ffbase-0.12.0/ffbase/man/ffmatch.Rd | 42 +-- ffbase-0.12.0/ffbase/man/ffordered.Rd | 17 - ffbase-0.12.0/ffbase/man/ffrandom.Rd | 34 +- ffbase-0.12.0/ffbase/man/ffrep.int.Rd | 14 - ffbase-0.12.0/ffbase/man/ffseq.Rd | 25 - ffbase-0.12.0/ffbase/man/ffseq_len.Rd | 8 ffbase-0.12.0/ffbase/man/ffwhich.Rd | 14 - ffbase-0.12.0/ffbase/man/format.ff_vector.Rd | 12 ffbase-0.12.0/ffbase/man/grouprunningcumsum.Rd | 15 - ffbase-0.12.0/ffbase/man/hist.ff.Rd | 17 - ffbase-0.12.0/ffbase/man/hist2d.ff.Rd | 2 ffbase-0.12.0/ffbase/man/ikey.Rd | 16 - ffbase-0.12.0/ffbase/man/is.na.ff.Rd | 16 - ffbase-0.12.0/ffbase/man/laf_to_ffdf.Rd | 21 - ffbase-0.12.0/ffbase/man/load.ffdf.Rd | 17 - ffbase-0.12.0/ffbase/man/mean.ff.Rd | 12 ffbase-0.12.0/ffbase/man/merge.ffdf.Rd | 64 +---- ffbase-0.12.0/ffbase/man/min.ff.Rd | 15 - ffbase-0.12.0/ffbase/man/move.ffdf.Rd | 20 - ffbase-0.12.0/ffbase/man/pack.ffdf.Rd | 12 ffbase-0.12.0/ffbase/man/pkg-deprecated.Rd | 19 - ffbase-0.12.0/ffbase/man/quantile.ff.Rd | 27 -- ffbase-0.12.0/ffbase/man/rle_ff.Rd | 28 +- ffbase-0.12.0/ffbase/man/save.ffdf.Rd | 59 +--- ffbase-0.12.0/ffbase/man/set_ffbase_logging.Rd | 7 ffbase-0.12.0/ffbase/man/subset.ff.Rd | 13 - ffbase-0.12.0/ffbase/man/sum.ff.Rd | 15 - ffbase-0.12.0/ffbase/man/table.Rd | 28 +- ffbase-0.12.0/ffbase/man/tabulate.ff.Rd | 12 ffbase-0.12.0/ffbase/man/transform.ffdf.Rd | 16 - ffbase-0.12.0/ffbase/man/unique.ff.Rd | 26 -- ffbase-0.12.0/ffbase/man/unpack.ffdf.Rd | 18 - ffbase-0.12.0/ffbase/man/with.ffdf.Rd | 32 +- ffbase-0.12.0/ffbase/man/within.ffdf.Rd | 17 - ffbase-0.12.0/ffbase/tests/testthat |only ffbase-0.12.0/ffbase/tests/testthat.R |only 127 files changed, 3881 insertions(+), 3940 deletions(-)
Title: Unconditional Exact Test
Description: Performs unconditional exact tests and power calculations for 2x2 contingency
tables. Unconditional exact tests are often more powerful than conditional exact tests and asymptotic tests.
Author: Peter Calhoun
Maintainer: Peter Calhoun <calhoun.peter@gmail.com>
Diff between Exact versions 1.5 dated 2015-03-28 and 1.6 dated 2015-05-25
DESCRIPTION | 8 ++++---- MD5 | 6 +++--- R/binomialCode.R | 5 +++-- man/Exact-package.Rd | 4 ++-- 4 files changed, 12 insertions(+), 11 deletions(-)
Title: Fitting Linear and Generalized Linear Models to Large Data Sets
Description: Fitting linear models and generalized linear models to large data sets by updating algorithms.
Author: Marco Enea, with contributions by Ronen Meiri and Tomer Kalimi on behalf of DMWay Analytics LTD.
Maintainer: Marco Enea <emarco76@libero.it>
Diff between speedglm versions 0.2-1.0 dated 2014-10-22 and 0.3 dated 2015-05-25
DESCRIPTION | 18 - MD5 | 34 +- NAMESPACE | 23 + NEWS | 54 ++- R/miscellanea.r | 198 +++++++------- R/predict.r |only R/speedglm.r | 494 ++++++++++++++++++------------------ R/speedlm.r | 603 ++++++++++++++++++++++++++------------------ R/summary.speedglm.r | 259 +++++++++--------- R/summary.speedlm.r | 526 +++++++++++++++++++++++++++----------- R/uncommented.r | 115 ++++---- man/add1&drop1.Rd |only man/miscellanea-Internal.Rd | 2 man/predict.speedglm.Rd |only man/predict.speedlm.Rd |only man/speedglm-package.rd | 14 - man/speedglm.Rd | 422 ++++++++++++++++-------------- man/speedlm.Rd | 333 ++++++++++++++---------- man/summary.speedglm.Rd | 138 +++++----- man/summary.speedlm.Rd | 131 ++++----- 20 files changed, 1930 insertions(+), 1434 deletions(-)
Title: Read and Write 'JSON-stat' Data Sets
Description: Read and write the 'JSON-stat' format (http://json-stat.org) to and
from (lists of) R data frames. Not all features are supported, especially
the extensive metadata features of 'JSON-stat'.
Author: Aaron Schumacher <ajschumacher@gmail.com>, Håkon Malmedal
Maintainer: Aaron Schumacher <ajschumacher@gmail.com>
Diff between rjstat versions 0.2 dated 2014-09-29 and 0.2.1 dated 2015-05-25
DESCRIPTION | 14 ++-- LICENSE | 2 MD5 | 27 +++++--- NAMESPACE | 2 R/rjstat.R | 111 ++++++++++++++--------------------- README.md | 17 ++++- man/fromJSONstat.Rd | 3 man/rjstat.Rd | 3 man/toJSONstat.Rd | 3 tests/testthat/dataset.json | 65 +++++++++++++++++--- tests/testthat/test-attributes.R |only tests/testthat/test-columns.R |only tests/testthat/test-datasets.R |only tests/testthat/test-factors.R |only tests/testthat/test-input.R | 21 ++++++ tests/testthat/test-output.R | 122 ++++++++------------------------------- tests/testthat/test-values.R |only 17 files changed, 190 insertions(+), 200 deletions(-)
Title: The Multivariate Normal and t Distributions
Description: Functions are provided for computing the density and the
distribution function of multivariate normal and "t" random variables,
and for generating random vectors sampled from these distributions.
Probabilities are computed via a non-Monte Carlo method. Different routines
are used for the case d=1, d=2, d>2, if d denotes the number of dimensions.
Author: Fortran code by Alan Genz, R code by Adelchi Azzalini
Maintainer: Adelchi Azzalini <adelchi.azzalini@unipd.it>
Diff between mnormt versions 1.5-2 dated 2015-04-03 and 1.5-3 dated 2015-05-25
mnormt-1.5-2/mnormt/INDEX |only mnormt-1.5-3/mnormt/DESCRIPTION | 8 ++++---- mnormt-1.5-3/mnormt/MD5 | 11 +++++------ mnormt-1.5-3/mnormt/NEWS | 4 +++- mnormt-1.5-3/mnormt/R/mnormt.R | 8 +++++--- mnormt-1.5-3/mnormt/man/dmnorm.Rd | 4 ++-- mnormt-1.5-3/mnormt/man/dmt.Rd | 6 ++---- 7 files changed, 21 insertions(+), 20 deletions(-)
Title: R Interface to the PX-Web/PC-Axis API
Description: Generic interface for the PX-Web/PC-Axis API. The PX-Web/PC-Axis
API is used by organizations such as Statistics Sweden and Statistics
Finland to disseminate data. The R package can interact with all
PX-Web/PC-Axis APIs to fetch information about the data hierarchy, extract
metadata and extract and parse statistics to R data.frame format. PX-Web is
a solution to disseminate PC-Axis data files in dynamic tables on the web.
Since 2013 PX-Web contains an API to disseminate PC-Axis files.
Author: Mans Magnusson, Leo Lahti, Love Hansson
Maintainer: Mans Magnusson <mons.magnusson@gmail.com>
Diff between pxweb versions 0.5.5 dated 2015-03-04 and 0.5.54 dated 2015-05-25
DESCRIPTION | 8 +- MD5 | 88 ++++++++++++++++---------------- NAMESPACE | 2 inst/doc/pxweb.R | 4 - inst/extras/build.cran.sh | 10 +-- man/api_catalogue.Rd | 3 - man/api_parameters.Rd | 3 - man/api_timer.Rd | 3 - man/base_url.Rd | 3 - man/buildPath.Rd | 3 - man/calc_dim_type.Rd | 3 - man/calculate_data_dim.Rd | 3 - man/checkForLevels.Rd | 3 - man/check_new_pxweb_apis.Rd | 3 - man/choose_pxweb_api.Rd | 3 - man/choose_pxweb_database_url.Rd | 3 - man/clean_pxweb.Rd | 3 - man/create_batch_list.Rd | 3 - man/deparseLevels.Rd | 3 - man/download_pxweb.Rd | 3 - man/findData.input.Rd | 3 - man/getContent.Rd | 3 - man/get_api_index.Rd | 3 - man/get_api_list.Rd | 3 - man/get_api_list_remote.Rd | 3 - man/get_dim_size.Rd | 3 - man/get_github_api_urls.Rd | 3 - man/get_pxweb_data.Rd | 3 - man/get_pxweb_dims.Rd | 3 - man/get_pxweb_levels.Rd | 3 - man/get_pxweb_metadata.Rd | 3 - man/interactive_pxweb.Rd | 3 - man/print.api_parameters.Rd | 3 - man/pxweb.Rd | 3 - man/pxweb_api-class.Rd | 3 - man/test_pxweb_api.Rd | 3 - man/test_pxweb_api_get_data.Rd | 3 - man/test_pxweb_api_get_node_metadata.Rd | 3 - man/test_pxweb_api_get_nodes.Rd | 3 - man/text_to_url.Rd | 3 - man/update_pxweb_apis.Rd | 3 - man/write_api_list.Rd | 3 - tests/testthat/test-apis_in_catalogue.R | 9 +-- tests/testthat_api_in_catalogue.R | 2 vignettes/pxweb.Rmd | 4 - 45 files changed, 137 insertions(+), 101 deletions(-)
Title: Discovering Multiple, Statistically-Equivalent Signatures
Description: Feature selection methods for identifying minimal, statistically-equivalent and equally-predictive feature subsets. MXM stands for "Mens eX Machina", meaning "Mind from the Machine" in Latin.
Author: Ioannis Tsamardinos, Vincenzo Lagani, Giorgos Borboudakis, Giorgos Athineou
Maintainer: Giorgos Athineou <athineou@ics.forth.gr>
Diff between MXM versions 0.3 dated 2015-02-12 and 0.3.1 dated 2015-05-25
DESCRIPTION | 10 +++++----- MD5 | 20 ++++++++++---------- NAMESPACE | 26 +++++++++++--------------- R/SES.R | 6 +++--- R/censIndLR.R | 10 +++++----- R/gSquare.R | 4 ++-- R/testIndLogistic.R | 16 ++++++++-------- man/SES.Rd | 2 +- man/censIndLR.Rd | 2 ++ man/gSquare.Rd | 2 ++ man/testIndLogistic.Rd | 6 +++--- 11 files changed, 52 insertions(+), 52 deletions(-)
Title: Permits *apply() Style Dispatch for HPC
Description: Function of apply style using MPI provides better HPC environment on R(works fast on HPC).
and this package supports long vector, can deal with slightly big data.
Author: Junji NAKANO <nakanoj@ism.ac.jp> and Eiji NAKAMA<nakama@com-one.com>
Maintainer: Ei-ji Nakama <nakama@com-one.com>
Diff between Rhpc versions 0.14-261 dated 2014-09-19 and 0.15-145 dated 2015-05-25
ChangeLog | 10 ++++ DESCRIPTION | 16 ++---- MD5 | 35 ++++++++------ R/Rhpc.R | 2 README |only configure | 48 ++++++++++++++------ configure.ac | 32 ++++++++++--- configure.win |only man/Rhpc-package.Rd | 2 src/Makevars.in | 7 -- src/Makevars.win |only src/RhpcMPI.c | 76 +++++++++++++++++--------------- src/common/Rhpc.h | 4 + src/common/config.h.in | 2 src/windows |only src/worker/Makefile.in | 5 -- src/worker/Makefile.win |only src/worker/Rhpc.cmd.in |only src/worker/Rhpc.in | 2 src/worker/RhpcSpawn.in | 2 src/worker/RhpcWin.cmd.in |only src/worker/RhpcWorker.c | 108 +++++++++++++++++++++++----------------------- 22 files changed, 205 insertions(+), 146 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2012-07-23 1.0-1
Title: Tools for Partial Least Squares Path Modeling (PLS-PM)
Description: Partial Least Squares Path Modeling (PLS-PM)
analysis for both metric and
non-metric data, as well as REBUS analysis.
Author: Gaston Sanchez [aut, cre],
Laura Trinchera [aut],
Giorgio Russolillo [aut]
Maintainer: Gaston Sanchez <gaston.stat@gmail.com>
Diff between plspm versions 0.4.2 dated 2015-02-20 and 0.4.7 dated 2015-05-25
DESCRIPTION | 28 +++---- MD5 | 51 +++++++------- NAMESPACE | 6 + NEWS | 49 +++++++++++++ R/get_boots.r | 13 ++- R/get_dummies.r | 6 + R/get_weights_nonmetric.r | 80 +++++++++++++++------- R/innerplot.r | 6 - R/it.reb.r | 2 R/outerplot.r | 3 R/plspm-package.r |only R/plspm.r | 11 +-- R/rebus.pls.r | 6 - R/res.clus.r | 2 inst/doc/plspm_introduction.R | 138 ++++++++++++++++----------------------- inst/doc/plspm_introduction.Rnw | 29 ++++---- inst/doc/plspm_introduction.pdf |binary man/cereals.Rd | 2 man/college.Rd | 3 man/futbol.Rd | 3 man/get_dummy.Rd | 4 - man/it.reb.Rd | 2 man/offense.Rd | 3 man/plspm.Rd | 33 +++++++-- man/rebus.pls.Rd | 6 - man/spainfoot.Rd | 3 vignettes/plspm_introduction.Rnw | 29 ++++---- 27 files changed, 300 insertions(+), 218 deletions(-)
Title: Easy Handling of and Access to Files Organized in Structured
Directories
Description: A file set refers to a set of files located in one or more directories on the file system. This package provides classes and methods to locate, setup, subset, navigate and iterate such sets. The API is designed such that these classes can be extended via inheritance to provide a richer API for special file formats. Moreover, a specific name format is defined such that filenames and directories can be considered to have full names which consists of a name followed by comma-separated tags. This adds additional flexibility to identify file sets and individual files. NOTE: This package's API should be considered to be in an beta stage. Its main purpose is currently to support the aroma.* packages, where it is one of the main core components; if you decide to build on top of this package, please contact the author first.
Author: Henrik Bengtsson [aut, cre, cph]
Maintainer: Henrik Bengtsson <henrikb@braju.com>
Diff between R.filesets versions 2.7.1 dated 2015-04-28 and 2.7.2 dated 2015-05-25
DESCRIPTION | 10 +-- MD5 | 38 ++++++------ NAMESPACE | 1 NEWS | 15 +++++ R/GenericDataFile.R | 14 +++- R/GenericDataFileSet.PARALLEL.R | 13 ++-- R/GenericDataFileSet.R | 110 +++++++++++++++++++++++++++++++++---- R/TabularTextFile.R | 18 +++++- man/ChecksumFileSet.Rd | 2 man/GenericDataFileSet.Rd | 3 - man/GenericTabularFileSet.Rd | 2 man/RDataFileSet.Rd | 2 man/RdsFileSet.Rd | 2 man/TabularTextFileSet.Rd | 2 man/dsApply.GenericDataFileSet.Rd | 7 +- man/getNames.GenericDataFileSet.Rd | 8 ++ man/linkTo.GenericDataFile.Rd | 7 ++ tests/GenericDataFileSet,dsApply.R | 5 + tests/GenericDataFileSet.R | 19 ++++++ tests/TabularTextFile,extend.R |only tests/readDataFrame.R |only 21 files changed, 220 insertions(+), 58 deletions(-)
Title: Mixture and Flexible Discriminant Analysis
Description: Mixture and flexible discriminant analysis, multivariate
adaptive regression splines (MARS), BRUTO, ...
Author: S original by Trevor Hastie & Robert Tibshirani. Original R port by Friedrich Leisch, Kurt Hornik and Brian D. Ripley.
Maintainer: Trevor Hastie <hastie@stanford.edu>
Diff between mda versions 0.4-6 dated 2015-05-10 and 0.4-7 dated 2015-05-25
DESCRIPTION | 8 ++++---- MD5 | 6 +++--- src/dmarss.f | 1 + src/rat/dmarss.r | 3 ++- 4 files changed, 10 insertions(+), 8 deletions(-)
Title: Package for Environmental Statistics, Including US EPA Guidance
Description: Graphical and statistical analyses of environmental data, with
focus on analyzing chemical concentrations and physical parameters, usually in
the context of mandated environmental monitoring. Major environmental
statistical methods found in the literature and regulatory guidance documents,
with extensive help that explains what these methods do, how to use them,
and where to find them in the literature. Numerous built-in data sets from
regulatory guidance documents and environmental statistics literature. Includes
scripts reproducing analyses presented in the book "EnvStats: An R Package for
Environmental Statistics" (Millard, 2013, Springer).
Author: Steven P. Millard <EnvStats@ProbStatInfo.com>
Maintainer: Steven P. Millard <EnvStats@ProbStatInfo.com>
Diff between EnvStats versions 2.0.0 dated 2015-03-09 and 2.0.1 dated 2015-05-25
DESCRIPTION | 8 MD5 | 212 ++++++++++++------------ NEWS | 16 + R/errorBar.R | 62 ++++--- R/stripChart.default.R | 18 +- R/summaryStats.formula.R | 7 data/Air.df.rda |binary data/Benthic.df.rda |binary data/Distribution.df.rda |binary data/EPA.02d.Ex.2.ug.per.L.vec.rda |binary data/EPA.02d.Ex.4.mg.per.kg.vec.rda |binary data/EPA.02d.Ex.6.mg.per.kg.vec.rda |binary data/EPA.02d.Ex.9.mg.per.L.vec.rda |binary data/EPA.09.Ex.10.1.nickel.df.rda |binary data/EPA.09.Ex.11.1.arsenic.df.rda |binary data/EPA.09.Ex.12.1.ccl4.df.rda |binary data/EPA.09.Ex.12.4.naphthalene.df.rda |binary data/EPA.09.Ex.13.1.iron.df.rda |binary data/EPA.09.Ex.14.1.manganese.df.rda |binary data/EPA.09.Ex.14.3.alkalinity.df.rda |binary data/EPA.09.Ex.14.4.arsenic.df.rda |binary data/EPA.09.Ex.14.8.df.rda |binary data/EPA.09.Ex.15.1.manganese.df.rda |binary data/EPA.09.Ex.16.1.sulfate.df.rda |binary data/EPA.09.Ex.16.2.benzene.df.rda |binary data/EPA.09.Ex.16.4.copper.df.rda |binary data/EPA.09.Ex.16.5.PCE.df.rda |binary data/EPA.09.Ex.17.1.loglead.df.rda |binary data/EPA.09.Ex.17.2.toluene.df.rda |binary data/EPA.09.Ex.17.3.chrysene.df.rda |binary data/EPA.09.Ex.17.3.log.chrysene.df.rda |binary data/EPA.09.Ex.17.4.copper.df.rda |binary data/EPA.09.Ex.17.5.chloride.df.rda |binary data/EPA.09.Ex.17.6.sulfate.df.rda |binary data/EPA.09.Ex.17.7.sodium.df.rda |binary data/EPA.09.Ex.18.1.arsenic.df.rda |binary data/EPA.09.Ex.18.2.chrysene.df.rda |binary data/EPA.09.Ex.18.3.TCE.df.rda |binary data/EPA.09.Ex.18.4.xylene.df.rda |binary data/EPA.09.Ex.19.1.sulfate.df.rda |binary data/EPA.09.Ex.19.2.chloride.df.rda |binary data/EPA.09.Ex.19.5.mercury.df.rda |binary data/EPA.09.Ex.20.1.nickel.df.rda |binary data/EPA.09.Ex.21.1.aldicarb.df.rda |binary data/EPA.09.Ex.21.2.benzene.df.rda |binary data/EPA.09.Ex.21.5.beryllium.df.rda |binary data/EPA.09.Ex.21.6.nitrate.df.rda |binary data/EPA.09.Ex.21.7.TCE.df.rda |binary data/EPA.09.Ex.22.1.VC.df.rda |binary data/EPA.09.Ex.22.2.Specific.Conductance.df.rda |binary data/EPA.09.Ex.6.3.sulfate.df.rda |binary data/EPA.09.Ex.7.1.arsenic.df.rda |binary data/EPA.09.Table.9.1.TCE.df.rda |binary data/EPA.09.Table.9.3.df.rda |binary data/EPA.09.Table.9.4.nickel.vec.rda |binary data/EPA.89b.aldicarb1.df.rda |binary data/EPA.89b.aldicarb2.df.rda |binary data/EPA.89b.benzene.df.rda |binary data/EPA.89b.cadmium.df.rda |binary data/EPA.89b.chlordane1.df.rda |binary data/EPA.89b.chlordane2.df.rda |binary data/EPA.89b.edb.df.rda |binary data/EPA.89b.lead.df.rda |binary data/EPA.89b.loglead.df.rda |binary data/EPA.89b.manganese.df.rda |binary data/EPA.89b.sulfate.df.rda |binary data/EPA.89b.t29.df.rda |binary data/EPA.89b.toc.vec.rda |binary data/EPA.92c.arsenic1.df.rda |binary data/EPA.92c.arsenic2.df.rda |binary data/EPA.92c.arsenic3.df.rda |binary data/EPA.92c.benzene1.df.rda |binary data/EPA.92c.benzene2.df.rda |binary data/EPA.92c.ccl4.df.rda |binary data/EPA.92c.chrysene.df.rda |binary data/EPA.92c.copper1.df.rda |binary data/EPA.92c.copper2.df.rda |binary data/EPA.92c.lognickel1.df.rda |binary data/EPA.92c.nickel1.df.rda |binary data/EPA.92c.nickel2.df.rda |binary data/EPA.92c.toluene.df.rda |binary data/EPA.92c.zinc.df.rda |binary data/EPA.92d.chromium.df.rda |binary data/EPA.92d.chromium.vec.rda |binary data/EPA.94b.lead.df.rda |binary data/EPA.94b.tccb.df.rda |binary data/EPA.97.cadmium.111.df.rda |binary data/Environmental.df.rda |binary data/Gibbons.et.al.09.Alkilinity.vec.rda |binary data/Gibbons.et.al.09.Vinyl.Chloride.vec.rda |binary data/Graham.et.al.75.etu.df.rda |binary data/Helsel.Cohn.88.app.b.df.rda |binary data/Helsel.Cohn.88.silver.df.rda |binary data/Lin.Evans.80.df.rda |binary data/Millard.Deverel.88.df.rda |binary data/Modified.TcCB.df.rda |binary data/NIOSH.89.air.lead.vec.rda |binary data/Olympic.NH4.df.rda |binary data/Ozone.NE.df.rda |binary data/Refinery.CO.df.rda |binary data/Skagit.NH3_N.df.rda |binary data/Total.P.df.rda |binary inst/CITATION | 2 inst/doc/EnvStats-manual.pdf |binary man/EnvStats-package.Rd | 4 man/stripChart.Rd | 17 + man/summaryStats.Rd | 11 + 107 files changed, 213 insertions(+), 144 deletions(-)